Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: XKRY Sequence: fasta or formatted (117aa) NCBI GI: 50363369
Description:

XK, Kell blood group complex subunit-related, Y-linked

Referenced in:

Hematopoiesis and Erythrocytes
Y-linked Genes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0          7           2
 C cysteine            2.6          3           1
 D aspartate           2.6          3           2
 E glutamate           0.9          1           1
 F phenylalanine       7.7          9           2
 G glycine             5.1          6           1
 H histidine           3.4          4           1
 I isoleucine         12.8         15           2
 K lysine              5.1          6           1
 L leucine            14.5         17           3
 M methionine          2.6          3           1
 N asparagine          5.1          6           2
 P proline             4.3          5           1
 Q glutamine           1.7          2           1
 R arginine            0.9          1           1
 S serine             10.3         12           2
 T threonine           4.3          5           1
 V valine              6.0          7           2
 W tryptophan          1.7          2           1
 Y tyrosine            2.6          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   XK, Kell blood group complex subunit-related, Y-link... 
XKRY2                 1.000   XK, Kell blood group complex subunit-related, Y-link...
XKR3                  0.412   X Kell blood group precursor-related family, member...
LOC100289232          0.408   PREDICTED: hypothetical protein XP_002343935 
XKRX                  0.232   XK, Kell blood group complex subunit-related, X-lin...
XK                    0.180   membrane transport protein XK 
ATP9A                 0.014   ATPase, class II, type 9A 
SYPL1                 0.009   synaptophysin-like 1 isoform b 
SYPL1                 0.009   synaptophysin-like 1 isoform a 
LOC100130472          0.005   PREDICTED: hypothetical protein 
C6orf70               0.005   hypothetical protein LOC55780 
OR10A4                0.005   olfactory receptor, family 10, subfamily A, member 4...
XKR8                  0.005   XK, Kell blood group complex subunit-related family,...
TEX261                0.005   testis expressed sequence 261 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press