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Search of human proteins with 239749401
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749401 PREDICTED: hypothetical protein XP_002347030 [Homo
sapiens]
(158 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749401 PREDICTED: hypothetical protein XP_002347030 [Homo ... 331 2e-91
gi|239743536 PREDICTED: hypothetical protein XP_002342871 [Homo ... 331 2e-91
gi|239754860 PREDICTED: similar to ribosomal protein 10 [Homo sa... 329 7e-91
gi|239756779 PREDICTED: similar to hCG1643102 [Homo sapiens] 162 1e-40
gi|239745753 PREDICTED: hypothetical protein XP_002343545 [Homo ... 162 1e-40
gi|239751260 PREDICTED: hypothetical protein XP_002347772 [Homo ... 161 2e-40
gi|223890243 ribosomal protein L10 [Homo sapiens] 121 2e-28
gi|18152783 ribosomal protein L10-like protein [Homo sapiens] 120 6e-28
gi|169162466 PREDICTED: similar to hCG1644589 [Homo sapiens] 117 5e-27
gi|169162197 PREDICTED: similar to hCG1644589 [Homo sapiens] 117 5e-27
gi|169161235 PREDICTED: hypothetical protein LOC390998 [Homo sap... 117 5e-27
gi|169173188 PREDICTED: similar to hCG1644362 [Homo sapiens] 108 2e-24
gi|239749350 PREDICTED: similar to hCG1644362 [Homo sapiens] 108 2e-24
gi|239743486 PREDICTED: hypothetical protein LOC645960 [Homo sap... 108 2e-24
gi|11056061 thymosin, beta 4 [Homo sapiens] 70 1e-12
gi|34013530 thymosin-like 3 [Homo sapiens] 68 4e-12
gi|4759244 thymosin, beta 4, Y chromosome [Homo sapiens] 65 2e-11
gi|167555119 thymosin beta15b [Homo sapiens] 55 2e-08
gi|11496273 thymosin-like 8 [Homo sapiens] 55 2e-08
gi|10863895 thymosin, beta 10 [Homo sapiens] 54 4e-08
gi|239754119 PREDICTED: hypothetical protein [Homo sapiens] 37 0.007
gi|239748631 PREDICTED: hypothetical protein XP_002346748 [Homo ... 37 0.007
gi|239742658 PREDICTED: hypothetical protein XP_002342605 [Homo ... 37 0.007
gi|169183848 PREDICTED: similar to thymosin, beta 10 [Homo sapiens] 36 0.012
gi|169179692 PREDICTED: similar to thymosin, beta 10 [Homo sapiens] 36 0.012
gi|169180100 PREDICTED: similar to thymosin, beta 10 [Homo sapiens] 36 0.012
gi|197927454 DEK oncogene isoform 2 [Homo sapiens] 30 1.1
gi|4503249 DEK oncogene isoform 1 [Homo sapiens] 30 1.1
gi|24475859 zinc finger protein 101 [Homo sapiens] 28 3.3
gi|119393899 GLI-Kruppel family member GLI3 [Homo sapiens] 27 5.6
>gi|239749401 PREDICTED: hypothetical protein XP_002347030 [Homo
sapiens]
Length = 158
Score = 331 bits (848), Expect = 2e-91
Identities = 158/158 (100%), Positives = 158/158 (100%)
Query: 1 MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLF 60
MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLF
Sbjct: 1 MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLF 60
Query: 61 LVWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSICTKL 120
LVWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSICTKL
Sbjct: 61 LVWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSICTKL 120
Query: 121 QNKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE 158
QNKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE
Sbjct: 121 QNKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE 158
>gi|239743536 PREDICTED: hypothetical protein XP_002342871 [Homo
sapiens]
Length = 158
Score = 331 bits (848), Expect = 2e-91
Identities = 158/158 (100%), Positives = 158/158 (100%)
Query: 1 MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLF 60
MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLF
Sbjct: 1 MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLF 60
Query: 61 LVWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSICTKL 120
LVWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSICTKL
Sbjct: 61 LVWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSICTKL 120
Query: 121 QNKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE 158
QNKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE
Sbjct: 121 QNKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE 158
>gi|239754860 PREDICTED: similar to ribosomal protein 10 [Homo
sapiens]
Length = 281
Score = 329 bits (843), Expect = 7e-91
Identities = 157/157 (100%), Positives = 157/157 (100%)
Query: 2 SDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLFL 61
SDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLFL
Sbjct: 125 SDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLFL 184
Query: 62 VWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSICTKLQ 121
VWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSICTKLQ
Sbjct: 185 VWVALRVLGDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSICTKLQ 244
Query: 122 NKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE 158
NKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE
Sbjct: 245 NKEHVIEAPCRAKFKFPGHQKIHISKKWGFTKFNVDE 281
>gi|239756779 PREDICTED: similar to hCG1643102 [Homo sapiens]
Length = 186
Score = 162 bits (409), Expect = 1e-40
Identities = 90/131 (68%), Positives = 97/131 (74%), Gaps = 4/131 (3%)
Query: 28 PQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLFLVWVALRVLGDRPFKCTFMSLTLHYPR 87
P E E+E +CAMAANSSFL V LFL WVALR LGDRPFKC FMSLTLHYP+
Sbjct: 59 PFSGAEHEEREVGRTWCAMAANSSFLVRVRRLFLGWVALRDLGDRPFKCMFMSLTLHYPQ 118
Query: 88 CRLETGIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHIS 146
CRL+T + GKPQGTVARVHIGQV S+ TKLQNK+ VIE CRAKFK G QKI IS
Sbjct: 119 CRLQT---DSLGKPQGTVARVHIGQVIMSMRTKLQNKQLVIEDLCRAKFKLLGCQKIRIS 175
Query: 147 KKWGFTKFNVD 157
KKW FTKF VD
Sbjct: 176 KKWCFTKFKVD 186
>gi|239745753 PREDICTED: hypothetical protein XP_002343545 [Homo
sapiens]
Length = 186
Score = 162 bits (409), Expect = 1e-40
Identities = 90/131 (68%), Positives = 97/131 (74%), Gaps = 4/131 (3%)
Query: 28 PQPSKEWIEQEKQAGFCAMAANSSFLGGVHGLFLVWVALRVLGDRPFKCTFMSLTLHYPR 87
P E E+E +CAMAANSSFL V LFL WVALR LGDRPFKC FMSLTLHYP+
Sbjct: 59 PFSGAEHEEREVGRTWCAMAANSSFLVRVRRLFLGWVALRDLGDRPFKCMFMSLTLHYPQ 118
Query: 88 CRLETGIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHIS 146
CRL+T + GKPQGTVARVHIGQV S+ TKLQNK+ VIE CRAKFK G QKI IS
Sbjct: 119 CRLQT---DSLGKPQGTVARVHIGQVIMSMRTKLQNKQLVIEDLCRAKFKLLGCQKIRIS 175
Query: 147 KKWGFTKFNVD 157
KKW FTKF VD
Sbjct: 176 KKWCFTKFKVD 186
>gi|239751260 PREDICTED: hypothetical protein XP_002347772 [Homo
sapiens]
Length = 180
Score = 161 bits (407), Expect = 2e-40
Identities = 88/124 (70%), Positives = 97/124 (78%), Gaps = 6/124 (4%)
Query: 37 QEKQAG--FCAMAANSSFLGGVHGLFLVWVALRVLGDRPFKCTFMSLTLHYPRCRLETGI 94
+E++ G +CAMAANSSFL V LFL WVALR LGDRPFKC FMSLTLHYP+CRL+T
Sbjct: 60 EEREVGRTWCAMAANSSFLVRVRRLFLGWVALRDLGDRPFKCMFMSLTLHYPQCRLQT-- 117
Query: 95 QGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHISKKWGFTK 153
+ GKPQGTVARVHIGQV S+ TKLQNK+ VIE CRAKFK G QKI ISKKW FTK
Sbjct: 118 -DSLGKPQGTVARVHIGQVIMSMRTKLQNKQLVIEDLCRAKFKLLGCQKIRISKKWCFTK 176
Query: 154 FNVD 157
F VD
Sbjct: 177 FKVD 180
>gi|223890243 ribosomal protein L10 [Homo sapiens]
Length = 214
Score = 121 bits (304), Expect = 2e-28
Identities = 61/71 (85%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
Query: 89 RLETGIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHISK 147
RL+TG++GAFGKPQGTVARVHIGQV SI TKLQNKEHVIEA RAKFKFPG QKIHISK
Sbjct: 110 RLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISK 169
Query: 148 KWGFTKFNVDE 158
KWGFTKFN DE
Sbjct: 170 KWGFTKFNADE 180
>gi|18152783 ribosomal protein L10-like protein [Homo sapiens]
Length = 214
Score = 120 bits (300), Expect = 6e-28
Identities = 60/71 (84%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
Query: 89 RLETGIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHISK 147
RL+TG++GAFGKPQGTVARVHIGQV SI TKLQN+EHVIEA RAKFKFPG QKIHISK
Sbjct: 110 RLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNEEHVIEALRRAKFKFPGRQKIHISK 169
Query: 148 KWGFTKFNVDE 158
KWGFTKFN DE
Sbjct: 170 KWGFTKFNADE 180
>gi|169162466 PREDICTED: similar to hCG1644589 [Homo sapiens]
Length = 150
Score = 117 bits (292), Expect = 5e-27
Identities = 58/72 (80%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
Query: 88 CRLETGIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHIS 146
CRL+TG+Q AFGKPQGTVARVHIGQV I TKLQNKEHVI A R FKFPGHQK+HIS
Sbjct: 45 CRLQTGMQVAFGKPQGTVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHIS 104
Query: 147 KKWGFTKFNVDE 158
KKWGFTKFN DE
Sbjct: 105 KKWGFTKFNADE 116
>gi|169162197 PREDICTED: similar to hCG1644589 [Homo sapiens]
Length = 150
Score = 117 bits (292), Expect = 5e-27
Identities = 58/72 (80%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
Query: 88 CRLETGIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHIS 146
CRL+TG+Q AFGKPQGTVARVHIGQV I TKLQNKEHVI A R FKFPGHQK+HIS
Sbjct: 45 CRLQTGMQVAFGKPQGTVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHIS 104
Query: 147 KKWGFTKFNVDE 158
KKWGFTKFN DE
Sbjct: 105 KKWGFTKFNADE 116
>gi|169161235 PREDICTED: hypothetical protein LOC390998 [Homo
sapiens]
Length = 150
Score = 117 bits (292), Expect = 5e-27
Identities = 58/72 (80%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
Query: 88 CRLETGIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIHIS 146
CRL+TG+Q AFGKPQGTVARVHIGQV I TKLQNKEHVI A R FKFPGHQK+HIS
Sbjct: 45 CRLQTGMQVAFGKPQGTVARVHIGQVIMFIHTKLQNKEHVIGALHRVTFKFPGHQKVHIS 104
Query: 147 KKWGFTKFNVDE 158
KKWGFTKFN DE
Sbjct: 105 KKWGFTKFNADE 116
>gi|169173188 PREDICTED: similar to hCG1644362 [Homo sapiens]
Length = 226
Score = 108 bits (269), Expect = 2e-24
Identities = 54/74 (72%), Positives = 59/74 (79%), Gaps = 3/74 (4%)
Query: 88 CRLET--GIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIH 144
C +E I+GAF KPQG VARVHIGQV SICTKLQNKEHVIEA C+A FKFPG Q IH
Sbjct: 20 CSMENVASIRGAFEKPQGAVARVHIGQVIMSICTKLQNKEHVIEALCKANFKFPGRQNIH 79
Query: 145 ISKKWGFTKFNVDE 158
S+KW FTKF+VDE
Sbjct: 80 FSEKWDFTKFSVDE 93
>gi|239749350 PREDICTED: similar to hCG1644362 [Homo sapiens]
Length = 226
Score = 108 bits (269), Expect = 2e-24
Identities = 54/74 (72%), Positives = 59/74 (79%), Gaps = 3/74 (4%)
Query: 88 CRLET--GIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIH 144
C +E I+GAF KPQG VARVHIGQV SICTKLQNKEHVIEA C+A FKFPG Q IH
Sbjct: 20 CSMENVASIRGAFEKPQGAVARVHIGQVIMSICTKLQNKEHVIEALCKANFKFPGRQNIH 79
Query: 145 ISKKWGFTKFNVDE 158
S+KW FTKF+VDE
Sbjct: 80 FSEKWDFTKFSVDE 93
>gi|239743486 PREDICTED: hypothetical protein LOC645960 [Homo
sapiens]
Length = 226
Score = 108 bits (269), Expect = 2e-24
Identities = 54/74 (72%), Positives = 59/74 (79%), Gaps = 3/74 (4%)
Query: 88 CRLET--GIQGAFGKPQGTVARVHIGQV-KSICTKLQNKEHVIEAPCRAKFKFPGHQKIH 144
C +E I+GAF KPQG VARVHIGQV SICTKLQNKEHVIEA C+A FKFPG Q IH
Sbjct: 20 CSMENVASIRGAFEKPQGAVARVHIGQVIMSICTKLQNKEHVIEALCKANFKFPGRQNIH 79
Query: 145 ISKKWGFTKFNVDE 158
S+KW FTKF+VDE
Sbjct: 80 FSEKWDFTKFSVDE 93
>gi|11056061 thymosin, beta 4 [Homo sapiens]
Length = 44
Score = 69.7 bits (169), Expect = 1e-12
Identities = 35/42 (83%), Positives = 36/42 (85%)
Query: 1 MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAG 42
MSDK +M EIEKF KSKLKKTE QEKNP PSKE IEQEKQAG
Sbjct: 1 MSDKPDMAEIEKFDKSKLKKTETQEKNPLPSKETIEQEKQAG 42
>gi|34013530 thymosin-like 3 [Homo sapiens]
Length = 44
Score = 67.8 bits (164), Expect = 4e-12
Identities = 34/42 (80%), Positives = 35/42 (83%)
Query: 1 MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAG 42
MSDK +M EIEKF K KLKKTE QEKNP PSKE IEQEKQAG
Sbjct: 1 MSDKPDMAEIEKFDKPKLKKTETQEKNPLPSKETIEQEKQAG 42
>gi|4759244 thymosin, beta 4, Y chromosome [Homo sapiens]
Length = 44
Score = 65.1 bits (157), Expect = 2e-11
Identities = 33/42 (78%), Positives = 34/42 (80%)
Query: 1 MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQAG 42
MSDK M EIEKF KSKLKKTE QEKNP SKE IEQE+QAG
Sbjct: 1 MSDKPGMAEIEKFDKSKLKKTETQEKNPLSSKETIEQERQAG 42
>gi|167555119 thymosin beta15b [Homo sapiens]
Length = 45
Score = 55.5 bits (132), Expect = 2e-08
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 1 MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQ 40
MSDK ++ E+EKF +SKLKKT +EKN PSKE I+QEK+
Sbjct: 1 MSDKPDLSEVEKFDRSKLKKTNTEEKNTLPSKETIQQEKE 40
>gi|11496273 thymosin-like 8 [Homo sapiens]
Length = 45
Score = 55.5 bits (132), Expect = 2e-08
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 1 MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQ 40
MSDK ++ E+EKF +SKLKKT +EKN PSKE I+QEK+
Sbjct: 1 MSDKPDLSEVEKFDRSKLKKTNTEEKNTLPSKETIQQEKE 40
>gi|10863895 thymosin, beta 10 [Homo sapiens]
Length = 44
Score = 54.3 bits (129), Expect = 4e-08
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 1 MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQA 41
M+DK +M EI F K+KLKKTE QEKN P+KE IEQEK++
Sbjct: 1 MADKPDMGEIASFDKAKLKKTETQEKNTLPTKETIEQEKRS 41
>gi|239754119 PREDICTED: hypothetical protein [Homo sapiens]
Length = 45
Score = 37.0 bits (84), Expect = 0.007
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 1 MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQ 40
MS K +M ++ KF + KLKK +EKN +E I+QEK+
Sbjct: 1 MSYKPDMSKVGKFDREKLKKINNKEKNTLLPQETIQQEKE 40
>gi|239748631 PREDICTED: hypothetical protein XP_002346748 [Homo
sapiens]
Length = 45
Score = 37.0 bits (84), Expect = 0.007
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 1 MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQ 40
MS K +M ++ KF + KLKK +EKN +E I+QEK+
Sbjct: 1 MSYKPDMSKVGKFDREKLKKINNKEKNTLLPQETIQQEKE 40
>gi|239742658 PREDICTED: hypothetical protein XP_002342605 [Homo
sapiens]
Length = 45
Score = 37.0 bits (84), Expect = 0.007
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 1 MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEKQ 40
MS K +M ++ KF + KLKK +EKN +E I+QEK+
Sbjct: 1 MSYKPDMSKVGKFDREKLKKINNKEKNTLLPQETIQQEKE 40
>gi|169183848 PREDICTED: similar to thymosin, beta 10 [Homo
sapiens]
Length = 43
Score = 36.2 bits (82), Expect = 0.012
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 1 MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEK 39
M+ K +++EI K+KLK TEMQ KN +KE EQEK
Sbjct: 1 MAHKLDLEEIASLDKAKLKATEMQ-KNTLMTKETTEQEK 38
>gi|169179692 PREDICTED: similar to thymosin, beta 10 [Homo
sapiens]
Length = 43
Score = 36.2 bits (82), Expect = 0.012
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 1 MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEK 39
M+ K +++EI K+KLK TEMQ KN +KE EQEK
Sbjct: 1 MAHKLDLEEIASLDKAKLKATEMQ-KNTLMTKETTEQEK 38
>gi|169180100 PREDICTED: similar to thymosin, beta 10 [Homo
sapiens]
Length = 43
Score = 36.2 bits (82), Expect = 0.012
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 1 MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEK 39
M+ K +++EI K+KLK TEMQ KN +KE EQEK
Sbjct: 1 MAHKLDLEEIASLDKAKLKATEMQ-KNTLMTKETTEQEK 38
>gi|197927454 DEK oncogene isoform 2 [Homo sapiens]
Length = 341
Score = 29.6 bits (65), Expect = 1.1
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 1 MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEK 39
+SD+S+ DE EK +K + E +E +P K+ ++EK
Sbjct: 192 LSDESSSDEDEKKNKEESSDDEDKESEEEPPKKTAKREK 230
>gi|4503249 DEK oncogene isoform 1 [Homo sapiens]
Length = 375
Score = 29.6 bits (65), Expect = 1.1
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 1 MSDKSNMDEIEKFSKSKLKKTEMQEKNPQPSKEWIEQEK 39
+SD+S+ DE EK +K + E +E +P K+ ++EK
Sbjct: 226 LSDESSSDEDEKKNKEESSDDEDKESEEEPPKKTAKREK 264
>gi|24475859 zinc finger protein 101 [Homo sapiens]
Length = 436
Score = 28.1 bits (61), Expect = 3.3
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 10/82 (12%)
Query: 70 GDRPFKCTFMSLTLHYPRCRLETGIQGAFGKPQGTVARVHIGQVKSICTKLQNKE--HVI 127
G+RP++C T +YP C + KP G+ C+ L+ E H
Sbjct: 334 GERPYECNKCGKTFNYPSCFRRHKKTHSGEKPYEC---TRCGKAFGWCSSLRRHEMTHTG 390
Query: 128 EAP-----CRAKFKFPGHQKIH 144
E P C F F + ++H
Sbjct: 391 EKPFDCKQCGKVFTFSNYLRLH 412
>gi|119393899 GLI-Kruppel family member GLI3 [Homo sapiens]
Length = 1580
Score = 27.3 bits (59), Expect = 5.6
Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 15/97 (15%)
Query: 67 RVLGDRPFKCTFMSLTLHYPRC-RLETGIQGAFGKPQGTVARVHIGQVKSIC-----TKL 120
R G++P KCTF T Y R L+T ++ G+ H G K+ K
Sbjct: 539 RHTGEKPHKCTFEGCTKAYSRLENLKTHLRSHTGEKPYVCE--HEGCNKAFSNASDRAKH 596
Query: 121 QNKEHVIEAP-------CRAKFKFPGHQKIHISKKWG 150
QN+ H E P C ++ P + H+ G
Sbjct: 597 QNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHG 633
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,280,989
Number of Sequences: 37866
Number of extensions: 264699
Number of successful extensions: 1042
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 994
Number of HSP's gapped (non-prelim): 42
length of query: 158
length of database: 18,247,518
effective HSP length: 94
effective length of query: 64
effective length of database: 14,688,114
effective search space: 940039296
effective search space used: 940039296
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.