Search of human proteins with 239748962

Search of human proteins with 239748962

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239748962 PREDICTED: hypothetical protein XP_002346868 [Homo
sapiens]
         (155 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239748962 PREDICTED: hypothetical protein XP_002346868 [Homo ...   304   2e-83
gi|239742982 PREDICTED: hypothetical protein XP_002342710 [Homo ...   291   2e-79
gi|19913371 transducin (beta)-like 1 X-linked receptor 1 [Homo s...   226   8e-60
gi|239754401 PREDICTED: similar to transducin (beta)-like 1 X-li...   223   7e-59
gi|19913367 transducin beta-like 1Y [Homo sapiens]                    187   2e-48
gi|19913365 transducin beta-like 1Y [Homo sapiens]                    187   2e-48
gi|15150805 transducin beta-like 1Y [Homo sapiens]                    187   2e-48
gi|213021190 transducin beta-like 1X isoform b [Homo sapiens]         187   3e-48
gi|213021188 transducin beta-like 1X isoform b [Homo sapiens]         187   3e-48
gi|213021186 transducin beta-like 1X isoform a [Homo sapiens]         187   3e-48
gi|5032159 transducin beta-like 1X isoform a [Homo sapiens]           187   3e-48
gi|40255052 IQ motif containing with AAA domain 1 [Homo sapiens]       38   0.004
gi|38327634 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo sapi...    34   0.044
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f...    33   0.075
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e...    33   0.075
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d...    33   0.075
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ...    33   0.075
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ...    33   0.075
gi|33356550 G patch domain containing 4 isoform 2 [Homo sapiens]       33   0.075
gi|33356552 G patch domain containing 4 isoform 1 [Homo sapiens]       33   0.075
gi|239750213 PREDICTED: hypothetical protein [Homo sapiens]            32   0.22 
gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo...    32   0.29 
gi|21703346 spartin [Homo sapiens]                                     32   0.29 
gi|214830187 spartin [Homo sapiens]                                    32   0.29 
gi|214830109 spartin [Homo sapiens]                                    32   0.29 
gi|214830079 spartin [Homo sapiens]                                    32   0.29 
gi|124494254 ErbB3-binding protein 1 [Homo sapiens]                    32   0.29 
gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo sapi...    31   0.37 
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap...    31   0.37 
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap...    31   0.37 

>gi|239748962 PREDICTED: hypothetical protein XP_002346868 [Homo
           sapiens]
          Length = 155

 Score =  304 bits (779), Expect = 2e-83
 Identities = 155/155 (100%), Positives = 155/155 (100%)

Query: 1   MDAFQKSASHSAFTFGIESRISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTFF 60
           MDAFQKSASHSAFTFGIESRISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTFF
Sbjct: 1   MDAFQKSASHSAFTFGIESRISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTFF 60

Query: 61  DGRPMSLSLIDALMPDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENT 120
           DGRPMSLSLIDALMPDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENT
Sbjct: 61  DGRPMSLSLIDALMPDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENT 120

Query: 121 ANGEENGAHIIANNHTDTMEVDGDIEIPPNKAGQG 155
           ANGEENGAHIIANNHTDTMEVDGDIEIPPNKAGQG
Sbjct: 121 ANGEENGAHIIANNHTDTMEVDGDIEIPPNKAGQG 155


>gi|239742982 PREDICTED: hypothetical protein XP_002342710 [Homo
           sapiens]
          Length = 177

 Score =  291 bits (744), Expect = 2e-79
 Identities = 148/148 (100%), Positives = 148/148 (100%)

Query: 8   ASHSAFTFGIESRISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTFFDGRPMSL 67
           ASHSAFTFGIESRISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTFFDGRPMSL
Sbjct: 30  ASHSAFTFGIESRISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTFFDGRPMSL 89

Query: 68  SLIDALMPDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGEENG 127
           SLIDALMPDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGEENG
Sbjct: 90  SLIDALMPDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGEENG 149

Query: 128 AHIIANNHTDTMEVDGDIEIPPNKAGQG 155
           AHIIANNHTDTMEVDGDIEIPPNKAGQG
Sbjct: 150 AHIIANNHTDTMEVDGDIEIPPNKAGQG 177


>gi|19913371 transducin (beta)-like 1 X-linked receptor 1 [Homo
           sapiens]
          Length = 514

 Score =  226 bits (575), Expect = 8e-60
 Identities = 123/150 (82%), Positives = 127/150 (84%), Gaps = 15/150 (10%)

Query: 9   SHSAFTFGIESRISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTFFDGRPM-SL 67
           SHSAFTFGIES ISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGT FDGRP+ SL
Sbjct: 22  SHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTLFDGRPIESL 81

Query: 68  SLIDALMPDVVQTRQQAYSDKLKQQQ-----AAAATANQQGSAKKKKKKKKKKNAENTAN 122
           SLIDA+MPDVVQTRQQAY DKL QQQ     AAAA A+QQGSA         KN ENTAN
Sbjct: 82  SLIDAVMPDVVQTRQQAYRDKLAQQQAAAAAAAAAAASQQGSA---------KNGENTAN 132

Query: 123 GEENGAHIIANNHTDTMEVDGDIEIPPNKA 152
           GEENGAH IANNHTD MEVDGD+EIPPNKA
Sbjct: 133 GEENGAHTIANNHTDMMEVDGDVEIPPNKA 162


>gi|239754401 PREDICTED: similar to transducin (beta)-like 1
           X-linked receptor 1 [Homo sapiens]
          Length = 132

 Score =  223 bits (567), Expect = 7e-59
 Identities = 117/125 (93%), Positives = 120/125 (96%)

Query: 1   MDAFQKSASHSAFTFGIESRISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTFF 60
           MDAFQKSASHSAFTFGIESRISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTFF
Sbjct: 1   MDAFQKSASHSAFTFGIESRISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTFF 60

Query: 61  DGRPMSLSLIDALMPDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENT 120
           DGRPMSLSLIDALMPDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKK  +++
Sbjct: 61  DGRPMSLSLIDALMPDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKCRKHS 120

Query: 121 ANGEE 125
             G E
Sbjct: 121 KWGGE 125


>gi|19913367 transducin beta-like 1Y [Homo sapiens]
          Length = 522

 Score =  187 bits (476), Expect = 2e-48
 Identities = 101/152 (66%), Positives = 116/152 (76%), Gaps = 9/152 (5%)

Query: 9   SHSAFTFGIESRISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTFFDGRPM-SL 67
           SHSAFTFGIES ISQSNING LVPP+ALISI+QKGLQYVEAE+SIN+DGT FD RP+ SL
Sbjct: 22  SHSAFTFGIESHISQSNINGTLVPPSALISILQKGLQYVEAEISINKDGTVFDSRPIESL 81

Query: 68  SLIDALMPDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKK-------KKKKKKKNAENT 120
           SLI A++PDVVQ RQQA+ +KL QQQA+AA       AK          ++   KN E T
Sbjct: 82  SLIVAVIPDVVQMRQQAFGEKLTQQQASAAATEASAMAKAATMTPAAISQQNPPKNREAT 141

Query: 121 ANGEENGAHIIANNHTDTMEVDGDIEIPPNKA 152
            NGEENGAH I NNH+  ME+DGD+EIPPNKA
Sbjct: 142 VNGEENGAHEI-NNHSKPMEIDGDVEIPPNKA 172


>gi|19913365 transducin beta-like 1Y [Homo sapiens]
          Length = 522

 Score =  187 bits (476), Expect = 2e-48
 Identities = 101/152 (66%), Positives = 116/152 (76%), Gaps = 9/152 (5%)

Query: 9   SHSAFTFGIESRISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTFFDGRPM-SL 67
           SHSAFTFGIES ISQSNING LVPP+ALISI+QKGLQYVEAE+SIN+DGT FD RP+ SL
Sbjct: 22  SHSAFTFGIESHISQSNINGTLVPPSALISILQKGLQYVEAEISINKDGTVFDSRPIESL 81

Query: 68  SLIDALMPDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKK-------KKKKKKKNAENT 120
           SLI A++PDVVQ RQQA+ +KL QQQA+AA       AK          ++   KN E T
Sbjct: 82  SLIVAVIPDVVQMRQQAFGEKLTQQQASAAATEASAMAKAATMTPAAISQQNPPKNREAT 141

Query: 121 ANGEENGAHIIANNHTDTMEVDGDIEIPPNKA 152
            NGEENGAH I NNH+  ME+DGD+EIPPNKA
Sbjct: 142 VNGEENGAHEI-NNHSKPMEIDGDVEIPPNKA 172


>gi|15150805 transducin beta-like 1Y [Homo sapiens]
          Length = 522

 Score =  187 bits (476), Expect = 2e-48
 Identities = 101/152 (66%), Positives = 116/152 (76%), Gaps = 9/152 (5%)

Query: 9   SHSAFTFGIESRISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTFFDGRPM-SL 67
           SHSAFTFGIES ISQSNING LVPP+ALISI+QKGLQYVEAE+SIN+DGT FD RP+ SL
Sbjct: 22  SHSAFTFGIESHISQSNINGTLVPPSALISILQKGLQYVEAEISINKDGTVFDSRPIESL 81

Query: 68  SLIDALMPDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKK-------KKKKKKKNAENT 120
           SLI A++PDVVQ RQQA+ +KL QQQA+AA       AK          ++   KN E T
Sbjct: 82  SLIVAVIPDVVQMRQQAFGEKLTQQQASAAATEASAMAKAATMTPAAISQQNPPKNREAT 141

Query: 121 ANGEENGAHIIANNHTDTMEVDGDIEIPPNKA 152
            NGEENGAH I NNH+  ME+DGD+EIPPNKA
Sbjct: 142 VNGEENGAHEI-NNHSKPMEIDGDVEIPPNKA 172


>gi|213021190 transducin beta-like 1X isoform b [Homo sapiens]
          Length = 526

 Score =  187 bits (475), Expect = 3e-48
 Identities = 102/154 (66%), Positives = 116/154 (75%), Gaps = 11/154 (7%)

Query: 9   SHSAFTFGIESRISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTFFDGRPM-SL 67
           SHSAFTFGIES ISQSNING LVPPAALISI+QKGLQYVEAE+SINEDGT FDGRP+ SL
Sbjct: 22  SHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESL 81

Query: 68  SLIDALMPDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKK---------KKKKKKKNAE 118
           SLIDA+MPDVVQTRQQA+ +KL QQQA+AA A    +A              +   KN E
Sbjct: 82  SLIDAVMPDVVQTRQQAFREKLAQQQASAAAAAAAATAAATAATTTSAGVSHQNPSKNRE 141

Query: 119 NTANGEENGAHIIANNHTDTMEVDGDIEIPPNKA 152
            T NGEEN AH + NNH   ME+DG++EIP +KA
Sbjct: 142 ATVNGEENRAHSV-NNHAKPMEIDGEVEIPSSKA 174


>gi|213021188 transducin beta-like 1X isoform b [Homo sapiens]
          Length = 526

 Score =  187 bits (475), Expect = 3e-48
 Identities = 102/154 (66%), Positives = 116/154 (75%), Gaps = 11/154 (7%)

Query: 9   SHSAFTFGIESRISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTFFDGRPM-SL 67
           SHSAFTFGIES ISQSNING LVPPAALISI+QKGLQYVEAE+SINEDGT FDGRP+ SL
Sbjct: 22  SHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESL 81

Query: 68  SLIDALMPDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKK---------KKKKKKKNAE 118
           SLIDA+MPDVVQTRQQA+ +KL QQQA+AA A    +A              +   KN E
Sbjct: 82  SLIDAVMPDVVQTRQQAFREKLAQQQASAAAAAAAATAAATAATTTSAGVSHQNPSKNRE 141

Query: 119 NTANGEENGAHIIANNHTDTMEVDGDIEIPPNKA 152
            T NGEEN AH + NNH   ME+DG++EIP +KA
Sbjct: 142 ATVNGEENRAHSV-NNHAKPMEIDGEVEIPSSKA 174


>gi|213021186 transducin beta-like 1X isoform a [Homo sapiens]
          Length = 577

 Score =  187 bits (475), Expect = 3e-48
 Identities = 102/154 (66%), Positives = 116/154 (75%), Gaps = 11/154 (7%)

Query: 9   SHSAFTFGIESRISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTFFDGRPM-SL 67
           SHSAFTFGIES ISQSNING LVPPAALISI+QKGLQYVEAE+SINEDGT FDGRP+ SL
Sbjct: 73  SHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESL 132

Query: 68  SLIDALMPDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKK---------KKKKKKKNAE 118
           SLIDA+MPDVVQTRQQA+ +KL QQQA+AA A    +A              +   KN E
Sbjct: 133 SLIDAVMPDVVQTRQQAFREKLAQQQASAAAAAAAATAAATAATTTSAGVSHQNPSKNRE 192

Query: 119 NTANGEENGAHIIANNHTDTMEVDGDIEIPPNKA 152
            T NGEEN AH + NNH   ME+DG++EIP +KA
Sbjct: 193 ATVNGEENRAHSV-NNHAKPMEIDGEVEIPSSKA 225


>gi|5032159 transducin beta-like 1X isoform a [Homo sapiens]
          Length = 577

 Score =  187 bits (475), Expect = 3e-48
 Identities = 102/154 (66%), Positives = 116/154 (75%), Gaps = 11/154 (7%)

Query: 9   SHSAFTFGIESRISQSNINGALVPPAALISIIQKGLQYVEAEVSINEDGTFFDGRPM-SL 67
           SHSAFTFGIES ISQSNING LVPPAALISI+QKGLQYVEAE+SINEDGT FDGRP+ SL
Sbjct: 73  SHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESL 132

Query: 68  SLIDALMPDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKK---------KKKKKKKNAE 118
           SLIDA+MPDVVQTRQQA+ +KL QQQA+AA A    +A              +   KN E
Sbjct: 133 SLIDAVMPDVVQTRQQAFREKLAQQQASAAAAAAAATAAATAATTTSAGVSHQNPSKNRE 192

Query: 119 NTANGEENGAHIIANNHTDTMEVDGDIEIPPNKA 152
            T NGEEN AH + NNH   ME+DG++EIP +KA
Sbjct: 193 ATVNGEENRAHSV-NNHAKPMEIDGEVEIPSSKA 225


>gi|40255052 IQ motif containing with AAA domain 1 [Homo sapiens]
          Length = 822

 Score = 37.7 bits (86), Expect = 0.004
 Identities = 31/125 (24%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 46  YVEAEVSINEDGTFFDGRPMSLSLIDALMPDVVQTRQQA-----------------YSDK 88
           Y EA V+I  D    +G  +  +L D +    ++ R                    +SDK
Sbjct: 274 YREALVTIKNDLKLIEGVDIKENLQDQIRHWFIECRNLTGTFPDYPDVEEGGSAIIFSDK 333

Query: 89  LKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGEENGAHIIANNHTDTMEVDGDIEIP 148
             QQ      ANQ+   K KKKKKKK+     A  ++ G         +  ++   + +P
Sbjct: 334 TIQQVIEDIIANQEEEEKNKKKKKKKEKQPKKAKKQKKGTKEKNKEEDEKWKMSPSLFLP 393

Query: 149 PNKAG 153
             K G
Sbjct: 394 AMKEG 398



 Score = 28.1 bits (61), Expect = 3.2
 Identities = 15/53 (28%), Positives = 29/53 (54%)

Query: 70  IDALMPDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTAN 122
           +D LM   ++  + A   + ++   A    +++G   KKK+KK KK+ + TA+
Sbjct: 440 VDELMRQELKNLKLAVDRERERPVKAGKKKDKKGKKGKKKEKKAKKDKDLTAD 492


>gi|38327634 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo
           sapiens]
          Length = 670

 Score = 34.3 bits (77), Expect = 0.044
 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 16/80 (20%)

Query: 80  TRQQAYSDKLKQQQAAAATANQQGSAKKKKKKK---------KKKNAENTANGEENGAHI 130
           T+    S  L   +AA  ++N +   KKKKK+K         KK   EN    EE  A  
Sbjct: 84  TKSPQKSTVLTNGEAAMQSSNSESKKKKKKKRKMVNDAEPDTKKAKTENKGKSEEESAE- 142

Query: 131 IANNHTDTMEVDGDIEIPPN 150
                  T E + ++E P N
Sbjct: 143 ------TTKETENNVEKPDN 156


>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
            [Homo sapiens]
          Length = 1412

 Score = 33.5 bits (75), Expect = 0.075
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 81   RQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENT 120
            R++    K K+++A  A+     S  +KKKKKKKK AE T
Sbjct: 1372 RKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTAEQT 1411


>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
            [Homo sapiens]
          Length = 1451

 Score = 33.5 bits (75), Expect = 0.075
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 81   RQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENT 120
            R++    K K+++A  A+     S  +KKKKKKKK AE T
Sbjct: 1411 RKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTAEQT 1450


>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
            [Homo sapiens]
          Length = 1488

 Score = 33.5 bits (75), Expect = 0.075
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 81   RQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENT 120
            R++    K K+++A  A+     S  +KKKKKKKK AE T
Sbjct: 1448 RKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTAEQT 1487


>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b [Homo
            sapiens]
          Length = 1411

 Score = 33.5 bits (75), Expect = 0.075
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 81   RQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENT 120
            R++    K K+++A  A+     S  +KKKKKKKK AE T
Sbjct: 1371 RKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTAEQT 1410


>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a [Homo
            sapiens]
          Length = 1450

 Score = 33.5 bits (75), Expect = 0.075
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 81   RQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENT 120
            R++    K K+++A  A+     S  +KKKKKKKK AE T
Sbjct: 1410 RKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTAEQT 1449


>gi|33356550 G patch domain containing 4 isoform 2 [Homo sapiens]
          Length = 370

 Score = 33.5 bits (75), Expect = 0.075
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 78  VQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGEE 125
           ++ ++QA+  +LK Q   A     +    KKKKKK+++  E  A   E
Sbjct: 174 LEAQEQAFLARLKGQDPGAPQLQSESKPPKKKKKKRRQKEEEEATASE 221


>gi|33356552 G patch domain containing 4 isoform 1 [Homo sapiens]
          Length = 375

 Score = 33.5 bits (75), Expect = 0.075
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 78  VQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGEE 125
           ++ ++QA+  +LK Q   A     +    KKKKKK+++  E  A   E
Sbjct: 179 LEAQEQAFLARLKGQDPGAPQLQSESKPPKKKKKKRRQKEEEEATASE 226


>gi|239750213 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 248

 Score = 32.0 bits (71), Expect = 0.22
 Identities = 16/51 (31%), Positives = 26/51 (50%)

Query: 80  TRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGEENGAHI 130
           T ++   +K K+++       ++   KKKKKKKKKK  +   N +  G  I
Sbjct: 72  TTKEKEKEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKKKLNAKVCGLEI 122



 Score = 28.5 bits (62), Expect = 2.4
 Identities = 13/40 (32%), Positives = 23/40 (57%)

Query: 79  QTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAE 118
           +  ++   +K K+++       ++   KKKKKKKKK NA+
Sbjct: 77  EKEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKKKLNAK 116



 Score = 27.7 bits (60), Expect = 4.1
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query: 79  QTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGEE 125
           +  ++   +K K+++       ++   KKKKKKKKKK       G E
Sbjct: 75  EKEKEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKKKLNAKVCGLE 121


>gi|14670392 bromodomain adjacent to zinc finger domain, 1B [Homo
           sapiens]
          Length = 1483

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 3/53 (5%)

Query: 76  DVVQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGE-ENG 127
           D ++TRQQ  ++  K++ A     N +  A+K+K+K+ +  A+N  NG+ ENG
Sbjct: 764 DHMETRQQMSAELWKERLAVLKEENDKKRAEKQKRKEME--AKNKENGKVENG 814



 Score = 26.6 bits (57), Expect = 9.2
 Identities = 12/31 (38%), Positives = 21/31 (67%)

Query: 78  VQTRQQAYSDKLKQQQAAAATANQQGSAKKK 108
           V+  +QA  +++++ +AAA  A Q+G AK K
Sbjct: 865 VKLERQAEEERIRKHKAAAEKAFQEGIAKAK 895


>gi|21703346 spartin [Homo sapiens]
          Length = 666

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 16/51 (31%), Positives = 28/51 (54%)

Query: 81  RQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGEENGAHII 131
           R +  SD+LK+          QG+   + K K+ K A++T++ E N +HI+
Sbjct: 353 RTRPSSDQLKEASGTDVKQLDQGNKDVRHKGKRGKRAKDTSSEEVNLSHIV 403


>gi|214830187 spartin [Homo sapiens]
          Length = 666

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 16/51 (31%), Positives = 28/51 (54%)

Query: 81  RQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGEENGAHII 131
           R +  SD+LK+          QG+   + K K+ K A++T++ E N +HI+
Sbjct: 353 RTRPSSDQLKEASGTDVKQLDQGNKDVRHKGKRGKRAKDTSSEEVNLSHIV 403


>gi|214830109 spartin [Homo sapiens]
          Length = 666

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 16/51 (31%), Positives = 28/51 (54%)

Query: 81  RQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGEENGAHII 131
           R +  SD+LK+          QG+   + K K+ K A++T++ E N +HI+
Sbjct: 353 RTRPSSDQLKEASGTDVKQLDQGNKDVRHKGKRGKRAKDTSSEEVNLSHIV 403


>gi|214830079 spartin [Homo sapiens]
          Length = 666

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 16/51 (31%), Positives = 28/51 (54%)

Query: 81  RQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGEENGAHII 131
           R +  SD+LK+          QG+   + K K+ K A++T++ E N +HI+
Sbjct: 353 RTRPSSDQLKEASGTDVKQLDQGNKDVRHKGKRGKRAKDTSSEEVNLSHIV 403


>gi|124494254 ErbB3-binding protein 1 [Homo sapiens]
          Length = 394

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 8/63 (12%)

Query: 75  PDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGEENGAHIIANN 134
           PD+ ++  +    +LK        A  Q SA +K +KKKKK A  TA    +G  +  N 
Sbjct: 340 PDLYKSEMEVQDAELK--------ALLQSSASRKTQKKKKKKASKTAENATSGETLEENE 391

Query: 135 HTD 137
             D
Sbjct: 392 AGD 394


>gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo
           sapiens]
          Length = 1002

 Score = 31.2 bits (69), Expect = 0.37
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)

Query: 72  ALMPDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGEENGAHII 131
           A+  +  Q++  A   KL++ Q   +     G AKKKKK K   N E T +G  +     
Sbjct: 12  AMSEETRQSKLAAAKKKLREYQQRNSPGVPTG-AKKKKKIKNGSNPETTTSGGCHSPEDT 70

Query: 132 ANNHTDTMEVDGDIEIP 148
             ++  T++   D  +P
Sbjct: 71  PKDNAATLQPSDDTVLP 87


>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
          Length = 1758

 Score = 31.2 bits (69), Expect = 0.37
 Identities = 15/55 (27%), Positives = 30/55 (54%)

Query: 75   PDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGEENGAH 129
            P V  +R  + S    +  +++A++ +   +KKKKKKK+KK  +     +++  H
Sbjct: 1662 PSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKH 1716


>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
          Length = 1792

 Score = 31.2 bits (69), Expect = 0.37
 Identities = 15/55 (27%), Positives = 30/55 (54%)

Query: 75   PDVVQTRQQAYSDKLKQQQAAAATANQQGSAKKKKKKKKKKNAENTANGEENGAH 129
            P V  +R  + S    +  +++A++ +   +KKKKKKK+KK  +     +++  H
Sbjct: 1696 PSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKH 1750


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.308    0.124    0.332 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,395,948
Number of Sequences: 37866
Number of extensions: 207478
Number of successful extensions: 2776
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 1938
Number of HSP's gapped (non-prelim): 560
length of query: 155
length of database: 18,247,518
effective HSP length: 93
effective length of query: 62
effective length of database: 14,725,980
effective search space: 913010760
effective search space used: 913010760
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.