BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239748651 PREDICTED: similar to rCG33261 [Homo sapiens] (213 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239754098 PREDICTED: similar to rCG33261 [Homo sapiens] 427 e-120 gi|239748651 PREDICTED: similar to rCG33261 [Homo sapiens] 427 e-120 gi|239742676 PREDICTED: similar to rCG33261 [Homo sapiens] 427 e-120 gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 39 0.003 gi|110349719 titin isoform N2-A [Homo sapiens] 35 0.062 gi|31742498 unc-84 homolog B [Homo sapiens] 34 0.081 gi|46559761 PDZ domain containing 4 [Homo sapiens] 33 0.14 gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 33 0.18 gi|205360947 microtubule associated monoxygenase, calponin and L... 33 0.24 gi|226530313 microtubule associated monoxygenase, calponin and L... 33 0.24 gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [H... 32 0.31 gi|60592764 chromosome 22 open reading frame 42 [Homo sapiens] 32 0.40 gi|197333868 T-box 2 [Homo sapiens] 32 0.52 gi|217330634 serine/threonine kinase 36 [Homo sapiens] 32 0.52 gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu... 31 0.89 gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre... 31 0.89 gi|239753371 PREDICTED: hypothetical protein [Homo sapiens] 31 0.89 gi|239747938 PREDICTED: hypothetical protein XP_002346476 [Homo ... 31 0.89 gi|239741833 PREDICTED: hypothetical protein XP_002342339 [Homo ... 31 0.89 gi|45597177 TBC1 domain family, member 9B (with GRAM domain) iso... 31 0.89 gi|45597175 TBC1 domain family, member 9B (with GRAM domain) iso... 31 0.89 gi|117606360 ADP-ribosylation factor guanine nucleotide factor 6... 30 1.2 gi|165932385 hypothetical protein LOC388341 isoform 1 [Homo sapi... 30 1.2 gi|41393608 reticulon 3 isoform b [Homo sapiens] 30 1.5 gi|21704281 junctophilin 2 isoform 1 [Homo sapiens] 30 1.5 gi|54607124 RNA binding motif protein 15B [Homo sapiens] 30 1.5 gi|23238226 CDC42 effector protein 1 [Homo sapiens] 30 1.5 gi|55956788 nucleolin [Homo sapiens] 30 2.0 gi|55741677 SET domain containing 1A [Homo sapiens] 30 2.0 gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens] 30 2.0 >gi|239754098 PREDICTED: similar to rCG33261 [Homo sapiens] Length = 213 Score = 427 bits (1099), Expect = e-120 Identities = 213/213 (100%), Positives = 213/213 (100%) Query: 1 MWPLRVYTRKKREGQRLNLTPTPDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGG 60 MWPLRVYTRKKREGQRLNLTPTPDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGG Sbjct: 1 MWPLRVYTRKKREGQRLNLTPTPDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGG 60 Query: 61 SGSGPFSPRLGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSELVSGLSL 120 SGSGPFSPRLGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSELVSGLSL Sbjct: 61 SGSGPFSPRLGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSELVSGLSL 120 Query: 121 HHGMASSLLSYSVTDSYAEYKSFEESFPSPELFRKSDYLDWECPNLEEHMQWKNSTLLDT 180 HHGMASSLLSYSVTDSYAEYKSFEESFPSPELFRKSDYLDWECPNLEEHMQWKNSTLLDT Sbjct: 121 HHGMASSLLSYSVTDSYAEYKSFEESFPSPELFRKSDYLDWECPNLEEHMQWKNSTLLDT 180 Query: 181 SKAVAIEKAPQFSNVSAIFSTSSEDYQKCHRKT 213 SKAVAIEKAPQFSNVSAIFSTSSEDYQKCHRKT Sbjct: 181 SKAVAIEKAPQFSNVSAIFSTSSEDYQKCHRKT 213 >gi|239748651 PREDICTED: similar to rCG33261 [Homo sapiens] Length = 213 Score = 427 bits (1099), Expect = e-120 Identities = 213/213 (100%), Positives = 213/213 (100%) Query: 1 MWPLRVYTRKKREGQRLNLTPTPDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGG 60 MWPLRVYTRKKREGQRLNLTPTPDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGG Sbjct: 1 MWPLRVYTRKKREGQRLNLTPTPDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGG 60 Query: 61 SGSGPFSPRLGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSELVSGLSL 120 SGSGPFSPRLGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSELVSGLSL Sbjct: 61 SGSGPFSPRLGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSELVSGLSL 120 Query: 121 HHGMASSLLSYSVTDSYAEYKSFEESFPSPELFRKSDYLDWECPNLEEHMQWKNSTLLDT 180 HHGMASSLLSYSVTDSYAEYKSFEESFPSPELFRKSDYLDWECPNLEEHMQWKNSTLLDT Sbjct: 121 HHGMASSLLSYSVTDSYAEYKSFEESFPSPELFRKSDYLDWECPNLEEHMQWKNSTLLDT 180 Query: 181 SKAVAIEKAPQFSNVSAIFSTSSEDYQKCHRKT 213 SKAVAIEKAPQFSNVSAIFSTSSEDYQKCHRKT Sbjct: 181 SKAVAIEKAPQFSNVSAIFSTSSEDYQKCHRKT 213 >gi|239742676 PREDICTED: similar to rCG33261 [Homo sapiens] Length = 213 Score = 427 bits (1099), Expect = e-120 Identities = 213/213 (100%), Positives = 213/213 (100%) Query: 1 MWPLRVYTRKKREGQRLNLTPTPDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGG 60 MWPLRVYTRKKREGQRLNLTPTPDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGG Sbjct: 1 MWPLRVYTRKKREGQRLNLTPTPDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGG 60 Query: 61 SGSGPFSPRLGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSELVSGLSL 120 SGSGPFSPRLGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSELVSGLSL Sbjct: 61 SGSGPFSPRLGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSELVSGLSL 120 Query: 121 HHGMASSLLSYSVTDSYAEYKSFEESFPSPELFRKSDYLDWECPNLEEHMQWKNSTLLDT 180 HHGMASSLLSYSVTDSYAEYKSFEESFPSPELFRKSDYLDWECPNLEEHMQWKNSTLLDT Sbjct: 121 HHGMASSLLSYSVTDSYAEYKSFEESFPSPELFRKSDYLDWECPNLEEHMQWKNSTLLDT 180 Query: 181 SKAVAIEKAPQFSNVSAIFSTSSEDYQKCHRKT 213 SKAVAIEKAPQFSNVSAIFSTSSEDYQKCHRKT Sbjct: 181 SKAVAIEKAPQFSNVSAIFSTSSEDYQKCHRKT 213 >gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] Length = 2968 Score = 38.9 bits (89), Expect = 0.003 Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 13/129 (10%) Query: 27 SPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGGSGSG-----PFSPRLGVTGEKSLQEN 81 S + + + GS+ +G+ E+ +++ GG G+G S R S + Sbjct: 2569 SSSSSSSSSGSETEGE--------EEGDKNGDGGCGTGGRNCSAASSRAASPASSSSSSS 2620 Query: 82 RSSEDTQDEKIASLRESVTDDLQVDSSSSNSELVSGLSLHHGMASSLLSYSVTDSYAEYK 141 SS + +S S + SSSS+S S S +SS S S TD + Sbjct: 2621 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCS 2680 Query: 142 SFEESFPSP 150 S +E+ P+P Sbjct: 2681 SDDEAAPAP 2689 Score = 28.9 bits (63), Expect = 3.4 Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 4/88 (4%) Query: 9 RKKREGQRLN----LTPTPDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGGSGSG 64 RKK++G+ L P P++A AP S +K K + G G Sbjct: 2048 RKKKKGKEAGPGAGLPPPRAPALPSEARAPHASSLTAAKRSKAKAKGKEVKKENRGKGGA 2107 Query: 65 PFSPRLGVTGEKSLQENRSSEDTQDEKI 92 + E+ + N+ S ++DE + Sbjct: 2108 VSKLMESMAAEEDFEPNQDSSFSEDEHL 2135 >gi|110349719 titin isoform N2-A [Homo sapiens] Length = 33423 Score = 34.7 bits (78), Expect = 0.062 Identities = 29/140 (20%), Positives = 55/140 (39%), Gaps = 17/140 (12%) Query: 65 PFSPRLGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSE--------LVS 116 P P+ V EK L+ E+ K+ R+ V + +V + E ++ Sbjct: 9665 PEEPKRAVPEEKVLKLKPKREEEPPAKVTEFRKRVVKEEKVSIEAPKREPQPIKEVTIME 9724 Query: 117 GLSLHHGMASSLLSYSVTDSYAEY-----KSFEESFPSPELFRKSDYLDWECPNLEEHMQ 171 + + +S + Y EY K FEE P+ E + +Y + E EEH + Sbjct: 9725 EKERAYTLEEEAVSVQREEEYEEYEEYDYKEFEEYEPTEEYDQYEEYEEREYERYEEHEE 9784 Query: 172 WKNSTLLDTSKAVAIEKAPQ 191 + + + K + ++ P+ Sbjct: 9785 Y----ITEPEKPIPVKPVPE 9800 >gi|31742498 unc-84 homolog B [Homo sapiens] Length = 717 Score = 34.3 bits (77), Expect = 0.081 Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 21/130 (16%) Query: 3 PLRVYTRKKREGQRLNLTPTPDLGSPAKAEA-------------PPGSKRKGKVHGLSKI 49 PLR RK +RL+ P P LG + A PP S + ++HG + Sbjct: 39 PLRTLKRKSSNMKRLS--PAPQLGPSSDAHTSYYSESLVHESWFPPRSSLE-ELHGDANW 95 Query: 50 AEKAERSRQGGSGSGPFSPRLGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSS 109 E R+ G+G S G+ G K+ ++ S S + VD S Sbjct: 96 GEDLRVRRRRGTGGSESSRASGLVGRKATEDFLGSSSGY-----SSEDDYVGYSDVDQQS 150 Query: 110 SNSELVSGLS 119 S+S L S +S Sbjct: 151 SSSRLRSAVS 160 >gi|46559761 PDZ domain containing 4 [Homo sapiens] Length = 769 Score = 33.5 bits (75), Expect = 0.14 Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 8/75 (10%) Query: 3 PLRVYTRKKREGQRLNLTPT-PDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGGS 61 PLR R LN TP P + +PAKA PPGS K LS+ E RQ Sbjct: 491 PLR---RAMAGNSNLNRTPPGPAVATPAKAAPPPGS--PAKFRSLSRDPEAGR--RQHAE 543 Query: 62 GSGPFSPRLGVTGEK 76 G +P+ G+T E+ Sbjct: 544 ERGRRNPKTGLTLER 558 >gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] Length = 1020 Score = 33.1 bits (74), Expect = 0.18 Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 4/104 (3%) Query: 10 KKREGQRLNLTPTPDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGGSGSGPFSPR 69 KK E + PTP+ +PAK E +K K K +++A+K + S P + Sbjct: 893 KKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEK----TEVAKKEPDDAKAKEPSKPAEKK 948 Query: 70 LGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSE 113 +K +E ++ + + K + + L + S +E Sbjct: 949 EAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAE 992 >gi|205360947 microtubule associated monoxygenase, calponin and LIM domain containing 1 isoform 1 [Homo sapiens] Length = 1067 Score = 32.7 bits (73), Expect = 0.24 Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 12/109 (11%) Query: 4 LRVYTRKKREGQRLNLTPTPDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGGSGS 63 +R+ + +++ LNLTP P++ P K PP S S +A A S G G Sbjct: 806 IRLSSPERQRLSSLNLTPDPEMEPPPK---PPRS--------CSALARHALESSFVGWGL 854 Query: 64 GPFSPRLGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNS 112 SP+ V EK +E+ S + ++E + L V LQ + +S + Sbjct: 855 PVQSPQALVAMEKEEKESPFSSEEEEEDV-PLDSDVEQALQTFAKTSGT 902 >gi|226530313 microtubule associated monoxygenase, calponin and LIM domain containing 1 isoform 2 [Homo sapiens] Length = 981 Score = 32.7 bits (73), Expect = 0.24 Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 12/109 (11%) Query: 4 LRVYTRKKREGQRLNLTPTPDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGGSGS 63 +R+ + +++ LNLTP P++ P K PP S S +A A S G G Sbjct: 720 IRLSSPERQRLSSLNLTPDPEMEPPPK---PPRS--------CSALARHALESSFVGWGL 768 Query: 64 GPFSPRLGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNS 112 SP+ V EK +E+ S + ++E + L V LQ + +S + Sbjct: 769 PVQSPQALVAMEKEEKESPFSSEEEEEDV-PLDSDVEQALQTFAKTSGT 816 >gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [Homo sapiens] Length = 747 Score = 32.3 bits (72), Expect = 0.31 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 6/82 (7%) Query: 13 EGQRLNLTPTPDLGS-PAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGGSGSGPFSPRLG 71 E + PD PA+A A G G+ GL K E R SG +P Sbjct: 115 EAAAMEAAAEPDASEKPAEATAGSGGVNGGEEQGLGKREEDEPEER-----SGDETPGSE 169 Query: 72 VTGEKSLQENRSSEDTQDEKIA 93 V G+K+ +E +D++ K A Sbjct: 170 VPGDKAAEEQGDDQDSEKSKPA 191 >gi|60592764 chromosome 22 open reading frame 42 [Homo sapiens] Length = 251 Score = 32.0 bits (71), Expect = 0.40 Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 29/183 (15%) Query: 4 LRVYTRKKREGQRLNLTPTPDLGSPAKAEAPPGSKRKGKV----HGLSKI-----AEKAE 54 L + +K + Q L+L TP + +K SKR K+ HG+ + E + Sbjct: 51 LDLKAKKAQLMQYLSLPKTPKMLKMSKG-LDARSKRWLKIIWRRHGIWPLENIGPTEDVQ 109 Query: 55 RSRQGGSGSGPFSPRLGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSEL 114 S GG S + ++ ++R +ED Q + E++T D+++ + + L Sbjct: 110 ASAHGGVEENMTSD---IEIPEAKHDHRPTEDVQVSAHGGVEENITSDIEISEAKHDHHL 166 Query: 115 VSGLS------LHHGMASSL---LSYSVTDSYAEYKSFE-----ESFPSPELF--RKSDY 158 V LS L M S L LS S+ D S E +PE+ R DY Sbjct: 167 VEDLSESLSVCLEDFMTSDLSESLSVSLEDFMTSGLSESLSVSLEDLMTPEMAKERYEDY 226 Query: 159 LDW 161 L W Sbjct: 227 LCW 229 >gi|197333868 T-box 2 [Homo sapiens] Length = 712 Score = 31.6 bits (70), Expect = 0.52 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 20/105 (19%) Query: 10 KKREGQRLNLTPTPDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGGSGSGPFSPR 69 ++R G L +P PD SP + P ++ + + E+ + + G G GPF Sbjct: 369 EERAGAPLGRSPAPDSASPTRLTEPERARER-------RSPERGKEPAESG-GDGPF--- 417 Query: 70 LGVTGEKSLQENRSSEDTQDEKIASLRESVTDDL-----QVDSSS 109 G +SL++ R+ +DE E L Q DS+S Sbjct: 418 ----GLRSLEKERAEARRKDEGRKEAAEGKEQGLAPLVVQTDSAS 458 >gi|217330634 serine/threonine kinase 36 [Homo sapiens] Length = 1315 Score = 31.6 bits (70), Expect = 0.52 Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 33/186 (17%) Query: 23 PDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGGSGSGPFSPRLGVTGEKSLQ--- 79 PDLG+P + PP ++ L E+A R G+ S + E+++Q Sbjct: 267 PDLGTPFTSRLPP------ELQVLKD--EQAHRLAPKGNQSRILTQAYKRMAEEAMQKKH 318 Query: 80 ENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSELVSGLSLHHGMASSLLSYSVTDSYAE 139 +N Q++K + + ++ ++ S L++G+ +AS L S E Sbjct: 319 QNTGPALEQEDKTSKVAPGTAPLPRLGATPQESSLLAGI-----LASELKSSWAKSGTGE 373 Query: 140 YKS----------FEESFPS--PELF--RKSDYLDWECPNLEEHMQWKNSTLLDTSKAVA 185 S E +FP PE+ R +D +D E + +W++ LL+T++ V Sbjct: 374 VPSAPRENRTTPDCERAFPEERPEVLGQRSTDVVDLENEEPDSDNEWQH--LLETTEPVP 431 Query: 186 IE-KAP 190 I+ KAP Sbjct: 432 IQLKAP 437 >gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precursor [Homo sapiens] Length = 513 Score = 30.8 bits (68), Expect = 0.89 Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 5/138 (3%) Query: 75 EKSLQENRSSEDTQDEKIASLR----ESVTDDLQVDSSSSNSELVSGLSLHHGMASSLLS 130 E +L +S ++Q+E ++ R + T ++ S +SE S +L H + S Sbjct: 343 EANLSSQENSSESQEEVVSESRGDNPDPTTSYVEDQEDSDSSEEDSSHTLSHSKSESREE 402 Query: 131 YSVTDSYAEYKSFEESFPSPELFRKSDYLDWECPNLEEHMQWKNS-TLLDTSKAVAIEKA 189 + ++S EES SPE S + + Q + S + D S + ++ Sbjct: 403 QADSESSESLNFSEESPESPEDENSSSQEGLQSHSSSAESQSEESHSEEDDSDSQDSSRS 462 Query: 190 PQFSNVSAIFSTSSEDYQ 207 + SN + S+S ED Q Sbjct: 463 KEDSNSTESKSSSEEDGQ 480 >gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 precursor [Homo sapiens] Length = 497 Score = 30.8 bits (68), Expect = 0.89 Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 5/138 (3%) Query: 75 EKSLQENRSSEDTQDEKIASLR----ESVTDDLQVDSSSSNSELVSGLSLHHGMASSLLS 130 E +L +S ++Q+E ++ R + T ++ S +SE S +L H + S Sbjct: 327 EANLSSQENSSESQEEVVSESRGDNPDPTTSYVEDQEDSDSSEEDSSHTLSHSKSESREE 386 Query: 131 YSVTDSYAEYKSFEESFPSPELFRKSDYLDWECPNLEEHMQWKNS-TLLDTSKAVAIEKA 189 + ++S EES SPE S + + Q + S + D S + ++ Sbjct: 387 QADSESSESLNFSEESPESPEDENSSSQEGLQSHSSSAESQSEESHSEEDDSDSQDSSRS 446 Query: 190 PQFSNVSAIFSTSSEDYQ 207 + SN + S+S ED Q Sbjct: 447 KEDSNSTESKSSSEEDGQ 464 >gi|239753371 PREDICTED: hypothetical protein [Homo sapiens] Length = 119 Score = 30.8 bits (68), Expect = 0.89 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Query: 29 AKAEAPPGSKRKG-KVHGLSKIAEKAERSRQGGSGSGPFSP 68 A + APPGS G ++H + A R + G SGPF P Sbjct: 62 AASAAPPGSPALGNRLHAGGPLPRSASRPTRAGQESGPFLP 102 >gi|239747938 PREDICTED: hypothetical protein XP_002346476 [Homo sapiens] Length = 119 Score = 30.8 bits (68), Expect = 0.89 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Query: 29 AKAEAPPGSKRKG-KVHGLSKIAEKAERSRQGGSGSGPFSP 68 A + APPGS G ++H + A R + G SGPF P Sbjct: 62 AASAAPPGSPALGNRLHAGGPLPRSASRPTRAGQESGPFLP 102 >gi|239741833 PREDICTED: hypothetical protein XP_002342339 [Homo sapiens] Length = 119 Score = 30.8 bits (68), Expect = 0.89 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Query: 29 AKAEAPPGSKRKG-KVHGLSKIAEKAERSRQGGSGSGPFSP 68 A + APPGS G ++H + A R + G SGPF P Sbjct: 62 AASAAPPGSPALGNRLHAGGPLPRSASRPTRAGQESGPFLP 102 >gi|45597177 TBC1 domain family, member 9B (with GRAM domain) isoform b [Homo sapiens] Length = 1233 Score = 30.8 bits (68), Expect = 0.89 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 18/104 (17%) Query: 21 PTPDLGSPAKAE------APPGSKRKGKVHGLSKIAEKAERSRQGGSGSGPFSPRLGVTG 74 P P+L A E P +K G H L K ++++ +GGSG G SP Sbjct: 1070 PAPELHQDAARELQPPAAGDPQAKAGGDTH-LGKAPQESQVVVEGGSGEGQGSP------ 1122 Query: 75 EKSLQENRSSEDTQDE-KIASLRESVTDDLQVDSSSSNSELVSG 117 + S ++T+D+ ++S T LQ + + ++ LV G Sbjct: 1123 ----SQLLSDDETKDDMSMSSYSVVSTGSLQCEDLADDTVLVGG 1162 >gi|45597175 TBC1 domain family, member 9B (with GRAM domain) isoform a [Homo sapiens] Length = 1250 Score = 30.8 bits (68), Expect = 0.89 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 18/104 (17%) Query: 21 PTPDLGSPAKAE------APPGSKRKGKVHGLSKIAEKAERSRQGGSGSGPFSPRLGVTG 74 P P+L A E P +K G H L K ++++ +GGSG G SP Sbjct: 1087 PAPELHQDAARELQPPAAGDPQAKAGGDTH-LGKAPQESQVVVEGGSGEGQGSP------ 1139 Query: 75 EKSLQENRSSEDTQDE-KIASLRESVTDDLQVDSSSSNSELVSG 117 + S ++T+D+ ++S T LQ + + ++ LV G Sbjct: 1140 ----SQLLSDDETKDDMSMSSYSVVSTGSLQCEDLADDTVLVGG 1179 >gi|117606360 ADP-ribosylation factor guanine nucleotide factor 6 isoform a [Homo sapiens] Length = 1047 Score = 30.4 bits (67), Expect = 1.2 Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 21/107 (19%) Query: 56 SRQGGSGSGPFSP-RLGVTGEKS--LQENRS------SEDTQDEKIASLRESV------- 99 S + G+ SG FSP RL +GE LQEN+ + E+I+ E V Sbjct: 369 SERPGTSSGTFSPVRLDESGEDEVFLQENKQHLEKTPKPERDRERISEQEEHVKGEDEDI 428 Query: 100 -----TDDLQVDSSSSNSELVSGLSLHHGMASSLLSYSVTDSYAEYK 141 T+D SS ++ SL++ S YS DSY ++ Sbjct: 429 LGPGYTEDSTDVYSSQFETILDNTSLYYSAESLETLYSEPDSYFSFE 475 >gi|165932385 hypothetical protein LOC388341 isoform 1 [Homo sapiens] Length = 344 Score = 30.4 bits (67), Expect = 1.2 Identities = 40/174 (22%), Positives = 68/174 (39%), Gaps = 25/174 (14%) Query: 25 LGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGGSGSGPFSPRLGVTGEKSLQENRSS 84 L A A PG +R+ S + +++ + G+G P+ R+G+ E R Sbjct: 10 LAERASPGAAPGPRRERPDFWASLLLRAGDKAGRAGAGMPPYHRRVGMVQELL----RMV 65 Query: 85 EDTQDEKIASLRESVTDDLQVDSSSSNSELVSGLSLHHGMASSLLSYSVTDSYAEYKSFE 144 + E+ +L + + DL ++S+S + L S + +++ + S A Y Sbjct: 66 RQGRREEAGTLLQHLRQDLGMESTSLDDVLYRYASFRN--LVDPITHDLIISLARY---- 119 Query: 145 ESFPSPE---------LFRKSDYLDWECPNLEEHMQWKNSTLLDTSKAVAIEKA 189 P PE L R+ Y +L H QW+ L K A KA Sbjct: 120 IHCPKPEGDALGAMEKLCRQLTY------HLSPHSQWRRHRGLVKRKPQACLKA 167 >gi|41393608 reticulon 3 isoform b [Homo sapiens] Length = 1013 Score = 30.0 bits (66), Expect = 1.5 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 11/88 (12%) Query: 44 HGLSKIAEKAERSRQGGSGSGPFSPRLGVTGEKSLQENRSSEDTQDEKIASL-RESVTDD 102 H +S + AE S GG GS P LG +S + E ++SL + + + Sbjct: 11 HSISSSSFGAEPSAPGGGGSPGACPALG---------TKSCSSSCAEGLSSLCSDEPSSE 61 Query: 103 LQVDSSSSNSEL-VSGLSLHHGMASSLL 129 + S S+SE+ +GL++ HG S +L Sbjct: 62 IMTSSFLSSSEIHNTGLTILHGEKSHVL 89 >gi|21704281 junctophilin 2 isoform 1 [Homo sapiens] Length = 696 Score = 30.0 bits (66), Expect = 1.5 Identities = 38/136 (27%), Positives = 54/136 (39%), Gaps = 26/136 (19%) Query: 20 TPTPDLGSPAKAEAPPGSKRKGKVHGLSK---IAEKAERSRQGGSGSGPFSPRLGVTGEK 76 TP P+ GSP+ A PP KR G+SK ++ A G GS +P G Sbjct: 477 TPRPEGGSPSPAGTPPQPKRPRP--GVSKDGLLSPGAWNGEPSGEGSRSVTPSEGA---- 530 Query: 77 SLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSELVSGLSLHHGMASSLLSYSVTDS 136 RS E++A + LQ + S V+ +H SY+V + Sbjct: 531 ---GRRSPARPATERMA------IEALQAPPAPSREPEVALYQGYH-------SYAVRTT 574 Query: 137 YAEYKSFEESFPSPEL 152 E FE+ P PE+ Sbjct: 575 PPEPPPFEDQ-PEPEV 589 >gi|54607124 RNA binding motif protein 15B [Homo sapiens] Length = 890 Score = 30.0 bits (66), Expect = 1.5 Identities = 44/170 (25%), Positives = 62/170 (36%), Gaps = 18/170 (10%) Query: 4 LRVYTRKKREGQRLNLTPTPDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGGSG- 62 L Y+R R D G P E + G + + ERSR GSG Sbjct: 563 LEGYSRSVRSRSGERWGADGDRGLPKPWEERRKRRSLSSDRGRTTHSPYEERSRTKGSGQ 622 Query: 63 -SGPFSPRLGVTGEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSELVSGLSLH 121 S S R T E+S +EN SSE T++ SL +S +E H Sbjct: 623 QSERGSDR---TPERSRKENHSSEGTKESSSNSL----------SNSRHGAEERGHHHHH 669 Query: 122 HGMASSLLSYSVTDSYAEYKSFEESFPSPELFRKSDYLDWECPNLEEHMQ 171 H A S DS +++ E P+ + + + NL E+ Q Sbjct: 670 HEAADSSHGKKARDSERNHRTTE---AEPKPLEEPKHETKKLKNLSEYAQ 716 >gi|23238226 CDC42 effector protein 1 [Homo sapiens] Length = 391 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 21 PTPDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGGSGSGPFSPRLG 71 P + +PA + P G G GL +AE + S GG GP P LG Sbjct: 269 PAANPPAPAASSTPHGHCPNGVTAGLGPVAE-VKSSPVGGGPRGPAGPALG 318 >gi|55956788 nucleolin [Homo sapiens] Length = 710 Score = 29.6 bits (65), Expect = 2.0 Identities = 26/100 (26%), Positives = 37/100 (37%), Gaps = 14/100 (14%) Query: 14 GQRLNLTPTPDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGGSGSGPFSPRLGVT 73 G++ TP +PAKA PG +KG G + +A ++ G P G Sbjct: 86 GKKAAATPAKKTVTPAKAVTTPG--KKGATPGKALVATPGKK--------GAAIPAKGAK 135 Query: 74 GEKSLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSE 113 K N ED+ +E+ E DD D E Sbjct: 136 NGK----NAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIE 171 >gi|55741677 SET domain containing 1A [Homo sapiens] Length = 1707 Score = 29.6 bits (65), Expect = 2.0 Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 2/129 (1%) Query: 21 PTPDLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGGSGSGPFSPRLGVTGEKSLQE 80 P P + + P K G+ K + R G S L GE++ QE Sbjct: 912 PRPSTPAEEDEDDPEQEKEAGEPGRPGTKPPKRDEERGKTQGKHRKSFALDSEGEEASQE 971 Query: 81 NRSSEDTQDEKIASLRESVTDDLQVDSSSSNSELVSGLSLHHGMASSLLSYSVTDSYAEY 140 + S +D +D++ E + VD++ +E+ G +S Y+ +D + Sbjct: 972 SSSEKDEEDDE--EDEEDEDREEAVDTTKKETEVSDGEDEESDSSSKCSLYADSDGENDS 1029 Query: 141 KSFEESFPS 149 S ES S Sbjct: 1030 TSDSESSSS 1038 >gi|187937179 apoptosis-associated tyrosine kinase [Homo sapiens] Length = 1374 Score = 29.6 bits (65), Expect = 2.0 Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 13/97 (13%) Query: 19 LTPTP--DLGSPAKAEAPPGSKRKGKVHGLSKIAEKAERSRQGGSGSGPFSPRLGVTGEK 76 LTP P G+ ++ + PPG ++ A + R GG G+ RL + G Sbjct: 1103 LTPVPLRSEGNSSEFQGPPGL-----------LSGPAPQKRMGGPGTPRAPLRLALPGLP 1151 Query: 77 SLQENRSSEDTQDEKIASLRESVTDDLQVDSSSSNSE 113 + E R E+ +D + + + V S +SE Sbjct: 1152 AALEGRPEEEEEDSEDSDESDEELRCYSVQEPSEDSE 1188 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.307 0.124 0.350 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,653,112 Number of Sequences: 37866 Number of extensions: 406301 Number of successful extensions: 1686 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 29 Number of HSP's successfully gapped in prelim test: 66 Number of HSP's that attempted gapping in prelim test: 1636 Number of HSP's gapped (non-prelim): 115 length of query: 213 length of database: 18,247,518 effective HSP length: 98 effective length of query: 115 effective length of database: 14,536,650 effective search space: 1671714750 effective search space used: 1671714750 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.