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Search of human proteins with 239748307
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748307 PREDICTED: hypothetical protein XP_002346583 [Homo
sapiens]
(75 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753670 PREDICTED: hypothetical protein [Homo sapiens] 155 9e-39
gi|239748307 PREDICTED: hypothetical protein XP_002346583 [Homo ... 155 9e-39
gi|239742205 PREDICTED: hypothetical protein XP_002342425 [Homo ... 155 9e-39
gi|169214175 PREDICTED: hypothetical protein [Homo sapiens] 145 7e-36
gi|169213636 PREDICTED: hypothetical protein [Homo sapiens] 145 7e-36
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 37 0.004
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 33 0.038
gi|148746195 trichohyalin [Homo sapiens] 31 0.25
gi|219803769 trichoplein [Homo sapiens] 30 0.32
gi|14150056 trichoplein [Homo sapiens] 30 0.32
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 30 0.42
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 29 0.72
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 29 0.94
gi|226958575 RAS protein activator like 2 isoform 2 [Homo sapiens] 28 1.2
gi|4758808 RAS protein activator like 2 isoform 1 [Homo sapiens] 28 1.2
gi|149192855 HLA-B associated transcript 2-like [Homo sapiens] 28 1.2
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 28 1.6
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 28 1.6
gi|7661936 scaffold attachment factor B2 [Homo sapiens] 28 1.6
gi|41281453 serine/threonine kinase 2 [Homo sapiens] 28 1.6
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 28 1.6
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo... 28 1.6
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 28 1.6
gi|54607141 vacuolar protein sorting 13D isoform 2 [Homo sapiens] 28 1.6
gi|52426743 cisplatin resistance-associated overexpressed protei... 28 1.6
gi|19923485 cisplatin resistance-associated overexpressed protei... 28 1.6
gi|54607139 vacuolar protein sorting 13D isoform 1 [Homo sapiens] 28 1.6
gi|239752551 PREDICTED: hypothetical protein [Homo sapiens] 28 2.1
gi|118600963 Nik related kinase [Homo sapiens] 28 2.1
gi|120953300 leucine-rich repeats and IQ motif containing 1 isof... 28 2.1
>gi|239753670 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 155 bits (391), Expect = 9e-39
Identities = 75/75 (100%), Positives = 75/75 (100%)
Query: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKR 60
MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKR
Sbjct: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKR 60
Query: 61 KRREEKLLRDAQQNS 75
KRREEKLLRDAQQNS
Sbjct: 61 KRREEKLLRDAQQNS 75
>gi|239748307 PREDICTED: hypothetical protein XP_002346583 [Homo
sapiens]
Length = 75
Score = 155 bits (391), Expect = 9e-39
Identities = 75/75 (100%), Positives = 75/75 (100%)
Query: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKR 60
MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKR
Sbjct: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKR 60
Query: 61 KRREEKLLRDAQQNS 75
KRREEKLLRDAQQNS
Sbjct: 61 KRREEKLLRDAQQNS 75
>gi|239742205 PREDICTED: hypothetical protein XP_002342425 [Homo
sapiens]
Length = 75
Score = 155 bits (391), Expect = 9e-39
Identities = 75/75 (100%), Positives = 75/75 (100%)
Query: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKR 60
MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKR
Sbjct: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKR 60
Query: 61 KRREEKLLRDAQQNS 75
KRREEKLLRDAQQNS
Sbjct: 61 KRREEKLLRDAQQNS 75
>gi|169214175 PREDICTED: hypothetical protein [Homo sapiens]
Length = 73
Score = 145 bits (366), Expect = 7e-36
Identities = 72/75 (96%), Positives = 73/75 (97%), Gaps = 2/75 (2%)
Query: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKR 60
MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQE+EEFKERL R
Sbjct: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQEIEEFKERL--R 58
Query: 61 KRREEKLLRDAQQNS 75
KRREEKLLRDAQQNS
Sbjct: 59 KRREEKLLRDAQQNS 73
>gi|169213636 PREDICTED: hypothetical protein [Homo sapiens]
Length = 73
Score = 145 bits (366), Expect = 7e-36
Identities = 72/75 (96%), Positives = 73/75 (97%), Gaps = 2/75 (2%)
Query: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKR 60
MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQE+EEFKERL R
Sbjct: 1 MGVKLEIFRMIIYLTFPVAMFWVSNQAEWFEDDVIQRKRELWPPEKLQEIEEFKERL--R 58
Query: 61 KRREEKLLRDAQQNS 75
KRREEKLLRDAQQNS
Sbjct: 59 KRREEKLLRDAQQNS 73
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 36.6 bits (83), Expect = 0.004
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 22 WVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKRKRREEKL 67
W + W + + ++K +LW EK+QE E+ E+ K + +EEK+
Sbjct: 758 WEQEEKMWEQQRLPEQKEKLWEHEKMQEQEKIWEQEEKMRDQEEKM 803
Score = 33.5 bits (75), Expect = 0.038
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 22 WVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKRKRREEKL 67
W + EW + + ++K +LW EK+QE EE ++ R +E++
Sbjct: 481 WEQEEKEWQQQRLPEQKEKLWEQEKMQEQEEKIWEQEEKIRDQEEM 526
Score = 33.1 bits (74), Expect = 0.050
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 26 QAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKRKRREEKLLRDAQQ 73
+ E E +++++ W EK++E E +ER K+ R EE+++R+ ++
Sbjct: 688 EQEKMEKKTQEQEKKTWDQEKMREEESMRER-EKKMREEEEMMREQEE 734
Score = 32.3 bits (72), Expect = 0.085
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 22 WVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKRKRREEKLLRDAQQ 73
W + W + + ++K +LW EK+QE E+ +E+ ++ +EK+ + Q+
Sbjct: 648 WEQEEKMWEQQRLPEQKEKLWEHEKMQEQEKMQEQ-EEKIWEQEKMEKKTQE 698
Score = 30.0 bits (66), Expect = 0.42
Identities = 15/50 (30%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 25 NQAEWFEDDVIQRKRELWPPE-KLQELEEFKERLRKRKRREEKLLRDAQQ 73
+Q E E +++++ W E K++E E +ER K+ R EE+++R+ ++
Sbjct: 562 DQEERMEKKTQEQEKKTWDQEEKMREEERMRER-EKKMREEEEMMREQEE 610
Score = 27.7 bits (60), Expect = 2.1
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 36 QRKRELWPPEKLQELEEFKERLRKRKRREEKLLRDAQQ 73
Q K+ EK+QE E +ER K+ R EE+ +R+ ++
Sbjct: 435 QEKKTRDQEEKMQEEERIRER-EKKMREEEETMREQEE 471
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 31 EDDVIQRKRELWPPE-KLQELEEFKERLRKRKRREEKLLRDAQQ 73
E+ + +++ ++W E K++E EE R +R +EK +R+ +Q
Sbjct: 347 EEQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQ 390
Score = 26.2 bits (56), Expect = 6.1
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 29 WFEDDVIQRKRELWPPEKLQELEEFKERLRKRKRREEKLLRDAQQ 73
W +++ I+ + E+W EK +E + +E+ +RD +Q
Sbjct: 514 WEQEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWEQEEKMRDQEQ 558
Score = 25.8 bits (55), Expect = 7.9
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Query: 31 EDDVIQRKRELWPPE--------KLQELEEFKERLRKRKRREEKLLRDAQQ 73
E + +++ ++W E K++E EE R KR R +EK LR+ ++
Sbjct: 285 EKKIRKQEEKMWRQEERLREQEGKMREQEEKMWRQEKRLREQEKELREQEK 335
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 33.5 bits (75), Expect = 0.038
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 22 WVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKRKRREEKL 67
W + EW + + ++K +LW EK+QE EE ++ R +E++
Sbjct: 423 WEQEEKEWQQQRLPEQKEKLWEQEKMQEQEEKIWEQEEKIRDQEEM 468
Score = 30.0 bits (66), Expect = 0.42
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 9/53 (16%)
Query: 29 WFEDDVIQRKRE-------LWPPE-KLQELEEFKERLRKRKRREEKLLRDAQQ 73
W +D+ ++ K E +W E K+QE E +ER K+ R EE+ +R+ ++
Sbjct: 362 WEQDERLREKEERMREQEKMWEQEEKMQEEERIRER-EKKMREEEETMREQEE 413
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 22 WVSNQAEWFEDDVIQRKRELWPPE-KLQELEEFKERLRKRKRREEKLLRDAQQ 73
W + E +++++ W E K++E E +ER K+ R EE+++R+ ++
Sbjct: 530 WQQEEKMREEKKTQEQEKKTWDQEEKMREEERMRER-EKKMREEEEMMREQEE 581
Score = 27.3 bits (59), Expect = 2.7
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 22 WVSNQAEWF--EDDVIQRKREL-W-PPEKLQELEEFKERLRKRKRREEKLLRDAQQ 73
W + W E+D +Q + E+ W EK+QE EE ++ R +E+ +R+ ++
Sbjct: 612 WEQEEKMWEQEEEDKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQEE 667
Score = 26.9 bits (58), Expect = 3.6
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Query: 31 EDDVIQRKRELWPPE--------KLQELEEFKERLRKRKRREEKLLRDAQQ 73
E + +++ ++W E K++E EE R KR R +EK LR+ ++
Sbjct: 247 EKKIRKQEEKMWRQEERLREQEGKMREQEEKMRRQEKRLREQEKELREQEK 297
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 31 EDDVIQRKRELWPPE-KLQELEEFKERLRKRKRREEKLLRDAQQ 73
E+ + +++ ++W E K++E EE R +R +EK +R+ +Q
Sbjct: 309 EEQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQ 352
Score = 26.2 bits (56), Expect = 6.1
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 29 WFEDDVIQRKRELWPPEKLQELEEFKERLRKRKRREEKLLRDAQQ 73
W +++ I+ + E+W EK +E + +E+ +RD +Q
Sbjct: 456 WEQEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWEQEEKMRDQEQ 500
Score = 25.8 bits (55), Expect = 7.9
Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
Query: 22 WVSNQAEWFEDDVIQRKRE-------LWPPE-KLQELEEFKERLRK-----RKRREEKLL 68
W + W +D+ ++ K E +W E K++E ++ +E+ +K K REE+ +
Sbjct: 503 WDQEERMWEQDERLREKEERMREQKKMWQQEEKMREEKKTQEQEKKTWDQEEKMREEERM 562
Query: 69 RDAQQ 73
R+ ++
Sbjct: 563 REREK 567
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 30.8 bits (68), Expect = 0.25
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 20 MFWVSNQAEWFEDDVIQRKRELW----PPEKLQELEEFKERLRKRKRREEKLLRDAQQ 73
+F + EW + + + RK E P++ +EL+E +E+LRK +R+E L R+ Q+
Sbjct: 237 VFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQE--LRRERQE 292
Score = 26.2 bits (56), Expect = 6.1
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 36 QRKRELWPPEKLQELEEFKERLRKRKRREEKLLRDAQQ 73
+++REL E+ E +E E+ R R+RR+E+L R Q+
Sbjct: 143 EQERELAEGEEQSEKQERLEQ-RDRQRRDEELWRQRQE 179
>gi|219803769 trichoplein [Homo sapiens]
Length = 498
Score = 30.4 bits (67), Expect = 0.32
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 24 SNQAEWFEDDVIQR-----KRELWPPEKLQELEEFKERLRKRKRREEKLL 68
S QAEW QR +RE EK + LE +E+LR+ + E+ LL
Sbjct: 49 SKQAEWSSKTSYQRSMHAYQREKMKEEKRRSLEARREKLRQLMQEEQDLL 98
>gi|14150056 trichoplein [Homo sapiens]
Length = 498
Score = 30.4 bits (67), Expect = 0.32
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 24 SNQAEWFEDDVIQR-----KRELWPPEKLQELEEFKERLRKRKRREEKLL 68
S QAEW QR +RE EK + LE +E+LR+ + E+ LL
Sbjct: 49 SKQAEWSSKTSYQRSMHAYQREKMKEEKRRSLEARREKLRQLMQEEQDLL 98
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 30.0 bits (66), Expect = 0.42
Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 29 WFEDDVIQRKRELW-PPEKLQELEEFKERLRKRKRREEKL 67
W +++ I+ + E+W EK+ E E+ +++ K R+EEK+
Sbjct: 465 WRQEEKIREQEEIWRQKEKMHEQEKIRKQEEKVWRQEEKM 504
Score = 26.9 bits (58), Expect = 3.6
Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 7/52 (13%)
Query: 29 WFEDDVIQRKREL-WPPE-KLQELEE-----FKERLRKRKRREEKLLRDAQQ 73
W +++ ++R E+ W E K++ELEE K R ++ KR+EE+ +R+ ++
Sbjct: 359 WEKEEKMRRLEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEK 410
Score = 25.8 bits (55), Expect = 7.9
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 23 VSNQAEWFEDDVIQRKRELW-PPEKLQELEEF---KERL---RKRKRREEKLLRDAQQ 73
+ Q + E++ Q + E+W EK++E EE KE++ K +++EEK+ R ++
Sbjct: 446 IHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKEKMHEQEKIRKQEEKVWRQEEK 503
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 29.3 bits (64), Expect = 0.72
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 29 WFEDDVIQRKRELW-PPEKLQELEEFKERLRKRKRREEKLLRDAQQ 73
W +++ I+ + E+W EK+ E E+ E KR+ +E+K+ R ++
Sbjct: 534 WRQEEKIREQEEMWREEEKMHEQEKIWEE-EKRQEQEDKMWRQEEK 578
Score = 28.9 bits (63), Expect = 0.94
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 29 WFEDDVIQRKRELWPPEKLQELEEFKERLRKR-KRREEKLLRDAQQ 73
W E++ + + ++W EK QE E+ R ++ + +EEK+ R ++
Sbjct: 547 WREEEKMHEQEKIWEEEKRQEQEDKMWRQEEKIREQEEKVWRQEEK 592
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/52 (32%), Positives = 34/52 (65%), Gaps = 7/52 (13%)
Query: 29 WFEDDVIQRKREL-WPPE-KLQELEE-----FKERLRKRKRREEKLLRDAQQ 73
W +++ ++R+ E+ W E K++ELEE K R ++ KR+EE+ +R+ ++
Sbjct: 373 WEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEK 424
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 23 VSNQAEWFEDDVIQRKRELW-PPEKLQELEEFKERLRKRKRREEKLLRDAQQ 73
+ Q + E++ Q + E+W EK+ E EE + K +EEK+ + ++
Sbjct: 460 IHEQEKIREEEKRQEQEEMWRQEEKIHEQEEIWRQKEKMHEQEEKIRKQEEK 511
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 28.9 bits (63), Expect = 0.94
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 20/72 (27%)
Query: 23 VSNQAEWFE---DDVIQRKRELWPP----------------EKLQELEEFKERLRK-RKR 62
VSN+AE + + V Q K+EL+ E QE+EE KE++RK K
Sbjct: 1625 VSNEAERIQHVVEAVRQEKQELYGKLRSTEANKKETEKQLQEAEQEMEEMKEKMRKFAKS 1684
Query: 63 REEKLLRDAQQN 74
+++K+L ++N
Sbjct: 1685 KQQKILELEEEN 1696
>gi|226958575 RAS protein activator like 2 isoform 2 [Homo sapiens]
Length = 1280
Score = 28.5 bits (62), Expect = 1.2
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 22 WVSNQAEWFED--DVIQRKRELWPPEKL-QELEEFKERLRKRKRR----EEKLLRDAQQ 73
WV N ++ ED + Q E EK QE+ + KERLR RR E +LL QQ
Sbjct: 1103 WVLNNGQYEEDVEETEQNLDEAKHAEKYEQEITKLKERLRVSSRRLEEYERRLLVQEQQ 1161
>gi|4758808 RAS protein activator like 2 isoform 1 [Homo sapiens]
Length = 1139
Score = 28.5 bits (62), Expect = 1.2
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 22 WVSNQAEWFED--DVIQRKRELWPPEKL-QELEEFKERLRKRKRR----EEKLLRDAQQ 73
WV N ++ ED + Q E EK QE+ + KERLR RR E +LL QQ
Sbjct: 962 WVLNNGQYEEDVEETEQNLDEAKHAEKYEQEITKLKERLRVSSRRLEEYERRLLVQEQQ 1020
>gi|149192855 HLA-B associated transcript 2-like [Homo sapiens]
Length = 2229
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 24 SNQAEWFEDDVIQRKRELWPPEKL---QELEEFKERLRKRKRREEKLLRD 70
S+ F I+ K + PP + E+ E ER RKR+ EE+ R+
Sbjct: 470 SSMGSMFRQQSIEDKEDKPPPRQKFIQSEMSEAVERARKRREEEERRARE 519
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/52 (32%), Positives = 34/52 (65%), Gaps = 7/52 (13%)
Query: 29 WFEDDVIQRKREL-WPPE-KLQELEE-----FKERLRKRKRREEKLLRDAQQ 73
W +++ ++R+ E+ W E K++ELEE K R ++ KR+EE+ +R+ ++
Sbjct: 326 WEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEK 377
Score = 27.3 bits (59), Expect = 2.7
Identities = 12/44 (27%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 31 EDDVIQRKRELWPPEK-LQELEEFKERLRKRKRREEKLLRDAQQ 73
E+ + +++ ++W E+ +QE EE R ++ R +EK +R+ ++
Sbjct: 410 EEKMGEQEEKMWEQEEEMQEQEEKMRRQEEKIREQEKKIREQEE 453
Score = 25.8 bits (55), Expect = 7.9
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 29 WFEDDVIQRKRELWPPEKLQELEEFKERLRKRKRREEKLLRDAQQ 73
W +++ IQ + E K+QE EE ++ RR+E+++ + ++
Sbjct: 291 WRQEEKIQEREE-----KIQEQEEKIREQEEKMRRQEEMMWEKEE 330
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/52 (32%), Positives = 34/52 (65%), Gaps = 7/52 (13%)
Query: 29 WFEDDVIQRKREL-WPPE-KLQELEE-----FKERLRKRKRREEKLLRDAQQ 73
W +++ ++R+ E+ W E K++ELEE K R ++ KR+EE+ +R+ ++
Sbjct: 420 WEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEK 471
Score = 26.9 bits (58), Expect = 3.6
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 23 VSNQAEWFEDDVIQRKRELW-PPEKLQELEEFKERLRKRKRREEKLLRDAQQ 73
+ Q + E++ Q + E+W EK++E EE + K +EEK+ + ++
Sbjct: 507 IHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKEKIHEQEEKIRKQEEK 558
Score = 26.2 bits (56), Expect = 6.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 45 EKLQELEEFKERLRKRKRREEKLLRDAQQ 73
EK+QE EE R ++ R +EK +R+ ++
Sbjct: 627 EKMQEQEEKMRRQEEKIREQEKKIREQEE 655
>gi|7661936 scaffold attachment factor B2 [Homo sapiens]
Length = 953
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 36 QRKRELWPPEKLQELEEFKERLRKRKRREEKLLRDAQQ 73
+R+RE E+ Q LE F ER K + + E+L + Q+
Sbjct: 637 ERRREREQREREQRLEAFHERKEKARLQRERLQLECQR 674
>gi|41281453 serine/threonine kinase 2 [Homo sapiens]
Length = 1235
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 36 QRKRELWPPEKLQELEEFKERLRKRKRR-EEKLLRDAQQ 73
Q+ +EL E QEL+E++E+LR RK+ EE+ R Q+
Sbjct: 1162 QKLKEL-DEEHSQELKEWREKLRPRKKTLEEEFARKLQE 1199
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 28.1 bits (61), Expect = 1.6
Identities = 19/50 (38%), Positives = 34/50 (68%), Gaps = 6/50 (12%)
Query: 25 NQAEWFEDDVIQRKRELWPPEKL--QELEEFKE-RLRK---RKRREEKLL 68
+QA D+++R+ EL E+L QE+++ KE +LR+ R+RREE+++
Sbjct: 530 HQANLLRQDLMRRQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMM 579
>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform
b [Homo sapiens]
Length = 1524
Score = 28.1 bits (61), Expect = 1.6
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 51 EEFKERLRKRKRREEKLLRDAQQNS 75
E+ KE+ +K K ++EKL D Q+NS
Sbjct: 641 EKLKEQEQKMKEKQEKLKEDEQRNS 665
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform
a [Homo sapiens]
Length = 1556
Score = 28.1 bits (61), Expect = 1.6
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 51 EEFKERLRKRKRREEKLLRDAQQNS 75
E+ KE+ +K K ++EKL D Q+NS
Sbjct: 673 EKLKEQEQKMKEKQEKLKEDEQRNS 697
>gi|54607141 vacuolar protein sorting 13D isoform 2 [Homo sapiens]
Length = 4363
Score = 28.1 bits (61), Expect = 1.6
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 7/37 (18%)
Query: 44 PEKLQELEEFKERLRKRKRR-------EEKLLRDAQQ 73
PEK+Q+ + KE+L +R+R+ EEK D QQ
Sbjct: 91 PEKIQDFNDEKEKLLERERKKALLQALEEKWKNDRQQ 127
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 21 FWVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKRKR---REEKLLRDAQQ 73
F + A+ DD + K+ + + +EE KE+LRKR R+E+L ++ Q+
Sbjct: 198 FLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEPDRDERLKKEKQE 253
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 21 FWVSNQAEWFEDDVIQRKRELWPPEKLQELEEFKERLRKRKR---REEKLLRDAQQ 73
F + A+ DD + K+ + + +EE KE+LRKR R+E+L ++ Q+
Sbjct: 198 FLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEPDRDERLKKEKQE 253
>gi|54607139 vacuolar protein sorting 13D isoform 1 [Homo sapiens]
Length = 4388
Score = 28.1 bits (61), Expect = 1.6
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 7/37 (18%)
Query: 44 PEKLQELEEFKERLRKRKRR-------EEKLLRDAQQ 73
PEK+Q+ + KE+L +R+R+ EEK D QQ
Sbjct: 91 PEKIQDFNDEKEKLLERERKKALLQALEEKWKNDRQQ 127
>gi|239752551 PREDICTED: hypothetical protein [Homo sapiens]
Length = 238
Score = 27.7 bits (60), Expect = 2.1
Identities = 13/62 (20%), Positives = 34/62 (54%), Gaps = 10/62 (16%)
Query: 22 WVSNQAEWFEDDVIQRKRELW-PPEKLQELEEFK---------ERLRKRKRREEKLLRDA 71
W + W + + ++K ++W E+L+E EE E++R++K+ +E+ +++
Sbjct: 64 WEQEEKMWEQQRLPEQKEKMWEQDERLREKEERMREQKMWQQVEKMREKKKTQEEKMQEQ 123
Query: 72 QQ 73
++
Sbjct: 124 EE 125
>gi|118600963 Nik related kinase [Homo sapiens]
Length = 1582
Score = 27.7 bits (60), Expect = 2.1
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 37 RKRELWPPEKLQELEEFKERLRKRKRREEKLLRDAQQ 73
R + W PEKL EL + + R ++R+RR E + ++
Sbjct: 705 RAKSSWRPEKL-ELSDLEARRQRRQRRWEDIFNQHEE 740
>gi|120953300 leucine-rich repeats and IQ motif containing 1 isoform
1 [Homo sapiens]
Length = 1722
Score = 27.7 bits (60), Expect = 2.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 28 EWFEDDVIQRKRELWPPEKLQELEEFKERLRKRKRREEK 66
EW E + R++E ++L+E + KE +K+K E K
Sbjct: 320 EWKEKEAKIRQKEEENRKRLEEEQRIKEERKKQKEEERK 358
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,882,013
Number of Sequences: 37866
Number of extensions: 114928
Number of successful extensions: 1724
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 1436
Number of HSP's gapped (non-prelim): 308
length of query: 75
length of database: 18,247,518
effective HSP length: 47
effective length of query: 28
effective length of database: 16,467,816
effective search space: 461098848
effective search space used: 461098848
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.