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Search of human proteins with 239747122
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo
sapiens]
(598 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo ... 1227 0.0
gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo ... 1199 0.0
gi|239757014 PREDICTED: hypothetical protein [Homo sapiens] 528 e-150
gi|148528975 LON peptidase N-terminal domain and ring finger 2 [... 218 1e-56
gi|73747840 LON peptidase N-terminal domain and ring finger 3 is... 43 7e-04
gi|37622896 LON peptidase N-terminal domain and ring finger 3 is... 43 7e-04
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 37 0.040
gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo ... 37 0.040
gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo ... 37 0.040
gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo ... 37 0.040
gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo ... 37 0.040
gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo s... 37 0.040
gi|239756899 PREDICTED: hypothetical protein [Homo sapiens] 37 0.052
gi|169204628 PREDICTED: similar to hCG2045644 [Homo sapiens] 37 0.052
gi|113427491 PREDICTED: hypothetical protein [Homo sapiens] 37 0.052
gi|239745902 PREDICTED: hypothetical protein [Homo sapiens] 37 0.052
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 37 0.052
gi|239750652 PREDICTED: hypothetical protein XP_002347499 [Homo ... 36 0.12
gi|239744960 PREDICTED: hypothetical protein XP_002343317 [Homo ... 36 0.12
gi|110624765 POU domain, class 3, transcription factor 1 [Homo s... 36 0.12
gi|21735550 mitogen-activated protein kinase kinase kinase 10 [H... 35 0.15
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 35 0.20
gi|48526509 translocase of inner mitochondrial membrane 50 homol... 35 0.20
gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ... 35 0.26
gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo ... 35 0.26
gi|87298836 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Ho... 35 0.26
gi|23200002 NOL1/NOP2/Sun domain family, member 5C isoform 2 [Ho... 35 0.26
gi|23200000 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Ho... 35 0.26
gi|14589876 embryonal Fyn-associated substrate isoform 2 [Homo s... 34 0.34
gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo sa... 34 0.34
>gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo
sapiens]
Length = 598
Score = 1227 bits (3175), Expect = 0.0
Identities = 598/598 (100%), Positives = 598/598 (100%)
Query: 1 MSHQGPPLALSNQLRRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQC 60
MSHQGPPLALSNQLRRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQC
Sbjct: 1 MSHQGPPLALSNQLRRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQC 60
Query: 61 PGCDCGEPIAQRLEEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQCLRLGNALARADRL 120
PGCDCGEPIAQRLEEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQCLRLGNALARADRL
Sbjct: 61 PGCDCGEPIAQRLEEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQCLRLGNALARADRL 120
Query: 121 PVALGAFCVALRLEALRPEELGELAELAGGLVCPGLRERPLFTGKPGGELEAPALRGAGA 180
PVALGAFCVALRLEALRPEELGELAELAGGLVCPGLRERPLFTGKPGGELEAPALRGAGA
Sbjct: 121 PVALGAFCVALRLEALRPEELGELAELAGGLVCPGLRERPLFTGKPGGELEAPALRGAGA 180
Query: 181 ERPQALRVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLRMLISFPRPPEQL 240
ERPQALRVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLRMLISFPRPPEQL
Sbjct: 181 ERPQALRVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLRMLISFPRPPEQL 240
Query: 241 CKALCSTKKDPRTWGAEGSTERVGATGVHRQLEEDADGKLPFVTPGACLGPEDHQIPKAS 300
CKALCSTKKDPRTWGAEGSTERVGATGVHRQLEEDADGKLPFVTPGACLGPEDHQIPKAS
Sbjct: 241 CKALCSTKKDPRTWGAEGSTERVGATGVHRQLEEDADGKLPFVTPGACLGPEDHQIPKAS 300
Query: 301 GASEAEERQGQWLPVSRDLAATTEAYLLVPQPTGGHTPGLWALPRTLLLHGTCGQKNGYH 360
GASEAEERQGQWLPVSRDLAATTEAYLLVPQPTGGHTPGLWALPRTLLLHGTCGQKNGYH
Sbjct: 301 GASEAEERQGQWLPVSRDLAATTEAYLLVPQPTGGHTPGLWALPRTLLLHGTCGQKNGYH 360
Query: 361 LDHGVSRSRAALPGEERAPRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIR 420
LDHGVSRSRAALPGEERAPRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIR
Sbjct: 361 LDHGVSRSRAALPGEERAPRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIR 420
Query: 421 AVPAMDTALLPPLVFFASLSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGF 480
AVPAMDTALLPPLVFFASLSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGF
Sbjct: 421 AVPAMDTALLPPLVFFASLSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGF 480
Query: 481 SARACERVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQG 540
SARACERVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQG
Sbjct: 481 SARACERVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQG 540
Query: 541 AWEVSVRPSLPAVSVRVHRCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW 598
AWEVSVRPSLPAVSVRVHRCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW
Sbjct: 541 AWEVSVRPSLPAVSVRVHRCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW 598
>gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo
sapiens]
Length = 616
Score = 1199 bits (3103), Expect = 0.0
Identities = 584/585 (99%), Positives = 585/585 (100%)
Query: 14 LRRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQRL 73
+RRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQRL
Sbjct: 32 VRRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQRL 91
Query: 74 EEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQCLRLGNALARADRLPVALGAFCVALRL 133
EEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQCLRLGNALARADRLPVALGAFCVALRL
Sbjct: 92 EEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQCLRLGNALARADRLPVALGAFCVALRL 151
Query: 134 EALRPEELGELAELAGGLVCPGLRERPLFTGKPGGELEAPALRGAGAERPQALRVNVVLS 193
EALRPEELGELAELAGGLVCPGLRERPLFTGKPGGELEAPALRGAGAERPQALRVNVVLS
Sbjct: 152 EALRPEELGELAELAGGLVCPGLRERPLFTGKPGGELEAPALRGAGAERPQALRVNVVLS 211
Query: 194 RKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLRMLISFPRPPEQLCKALCSTKKDPRT 253
RKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLRMLISFPRPPEQLCKALCSTKKDPRT
Sbjct: 212 RKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLRMLISFPRPPEQLCKALCSTKKDPRT 271
Query: 254 WGAEGSTERVGATGVHRQLEEDADGKLPFVTPGACLGPEDHQIPKASGASEAEERQGQWL 313
WGAEGSTERVGATGVHRQLEEDADGKLPFVTPGACLGPEDHQIPKASGASEAEERQGQWL
Sbjct: 272 WGAEGSTERVGATGVHRQLEEDADGKLPFVTPGACLGPEDHQIPKASGASEAEERQGQWL 331
Query: 314 PVSRDLAATTEAYLLVPQPTGGHTPGLWALPRTLLLHGTCGQKNGYHLDHGVSRSRAALP 373
PVSRDLAATTEAYLLVPQPTGGHTPGLWALPRTLLLHGTCGQKNGYHLDHGVSRSRAALP
Sbjct: 332 PVSRDLAATTEAYLLVPQPTGGHTPGLWALPRTLLLHGTCGQKNGYHLDHGVSRSRAALP 391
Query: 374 GEERAPRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPL 433
GEERAPRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPL
Sbjct: 392 GEERAPRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPL 451
Query: 434 VFFASLSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRP 493
VFFASLSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRP
Sbjct: 452 VFFASLSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRP 511
Query: 494 ARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAV 553
ARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAV
Sbjct: 512 ARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAV 571
Query: 554 SVRVHRCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW 598
SVRVHRCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW
Sbjct: 572 SVRVHRCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW 616
>gi|239757014 PREDICTED: hypothetical protein [Homo sapiens]
Length = 281
Score = 528 bits (1360), Expect = e-150
Identities = 258/280 (92%), Positives = 262/280 (93%)
Query: 319 LAATTEAYLLVPQPTGGHTPGLWALPRTLLLHGTCGQKNGYHLDHGVSRSRAALPGEERA 378
L+AT ++ + GG G LLLHGTCGQKNGYHLDHGVSRSRAALPGEERA
Sbjct: 2 LSATIQSSPCIRSSDGGSQQGWMPESHRLLLHGTCGQKNGYHLDHGVSRSRAALPGEERA 61
Query: 379 PRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFAS 438
PRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFAS
Sbjct: 62 PRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFAS 121
Query: 439 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRPARRRE 498
LSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRPARRRE
Sbjct: 122 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRPARRRE 181
Query: 499 RALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVH 558
RALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVH
Sbjct: 182 RALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVH 241
Query: 559 RCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW 598
RCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW
Sbjct: 242 RCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW 281
>gi|148528975 LON peptidase N-terminal domain and ring finger 2
[Homo sapiens]
Length = 754
Score = 218 bits (556), Expect = 1e-56
Identities = 133/222 (59%), Positives = 140/222 (63%), Gaps = 45/222 (20%)
Query: 49 ISTEPVPPPP--QCPGCDCGEPIAQRLEEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQ 106
+S EPVPPPP QCPGCD EPIAQRLEEGDEAFR +Y+ AA LFRS LA LAQPDRG
Sbjct: 1 MSPEPVPPPPPPQCPGCDRAEPIAQRLEEGDEAFRAGDYEMAAELFRSMLAGLAQPDRGL 60
Query: 107 CLRLGNALARADRLPVALGAFCVALRLEALRPEELGELAELAGGLV-CPGLRERPLFTGK 165
CLRLG+ALARA RLP ALGAF A RL ALRPE EL ELAGGLV GLR+RPL
Sbjct: 61 CLRLGDALARAGRLPEALGAFRGAARLGALRPE---ELEELAGGLVRAVGLRDRPLSAEN 117
Query: 166 PGGELEAPALRG---------------------------------------AGAERPQAL 186
PGGE EAP G G RPQ
Sbjct: 118 PGGEPEAPGEGGPAPEPRAPRDLLGCPRCRRLLHKPVTLPCGLTVCKRCVEPGPARPQVR 177
Query: 187 RVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLR 228
RVNVVLS LE+CFPA+C L RL GQARSLQRQQQPEAALLR
Sbjct: 178 RVNVVLSGLLEKCFPAECRLRRLAGQARSLQRQQQPEAALLR 219
>gi|73747840 LON peptidase N-terminal domain and ring finger 3
isoform 1 [Homo sapiens]
Length = 759
Score = 43.1 bits (100), Expect = 7e-04
Identities = 25/57 (43%), Positives = 32/57 (56%)
Query: 172 APALRGAGAERPQALRVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLR 228
A R AG + P LRVNVVLS L + FP +L + L R++Q EAALL+
Sbjct: 209 ARGARRAGQQPPPPLRVNVVLSGLLGKLFPGPARASQLRHEGNRLYRERQVEAALLK 265
>gi|37622896 LON peptidase N-terminal domain and ring finger 3
isoform 2 [Homo sapiens]
Length = 718
Score = 43.1 bits (100), Expect = 7e-04
Identities = 25/57 (43%), Positives = 32/57 (56%)
Query: 172 APALRGAGAERPQALRVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLR 228
A R AG + P LRVNVVLS L + FP +L + L R++Q EAALL+
Sbjct: 209 ARGARRAGQQPPPPLRVNVVLSGLLGKLFPGPARASQLRHEGNRLYRERQVEAALLK 265
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 37.4 bits (85), Expect = 0.040
Identities = 37/135 (27%), Positives = 49/135 (36%), Gaps = 19/135 (14%)
Query: 407 HPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAA----GIRLGCSPSH------LLG 456
HPP + AV+ +RA PA LLP ++ A A +R + +H G
Sbjct: 58 HPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTG 117
Query: 457 RDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRR 516
R RP P P P T + E P R P R RA C R
Sbjct: 118 RRWRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGC---------R 168
Query: 517 RRRSSSRTRLPSSSG 531
+R+R P +G
Sbjct: 169 SSPFPARSRTPGEAG 183
>gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 37.4 bits (85), Expect = 0.040
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 10/84 (11%)
Query: 391 SVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCS 450
S+ G + Y + PPV + PGI A P + PP+ L PA G +G
Sbjct: 160 SIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPP---PGMRPPMGPPIGLPPARGTPIGMP 216
Query: 451 PSHLLGRDHLSRPRPRPTRGDPPP 474
P + RP P RG PPP
Sbjct: 217 PPGM-------RPPPPGIRGPPPP 233
>gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 37.4 bits (85), Expect = 0.040
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 10/84 (11%)
Query: 391 SVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCS 450
S+ G + Y + PPV + PGI A P + PP+ L PA G +G
Sbjct: 160 SIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPP---PGMRPPMGPPIGLPPARGTPIGMP 216
Query: 451 PSHLLGRDHLSRPRPRPTRGDPPP 474
P + RP P RG PPP
Sbjct: 217 PPGM-------RPPPPGIRGPPPP 233
>gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 37.4 bits (85), Expect = 0.040
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 10/84 (11%)
Query: 391 SVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCS 450
S+ G + Y + PPV + PGI A P + PP+ L PA G +G
Sbjct: 160 SIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPP---PGMRPPMGPPIGLPPARGTPIGMP 216
Query: 451 PSHLLGRDHLSRPRPRPTRGDPPP 474
P + RP P RG PPP
Sbjct: 217 PPGM-------RPPPPGIRGPPPP 233
>gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 37.4 bits (85), Expect = 0.040
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 10/84 (11%)
Query: 391 SVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCS 450
S+ G + Y + PPV + PGI A P + PP+ L PA G +G
Sbjct: 160 SIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPP---PGMRPPMGPPIGLPPARGTPIGMP 216
Query: 451 PSHLLGRDHLSRPRPRPTRGDPPP 474
P + RP P RG PPP
Sbjct: 217 PPGM-------RPPPPGIRGPPPP 233
>gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 37.4 bits (85), Expect = 0.040
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 10/84 (11%)
Query: 391 SVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCS 450
S+ G + Y + PPV + PGI A P + PP+ L PA G +G
Sbjct: 160 SIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPP---PGMRPPMGPPIGLPPARGTPIGMP 216
Query: 451 PSHLLGRDHLSRPRPRPTRGDPPP 474
P + RP P RG PPP
Sbjct: 217 PPGM-------RPPPPGIRGPPPP 233
>gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 37.0 bits (84), Expect = 0.052
Identities = 41/128 (32%), Positives = 48/128 (37%), Gaps = 26/128 (20%)
Query: 463 PRPRPTRGDP-----PPSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRR 517
P P RGDP PP+P+ AR + A R R R L G R
Sbjct: 55 PAGEPRRGDPGVAPSPPAPEDS-DARGEDGAAAERRPEPRTRDLSGARGQTTGGEGREGA 113
Query: 518 RRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSV---RVHRC-----------RRL 563
+ + LP S+ RRP A +RP PA V RV C RRL
Sbjct: 114 QTREGKMGLPDSA----RRP--RAPRTPLRPERPAPGVPGGRVAPCTCTSGSPSPRPRRL 167
Query: 564 EVGGHGSP 571
V G GSP
Sbjct: 168 RVSGRGSP 175
>gi|169204628 PREDICTED: similar to hCG2045644 [Homo sapiens]
Length = 363
Score = 37.0 bits (84), Expect = 0.052
Identities = 46/202 (22%), Positives = 74/202 (36%), Gaps = 43/202 (21%)
Query: 15 RRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQRLE 74
RR S+ P+P++ P P P GR+ ++ PVP P C P+ +
Sbjct: 129 RRHVTSSQPPLPATQIRPR----NPCPAGRAGGHVAGAPVPAAPWCMYLWRSSPLGSLIT 184
Query: 75 EGDEAFRQSEYQKAAGLFRSTLARLAQPD----------RGQCLRLGNALARADRLPVAL 124
++ FR + ++ +++ L P RGQC G + A A
Sbjct: 185 GNNQRFRDHPGEN-RNIYIASIPPLGVPQDMPSPGLAGRRGQCASPGTSRAAA------- 236
Query: 125 GAFCVALRLEALRPEELGELAELAGGLVCPGLRERPLFTGKPGGELEAPALRGAGAERPQ 184
A R A ++A AG + L P TG R +
Sbjct: 237 -----AGRARARTGSPSSDVAAAAGRITLLALCWYPFETGL----------------RRE 275
Query: 185 ALRVNVVLSRKLERCFPAKCPL 206
AL V V++ ++ CF ++ PL
Sbjct: 276 ALEVPAVVNERIASCFFSRQPL 297
>gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 37.0 bits (84), Expect = 0.052
Identities = 41/128 (32%), Positives = 48/128 (37%), Gaps = 26/128 (20%)
Query: 463 PRPRPTRGDP-----PPSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRR 517
P P RGDP PP+P+ AR + A R R R L G R
Sbjct: 55 PAGEPRRGDPGVAPSPPAPEDS-DARGEDGAAAERRPEPRTRDLSGARGQTTGGEGREGA 113
Query: 518 RRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSV---RVHRC-----------RRL 563
+ + LP S+ RRP A +RP PA V RV C RRL
Sbjct: 114 QTREGKMGLPDSA----RRP--RAPRTPLRPERPAPGVPGGRVAPCTCTSGSPSPRPRRL 167
Query: 564 EVGGHGSP 571
V G GSP
Sbjct: 168 RVSGRGSP 175
>gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]
Length = 371
Score = 37.0 bits (84), Expect = 0.052
Identities = 41/128 (32%), Positives = 48/128 (37%), Gaps = 26/128 (20%)
Query: 463 PRPRPTRGDP-----PPSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRR 517
P P RGDP PP+P+ AR + A R R R L G R
Sbjct: 55 PAGEPRRGDPGVAPSPPAPEDS-DARGEDGAAAERRPEPRTRDLSGARGQTTGGEGREGA 113
Query: 518 RRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSV---RVHRC-----------RRL 563
+ + LP S+ RRP A +RP PA V RV C RRL
Sbjct: 114 QTREGKMGLPDSA----RRP--RAPRTPLRPERPAPGVPGGRVAPCTCTSGSPSPRPRRL 167
Query: 564 EVGGHGSP 571
V G GSP
Sbjct: 168 RVSGRGSP 175
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 37.0 bits (84), Expect = 0.052
Identities = 57/209 (27%), Positives = 73/209 (34%), Gaps = 50/209 (23%)
Query: 388 TPVSVLGRTSHYLRPQKCKHPPVFQCA-VNPGIRAVPAMDTALLPPLVFFASLSPAAGIR 446
TP S +TS +P K PPV Q A PG A P P R
Sbjct: 1871 TPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPV----------------PKTPAR 1914
Query: 447 LGCSPSHLLGRDHLSRP-RPRPTRGDPPP----SPDTGFSARA-CERVPARRPAR----- 495
+ H R + P RP R PPP P+ G RA E P R R
Sbjct: 1915 TLLAKQHKTQRSPVRIPFMQRPARRGPPPLARAVPEPGPRGRAGTEAGPGARGGRLGLVR 1974
Query: 496 ----------RRERALCGRCCSVV---VAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAW 542
+R+ R + + +RRRR SS+ + + GA+ RR
Sbjct: 1975 VASALSSGSESSDRSGFRRQLTFIKESPGLRRRRSELSSAESAASAPQGASPRRG----- 2029
Query: 543 EVSVRPSLPAVSVRVHRCRRLEVGGHGSP 571
RP+LPAV + RC L P
Sbjct: 2030 ----RPALPAVFLCSSRCEELRAAPRQGP 2054
>gi|239750652 PREDICTED: hypothetical protein XP_002347499 [Homo
sapiens]
Length = 166
Score = 35.8 bits (81), Expect = 0.12
Identities = 37/121 (30%), Positives = 44/121 (36%), Gaps = 20/121 (16%)
Query: 467 PTRGDPP--PSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRT 524
P PP P+ G SA P + A + R RCCSVV A R RSS+R
Sbjct: 20 PAESAPPLQSHPENGVSA------PGKGTAAKGARGGQSRCCSVVAARLLRLTPRSSARR 73
Query: 525 RLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVHRCRRLEVGGHGSPGANGADMGLVERR 584
P S A QG LPA+S R G GA + G R
Sbjct: 74 GRPESEPATNGTRQQG--------DLPALSAAAEAPRE----GGKEEGAGAREAGAARGR 121
Query: 585 S 585
+
Sbjct: 122 A 122
>gi|239744960 PREDICTED: hypothetical protein XP_002343317 [Homo
sapiens]
Length = 166
Score = 35.8 bits (81), Expect = 0.12
Identities = 37/121 (30%), Positives = 44/121 (36%), Gaps = 20/121 (16%)
Query: 467 PTRGDPP--PSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRT 524
P PP P+ G SA P + A + R RCCSVV A R RSS+R
Sbjct: 20 PAESAPPLQSHPENGVSA------PGKGTAAKGARGGQSRCCSVVAARLLRLTPRSSARR 73
Query: 525 RLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVHRCRRLEVGGHGSPGANGADMGLVERR 584
P S A QG LPA+S R G GA + G R
Sbjct: 74 GRPESEPATNGTRQQG--------DLPALSAAAEAPRE----GGKEEGAGAREAGAARGR 121
Query: 585 S 585
+
Sbjct: 122 A 122
>gi|110624765 POU domain, class 3, transcription factor 1 [Homo
sapiens]
Length = 451
Score = 35.8 bits (81), Expect = 0.12
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 8 LALSNQLRRLWPCSRR-------PVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPP 58
L L ++ R+W C+RR P + P+ +APG G G S PPPP
Sbjct: 376 LQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVYAPGELGPGGGGASPPSAPPPP 433
>gi|21735550 mitogen-activated protein kinase kinase kinase 10 [Homo
sapiens]
Length = 954
Score = 35.4 bits (80), Expect = 0.15
Identities = 68/268 (25%), Positives = 95/268 (35%), Gaps = 44/268 (16%)
Query: 236 PPEQLCKALCSTKKDPRTWGAEGSTERVGATGVHRQLEEDADGKLPFVTPGACLGPEDHQ 295
PP++ + L KK RTWG + ++ G R L+ +G + + LG
Sbjct: 543 PPKK--EELVGGKKKGRTWGPSSTLQKERVGGEER-LKGLGEGSKQWSSSAPNLGKSPKH 599
Query: 296 IPKASGASEAEERQ--------GQWLPVSRDLAATTEAYLLVP-------------QPTG 334
P A G + E + G +P S +T +YL VP +PT
Sbjct: 600 TPIAPGFASLNEMEEFAEAEDGGSSVPPS---PYSTPSYLSVPLPAEPSPGARAPWEPTP 656
Query: 335 GHTPGLWALPRT----LLLHGTCGQKNGYHLDHGVSRSRAALPGEERAPRKYLLGNNTPV 390
P W L L G L V+ +RAA GEE+ R++L G P
Sbjct: 657 SAPPARWGHGARRRCDLALLGCATLLGAVGLGADVAEARAA-DGEEQ--RRWLDGLFFPR 713
Query: 391 SVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCS 450
+ GR L P H + V PG+ P+ LV +S+S R
Sbjct: 714 A--GRFPRGLSPPARPHGR--REDVGPGLGLAPSAT------LVSLSSVSDCNSTRSLLR 763
Query: 451 PSHLLGRDHLSRPRPRPTRGDPPPSPDT 478
P P P P PSP T
Sbjct: 764 SDSDEAAPAAPSPPPSPPAPTPTPSPST 791
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 35.0 bits (79), Expect = 0.20
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 19 PCSRRPVP--SSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQ 71
P R+P+ S S+LP+L + +PG Q ++P + +PPPPQ P G+P +Q
Sbjct: 416 PLGRQPMAQVSQSSLPMLSSPSPGQQVQTP-----QSMPPPPQ-PSPQPGQPSSQ 464
>gi|48526509 translocase of inner mitochondrial membrane 50 homolog
[Homo sapiens]
Length = 456
Score = 35.0 bits (79), Expect = 0.20
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 48 GISTEPVPPP-PQCP-GCDCGEPIAQRLEEGDEAFRQSEYQKAAGLFRSTLARLAQPDRG 105
G+S V PP P+ GC G A+R G A+RQ + +A +F + L RG
Sbjct: 65 GLSRASVHPPLPRVSIGCSSGPGRAKRERVGGAAWRQRKMAASAAVFSRLRSGLRLGSRG 124
Query: 106 QCLRLGNALARADRLPVALGA 126
C RL RA +G+
Sbjct: 125 LCTRLATPPRRAPDQAAEIGS 145
>gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 34.7 bits (78), Expect = 0.26
Identities = 35/102 (34%), Positives = 39/102 (38%), Gaps = 4/102 (3%)
Query: 24 PVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQRLEEGDEAFRQS 83
P P+ S PL A PG R P G + P PP P +P A R E QS
Sbjct: 92 PRPTRSPAPL--ARRPGKPPRRPKGAAGHPSAPPAAAPAAP-AQPPAPRPESQLSDRPQS 148
Query: 84 EYQKAAGLFRST-LARLAQPDRGQCLRLGNALARADRLPVAL 124
QK G RS A A P G + A R R AL
Sbjct: 149 WEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAAL 190
>gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 34.7 bits (78), Expect = 0.26
Identities = 35/102 (34%), Positives = 39/102 (38%), Gaps = 4/102 (3%)
Query: 24 PVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQRLEEGDEAFRQS 83
P P+ S PL A PG R P G + P PP P +P A R E QS
Sbjct: 92 PRPTRSPAPL--ARRPGKPPRRPKGAAGHPSAPPAAAPAAP-AQPPAPRPESQLSDRPQS 148
Query: 84 EYQKAAGLFRST-LARLAQPDRGQCLRLGNALARADRLPVAL 124
QK G RS A A P G + A R R AL
Sbjct: 149 WEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAAL 190
>gi|87298836 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Homo
sapiens]
Length = 315
Score = 34.7 bits (78), Expect = 0.26
Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 18/112 (16%)
Query: 439 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPT-----------RGDPPPSPDTGFSARACER 487
L+PA R S G +H R P+ T R + P S A A ER
Sbjct: 199 LAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSASQA-KASAPER 257
Query: 488 VPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQ 539
P+ P R++ C RC + + + + LP G L PW+
Sbjct: 258 TPSPAPKRKKRAKSCSRCLHTALHI------AEAPGSLLPGGKGRCLSSPWK 303
>gi|23200002 NOL1/NOP2/Sun domain family, member 5C isoform 2 [Homo
sapiens]
Length = 291
Score = 34.7 bits (78), Expect = 0.26
Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 18/112 (16%)
Query: 439 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPT-----------RGDPPPSPDTGFSARACER 487
L+PA R S G +H R P+ T R + P S A A ER
Sbjct: 175 LAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSASQA-KASAPER 233
Query: 488 VPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQ 539
P+ P R++ C RC + + + + LP G L PW+
Sbjct: 234 TPSPAPKRKKRAKSCSRCLHTALHI------AEAPGSLLPGGKGRCLSSPWK 279
>gi|23200000 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Homo
sapiens]
Length = 315
Score = 34.7 bits (78), Expect = 0.26
Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 18/112 (16%)
Query: 439 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPT-----------RGDPPPSPDTGFSARACER 487
L+PA R S G +H R P+ T R + P S A A ER
Sbjct: 199 LAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSASQA-KASAPER 257
Query: 488 VPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQ 539
P+ P R++ C RC + + + + LP G L PW+
Sbjct: 258 TPSPAPKRKKRAKSCSRCLHTALHI------AEAPGSLLPGGKGRCLSSPWK 303
>gi|14589876 embryonal Fyn-associated substrate isoform 2 [Homo
sapiens]
Length = 468
Score = 34.3 bits (77), Expect = 0.34
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 13/92 (14%)
Query: 4 QGPPLALSNQLRRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAG----ISTEPV-PPPP 58
+ PP +L SRRP+P ALP+ A +P P G I P+ PPPP
Sbjct: 193 RSPPPPHRPRLPSAESLSRRPLP---ALPVPEAPSPSPVPSPAPGRKGSIQDRPLPPPPP 249
Query: 59 QCPGCDC----GEPIAQRLEEGDEAFRQSEYQ 86
+ PG G+P + +E+ D A +EY+
Sbjct: 250 RLPGYGGPKVEGDPEGREMED-DPAGHHNEYE 280
>gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo
sapiens]
Length = 561
Score = 34.3 bits (77), Expect = 0.34
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 13/92 (14%)
Query: 4 QGPPLALSNQLRRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAG----ISTEPV-PPPP 58
+ PP +L SRRP+P ALP+ A +P P G I P+ PPPP
Sbjct: 286 RSPPPPHRPRLPSAESLSRRPLP---ALPVPEAPSPSPVPSPAPGRKGSIQDRPLPPPPP 342
Query: 59 QCPGCDC----GEPIAQRLEEGDEAFRQSEYQ 86
+ PG G+P + +E+ D A +EY+
Sbjct: 343 RLPGYGGPKVEGDPEGREMED-DPAGHHNEYE 373
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,908,039
Number of Sequences: 37866
Number of extensions: 1752449
Number of successful extensions: 8741
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 169
Number of HSP's that attempted gapping in prelim test: 8456
Number of HSP's gapped (non-prelim): 451
length of query: 598
length of database: 18,247,518
effective HSP length: 108
effective length of query: 490
effective length of database: 14,157,990
effective search space: 6937415100
effective search space used: 6937415100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.