BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo sapiens] (598 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo ... 1227 0.0 gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo ... 1199 0.0 gi|239757014 PREDICTED: hypothetical protein [Homo sapiens] 528 e-150 gi|148528975 LON peptidase N-terminal domain and ring finger 2 [... 218 1e-56 gi|73747840 LON peptidase N-terminal domain and ring finger 3 is... 43 7e-04 gi|37622896 LON peptidase N-terminal domain and ring finger 3 is... 43 7e-04 gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 37 0.040 gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo ... 37 0.040 gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo ... 37 0.040 gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo ... 37 0.040 gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo ... 37 0.040 gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo s... 37 0.040 gi|239756899 PREDICTED: hypothetical protein [Homo sapiens] 37 0.052 gi|169204628 PREDICTED: similar to hCG2045644 [Homo sapiens] 37 0.052 gi|113427491 PREDICTED: hypothetical protein [Homo sapiens] 37 0.052 gi|239745902 PREDICTED: hypothetical protein [Homo sapiens] 37 0.052 gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 37 0.052 gi|239750652 PREDICTED: hypothetical protein XP_002347499 [Homo ... 36 0.12 gi|239744960 PREDICTED: hypothetical protein XP_002343317 [Homo ... 36 0.12 gi|110624765 POU domain, class 3, transcription factor 1 [Homo s... 36 0.12 gi|21735550 mitogen-activated protein kinase kinase kinase 10 [H... 35 0.15 gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 35 0.20 gi|48526509 translocase of inner mitochondrial membrane 50 homol... 35 0.20 gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ... 35 0.26 gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo ... 35 0.26 gi|87298836 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Ho... 35 0.26 gi|23200002 NOL1/NOP2/Sun domain family, member 5C isoform 2 [Ho... 35 0.26 gi|23200000 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Ho... 35 0.26 gi|14589876 embryonal Fyn-associated substrate isoform 2 [Homo s... 34 0.34 gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo sa... 34 0.34 >gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo sapiens] Length = 598 Score = 1227 bits (3175), Expect = 0.0 Identities = 598/598 (100%), Positives = 598/598 (100%) Query: 1 MSHQGPPLALSNQLRRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQC 60 MSHQGPPLALSNQLRRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQC Sbjct: 1 MSHQGPPLALSNQLRRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQC 60 Query: 61 PGCDCGEPIAQRLEEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQCLRLGNALARADRL 120 PGCDCGEPIAQRLEEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQCLRLGNALARADRL Sbjct: 61 PGCDCGEPIAQRLEEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQCLRLGNALARADRL 120 Query: 121 PVALGAFCVALRLEALRPEELGELAELAGGLVCPGLRERPLFTGKPGGELEAPALRGAGA 180 PVALGAFCVALRLEALRPEELGELAELAGGLVCPGLRERPLFTGKPGGELEAPALRGAGA Sbjct: 121 PVALGAFCVALRLEALRPEELGELAELAGGLVCPGLRERPLFTGKPGGELEAPALRGAGA 180 Query: 181 ERPQALRVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLRMLISFPRPPEQL 240 ERPQALRVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLRMLISFPRPPEQL Sbjct: 181 ERPQALRVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLRMLISFPRPPEQL 240 Query: 241 CKALCSTKKDPRTWGAEGSTERVGATGVHRQLEEDADGKLPFVTPGACLGPEDHQIPKAS 300 CKALCSTKKDPRTWGAEGSTERVGATGVHRQLEEDADGKLPFVTPGACLGPEDHQIPKAS Sbjct: 241 CKALCSTKKDPRTWGAEGSTERVGATGVHRQLEEDADGKLPFVTPGACLGPEDHQIPKAS 300 Query: 301 GASEAEERQGQWLPVSRDLAATTEAYLLVPQPTGGHTPGLWALPRTLLLHGTCGQKNGYH 360 GASEAEERQGQWLPVSRDLAATTEAYLLVPQPTGGHTPGLWALPRTLLLHGTCGQKNGYH Sbjct: 301 GASEAEERQGQWLPVSRDLAATTEAYLLVPQPTGGHTPGLWALPRTLLLHGTCGQKNGYH 360 Query: 361 LDHGVSRSRAALPGEERAPRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIR 420 LDHGVSRSRAALPGEERAPRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIR Sbjct: 361 LDHGVSRSRAALPGEERAPRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIR 420 Query: 421 AVPAMDTALLPPLVFFASLSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGF 480 AVPAMDTALLPPLVFFASLSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGF Sbjct: 421 AVPAMDTALLPPLVFFASLSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGF 480 Query: 481 SARACERVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQG 540 SARACERVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQG Sbjct: 481 SARACERVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQG 540 Query: 541 AWEVSVRPSLPAVSVRVHRCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW 598 AWEVSVRPSLPAVSVRVHRCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW Sbjct: 541 AWEVSVRPSLPAVSVRVHRCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW 598 >gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo sapiens] Length = 616 Score = 1199 bits (3103), Expect = 0.0 Identities = 584/585 (99%), Positives = 585/585 (100%) Query: 14 LRRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQRL 73 +RRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQRL Sbjct: 32 VRRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQRL 91 Query: 74 EEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQCLRLGNALARADRLPVALGAFCVALRL 133 EEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQCLRLGNALARADRLPVALGAFCVALRL Sbjct: 92 EEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQCLRLGNALARADRLPVALGAFCVALRL 151 Query: 134 EALRPEELGELAELAGGLVCPGLRERPLFTGKPGGELEAPALRGAGAERPQALRVNVVLS 193 EALRPEELGELAELAGGLVCPGLRERPLFTGKPGGELEAPALRGAGAERPQALRVNVVLS Sbjct: 152 EALRPEELGELAELAGGLVCPGLRERPLFTGKPGGELEAPALRGAGAERPQALRVNVVLS 211 Query: 194 RKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLRMLISFPRPPEQLCKALCSTKKDPRT 253 RKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLRMLISFPRPPEQLCKALCSTKKDPRT Sbjct: 212 RKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLRMLISFPRPPEQLCKALCSTKKDPRT 271 Query: 254 WGAEGSTERVGATGVHRQLEEDADGKLPFVTPGACLGPEDHQIPKASGASEAEERQGQWL 313 WGAEGSTERVGATGVHRQLEEDADGKLPFVTPGACLGPEDHQIPKASGASEAEERQGQWL Sbjct: 272 WGAEGSTERVGATGVHRQLEEDADGKLPFVTPGACLGPEDHQIPKASGASEAEERQGQWL 331 Query: 314 PVSRDLAATTEAYLLVPQPTGGHTPGLWALPRTLLLHGTCGQKNGYHLDHGVSRSRAALP 373 PVSRDLAATTEAYLLVPQPTGGHTPGLWALPRTLLLHGTCGQKNGYHLDHGVSRSRAALP Sbjct: 332 PVSRDLAATTEAYLLVPQPTGGHTPGLWALPRTLLLHGTCGQKNGYHLDHGVSRSRAALP 391 Query: 374 GEERAPRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPL 433 GEERAPRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPL Sbjct: 392 GEERAPRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPL 451 Query: 434 VFFASLSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRP 493 VFFASLSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRP Sbjct: 452 VFFASLSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRP 511 Query: 494 ARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAV 553 ARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAV Sbjct: 512 ARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAV 571 Query: 554 SVRVHRCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW 598 SVRVHRCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW Sbjct: 572 SVRVHRCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW 616 >gi|239757014 PREDICTED: hypothetical protein [Homo sapiens] Length = 281 Score = 528 bits (1360), Expect = e-150 Identities = 258/280 (92%), Positives = 262/280 (93%) Query: 319 LAATTEAYLLVPQPTGGHTPGLWALPRTLLLHGTCGQKNGYHLDHGVSRSRAALPGEERA 378 L+AT ++ + GG G LLLHGTCGQKNGYHLDHGVSRSRAALPGEERA Sbjct: 2 LSATIQSSPCIRSSDGGSQQGWMPESHRLLLHGTCGQKNGYHLDHGVSRSRAALPGEERA 61 Query: 379 PRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFAS 438 PRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFAS Sbjct: 62 PRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFAS 121 Query: 439 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRPARRRE 498 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRPARRRE Sbjct: 122 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRPARRRE 181 Query: 499 RALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVH 558 RALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVH Sbjct: 182 RALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVH 241 Query: 559 RCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW 598 RCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW Sbjct: 242 RCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW 281 >gi|148528975 LON peptidase N-terminal domain and ring finger 2 [Homo sapiens] Length = 754 Score = 218 bits (556), Expect = 1e-56 Identities = 133/222 (59%), Positives = 140/222 (63%), Gaps = 45/222 (20%) Query: 49 ISTEPVPPPP--QCPGCDCGEPIAQRLEEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQ 106 +S EPVPPPP QCPGCD EPIAQRLEEGDEAFR +Y+ AA LFRS LA LAQPDRG Sbjct: 1 MSPEPVPPPPPPQCPGCDRAEPIAQRLEEGDEAFRAGDYEMAAELFRSMLAGLAQPDRGL 60 Query: 107 CLRLGNALARADRLPVALGAFCVALRLEALRPEELGELAELAGGLV-CPGLRERPLFTGK 165 CLRLG+ALARA RLP ALGAF A RL ALRPE EL ELAGGLV GLR+RPL Sbjct: 61 CLRLGDALARAGRLPEALGAFRGAARLGALRPE---ELEELAGGLVRAVGLRDRPLSAEN 117 Query: 166 PGGELEAPALRG---------------------------------------AGAERPQAL 186 PGGE EAP G G RPQ Sbjct: 118 PGGEPEAPGEGGPAPEPRAPRDLLGCPRCRRLLHKPVTLPCGLTVCKRCVEPGPARPQVR 177 Query: 187 RVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLR 228 RVNVVLS LE+CFPA+C L RL GQARSLQRQQQPEAALLR Sbjct: 178 RVNVVLSGLLEKCFPAECRLRRLAGQARSLQRQQQPEAALLR 219 >gi|73747840 LON peptidase N-terminal domain and ring finger 3 isoform 1 [Homo sapiens] Length = 759 Score = 43.1 bits (100), Expect = 7e-04 Identities = 25/57 (43%), Positives = 32/57 (56%) Query: 172 APALRGAGAERPQALRVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLR 228 A R AG + P LRVNVVLS L + FP +L + L R++Q EAALL+ Sbjct: 209 ARGARRAGQQPPPPLRVNVVLSGLLGKLFPGPARASQLRHEGNRLYRERQVEAALLK 265 >gi|37622896 LON peptidase N-terminal domain and ring finger 3 isoform 2 [Homo sapiens] Length = 718 Score = 43.1 bits (100), Expect = 7e-04 Identities = 25/57 (43%), Positives = 32/57 (56%) Query: 172 APALRGAGAERPQALRVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLR 228 A R AG + P LRVNVVLS L + FP +L + L R++Q EAALL+ Sbjct: 209 ARGARRAGQQPPPPLRVNVVLSGLLGKLFPGPARASQLRHEGNRLYRERQVEAALLK 265 >gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] Length = 350 Score = 37.4 bits (85), Expect = 0.040 Identities = 37/135 (27%), Positives = 49/135 (36%), Gaps = 19/135 (14%) Query: 407 HPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAA----GIRLGCSPSH------LLG 456 HPP + AV+ +RA PA LLP ++ A A +R + +H G Sbjct: 58 HPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTG 117 Query: 457 RDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRR 516 R RP P P P T + E P R P R RA C R Sbjct: 118 RRWRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGC---------R 168 Query: 517 RRRSSSRTRLPSSSG 531 +R+R P +G Sbjct: 169 SSPFPARSRTPGEAG 183 >gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo sapiens] Length = 240 Score = 37.4 bits (85), Expect = 0.040 Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 10/84 (11%) Query: 391 SVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCS 450 S+ G + Y + PPV + PGI A P + PP+ L PA G +G Sbjct: 160 SIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPP---PGMRPPMGPPIGLPPARGTPIGMP 216 Query: 451 PSHLLGRDHLSRPRPRPTRGDPPP 474 P + RP P RG PPP Sbjct: 217 PPGM-------RPPPPGIRGPPPP 233 >gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo sapiens] Length = 240 Score = 37.4 bits (85), Expect = 0.040 Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 10/84 (11%) Query: 391 SVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCS 450 S+ G + Y + PPV + PGI A P + PP+ L PA G +G Sbjct: 160 SIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPP---PGMRPPMGPPIGLPPARGTPIGMP 216 Query: 451 PSHLLGRDHLSRPRPRPTRGDPPP 474 P + RP P RG PPP Sbjct: 217 PPGM-------RPPPPGIRGPPPP 233 >gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo sapiens] Length = 240 Score = 37.4 bits (85), Expect = 0.040 Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 10/84 (11%) Query: 391 SVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCS 450 S+ G + Y + PPV + PGI A P + PP+ L PA G +G Sbjct: 160 SIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPP---PGMRPPMGPPIGLPPARGTPIGMP 216 Query: 451 PSHLLGRDHLSRPRPRPTRGDPPP 474 P + RP P RG PPP Sbjct: 217 PPGM-------RPPPPGIRGPPPP 233 >gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo sapiens] Length = 240 Score = 37.4 bits (85), Expect = 0.040 Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 10/84 (11%) Query: 391 SVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCS 450 S+ G + Y + PPV + PGI A P + PP+ L PA G +G Sbjct: 160 SIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPP---PGMRPPMGPPIGLPPARGTPIGMP 216 Query: 451 PSHLLGRDHLSRPRPRPTRGDPPP 474 P + RP P RG PPP Sbjct: 217 PPGM-------RPPPPGIRGPPPP 233 >gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo sapiens] Length = 240 Score = 37.4 bits (85), Expect = 0.040 Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 10/84 (11%) Query: 391 SVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCS 450 S+ G + Y + PPV + PGI A P + PP+ L PA G +G Sbjct: 160 SIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPP---PGMRPPMGPPIGLPPARGTPIGMP 216 Query: 451 PSHLLGRDHLSRPRPRPTRGDPPP 474 P + RP P RG PPP Sbjct: 217 PPGM-------RPPPPGIRGPPPP 233 >gi|239756899 PREDICTED: hypothetical protein [Homo sapiens] Length = 371 Score = 37.0 bits (84), Expect = 0.052 Identities = 41/128 (32%), Positives = 48/128 (37%), Gaps = 26/128 (20%) Query: 463 PRPRPTRGDP-----PPSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRR 517 P P RGDP PP+P+ AR + A R R R L G R Sbjct: 55 PAGEPRRGDPGVAPSPPAPEDS-DARGEDGAAAERRPEPRTRDLSGARGQTTGGEGREGA 113 Query: 518 RRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSV---RVHRC-----------RRL 563 + + LP S+ RRP A +RP PA V RV C RRL Sbjct: 114 QTREGKMGLPDSA----RRP--RAPRTPLRPERPAPGVPGGRVAPCTCTSGSPSPRPRRL 167 Query: 564 EVGGHGSP 571 V G GSP Sbjct: 168 RVSGRGSP 175 >gi|169204628 PREDICTED: similar to hCG2045644 [Homo sapiens] Length = 363 Score = 37.0 bits (84), Expect = 0.052 Identities = 46/202 (22%), Positives = 74/202 (36%), Gaps = 43/202 (21%) Query: 15 RRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQRLE 74 RR S+ P+P++ P P P GR+ ++ PVP P C P+ + Sbjct: 129 RRHVTSSQPPLPATQIRPR----NPCPAGRAGGHVAGAPVPAAPWCMYLWRSSPLGSLIT 184 Query: 75 EGDEAFRQSEYQKAAGLFRSTLARLAQPD----------RGQCLRLGNALARADRLPVAL 124 ++ FR + ++ +++ L P RGQC G + A A Sbjct: 185 GNNQRFRDHPGEN-RNIYIASIPPLGVPQDMPSPGLAGRRGQCASPGTSRAAA------- 236 Query: 125 GAFCVALRLEALRPEELGELAELAGGLVCPGLRERPLFTGKPGGELEAPALRGAGAERPQ 184 A R A ++A AG + L P TG R + Sbjct: 237 -----AGRARARTGSPSSDVAAAAGRITLLALCWYPFETGL----------------RRE 275 Query: 185 ALRVNVVLSRKLERCFPAKCPL 206 AL V V++ ++ CF ++ PL Sbjct: 276 ALEVPAVVNERIASCFFSRQPL 297 >gi|113427491 PREDICTED: hypothetical protein [Homo sapiens] Length = 371 Score = 37.0 bits (84), Expect = 0.052 Identities = 41/128 (32%), Positives = 48/128 (37%), Gaps = 26/128 (20%) Query: 463 PRPRPTRGDP-----PPSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRR 517 P P RGDP PP+P+ AR + A R R R L G R Sbjct: 55 PAGEPRRGDPGVAPSPPAPEDS-DARGEDGAAAERRPEPRTRDLSGARGQTTGGEGREGA 113 Query: 518 RRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSV---RVHRC-----------RRL 563 + + LP S+ RRP A +RP PA V RV C RRL Sbjct: 114 QTREGKMGLPDSA----RRP--RAPRTPLRPERPAPGVPGGRVAPCTCTSGSPSPRPRRL 167 Query: 564 EVGGHGSP 571 V G GSP Sbjct: 168 RVSGRGSP 175 >gi|239745902 PREDICTED: hypothetical protein [Homo sapiens] Length = 371 Score = 37.0 bits (84), Expect = 0.052 Identities = 41/128 (32%), Positives = 48/128 (37%), Gaps = 26/128 (20%) Query: 463 PRPRPTRGDP-----PPSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRR 517 P P RGDP PP+P+ AR + A R R R L G R Sbjct: 55 PAGEPRRGDPGVAPSPPAPEDS-DARGEDGAAAERRPEPRTRDLSGARGQTTGGEGREGA 113 Query: 518 RRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSV---RVHRC-----------RRL 563 + + LP S+ RRP A +RP PA V RV C RRL Sbjct: 114 QTREGKMGLPDSA----RRP--RAPRTPLRPERPAPGVPGGRVAPCTCTSGSPSPRPRRL 167 Query: 564 EVGGHGSP 571 V G GSP Sbjct: 168 RVSGRGSP 175 >gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] Length = 2303 Score = 37.0 bits (84), Expect = 0.052 Identities = 57/209 (27%), Positives = 73/209 (34%), Gaps = 50/209 (23%) Query: 388 TPVSVLGRTSHYLRPQKCKHPPVFQCA-VNPGIRAVPAMDTALLPPLVFFASLSPAAGIR 446 TP S +TS +P K PPV Q A PG A P P R Sbjct: 1871 TPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPV----------------PKTPAR 1914 Query: 447 LGCSPSHLLGRDHLSRP-RPRPTRGDPPP----SPDTGFSARA-CERVPARRPAR----- 495 + H R + P RP R PPP P+ G RA E P R R Sbjct: 1915 TLLAKQHKTQRSPVRIPFMQRPARRGPPPLARAVPEPGPRGRAGTEAGPGARGGRLGLVR 1974 Query: 496 ----------RRERALCGRCCSVV---VAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAW 542 +R+ R + + +RRRR SS+ + + GA+ RR Sbjct: 1975 VASALSSGSESSDRSGFRRQLTFIKESPGLRRRRSELSSAESAASAPQGASPRRG----- 2029 Query: 543 EVSVRPSLPAVSVRVHRCRRLEVGGHGSP 571 RP+LPAV + RC L P Sbjct: 2030 ----RPALPAVFLCSSRCEELRAAPRQGP 2054 >gi|239750652 PREDICTED: hypothetical protein XP_002347499 [Homo sapiens] Length = 166 Score = 35.8 bits (81), Expect = 0.12 Identities = 37/121 (30%), Positives = 44/121 (36%), Gaps = 20/121 (16%) Query: 467 PTRGDPP--PSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRT 524 P PP P+ G SA P + A + R RCCSVV A R RSS+R Sbjct: 20 PAESAPPLQSHPENGVSA------PGKGTAAKGARGGQSRCCSVVAARLLRLTPRSSARR 73 Query: 525 RLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVHRCRRLEVGGHGSPGANGADMGLVERR 584 P S A QG LPA+S R G GA + G R Sbjct: 74 GRPESEPATNGTRQQG--------DLPALSAAAEAPRE----GGKEEGAGAREAGAARGR 121 Query: 585 S 585 + Sbjct: 122 A 122 >gi|239744960 PREDICTED: hypothetical protein XP_002343317 [Homo sapiens] Length = 166 Score = 35.8 bits (81), Expect = 0.12 Identities = 37/121 (30%), Positives = 44/121 (36%), Gaps = 20/121 (16%) Query: 467 PTRGDPP--PSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRT 524 P PP P+ G SA P + A + R RCCSVV A R RSS+R Sbjct: 20 PAESAPPLQSHPENGVSA------PGKGTAAKGARGGQSRCCSVVAARLLRLTPRSSARR 73 Query: 525 RLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVHRCRRLEVGGHGSPGANGADMGLVERR 584 P S A QG LPA+S R G GA + G R Sbjct: 74 GRPESEPATNGTRQQG--------DLPALSAAAEAPRE----GGKEEGAGAREAGAARGR 121 Query: 585 S 585 + Sbjct: 122 A 122 >gi|110624765 POU domain, class 3, transcription factor 1 [Homo sapiens] Length = 451 Score = 35.8 bits (81), Expect = 0.12 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 7/58 (12%) Query: 8 LALSNQLRRLWPCSRR-------PVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPP 58 L L ++ R+W C+RR P + P+ +APG G G S PPPP Sbjct: 376 LQLEKEVVRVWFCNRRQKEKRMTPAAGAGHPPMDDVYAPGELGPGGGGASPPSAPPPP 433 >gi|21735550 mitogen-activated protein kinase kinase kinase 10 [Homo sapiens] Length = 954 Score = 35.4 bits (80), Expect = 0.15 Identities = 68/268 (25%), Positives = 95/268 (35%), Gaps = 44/268 (16%) Query: 236 PPEQLCKALCSTKKDPRTWGAEGSTERVGATGVHRQLEEDADGKLPFVTPGACLGPEDHQ 295 PP++ + L KK RTWG + ++ G R L+ +G + + LG Sbjct: 543 PPKK--EELVGGKKKGRTWGPSSTLQKERVGGEER-LKGLGEGSKQWSSSAPNLGKSPKH 599 Query: 296 IPKASGASEAEERQ--------GQWLPVSRDLAATTEAYLLVP-------------QPTG 334 P A G + E + G +P S +T +YL VP +PT Sbjct: 600 TPIAPGFASLNEMEEFAEAEDGGSSVPPS---PYSTPSYLSVPLPAEPSPGARAPWEPTP 656 Query: 335 GHTPGLWALPRT----LLLHGTCGQKNGYHLDHGVSRSRAALPGEERAPRKYLLGNNTPV 390 P W L L G L V+ +RAA GEE+ R++L G P Sbjct: 657 SAPPARWGHGARRRCDLALLGCATLLGAVGLGADVAEARAA-DGEEQ--RRWLDGLFFPR 713 Query: 391 SVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCS 450 + GR L P H + V PG+ P+ LV +S+S R Sbjct: 714 A--GRFPRGLSPPARPHGR--REDVGPGLGLAPSAT------LVSLSSVSDCNSTRSLLR 763 Query: 451 PSHLLGRDHLSRPRPRPTRGDPPPSPDT 478 P P P P PSP T Sbjct: 764 SDSDEAAPAAPSPPPSPPAPTPTPSPST 791 >gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] Length = 788 Score = 35.0 bits (79), Expect = 0.20 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 8/55 (14%) Query: 19 PCSRRPVP--SSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQ 71 P R+P+ S S+LP+L + +PG Q ++P + +PPPPQ P G+P +Q Sbjct: 416 PLGRQPMAQVSQSSLPMLSSPSPGQQVQTP-----QSMPPPPQ-PSPQPGQPSSQ 464 >gi|48526509 translocase of inner mitochondrial membrane 50 homolog [Homo sapiens] Length = 456 Score = 35.0 bits (79), Expect = 0.20 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 2/81 (2%) Query: 48 GISTEPVPPP-PQCP-GCDCGEPIAQRLEEGDEAFRQSEYQKAAGLFRSTLARLAQPDRG 105 G+S V PP P+ GC G A+R G A+RQ + +A +F + L RG Sbjct: 65 GLSRASVHPPLPRVSIGCSSGPGRAKRERVGGAAWRQRKMAASAAVFSRLRSGLRLGSRG 124 Query: 106 QCLRLGNALARADRLPVALGA 126 C RL RA +G+ Sbjct: 125 LCTRLATPPRRAPDQAAEIGS 145 >gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo sapiens] Length = 202 Score = 34.7 bits (78), Expect = 0.26 Identities = 35/102 (34%), Positives = 39/102 (38%), Gaps = 4/102 (3%) Query: 24 PVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQRLEEGDEAFRQS 83 P P+ S PL A PG R P G + P PP P +P A R E QS Sbjct: 92 PRPTRSPAPL--ARRPGKPPRRPKGAAGHPSAPPAAAPAAP-AQPPAPRPESQLSDRPQS 148 Query: 84 EYQKAAGLFRST-LARLAQPDRGQCLRLGNALARADRLPVAL 124 QK G RS A A P G + A R R AL Sbjct: 149 WEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAAL 190 >gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo sapiens] Length = 202 Score = 34.7 bits (78), Expect = 0.26 Identities = 35/102 (34%), Positives = 39/102 (38%), Gaps = 4/102 (3%) Query: 24 PVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQRLEEGDEAFRQS 83 P P+ S PL A PG R P G + P PP P +P A R E QS Sbjct: 92 PRPTRSPAPL--ARRPGKPPRRPKGAAGHPSAPPAAAPAAP-AQPPAPRPESQLSDRPQS 148 Query: 84 EYQKAAGLFRST-LARLAQPDRGQCLRLGNALARADRLPVAL 124 QK G RS A A P G + A R R AL Sbjct: 149 WEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAAL 190 >gi|87298836 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Homo sapiens] Length = 315 Score = 34.7 bits (78), Expect = 0.26 Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 18/112 (16%) Query: 439 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPT-----------RGDPPPSPDTGFSARACER 487 L+PA R S G +H R P+ T R + P S A A ER Sbjct: 199 LAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSASQA-KASAPER 257 Query: 488 VPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQ 539 P+ P R++ C RC + + + + LP G L PW+ Sbjct: 258 TPSPAPKRKKRAKSCSRCLHTALHI------AEAPGSLLPGGKGRCLSSPWK 303 >gi|23200002 NOL1/NOP2/Sun domain family, member 5C isoform 2 [Homo sapiens] Length = 291 Score = 34.7 bits (78), Expect = 0.26 Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 18/112 (16%) Query: 439 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPT-----------RGDPPPSPDTGFSARACER 487 L+PA R S G +H R P+ T R + P S A A ER Sbjct: 175 LAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSASQA-KASAPER 233 Query: 488 VPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQ 539 P+ P R++ C RC + + + + LP G L PW+ Sbjct: 234 TPSPAPKRKKRAKSCSRCLHTALHI------AEAPGSLLPGGKGRCLSSPWK 279 >gi|23200000 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Homo sapiens] Length = 315 Score = 34.7 bits (78), Expect = 0.26 Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 18/112 (16%) Query: 439 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPT-----------RGDPPPSPDTGFSARACER 487 L+PA R S G +H R P+ T R + P S A A ER Sbjct: 199 LAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSASQA-KASAPER 257 Query: 488 VPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQ 539 P+ P R++ C RC + + + + LP G L PW+ Sbjct: 258 TPSPAPKRKKRAKSCSRCLHTALHI------AEAPGSLLPGGKGRCLSSPWK 303 >gi|14589876 embryonal Fyn-associated substrate isoform 2 [Homo sapiens] Length = 468 Score = 34.3 bits (77), Expect = 0.34 Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 13/92 (14%) Query: 4 QGPPLALSNQLRRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAG----ISTEPV-PPPP 58 + PP +L SRRP+P ALP+ A +P P G I P+ PPPP Sbjct: 193 RSPPPPHRPRLPSAESLSRRPLP---ALPVPEAPSPSPVPSPAPGRKGSIQDRPLPPPPP 249 Query: 59 QCPGCDC----GEPIAQRLEEGDEAFRQSEYQ 86 + PG G+P + +E+ D A +EY+ Sbjct: 250 RLPGYGGPKVEGDPEGREMED-DPAGHHNEYE 280 >gi|5031681 embryonal Fyn-associated substrate isoform 1 [Homo sapiens] Length = 561 Score = 34.3 bits (77), Expect = 0.34 Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 13/92 (14%) Query: 4 QGPPLALSNQLRRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAG----ISTEPV-PPPP 58 + PP +L SRRP+P ALP+ A +P P G I P+ PPPP Sbjct: 286 RSPPPPHRPRLPSAESLSRRPLP---ALPVPEAPSPSPVPSPAPGRKGSIQDRPLPPPPP 342 Query: 59 QCPGCDC----GEPIAQRLEEGDEAFRQSEYQ 86 + PG G+P + +E+ D A +EY+ Sbjct: 343 RLPGYGGPKVEGDPEGREMED-DPAGHHNEYE 373 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.137 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,908,039 Number of Sequences: 37866 Number of extensions: 1752449 Number of successful extensions: 8741 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 169 Number of HSP's that attempted gapping in prelim test: 8456 Number of HSP's gapped (non-prelim): 451 length of query: 598 length of database: 18,247,518 effective HSP length: 108 effective length of query: 490 effective length of database: 14,157,990 effective search space: 6937415100 effective search space used: 6937415100 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.