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Search of human proteins with 239747054
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747054 PREDICTED: hypothetical protein XP_002344264 [Homo
sapiens]
(155 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747054 PREDICTED: hypothetical protein XP_002344264 [Homo ... 337 2e-93
gi|239747058 PREDICTED: hypothetical protein XP_002344266 [Homo ... 283 4e-77
gi|239747072 PREDICTED: hypothetical protein XP_002344273 [Homo ... 272 1e-73
gi|239747070 PREDICTED: hypothetical protein XP_002344272 [Homo ... 272 1e-73
gi|239747052 PREDICTED: hypothetical protein XP_002344263 [Homo ... 272 1e-73
gi|239747042 PREDICTED: hypothetical protein XP_002344258 [Homo ... 272 1e-73
gi|239747062 PREDICTED: hypothetical protein XP_002344268 [Homo ... 269 8e-73
gi|239747066 PREDICTED: hypothetical protein XP_002344270 [Homo ... 69 2e-12
gi|239747068 PREDICTED: hypothetical protein XP_002344271 [Homo ... 67 6e-12
gi|239747056 PREDICTED: hypothetical protein XP_002344265 [Homo ... 67 6e-12
gi|239747048 PREDICTED: hypothetical protein XP_002344261 [Homo ... 67 6e-12
gi|239747044 PREDICTED: hypothetical protein XP_002344259 [Homo ... 67 6e-12
gi|239747038 PREDICTED: hypothetical protein XP_002344256 [Homo ... 67 6e-12
gi|239747060 PREDICTED: hypothetical protein XP_002344267 [Homo ... 66 1e-11
gi|239747046 PREDICTED: hypothetical protein XP_002344260 [Homo ... 66 1e-11
gi|239747064 PREDICTED: hypothetical protein XP_002344269 [Homo ... 65 2e-11
gi|239747050 PREDICTED: hypothetical protein XP_002344262 [Homo ... 65 2e-11
gi|239747040 PREDICTED: hypothetical protein XP_002344257 [Homo ... 65 2e-11
gi|4557493 cleavage stimulation factor subunit 2 [Homo sapiens] 46 1e-05
gi|14149675 cleavage stimulation factor, 3' pre-RNA, subunit 2, ... 41 5e-04
gi|30061565 La ribonucleoprotein domain family member 2 isoform ... 36 0.012
gi|30061569 La ribonucleoprotein domain family member 2 isoform ... 36 0.012
gi|30061567 La ribonucleoprotein domain family member 2 isoform ... 36 0.012
gi|64276808 ADAM metallopeptidase with thrombospondin type 1 mot... 32 0.29
gi|19923901 hypothetical protein LOC91523 [Homo sapiens] 31 0.37
gi|239749338 PREDICTED: hypothetical protein XP_002346998 [Homo ... 30 0.64
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 30 1.1
gi|14149793 glutamine rich 2 [Homo sapiens] 29 1.4
gi|109150419 missing oocyte, meiosis regulator, homolog [Homo sa... 29 1.9
gi|56549694 enabled homolog isoform a [Homo sapiens] 28 2.4
>gi|239747054 PREDICTED: hypothetical protein XP_002344264 [Homo
sapiens]
Length = 155
Score = 337 bits (864), Expect = 2e-93
Identities = 155/155 (100%), Positives = 155/155 (100%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 121 IECNGCKKMNPKSLTGKAGCRKELTPMEWNRMEWK 155
IECNGCKKMNPKSLTGKAGCRKELTPMEWNRMEWK
Sbjct: 121 IECNGCKKMNPKSLTGKAGCRKELTPMEWNRMEWK 155
>gi|239747058 PREDICTED: hypothetical protein XP_002344266 [Homo
sapiens]
Length = 167
Score = 283 bits (724), Expect = 4e-77
Identities = 137/166 (82%), Positives = 141/166 (84%), Gaps = 12/166 (7%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 121 IECNGCKKMNPKSLTGKAGCRK------------ELTPMEWNRMEW 154
IECNG +KM K + K K E+ +E NRMEW
Sbjct: 121 IECNGMQKMESKIIDWKGWVSKRNDSNGMESNGMEVNRIELNRMEW 166
Score = 43.1 bits (100), Expect = 9e-05
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 3 SNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGM-----ELNGMELNGMGTNGVK 57
SNG+ GM N + N +E NGM+ +MESK ++ G + NGME NGM N ++
Sbjct: 103 SNGIKMYGMECNETESNVIECNGMQ--KMESKIIDWKGWVSKRNDSNGMESNGMEVNRIE 160
Query: 58 LYAVEEN 64
L +E N
Sbjct: 161 LNRMEWN 167
Score = 34.7 bits (78), Expect = 0.034
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETN 39
MES + W G + N MESNGME +E RME N
Sbjct: 129 MESKIIDWKGWVSKRNDSNGMESNGMEVNRIELNRMEWN 167
>gi|239747072 PREDICTED: hypothetical protein XP_002344273 [Homo
sapiens]
Length = 134
Score = 272 bits (695), Expect = 1e-73
Identities = 126/128 (98%), Positives = 127/128 (99%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 121 IECNGCKK 128
IECNG +K
Sbjct: 121 IECNGMQK 128
Score = 38.9 bits (89), Expect = 0.002
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 10/60 (16%)
Query: 2 ESNGMVWNGMNTNVMQPNRME----------SNGMEYKEMESKRMETNGMELNGMELNGM 51
E NG+ WNG++ N + + M+ SNG++ ME E+N +E NGM+ NG+
Sbjct: 72 ERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGI 131
>gi|239747070 PREDICTED: hypothetical protein XP_002344272 [Homo
sapiens]
Length = 134
Score = 272 bits (695), Expect = 1e-73
Identities = 126/128 (98%), Positives = 127/128 (99%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 121 IECNGCKK 128
IECNG +K
Sbjct: 121 IECNGMQK 128
Score = 38.9 bits (89), Expect = 0.002
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 10/60 (16%)
Query: 2 ESNGMVWNGMNTNVMQPNRME----------SNGMEYKEMESKRMETNGMELNGMELNGM 51
E NG+ WNG++ N + + M+ SNG++ ME E+N +E NGM+ NG+
Sbjct: 72 ERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGI 131
>gi|239747052 PREDICTED: hypothetical protein XP_002344263 [Homo
sapiens]
Length = 134
Score = 272 bits (695), Expect = 1e-73
Identities = 126/128 (98%), Positives = 127/128 (99%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 121 IECNGCKK 128
IECNG +K
Sbjct: 121 IECNGMQK 128
Score = 38.9 bits (89), Expect = 0.002
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 10/60 (16%)
Query: 2 ESNGMVWNGMNTNVMQPNRME----------SNGMEYKEMESKRMETNGMELNGMELNGM 51
E NG+ WNG++ N + + M+ SNG++ ME E+N +E NGM+ NG+
Sbjct: 72 ERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGI 131
>gi|239747042 PREDICTED: hypothetical protein XP_002344258 [Homo
sapiens]
Length = 134
Score = 272 bits (695), Expect = 1e-73
Identities = 126/128 (98%), Positives = 127/128 (99%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
Query: 121 IECNGCKK 128
IECNG +K
Sbjct: 121 IECNGMQK 128
Score = 38.9 bits (89), Expect = 0.002
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 10/60 (16%)
Query: 2 ESNGMVWNGMNTNVMQPNRME----------SNGMEYKEMESKRMETNGMELNGMELNGM 51
E NG+ WNG++ N + + M+ SNG++ ME E+N +E NGM+ NG+
Sbjct: 72 ERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGMQKNGI 131
>gi|239747062 PREDICTED: hypothetical protein XP_002344268 [Homo
sapiens]
Length = 134
Score = 269 bits (687), Expect = 8e-73
Identities = 125/128 (97%), Positives = 126/128 (98%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA
Sbjct: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
VEENRMECKRKERNGLEWNGIHWNGRECSVMDR GIKWNATVSNGIKMYGMECNETESNV
Sbjct: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRSGIKWNATVSNGIKMYGMECNETESNV 120
Query: 121 IECNGCKK 128
IECNG +K
Sbjct: 121 IECNGMQK 128
Score = 40.4 bits (93), Expect = 6e-04
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 20/80 (25%)
Query: 2 ESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAV 61
E NG+ WNG++ N E + M+ +G++ N +NG+K+Y +
Sbjct: 72 ERNGLEWNGIHWN--------------------GRECSVMDRSGIKWNATVSNGIKMYGM 111
Query: 62 EENRMECKRKERNGLEWNGI 81
E N E E NG++ NGI
Sbjct: 112 ECNETESNVIECNGMQKNGI 131
>gi|239747066 PREDICTED: hypothetical protein XP_002344270 [Homo
sapiens]
Length = 97
Score = 68.6 bits (166), Expect = 2e-12
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKCNGIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC +G+ WNG+ G EC +M+R ++WN
Sbjct: 67 NGIEC-----SGMLWNGMECIGMECPLMERIRVEWN 97
Score = 65.5 bits (158), Expect = 2e-11
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIE 122
+ W+G +C+ GIKWN +G+ GMEC E ++E
Sbjct: 54 MSWDGIKCN-----GIKWNGIECSGMLWNGMECIGMECPLME 90
Score = 47.4 bits (111), Expect = 5e-06
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGCKKMNPKSLTG 136
+WN I WNG+E + +D G WN G++ + E NE E N +E NG K G
Sbjct: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIK-CNG 63
Query: 137 KAGCRKELTPMEWNRME 153
E + M WN ME
Sbjct: 64 IKWNGIECSGMLWNGME 80
Score = 38.9 bits (89), Expect = 0.002
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 25/79 (31%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E NG+ WNGM+ + ++ N ++ NG +E +GM NGME G
Sbjct: 44 LERNGLEWNGMSWDGIKCNGIKWNG----------IECSGMLWNGMECIG---------- 83
Query: 61 VEENRMECKRKERNGLEWN 79
MEC ER +EWN
Sbjct: 84 -----MECPLMERIRVEWN 97
>gi|239747068 PREDICTED: hypothetical protein XP_002344271 [Homo
sapiens]
Length = 97
Score = 67.0 bits (162), Expect = 6e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 65.9 bits (159), Expect = 1e-11
Identities = 47/134 (35%), Positives = 61/134 (45%), Gaps = 38/134 (28%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGCKKMNPKSLTGKAGC 140
+ W+ GIKW NGIK G+ECN N +EC G
Sbjct: 54 MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIG--------------- 83
Query: 141 RKELTPMEWNRMEW 154
E MEW R+EW
Sbjct: 84 -MECPLMEWIRVEW 96
Score = 37.4 bits (85), Expect = 0.005
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 25/79 (31%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E NG+ WNGM+ + ++ N ++ NG+E NGM NGME G
Sbjct: 44 LERNGLEWNGMSWDGIKWNGIKWNGIE----------CNGMLWNGMECIG---------- 83
Query: 61 VEENRMECKRKERNGLEWN 79
MEC E +EWN
Sbjct: 84 -----MECPLMEWIRVEWN 97
>gi|239747056 PREDICTED: hypothetical protein XP_002344265 [Homo
sapiens]
Length = 97
Score = 67.0 bits (162), Expect = 6e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 65.9 bits (159), Expect = 1e-11
Identities = 47/134 (35%), Positives = 61/134 (45%), Gaps = 38/134 (28%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGCKKMNPKSLTGKAGC 140
+ W+ GIKW NGIK G+ECN N +EC G
Sbjct: 54 MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIG--------------- 83
Query: 141 RKELTPMEWNRMEW 154
E MEW R+EW
Sbjct: 84 -MECPLMEWIRVEW 96
Score = 37.4 bits (85), Expect = 0.005
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 25/79 (31%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E NG+ WNGM+ + ++ N ++ NG+E NGM NGME G
Sbjct: 44 LERNGLEWNGMSWDGIKWNGIKWNGIE----------CNGMLWNGMECIG---------- 83
Query: 61 VEENRMECKRKERNGLEWN 79
MEC E +EWN
Sbjct: 84 -----MECPLMEWIRVEWN 97
>gi|239747048 PREDICTED: hypothetical protein XP_002344261 [Homo
sapiens]
Length = 97
Score = 67.0 bits (162), Expect = 6e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNGMSWDGIKWNGIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 65.9 bits (159), Expect = 1e-11
Identities = 47/134 (35%), Positives = 61/134 (45%), Gaps = 38/134 (28%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFDETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGCKKMNPKSLTGKAGC 140
+ W+ GIKW NGIK G+ECN N +EC G
Sbjct: 54 MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIG--------------- 83
Query: 141 RKELTPMEWNRMEW 154
E MEW R+EW
Sbjct: 84 -MECPLMEWIRVEW 96
Score = 38.1 bits (87), Expect = 0.003
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 30/84 (35%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E NG+ WNGM+ +G+++ NG++ NG+E NGM NG
Sbjct: 44 LERNGLEWNGMSW----------DGIKW----------NGIKWNGIECNGMLWNG----- 78
Query: 61 VEENRMECKRKERNGLEWNGIHWN 84
MEC E +EW + WN
Sbjct: 79 -----MECIGMECPLMEWIRVEWN 97
>gi|239747044 PREDICTED: hypothetical protein XP_002344259 [Homo
sapiens]
Length = 97
Score = 67.0 bits (162), Expect = 6e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 65.9 bits (159), Expect = 1e-11
Identities = 47/134 (35%), Positives = 61/134 (45%), Gaps = 38/134 (28%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGCKKMNPKSLTGKAGC 140
+ W+ GIKW NGIK G+ECN N +EC G
Sbjct: 54 MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIG--------------- 83
Query: 141 RKELTPMEWNRMEW 154
E MEW R+EW
Sbjct: 84 -MECPLMEWIRVEW 96
Score = 37.4 bits (85), Expect = 0.005
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 25/79 (31%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E NG+ WNGM+ + ++ N ++ NG+E NGM NGME G
Sbjct: 44 LERNGLEWNGMSWDGIKWNGIKWNGIE----------CNGMLWNGMECIG---------- 83
Query: 61 VEENRMECKRKERNGLEWN 79
MEC E +EWN
Sbjct: 84 -----MECPLMEWIRVEWN 97
>gi|239747038 PREDICTED: hypothetical protein XP_002344256 [Homo
sapiens]
Length = 97
Score = 67.0 bits (162), Expect = 6e-12
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 65.9 bits (159), Expect = 1e-11
Identities = 47/134 (35%), Positives = 61/134 (45%), Gaps = 38/134 (28%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGCKKMNPKSLTGKAGC 140
+ W+ GIKW NGIK G+ECN N +EC G
Sbjct: 54 MSWD----------GIKW-----NGIKWNGIECNGMLWNGMECIG--------------- 83
Query: 141 RKELTPMEWNRMEW 154
E MEW R+EW
Sbjct: 84 -MECPLMEWIRVEW 96
Score = 37.4 bits (85), Expect = 0.005
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 25/79 (31%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E NG+ WNGM+ + ++ N ++ NG+E NGM NGME G
Sbjct: 44 LERNGLEWNGMSWDGIKWNGIKWNGIE----------CNGMLWNGMECIG---------- 83
Query: 61 VEENRMECKRKERNGLEWN 79
MEC E +EWN
Sbjct: 84 -----MECPLMEWIRVEWN 97
>gi|239747060 PREDICTED: hypothetical protein XP_002344267 [Homo
sapiens]
Length = 97
Score = 66.2 bits (160), Expect = 1e-11
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 63.2 bits (152), Expect = 9e-11
Identities = 46/134 (34%), Positives = 60/134 (44%), Gaps = 38/134 (28%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGCKKMNPKSLTGKAGC 140
+ W+ GIKW N IK G+ECN N +EC G
Sbjct: 54 MSWD----------GIKW-----NDIKWNGIECNGMLWNGMECIG--------------- 83
Query: 141 RKELTPMEWNRMEW 154
E MEW R+EW
Sbjct: 84 -MECPLMEWIRVEW 96
Score = 37.7 bits (86), Expect = 0.004
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E + WN + N ++ N M +G+++ +++ +E NGM NGME G
Sbjct: 34 LEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIG---------- 83
Query: 61 VEENRMECKRKERNGLEWN 79
MEC E +EWN
Sbjct: 84 -----MECPLMEWIRVEWN 97
>gi|239747046 PREDICTED: hypothetical protein XP_002344260 [Homo
sapiens]
Length = 97
Score = 66.2 bits (160), Expect = 1e-11
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 63.2 bits (152), Expect = 9e-11
Identities = 46/134 (34%), Positives = 60/134 (44%), Gaps = 38/134 (28%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGCKKMNPKSLTGKAGC 140
+ W+ GIKW N IK G+ECN N +EC G
Sbjct: 54 MSWD----------GIKW-----NDIKWNGIECNGMLWNGMECIG--------------- 83
Query: 141 RKELTPMEWNRMEW 154
E MEW R+EW
Sbjct: 84 -MECPLMEWIRVEW 96
Score = 37.7 bits (86), Expect = 0.004
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E + WN + N ++ N M +G+++ +++ +E NGM NGME G
Sbjct: 34 LEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIG---------- 83
Query: 61 VEENRMECKRKERNGLEWN 79
MEC E +EWN
Sbjct: 84 -----MECPLMEWIRVEWN 97
>gi|239747064 PREDICTED: hypothetical protein XP_002344269 [Homo
sapiens]
Length = 97
Score = 65.5 bits (158), Expect = 2e-11
Identities = 47/134 (35%), Positives = 61/134 (45%), Gaps = 38/134 (28%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGCKKMNPKSLTGKAGC 140
+ W+G IKWN GIK G+ECN N +EC G
Sbjct: 54 MSWDG----------IKWN-----GIKWNGIECNGMLWNGMECIG--------------- 83
Query: 141 RKELTPMEWNRMEW 154
E MEW R+EW
Sbjct: 84 -MESPLMEWIRVEW 96
Score = 63.2 bits (152), Expect = 9e-11
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC NG+ WNG+ G E +M+ ++WN
Sbjct: 67 NGIEC-----NGMLWNGMECIGMESPLMEWIRVEWN 97
Score = 52.8 bits (125), Expect = 1e-07
Identities = 28/83 (33%), Positives = 44/83 (53%)
Query: 2 ESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAV 61
E NG+ G + N M +E + E+ E+E +E NGM +G++ NG+ NG++ +
Sbjct: 15 ELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNGIKWNGIECNGM 74
Query: 62 EENRMECKRKERNGLEWNGIHWN 84
N MEC E +EW + WN
Sbjct: 75 LWNGMECIGMESPLMEWIRVEWN 97
Score = 37.0 bits (84), Expect = 0.007
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 10/64 (15%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E NG+ WNGM+ + ++ N ++ NG+E NGM NGME GM + ++
Sbjct: 44 LERNGLEWNGMSWDGIKWNGIKWNGIE----------CNGMLWNGMECIGMESPLMEWIR 93
Query: 61 VEEN 64
VE N
Sbjct: 94 VEWN 97
>gi|239747050 PREDICTED: hypothetical protein XP_002344262 [Homo
sapiens]
Length = 97
Score = 65.5 bits (158), Expect = 2e-11
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECN 124
+ W+G + + + GI+ N + NG++ GMEC E +ECN
Sbjct: 54 MSWDGIKWNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVECN 97
Score = 61.2 bits (147), Expect = 3e-10
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMD 92
N +EC NG+ WNG+ G EC +M+
Sbjct: 67 NGIEC-----NGMLWNGMECIGMECPLME 90
Score = 47.8 bits (112), Expect = 4e-06
Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Query: 77 EWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGCK--------- 127
+WN I WNG+E + +D G WN G++ + E NE E N +E NG
Sbjct: 5 QWNQIKWNGKELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDI 64
Query: 128 KMNPKSLTGKAGCRKELTPMEWNRMEW 154
K N G E ME MEW
Sbjct: 65 KWNGIECNGMLWNGMECIGMECPLMEW 91
Score = 47.4 bits (111), Expect = 5e-06
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 20/97 (20%)
Query: 2 ESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAV 61
E NG+ G + N M +E + E+ E+E +E NGM +G++ N +
Sbjct: 15 ELNGVDGIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDI---------- 64
Query: 62 EENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKW 98
+ NG+E NG+ WNG EC M+ P ++W
Sbjct: 65 ----------KWNGIECNGMLWNGMECIGMECPLMEW 91
Score = 47.0 bits (110), Expect = 7e-06
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N M W G+ + + N +E NG+E+ M ++ N ++ NG+E NGM NG++ +E
Sbjct: 27 NEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIGMEC 86
Query: 64 NRMECKRKERN 74
ME R E N
Sbjct: 87 PLMEWIRVECN 97
Score = 36.2 bits (82), Expect = 0.012
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGM 51
+E + WN + N ++ N M +G+++ +++ +E NGM NGME GM
Sbjct: 34 LEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIGM 84
Score = 35.8 bits (81), Expect = 0.015
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELN 49
+E NGM W+G+ N ++ N +E NGM + ME ME ME +E N
Sbjct: 49 LEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIGMECPLMEWIRVECN 97
>gi|239747040 PREDICTED: hypothetical protein XP_002344257 [Homo
sapiens]
Length = 97
Score = 65.5 bits (158), Expect = 2e-11
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 4 NGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEE 63
N + WNG N + + N M +K +E E N +E NG+E NGM +G+K ++
Sbjct: 7 NQIKWNGKELNGVDWIGWDWNEMYWKGLEFHETEWNELERNGLEWNGMSWDGIKWNDIKW 66
Query: 64 NRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWN 99
N +EC NG+ WNG+ G EC +M+ ++WN
Sbjct: 67 NGIEC-----NGMLWNGMECIGMECPLMEWIRVEWN 97
Score = 63.9 bits (154), Expect = 5e-11
Identities = 46/134 (34%), Positives = 60/134 (44%), Gaps = 38/134 (28%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
MESN + +++ NG ELNG++ G N + +E + E ERNGLEWNG
Sbjct: 1 MESN-------QWNQIKWNGKELNGVDWIGWDWNEMYWKGLEFHETEWNELERNGLEWNG 53
Query: 81 IHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGCKKMNPKSLTGKAGC 140
+ W+ GIKW N IK G+ECN N +EC G
Sbjct: 54 MSWD----------GIKW-----NDIKWNGIECNGMLWNGMECIG--------------- 83
Query: 141 RKELTPMEWNRMEW 154
E MEW R+EW
Sbjct: 84 -MECPLMEWIRVEW 96
Score = 37.7 bits (86), Expect = 0.004
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E + WN + N ++ N M +G+++ +++ +E NGM NGME G
Sbjct: 34 LEFHETEWNELERNGLEWNGMSWDGIKWNDIKWNGIECNGMLWNGMECIG---------- 83
Query: 61 VEENRMECKRKERNGLEWN 79
MEC E +EWN
Sbjct: 84 -----MECPLMEWIRVEWN 97
>gi|4557493 cleavage stimulation factor subunit 2 [Homo sapiens]
Length = 577
Score = 46.2 bits (108), Expect = 1e-05
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNG 55
ME+ M G++ ++ ME+ ME + ME++ ME ME+ GME GM T G
Sbjct: 415 MEARAMEARGLDARGLEARAMEARAMEARAMEARAMEARAMEVRGMEARGMDTRG 469
Score = 41.6 bits (96), Expect = 3e-04
Identities = 18/63 (28%), Positives = 33/63 (52%)
Query: 18 PNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLE 77
P +++ GME + ME++ ++ G+E ME M ++ A+E ME + E G++
Sbjct: 407 PRGIDARGMEARAMEARGLDARGLEARAMEARAMEARAMEARAMEARAMEVRGMEARGMD 466
Query: 78 WNG 80
G
Sbjct: 467 TRG 469
Score = 40.4 bits (93), Expect = 6e-04
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 22 ESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNGI 81
+ G++ + ME++ ME G++ G+E M ++ A+E ME + E G+E G+
Sbjct: 406 DPRGIDARGMEARAMEARGLDARGLEARAMEARAMEARAMEARAMEARAMEVRGMEARGM 465
Query: 82 HWNG 85
G
Sbjct: 466 DTRG 469
Score = 37.7 bits (86), Expect = 0.004
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGV 56
+++ GM M + +E+ ME + ME++ ME ME ME+ GM G+
Sbjct: 410 IDARGMEARAMEARGLDARGLEARAMEARAMEARAMEARAMEARAMEVRGMEARGM 465
Score = 37.4 bits (85), Expect = 0.005
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 2 ESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVK 57
+ G+ GM M+ +++ G+E + ME++ ME ME ME M G++
Sbjct: 406 DPRGIDARGMEARAMEARGLDARGLEARAMEARAMEARAMEARAMEARAMEVRGME 461
Score = 27.7 bits (60), Expect = 4.1
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 41 MELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNA 100
++ G L+G G + ++ ME + E GL+ G+ E M+ ++ A
Sbjct: 392 LDQRGPPLDGRGGRDPR--GIDARGMEARAMEARGLDARGLEARAMEARAMEARAMEARA 449
Query: 101 TVSNGIKMYGME 112
+ +++ GME
Sbjct: 450 MEARAMEVRGME 461
Score = 26.9 bits (58), Expect = 7.0
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Query: 30 EMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNGIHWNGRECS 89
E ++ G L+G G G+ +E ME + + GLE + E
Sbjct: 386 EPRGPMLDQRGPPLDGR--GGRDPRGIDARGMEARAMEARGLDARGLEARAMEARAMEAR 443
Query: 90 VMDRPGIKWNATVSNGIKMYGME 112
M+ ++ A G++ GM+
Sbjct: 444 AMEARAMEARAMEVRGMEARGMD 466
>gi|14149675 cleavage stimulation factor, 3' pre-RNA, subunit 2,
64kDa, tau variant [Homo sapiens]
Length = 616
Score = 40.8 bits (94), Expect = 5e-04
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 2 ESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNG 50
+S M M T V++ ME GME ME++ ME GM+ G+E+ G
Sbjct: 414 DSRAMETRAMETEVLETRVMERRGMETCAMETRGMEARGMDARGLEMRG 462
Score = 39.3 bits (90), Expect = 0.001
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 10 GMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKL 58
G ++ M+ ME+ +E + ME + MET ME GME GM G+++
Sbjct: 412 GRDSRAMETRAMETEVLETRVMERRGMETCAMETRGMEARGMDARGLEM 460
Score = 37.7 bits (86), Expect = 0.004
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 11 MNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNG 55
M T M+ +E+ ME + ME+ MET GME GM+ G+ G
Sbjct: 418 METRAMETEVLETRVMERRGMETCAMETRGMEARGMDARGLEMRG 462
Score = 35.0 bits (79), Expect = 0.026
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMG--TNGVK 57
ME+ M + T VM+ ME+ ME + ME++ M+ G+E+ G + G T G++
Sbjct: 418 METRAMETEVLETRVMERRGMETCAMETRGMEARGMDARGLEMRGPVPSSRGPMTGGIQ 476
Score = 33.9 bits (76), Expect = 0.058
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 10/59 (16%)
Query: 22 ESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGLEWNG 80
+S ME + ME++ +ET ME GME M T G ME + + GLE G
Sbjct: 414 DSRAMETRAMETEVLETRVMERRGMETCAMETRG----------MEARGMDARGLEMRG 462
Score = 32.7 bits (73), Expect = 0.13
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 21 MESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVE 62
ME+ ME + +E++ ME GME ME GM G+ +E
Sbjct: 418 METRAMETEVLETRVMERRGMETCAMETRGMEARGMDARGLE 459
>gi|30061565 La ribonucleoprotein domain family member 2 isoform 2
[Homo sapiens]
Length = 522
Score = 36.2 bits (82), Expect = 0.012
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 6 MVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENR 65
+V G + + Q N+ N E +E KR ++ E +LNG G N + +E +
Sbjct: 10 LVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGEN----VSEDEAQ 65
Query: 66 MECKRKERNGLEWNGIHWNGRECSVMDRPG 95
+RK N +W +H + +RPG
Sbjct: 66 SSNQRKRANKHKWVPLHLDVVRSESQERPG 95
>gi|30061569 La ribonucleoprotein domain family member 2 isoform 3
[Homo sapiens]
Length = 358
Score = 36.2 bits (82), Expect = 0.012
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 6 MVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENR 65
+V G + + Q N+ N E +E KR ++ E +LNG G N + +E +
Sbjct: 10 LVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGEN----VSEDEAQ 65
Query: 66 MECKRKERNGLEWNGIHWNGRECSVMDRPG 95
+RK N +W +H + +RPG
Sbjct: 66 SSNQRKRANKHKWVPLHLDVVRSESQERPG 95
>gi|30061567 La ribonucleoprotein domain family member 2 isoform 1
[Homo sapiens]
Length = 914
Score = 36.2 bits (82), Expect = 0.012
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 6 MVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENR 65
+V G + + Q N+ N E +E KR ++ E +LNG G N + +E +
Sbjct: 10 LVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGEN----VSEDEAQ 65
Query: 66 MECKRKERNGLEWNGIHWNGRECSVMDRPG 95
+RK N +W +H + +RPG
Sbjct: 66 SSNQRKRANKHKWVPLHLDVVRSESQERPG 95
>gi|64276808 ADAM metallopeptidase with thrombospondin type 1 motif,
6 preproprotein [Homo sapiens]
Length = 1117
Score = 31.6 bits (70), Expect = 0.29
Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 12/80 (15%)
Query: 75 GLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNVIECNGCKKMNPKSL 134
G WN W+ ECS AT + G++ + C + N I N + K
Sbjct: 841 GFTWNHQPWS--ECS----------ATCAGGVQRQEVVCKRLDDNSIVQNNYCDPDSKPP 888
Query: 135 TGKAGCRKELTPMEWNRMEW 154
+ C E P EW +W
Sbjct: 889 ENQRACNTEPCPPEWFIGDW 908
>gi|19923901 hypothetical protein LOC91523 [Homo sapiens]
Length = 432
Score = 31.2 bits (69), Expect = 0.37
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 70 RKERNGLEWNGIHWNGR 86
R R L W+G+HWNGR
Sbjct: 219 RHARENLHWDGVHWNGR 235
>gi|239749338 PREDICTED: hypothetical protein XP_002346998 [Homo
sapiens]
Length = 230
Score = 30.4 bits (67), Expect = 0.64
Identities = 24/96 (25%), Positives = 39/96 (40%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E+NG + + N +E+NG +E+ T +E NG + NG +
Sbjct: 112 LENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPH 171
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGI 96
+E N E NG + NGR ++ GI
Sbjct: 172 LENNGRLTPHLENNGPLAPHLENNGRLAPQLENNGI 207
Score = 28.5 bits (62), Expect = 2.4
Identities = 29/125 (23%), Positives = 48/125 (38%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E+ G + + N +E+NG ++E+ T +E NG + NG
Sbjct: 82 LENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPHLENNGRLTPH 141
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
+E N E NG + NGR ++ G +NG +E N +
Sbjct: 142 LENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPHLENNGRLAPQ 201
Query: 121 IECNG 125
+E NG
Sbjct: 202 LENNG 206
Score = 27.3 bits (59), Expect = 5.4
Identities = 29/125 (23%), Positives = 47/125 (37%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E+NG + + +E+NG +E+ T +E NG + NG
Sbjct: 72 LENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPDLENNGRLTPDLENNGRLTPH 131
Query: 61 VEENRMECKRKERNGLEWNGIHWNGRECSVMDRPGIKWNATVSNGIKMYGMECNETESNV 120
+E N E NG + NGR ++ G +NG +E N +
Sbjct: 132 LENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPHLENNGRLTPHLENNGPLAPH 191
Query: 121 IECNG 125
+E NG
Sbjct: 192 LENNG 196
Score = 26.9 bits (58), Expect = 7.0
Identities = 34/135 (25%), Positives = 53/135 (39%), Gaps = 10/135 (7%)
Query: 1 MESNGMVWNGMNTNVMQPNRMESNGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYA 60
+E+NG + + +E+NG +E+K T +E NG + NG
Sbjct: 52 VENNGRLAPHLENKGRLTPHLENNGRLTPHLENKGRLTPDLENNGCLTPHLENNGRLTPD 111
Query: 61 VEENRMECKRKERNG-----LEWNG-----IHWNGRECSVMDRPGIKWNATVSNGIKMYG 110
+E N E NG LE NG + NGR ++ G +NG +
Sbjct: 112 LENNGRLTPDLENNGRLTPHLENNGRLTPHLENNGRLTPHLENNGRLAPQLENNGRLVPH 171
Query: 111 MECNETESNVIECNG 125
+E N + +E NG
Sbjct: 172 LENNGRLTPHLENNG 186
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 29.6 bits (65), Expect = 1.1
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 8/46 (17%)
Query: 1 MESNGMV-WNG----MNTNVMQPNRMESNGMEYKEMESKRMETNGM 41
MESN ++ WN N +++ NRMESNG+E+ +ME++G+
Sbjct: 1 MESNAIIEWNRHRMESNAIIIKWNRMESNGVEWNH---HQMESSGI 43
>gi|14149793 glutamine rich 2 [Homo sapiens]
Length = 1663
Score = 29.3 bits (64), Expect = 1.4
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 24 NGMEYKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENRMECKRKERNGL 76
+GM + + + ME GM+ G ++GMG G+ +++ + +++GL
Sbjct: 307 HGMTFPGTDQRSMEPLGMDQRGCVISGMGQQGLVPPGIDQQGLTLPVVDQHGL 359
>gi|109150419 missing oocyte, meiosis regulator, homolog [Homo
sapiens]
Length = 875
Score = 28.9 bits (63), Expect = 1.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 105 GIKMYGMECNETESNVIECNGCKKMNPK 132
G YG+ + T+S V C GC+K P+
Sbjct: 757 GFSQYGVSGSPTKSKVTSCPGCRKPLPR 784
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 28.5 bits (62), Expect = 2.4
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 7 VWNGMNTNVMQPNRMESNGME-YKEMESKRMETNGMELNGMELNGMGTNGVKLYAVEENR 65
V NG + ++ R + + KE+E +R+E ME +E + ++ +E+ +
Sbjct: 131 VQNGPSQEELEIQRRQLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQ 190
Query: 66 MECKRKERNGLE 77
+E +R+ER E
Sbjct: 191 LERERQERERQE 202
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,300,186
Number of Sequences: 37866
Number of extensions: 263707
Number of successful extensions: 1151
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 433
Number of HSP's gapped (non-prelim): 197
length of query: 155
length of database: 18,247,518
effective HSP length: 93
effective length of query: 62
effective length of database: 14,725,980
effective search space: 913010760
effective search space used: 913010760
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.