Search of human proteins with 239746697

Search of human proteins with 239746697

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239746697 PREDICTED: hypothetical protein XP_002343833 [Homo
sapiens]
         (181 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757684 PREDICTED: hypothetical protein [Homo sapiens]           364   e-101
gi|239752174 PREDICTED: hypothetical protein XP_002348160 [Homo ...   364   e-101
gi|239746697 PREDICTED: hypothetical protein XP_002343833 [Homo ...   364   e-101
gi|239746665 PREDICTED: hypothetical protein XP_002343826 [Homo ...   349   6e-97
gi|82546845 breakpoint cluster region isoform 2 [Homo sapiens]        169   9e-43
gi|82546843 breakpoint cluster region isoform 1 [Homo sapiens]        169   9e-43
gi|229094128 active breakpoint cluster region-related  protein i...   112   1e-25
gi|38679957 active breakpoint cluster region-related  protein is...   112   1e-25
gi|38679954 active breakpoint cluster region-related  protein is...   112   1e-25
gi|226693398 Rho GTPase activating protein 27 isoform b [Homo sa...    57   1e-08
gi|40548322 Rho GTPase activating protein 27 isoform a [Homo sap...    57   1e-08
gi|85815829 SH3-domain binding protein 1 [Homo sapiens]                55   4e-08
gi|203097003 Rho GTPase activating protein 21 [Homo sapiens]           52   3e-07
gi|122939147 Rho GTPase activating protein 9 isoform 1 [Homo sap...    50   1e-06
gi|91208437 GEM interacting protein [Homo sapiens]                     50   1e-06
gi|122939149 Rho GTPase activating protein 9 isoform 3 [Homo sap...    50   1e-06
gi|4757980 beta chimerin isoform 2 [Homo sapiens]                      49   2e-06
gi|91106928 beta chimerin isoform 1 [Homo sapiens]                     49   2e-06
gi|47834348 minor histocompatibility antigen HA-1 [Homo sapiens]       49   2e-06
gi|208022687 GTPase regulator associated with the focal adhesion...    47   7e-06
gi|7662208 GTPase regulator associated with the focal adhesion k...    47   7e-06
gi|34013590 Rho GTPase activating protein 2 [Homo sapiens]             47   7e-06
gi|26986534 Rho GTPase activating protein 12 [Homo sapiens]            47   9e-06
gi|4502813 chimerin (chimaerin) 1 isoform a [Homo sapiens]             47   1e-05
gi|209364623 chimerin (chimaerin) 1 isoform b [Homo sapiens]           47   1e-05
gi|50843948 Rho GTPase activating protein 10 [Homo sapiens]            45   3e-05
gi|149274655 synapse defective 1, Rho GTPase, homolog 2 [Homo sa...    45   3e-05
gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]           45   4e-05
gi|111154090 Rho GTPase activating protein 24 isoform 3 [Homo sa...    45   4e-05
gi|111154099 Rho GTPase activating protein 24 isoform 2 [Homo sa...    45   4e-05

>gi|239757684 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 181

 Score =  364 bits (934), Expect = e-101
 Identities = 181/181 (100%), Positives = 181/181 (100%)

Query: 1   MMTSLNCARTRVPGAPCDHLGRGLRLVVTQGSHPLPPAALSDPVARKSCMLNLLLSLPEA 60
           MMTSLNCARTRVPGAPCDHLGRGLRLVVTQGSHPLPPAALSDPVARKSCMLNLLLSLPEA
Sbjct: 1   MMTSLNCARTRVPGAPCDHLGRGLRLVVTQGSHPLPPAALSDPVARKSCMLNLLLSLPEA 60

Query: 61  NLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDS 120
           NLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDS
Sbjct: 61  NLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDS 120

Query: 121 RSLEVMSQIQIPNKMLECNPWTIRVLAAFGLPLSAWLRCSQEWVLKSLENRIRGGLGRGQ 180
           RSLEVMSQIQIPNKMLECNPWTIRVLAAFGLPLSAWLRCSQEWVLKSLENRIRGGLGRGQ
Sbjct: 121 RSLEVMSQIQIPNKMLECNPWTIRVLAAFGLPLSAWLRCSQEWVLKSLENRIRGGLGRGQ 180

Query: 181 A 181
           A
Sbjct: 181 A 181


>gi|239752174 PREDICTED: hypothetical protein XP_002348160 [Homo
           sapiens]
          Length = 181

 Score =  364 bits (934), Expect = e-101
 Identities = 181/181 (100%), Positives = 181/181 (100%)

Query: 1   MMTSLNCARTRVPGAPCDHLGRGLRLVVTQGSHPLPPAALSDPVARKSCMLNLLLSLPEA 60
           MMTSLNCARTRVPGAPCDHLGRGLRLVVTQGSHPLPPAALSDPVARKSCMLNLLLSLPEA
Sbjct: 1   MMTSLNCARTRVPGAPCDHLGRGLRLVVTQGSHPLPPAALSDPVARKSCMLNLLLSLPEA 60

Query: 61  NLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDS 120
           NLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDS
Sbjct: 61  NLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDS 120

Query: 121 RSLEVMSQIQIPNKMLECNPWTIRVLAAFGLPLSAWLRCSQEWVLKSLENRIRGGLGRGQ 180
           RSLEVMSQIQIPNKMLECNPWTIRVLAAFGLPLSAWLRCSQEWVLKSLENRIRGGLGRGQ
Sbjct: 121 RSLEVMSQIQIPNKMLECNPWTIRVLAAFGLPLSAWLRCSQEWVLKSLENRIRGGLGRGQ 180

Query: 181 A 181
           A
Sbjct: 181 A 181


>gi|239746697 PREDICTED: hypothetical protein XP_002343833 [Homo
           sapiens]
          Length = 181

 Score =  364 bits (934), Expect = e-101
 Identities = 181/181 (100%), Positives = 181/181 (100%)

Query: 1   MMTSLNCARTRVPGAPCDHLGRGLRLVVTQGSHPLPPAALSDPVARKSCMLNLLLSLPEA 60
           MMTSLNCARTRVPGAPCDHLGRGLRLVVTQGSHPLPPAALSDPVARKSCMLNLLLSLPEA
Sbjct: 1   MMTSLNCARTRVPGAPCDHLGRGLRLVVTQGSHPLPPAALSDPVARKSCMLNLLLSLPEA 60

Query: 61  NLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDS 120
           NLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDS
Sbjct: 61  NLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDS 120

Query: 121 RSLEVMSQIQIPNKMLECNPWTIRVLAAFGLPLSAWLRCSQEWVLKSLENRIRGGLGRGQ 180
           RSLEVMSQIQIPNKMLECNPWTIRVLAAFGLPLSAWLRCSQEWVLKSLENRIRGGLGRGQ
Sbjct: 121 RSLEVMSQIQIPNKMLECNPWTIRVLAAFGLPLSAWLRCSQEWVLKSLENRIRGGLGRGQ 180

Query: 181 A 181
           A
Sbjct: 181 A 181


>gi|239746665 PREDICTED: hypothetical protein XP_002343826 [Homo
           sapiens]
          Length = 181

 Score =  349 bits (896), Expect = 6e-97
 Identities = 174/181 (96%), Positives = 176/181 (97%)

Query: 1   MMTSLNCARTRVPGAPCDHLGRGLRLVVTQGSHPLPPAALSDPVARKSCMLNLLLSLPEA 60
           MMTSLNCARTRVPGAPCDHLGRGLRLVVTQGS PLPPAALSDPVA+KSCMLNLL SLPEA
Sbjct: 1   MMTSLNCARTRVPGAPCDHLGRGLRLVVTQGSDPLPPAALSDPVAKKSCMLNLLSSLPEA 60

Query: 61  NLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPITMTDS 120
           NLLTFLFLLD LER+AEKEAVNKMSLHNL TVFGPTLLRPSEKESKLPANPSQPITMTDS
Sbjct: 61  NLLTFLFLLDHLERMAEKEAVNKMSLHNLGTVFGPTLLRPSEKESKLPANPSQPITMTDS 120

Query: 121 RSLEVMSQIQIPNKMLECNPWTIRVLAAFGLPLSAWLRCSQEWVLKSLENRIRGGLGRGQ 180
            SLEVMSQIQIPNKMLECNPWTIRVLAAFGLPLSAWLRCSQEWVLKSLENRIRGGLGRGQ
Sbjct: 121 WSLEVMSQIQIPNKMLECNPWTIRVLAAFGLPLSAWLRCSQEWVLKSLENRIRGGLGRGQ 180

Query: 181 A 181
           A
Sbjct: 181 A 181


>gi|82546845 breakpoint cluster region isoform 2 [Homo sapiens]
          Length = 1227

 Score =  169 bits (429), Expect = 9e-43
 Identities = 86/93 (92%), Positives = 91/93 (97%)

Query: 39   ALSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLL 98
            ALSDPVA++SCMLNLLLSLPEANLLTFLFLLD L+RVAEKEAVNKMSLHNLATVFGPTLL
Sbjct: 1109 ALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAEKEAVNKMSLHNLATVFGPTLL 1168

Query: 99   RPSEKESKLPANPSQPITMTDSRSLEVMSQIQI 131
            RPSEKESKLPANPSQPITMTDS SLEVMSQ+Q+
Sbjct: 1169 RPSEKESKLPANPSQPITMTDSWSLEVMSQVQV 1201


>gi|82546843 breakpoint cluster region isoform 1 [Homo sapiens]
          Length = 1271

 Score =  169 bits (429), Expect = 9e-43
 Identities = 86/93 (92%), Positives = 91/93 (97%)

Query: 39   ALSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLL 98
            ALSDPVA++SCMLNLLLSLPEANLLTFLFLLD L+RVAEKEAVNKMSLHNLATVFGPTLL
Sbjct: 1153 ALSDPVAKESCMLNLLLSLPEANLLTFLFLLDHLKRVAEKEAVNKMSLHNLATVFGPTLL 1212

Query: 99   RPSEKESKLPANPSQPITMTDSRSLEVMSQIQI 131
            RPSEKESKLPANPSQPITMTDS SLEVMSQ+Q+
Sbjct: 1213 RPSEKESKLPANPSQPITMTDSWSLEVMSQVQV 1245


>gi|229094128 active breakpoint cluster region-related  protein
           isoform c [Homo sapiens]
          Length = 813

 Score =  112 bits (281), Expect = 1e-25
 Identities = 58/93 (62%), Positives = 74/93 (79%), Gaps = 5/93 (5%)

Query: 39  ALSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLL 98
           ALSDP A+++CM++LL SLP+ NL+TFLFLL+ L+RVAEKE +NKMSLHNLATVFGPTLL
Sbjct: 700 ALSDPAAKENCMMHLLRSLPDPNLITFLFLLEHLKRVAEKEPINKMSLHNLATVFGPTLL 759

Query: 99  RPSEKESKLPANPSQPITMTDSRSLEVMSQIQI 131
           RPSE ESK     +   +  D  S +VM+Q+Q+
Sbjct: 760 RPSEVESK-----AHLTSAADIWSHDVMAQVQV 787


>gi|38679957 active breakpoint cluster region-related  protein
           isoform a [Homo sapiens]
          Length = 859

 Score =  112 bits (281), Expect = 1e-25
 Identities = 58/93 (62%), Positives = 74/93 (79%), Gaps = 5/93 (5%)

Query: 39  ALSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLL 98
           ALSDP A+++CM++LL SLP+ NL+TFLFLL+ L+RVAEKE +NKMSLHNLATVFGPTLL
Sbjct: 746 ALSDPAAKENCMMHLLRSLPDPNLITFLFLLEHLKRVAEKEPINKMSLHNLATVFGPTLL 805

Query: 99  RPSEKESKLPANPSQPITMTDSRSLEVMSQIQI 131
           RPSE ESK     +   +  D  S +VM+Q+Q+
Sbjct: 806 RPSEVESK-----AHLTSAADIWSHDVMAQVQV 833


>gi|38679954 active breakpoint cluster region-related  protein
           isoform b [Homo sapiens]
          Length = 822

 Score =  112 bits (281), Expect = 1e-25
 Identities = 58/93 (62%), Positives = 74/93 (79%), Gaps = 5/93 (5%)

Query: 39  ALSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLL 98
           ALSDP A+++CM++LL SLP+ NL+TFLFLL+ L+RVAEKE +NKMSLHNLATVFGPTLL
Sbjct: 709 ALSDPAAKENCMMHLLRSLPDPNLITFLFLLEHLKRVAEKEPINKMSLHNLATVFGPTLL 768

Query: 99  RPSEKESKLPANPSQPITMTDSRSLEVMSQIQI 131
           RPSE ESK     +   +  D  S +VM+Q+Q+
Sbjct: 769 RPSEVESK-----AHLTSAADIWSHDVMAQVQV 796


>gi|226693398 Rho GTPase activating protein 27 isoform b [Homo
           sapiens]
          Length = 521

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 30/69 (43%), Positives = 40/69 (57%)

Query: 40  LSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLR 99
           L D   R  C+ +L+ SLP  N  T   L   L RV E    N+MS+ ++A VFGPTLLR
Sbjct: 429 LQDQARRSRCVRDLVRSLPAPNHDTLRMLFQHLCRVIEHGEQNRMSVQSVAIVFGPTLLR 488

Query: 100 PSEKESKLP 108
           P  +E+ +P
Sbjct: 489 PEVEETSMP 497


>gi|40548322 Rho GTPase activating protein 27 isoform a [Homo
           sapiens]
          Length = 548

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 30/69 (43%), Positives = 40/69 (57%)

Query: 40  LSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLR 99
           L D   R  C+ +L+ SLP  N  T   L   L RV E    N+MS+ ++A VFGPTLLR
Sbjct: 456 LQDQARRSRCVRDLVRSLPAPNHDTLRMLFQHLCRVIEHGEQNRMSVQSVAIVFGPTLLR 515

Query: 100 PSEKESKLP 108
           P  +E+ +P
Sbjct: 516 PEVEETSMP 524


>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
          Length = 701

 Score = 54.7 bits (130), Expect = 4e-08
 Identities = 29/67 (43%), Positives = 40/67 (59%)

Query: 38  AALSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTL 97
           A+L +P AR   +  +   LP  NL    +L+  L R+AE++ VNKM+  N+A V GP L
Sbjct: 372 ASLKEPGARLQALQEVCSRLPPENLSNLRYLMKFLARLAEEQEVNKMTPSNIAIVLGPNL 431

Query: 98  LRPSEKE 104
           L P EKE
Sbjct: 432 LWPPEKE 438


>gi|203097003 Rho GTPase activating protein 21 [Homo sapiens]
          Length = 1958

 Score = 52.0 bits (123), Expect = 3e-07
 Identities = 29/61 (47%), Positives = 35/61 (57%)

Query: 42   DPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLRPS 101
            DP+ R   +  L+  LPE +  T  FL   L+ VAE    NKM   NLA VFGPTL+R S
Sbjct: 1251 DPLDRLKTLKRLIHDLPEHHYETLKFLSAHLKTVAENSEKNKMEPRNLAIVFGPTLVRTS 1310

Query: 102  E 102
            E
Sbjct: 1311 E 1311


>gi|122939147 Rho GTPase activating protein 9 isoform 1 [Homo
           sapiens]
          Length = 731

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 30/76 (39%), Positives = 42/76 (55%)

Query: 39  ALSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLL 98
           ALS+     S +  L+ S+P+ N  T  +LL+ L RV      N+M+ HNL  VFGPTL 
Sbjct: 640 ALSESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPHNLGIVFGPTLF 699

Query: 99  RPSEKESKLPANPSQP 114
           RP ++ S   A+   P
Sbjct: 700 RPEQETSDPAAHALYP 715


>gi|91208437 GEM interacting protein [Homo sapiens]
          Length = 970

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 28/59 (47%), Positives = 35/59 (59%)

Query: 53  LLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLRPSEKESKLPANP 111
           LL+ LP++N  T   L+  L RVA +   NKMS +NL  VFGPTLLRP +      A P
Sbjct: 674 LLVQLPDSNYNTLRHLVAHLFRVAARFMENKMSANNLGIVFGPTLLRPPDGPRAASAIP 732


>gi|122939149 Rho GTPase activating protein 9 isoform 3 [Homo
           sapiens]
          Length = 547

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 30/76 (39%), Positives = 42/76 (55%)

Query: 39  ALSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLL 98
           ALS+     S +  L+ S+P+ N  T  +LL+ L RV      N+M+ HNL  VFGPTL 
Sbjct: 456 ALSESEQCLSQIQELIGSMPKPNHDTLRYLLEHLCRVIAHSDKNRMTPHNLGIVFGPTLF 515

Query: 99  RPSEKESKLPANPSQP 114
           RP ++ S   A+   P
Sbjct: 516 RPEQETSDPAAHALYP 531


>gi|4757980 beta chimerin isoform 2 [Homo sapiens]
          Length = 468

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 8/97 (8%)

Query: 38  AALSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTL 97
           A +S+   R   +  +L+ LP A+  T  +L+  L++V   E  N M+  NL  VFGPTL
Sbjct: 376 AKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTL 435

Query: 98  LRPSEKESKLPANPSQPITMTDSRSLEVMSQIQIPNK 134
           +RP E         S   T+ D R  +++ QI I N+
Sbjct: 436 MRPPE--------DSTLTTLHDMRYQKLIVQILIENE 464


>gi|91106928 beta chimerin isoform 1 [Homo sapiens]
          Length = 332

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 8/97 (8%)

Query: 38  AALSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTL 97
           A +S+   R   +  +L+ LP A+  T  +L+  L++V   E  N M+  NL  VFGPTL
Sbjct: 240 AKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTL 299

Query: 98  LRPSEKESKLPANPSQPITMTDSRSLEVMSQIQIPNK 134
           +RP E         S   T+ D R  +++ QI I N+
Sbjct: 300 MRPPE--------DSTLTTLHDMRYQKLIVQILIENE 328


>gi|47834348 minor histocompatibility antigen HA-1 [Homo sapiens]
          Length = 1136

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 28/62 (45%), Positives = 34/62 (54%)

Query: 44  VARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLRPSEK 103
           VA    +  LL  LP  N  +  +LL  L R+ E E  NKM+  NL  VFGPTLLRP   
Sbjct: 885 VALAGRLRELLRDLPPENRASLQYLLRHLRRIVEVEQDNKMTPGNLGIVFGPTLLRPRPT 944

Query: 104 ES 105
           E+
Sbjct: 945 EA 946


>gi|208022687 GTPase regulator associated with the focal adhesion
           kinase pp125 isoform b [Homo sapiens]
          Length = 759

 Score = 47.4 bits (111), Expect = 7e-06
 Identities = 27/66 (40%), Positives = 37/66 (56%)

Query: 38  AALSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTL 97
           A L +  +R S + +L+  LPE N      L++ L  VA     N M++ NL  VFGPTL
Sbjct: 477 AKLENQESRVSEIHSLVHRLPEKNRQMLQLLMNHLANVANNHKQNLMTVANLGVVFGPTL 536

Query: 98  LRPSEK 103
           LRP E+
Sbjct: 537 LRPQEE 542


>gi|7662208 GTPase regulator associated with the focal adhesion
           kinase pp125 isoform a [Homo sapiens]
          Length = 814

 Score = 47.4 bits (111), Expect = 7e-06
 Identities = 27/66 (40%), Positives = 37/66 (56%)

Query: 38  AALSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTL 97
           A L +  +R S + +L+  LPE N      L++ L  VA     N M++ NL  VFGPTL
Sbjct: 477 AKLENQESRVSEIHSLVHRLPEKNRQMLQLLMNHLANVANNHKQNLMTVANLGVVFGPTL 536

Query: 98  LRPSEK 103
           LRP E+
Sbjct: 537 LRPQEE 542


>gi|34013590 Rho GTPase activating protein 2 [Homo sapiens]
          Length = 698

 Score = 47.4 bits (111), Expect = 7e-06
 Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 9/68 (13%)

Query: 56  SLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLRPSEKESKLPANPSQPI 115
           +LP+AN     ++   L+ V     VNKMS+ NLATVFGP +LRP  ++         P+
Sbjct: 275 NLPQANYNLLRYICKFLDEVQAYSNVNKMSVQNLATVFGPNILRPQVED---------PV 325

Query: 116 TMTDSRSL 123
           T+ +  SL
Sbjct: 326 TIMEGTSL 333


>gi|26986534 Rho GTPase activating protein 12 [Homo sapiens]
          Length = 846

 Score = 47.0 bits (110), Expect = 9e-06
 Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 38  AALSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTL 97
           A   +P  R + + +L+  LP+ N  T   L   L RV E    N+M+  ++A VFGPTL
Sbjct: 753 AIKQEPRQRVAAVKDLIRQLPKPNQDTMQILFRHLRRVIENGEKNRMTYQSIAIVFGPTL 812

Query: 98  LRPSEKES 105
           L+P EKE+
Sbjct: 813 LKP-EKET 819


>gi|4502813 chimerin (chimaerin) 1 isoform a [Homo sapiens]
          Length = 459

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 27  VVTQGSHP--LPPAALSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKM 84
           ++T  ++P  +  A + DP  +   +   L  LP A+  T  +L+  L+RV   E  N M
Sbjct: 354 LITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLM 413

Query: 85  SLHNLATVFGPTLLRPSEKESKLPAN 110
           +  NL  VFGPTL+R  E ++    N
Sbjct: 414 NAENLGIVFGPTLMRSPELDAMAALN 439


>gi|209364623 chimerin (chimaerin) 1 isoform b [Homo sapiens]
          Length = 433

 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 27  VVTQGSHP--LPPAALSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKM 84
           ++T  ++P  +  A + DP  +   +   L  LP A+  T  +L+  L+RV   E  N M
Sbjct: 328 LITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLM 387

Query: 85  SLHNLATVFGPTLLRPSEKESKLPAN 110
           +  NL  VFGPTL+R  E ++    N
Sbjct: 388 NAENLGIVFGPTLMRSPELDAMAALN 413


>gi|50843948 Rho GTPase activating protein 10 [Homo sapiens]
          Length = 786

 Score = 45.1 bits (105), Expect = 3e-05
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 37  PAALSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPT 96
           PA    P +R + +  L+  LPE N      L+  L  V+     N M++ NL  VFGPT
Sbjct: 482 PAKSGSPESRVNAIHFLVHKLPEKNKEMLDILVKHLTNVSNHSKQNLMTVANLGVVFGPT 541

Query: 97  LLRPSEK 103
           L+RP E+
Sbjct: 542 LMRPQEE 548


>gi|149274655 synapse defective 1, Rho GTPase, homolog 2 [Homo
           sapiens]
          Length = 1194

 Score = 45.1 bits (105), Expect = 3e-05
 Identities = 25/55 (45%), Positives = 31/55 (56%)

Query: 51  LNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLRPSEKES 105
           ++LL  LPE    T   LLD L+ VA    VNKM+  NLA  FGP LL   ++ S
Sbjct: 940 VDLLDCLPEIEKATLKMLLDHLKLVASYHEVNKMTCQNLAVCFGPVLLSQRQEPS 994


>gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]
          Length = 1397

 Score = 44.7 bits (104), Expect = 4e-05
 Identities = 25/63 (39%), Positives = 33/63 (52%)

Query: 40  LSDPVARKSCMLNLLLSLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLR 99
           + D   R   +  L+  LP     T  FL+  L+ +A+    NKM   NLA VFGPTL+R
Sbjct: 913 IEDARERMRTLRKLIRDLPGHYYETLKFLVGHLKTIADHSEKNKMEPRNLALVFGPTLVR 972

Query: 100 PSE 102
            SE
Sbjct: 973 TSE 975


>gi|111154090 Rho GTPase activating protein 24 isoform 3 [Homo
           sapiens]
          Length = 653

 Score = 44.7 bits (104), Expect = 4e-05
 Identities = 22/49 (44%), Positives = 29/49 (59%)

Query: 56  SLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLRPSEKE 104
           SLP  N     ++   L+ V     VNKMS+ NLATVFGP +LRP  ++
Sbjct: 160 SLPVVNYNLLKYICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKVED 208


>gi|111154099 Rho GTPase activating protein 24 isoform 2 [Homo
           sapiens]
          Length = 655

 Score = 44.7 bits (104), Expect = 4e-05
 Identities = 22/49 (44%), Positives = 29/49 (59%)

Query: 56  SLPEANLLTFLFLLDRLERVAEKEAVNKMSLHNLATVFGPTLLRPSEKE 104
           SLP  N     ++   L+ V     VNKMS+ NLATVFGP +LRP  ++
Sbjct: 162 SLPVVNYNLLKYICRFLDEVQSYSGVNKMSVQNLATVFGPNILRPKVED 210


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,149,214
Number of Sequences: 37866
Number of extensions: 293353
Number of successful extensions: 1034
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 935
Number of HSP's gapped (non-prelim): 110
length of query: 181
length of database: 18,247,518
effective HSP length: 96
effective length of query: 85
effective length of database: 14,612,382
effective search space: 1242052470
effective search space used: 1242052470
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.