Search of human proteins with 239746558

Search of human proteins with 239746558

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo
sapiens]
         (616 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo ...  1261   0.0  
gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo ...  1199   0.0  
gi|239757014 PREDICTED: hypothetical protein [Homo sapiens]           528   e-150
gi|148528975 LON peptidase N-terminal domain and ring finger 2 [...   218   1e-56
gi|73747840 LON peptidase N-terminal domain and ring finger 3 is...    43   7e-04
gi|37622896 LON peptidase N-terminal domain and ring finger 3 is...    43   7e-04
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]            37   0.041
gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo ...    37   0.041
gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo ...    37   0.041
gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo ...    37   0.041
gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo ...    37   0.041
gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo s...    37   0.041
gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]            37   0.054
gi|169204628 PREDICTED: similar to hCG2045644 [Homo sapiens]           37   0.054
gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]            37   0.054
gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]            37   0.054
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]                37   0.054
gi|239750652 PREDICTED: hypothetical protein XP_002347499 [Homo ...    36   0.12 
gi|239744960 PREDICTED: hypothetical protein XP_002343317 [Homo ...    36   0.12 
gi|21735550 mitogen-activated protein kinase kinase kinase 10 [H...    35   0.16 
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]       35   0.20 
gi|48526509 translocase of inner mitochondrial membrane 50 homol...    35   0.20 
gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ...    35   0.27 
gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo ...    35   0.27 
gi|87298836 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Ho...    35   0.27 
gi|23200002 NOL1/NOP2/Sun domain family, member 5C isoform 2 [Ho...    35   0.27 
gi|23200000 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Ho...    35   0.27 
gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]            34   0.45 
gi|239756120 PREDICTED: hypothetical protein [Homo sapiens]            34   0.45 
gi|239751841 PREDICTED: hypothetical protein [Homo sapiens]            34   0.45 

>gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo
           sapiens]
          Length = 616

 Score = 1261 bits (3262), Expect = 0.0
 Identities = 616/616 (100%), Positives = 616/616 (100%)

Query: 1   MSESQEDVGAEYLIRDTGRAIVTSPGNFLLPVRRLWPCSRRPVPSSSALPLLHAFAPGPQ 60
           MSESQEDVGAEYLIRDTGRAIVTSPGNFLLPVRRLWPCSRRPVPSSSALPLLHAFAPGPQ
Sbjct: 1   MSESQEDVGAEYLIRDTGRAIVTSPGNFLLPVRRLWPCSRRPVPSSSALPLLHAFAPGPQ 60

Query: 61  GRSPAGISTEPVPPPPQCPGCDCGEPIAQRLEEGDEAFRQSEYQKAAGLFRSTLARLAQP 120
           GRSPAGISTEPVPPPPQCPGCDCGEPIAQRLEEGDEAFRQSEYQKAAGLFRSTLARLAQP
Sbjct: 61  GRSPAGISTEPVPPPPQCPGCDCGEPIAQRLEEGDEAFRQSEYQKAAGLFRSTLARLAQP 120

Query: 121 DRGQCLRLGNALARADRLPVALGAFCVALRLEALRPEELGELAELAGGLVCPGLRERPLF 180
           DRGQCLRLGNALARADRLPVALGAFCVALRLEALRPEELGELAELAGGLVCPGLRERPLF
Sbjct: 121 DRGQCLRLGNALARADRLPVALGAFCVALRLEALRPEELGELAELAGGLVCPGLRERPLF 180

Query: 181 TGKPGGELEAPALRGAGAERPQALRVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQP 240
           TGKPGGELEAPALRGAGAERPQALRVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQP
Sbjct: 181 TGKPGGELEAPALRGAGAERPQALRVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQP 240

Query: 241 EAALLRMLISFPRPPEQLCKALCSTKKDPRTWGAEGSTERVGATGVHRQLEEDADGKLPF 300
           EAALLRMLISFPRPPEQLCKALCSTKKDPRTWGAEGSTERVGATGVHRQLEEDADGKLPF
Sbjct: 241 EAALLRMLISFPRPPEQLCKALCSTKKDPRTWGAEGSTERVGATGVHRQLEEDADGKLPF 300

Query: 301 VTPGACLGPEDHQIPKASGASEAEERQGQWLPVSRDLAATTEAYLLVPQPTGGHTPGLWA 360
           VTPGACLGPEDHQIPKASGASEAEERQGQWLPVSRDLAATTEAYLLVPQPTGGHTPGLWA
Sbjct: 301 VTPGACLGPEDHQIPKASGASEAEERQGQWLPVSRDLAATTEAYLLVPQPTGGHTPGLWA 360

Query: 361 LPRTLLLHGTCGQKNGYHLDHGVSRSRAALPGEERAPRKYLLGNNTPVSVLGRTSHYLRP 420
           LPRTLLLHGTCGQKNGYHLDHGVSRSRAALPGEERAPRKYLLGNNTPVSVLGRTSHYLRP
Sbjct: 361 LPRTLLLHGTCGQKNGYHLDHGVSRSRAALPGEERAPRKYLLGNNTPVSVLGRTSHYLRP 420

Query: 421 QKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCSPSHLLGRDHLSR 480
           QKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCSPSHLLGRDHLSR
Sbjct: 421 QKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCSPSHLLGRDHLSR 480

Query: 481 PRPRPTRGDPPPSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSS 540
           PRPRPTRGDPPPSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSS
Sbjct: 481 PRPRPTRGDPPPSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSS 540

Query: 541 RTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVHRCRRLEVGGHGSPGANGADMGLVE 600
           RTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVHRCRRLEVGGHGSPGANGADMGLVE
Sbjct: 541 RTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVHRCRRLEVGGHGSPGANGADMGLVE 600

Query: 601 RRSDRLSVQQDIFLTW 616
           RRSDRLSVQQDIFLTW
Sbjct: 601 RRSDRLSVQQDIFLTW 616


>gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo
           sapiens]
          Length = 598

 Score = 1199 bits (3103), Expect = 0.0
 Identities = 584/585 (99%), Positives = 585/585 (100%)

Query: 32  VRRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQRL 91
           +RRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQRL
Sbjct: 14  LRRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQRL 73

Query: 92  EEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQCLRLGNALARADRLPVALGAFCVALRL 151
           EEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQCLRLGNALARADRLPVALGAFCVALRL
Sbjct: 74  EEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQCLRLGNALARADRLPVALGAFCVALRL 133

Query: 152 EALRPEELGELAELAGGLVCPGLRERPLFTGKPGGELEAPALRGAGAERPQALRVNVVLS 211
           EALRPEELGELAELAGGLVCPGLRERPLFTGKPGGELEAPALRGAGAERPQALRVNVVLS
Sbjct: 134 EALRPEELGELAELAGGLVCPGLRERPLFTGKPGGELEAPALRGAGAERPQALRVNVVLS 193

Query: 212 RKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLRMLISFPRPPEQLCKALCSTKKDPRT 271
           RKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLRMLISFPRPPEQLCKALCSTKKDPRT
Sbjct: 194 RKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLRMLISFPRPPEQLCKALCSTKKDPRT 253

Query: 272 WGAEGSTERVGATGVHRQLEEDADGKLPFVTPGACLGPEDHQIPKASGASEAEERQGQWL 331
           WGAEGSTERVGATGVHRQLEEDADGKLPFVTPGACLGPEDHQIPKASGASEAEERQGQWL
Sbjct: 254 WGAEGSTERVGATGVHRQLEEDADGKLPFVTPGACLGPEDHQIPKASGASEAEERQGQWL 313

Query: 332 PVSRDLAATTEAYLLVPQPTGGHTPGLWALPRTLLLHGTCGQKNGYHLDHGVSRSRAALP 391
           PVSRDLAATTEAYLLVPQPTGGHTPGLWALPRTLLLHGTCGQKNGYHLDHGVSRSRAALP
Sbjct: 314 PVSRDLAATTEAYLLVPQPTGGHTPGLWALPRTLLLHGTCGQKNGYHLDHGVSRSRAALP 373

Query: 392 GEERAPRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPL 451
           GEERAPRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPL
Sbjct: 374 GEERAPRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPL 433

Query: 452 VFFASLSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRP 511
           VFFASLSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRP
Sbjct: 434 VFFASLSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRP 493

Query: 512 ARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAV 571
           ARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAV
Sbjct: 494 ARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAV 553

Query: 572 SVRVHRCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW 616
           SVRVHRCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW
Sbjct: 554 SVRVHRCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW 598


>gi|239757014 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 281

 Score =  528 bits (1360), Expect = e-150
 Identities = 258/280 (92%), Positives = 262/280 (93%)

Query: 337 LAATTEAYLLVPQPTGGHTPGLWALPRTLLLHGTCGQKNGYHLDHGVSRSRAALPGEERA 396
           L+AT ++   +    GG   G       LLLHGTCGQKNGYHLDHGVSRSRAALPGEERA
Sbjct: 2   LSATIQSSPCIRSSDGGSQQGWMPESHRLLLHGTCGQKNGYHLDHGVSRSRAALPGEERA 61

Query: 397 PRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFAS 456
           PRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFAS
Sbjct: 62  PRKYLLGNNTPVSVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFAS 121

Query: 457 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRPARRRE 516
           LSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRPARRRE
Sbjct: 122 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRPARRRE 181

Query: 517 RALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVH 576
           RALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVH
Sbjct: 182 RALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVH 241

Query: 577 RCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW 616
           RCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW
Sbjct: 242 RCRRLEVGGHGSPGANGADMGLVERRSDRLSVQQDIFLTW 281


>gi|148528975 LON peptidase N-terminal domain and ring finger 2
           [Homo sapiens]
          Length = 754

 Score =  218 bits (556), Expect = 1e-56
 Identities = 133/222 (59%), Positives = 140/222 (63%), Gaps = 45/222 (20%)

Query: 67  ISTEPVPPPP--QCPGCDCGEPIAQRLEEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQ 124
           +S EPVPPPP  QCPGCD  EPIAQRLEEGDEAFR  +Y+ AA LFRS LA LAQPDRG 
Sbjct: 1   MSPEPVPPPPPPQCPGCDRAEPIAQRLEEGDEAFRAGDYEMAAELFRSMLAGLAQPDRGL 60

Query: 125 CLRLGNALARADRLPVALGAFCVALRLEALRPEELGELAELAGGLV-CPGLRERPLFTGK 183
           CLRLG+ALARA RLP ALGAF  A RL ALRPE   EL ELAGGLV   GLR+RPL    
Sbjct: 61  CLRLGDALARAGRLPEALGAFRGAARLGALRPE---ELEELAGGLVRAVGLRDRPLSAEN 117

Query: 184 PGGELEAPALRG---------------------------------------AGAERPQAL 204
           PGGE EAP   G                                        G  RPQ  
Sbjct: 118 PGGEPEAPGEGGPAPEPRAPRDLLGCPRCRRLLHKPVTLPCGLTVCKRCVEPGPARPQVR 177

Query: 205 RVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLR 246
           RVNVVLS  LE+CFPA+C L RL GQARSLQRQQQPEAALLR
Sbjct: 178 RVNVVLSGLLEKCFPAECRLRRLAGQARSLQRQQQPEAALLR 219


>gi|73747840 LON peptidase N-terminal domain and ring finger 3
           isoform 1 [Homo sapiens]
          Length = 759

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 25/57 (43%), Positives = 32/57 (56%)

Query: 190 APALRGAGAERPQALRVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLR 246
           A   R AG + P  LRVNVVLS  L + FP      +L  +   L R++Q EAALL+
Sbjct: 209 ARGARRAGQQPPPPLRVNVVLSGLLGKLFPGPARASQLRHEGNRLYRERQVEAALLK 265


>gi|37622896 LON peptidase N-terminal domain and ring finger 3
           isoform 2 [Homo sapiens]
          Length = 718

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 25/57 (43%), Positives = 32/57 (56%)

Query: 190 APALRGAGAERPQALRVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLR 246
           A   R AG + P  LRVNVVLS  L + FP      +L  +   L R++Q EAALL+
Sbjct: 209 ARGARRAGQQPPPPLRVNVVLSGLLGKLFPGPARASQLRHEGNRLYRERQVEAALLK 265


>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 350

 Score = 37.4 bits (85), Expect = 0.041
 Identities = 37/135 (27%), Positives = 49/135 (36%), Gaps = 19/135 (14%)

Query: 425 HPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAA----GIRLGCSPSH------LLG 474
           HPP  + AV+  +RA PA    LLP ++  A     A     +R   + +H        G
Sbjct: 58  HPPSSRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTG 117

Query: 475 RDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRR 534
           R    RP P P        P T +     E  P R P   R RA     C         R
Sbjct: 118 RRWRRRPGPSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGC---------R 168

Query: 535 RRRSSSRTRLPSSSG 549
                +R+R P  +G
Sbjct: 169 SSPFPARSRTPGEAG 183


>gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score = 37.4 bits (85), Expect = 0.041
 Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 10/84 (11%)

Query: 409 SVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCS 468
           S+ G  + Y   +    PPV +    PGI A P     + PP+     L PA G  +G  
Sbjct: 160 SIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPP---PGMRPPMGPPIGLPPARGTPIGMP 216

Query: 469 PSHLLGRDHLSRPRPRPTRGDPPP 492
           P  +       RP P   RG PPP
Sbjct: 217 PPGM-------RPPPPGIRGPPPP 233


>gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score = 37.4 bits (85), Expect = 0.041
 Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 10/84 (11%)

Query: 409 SVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCS 468
           S+ G  + Y   +    PPV +    PGI A P     + PP+     L PA G  +G  
Sbjct: 160 SIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPP---PGMRPPMGPPIGLPPARGTPIGMP 216

Query: 469 PSHLLGRDHLSRPRPRPTRGDPPP 492
           P  +       RP P   RG PPP
Sbjct: 217 PPGM-------RPPPPGIRGPPPP 233


>gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score = 37.4 bits (85), Expect = 0.041
 Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 10/84 (11%)

Query: 409 SVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCS 468
           S+ G  + Y   +    PPV +    PGI A P     + PP+     L PA G  +G  
Sbjct: 160 SIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPP---PGMRPPMGPPIGLPPARGTPIGMP 216

Query: 469 PSHLLGRDHLSRPRPRPTRGDPPP 492
           P  +       RP P   RG PPP
Sbjct: 217 PPGM-------RPPPPGIRGPPPP 233


>gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score = 37.4 bits (85), Expect = 0.041
 Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 10/84 (11%)

Query: 409 SVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCS 468
           S+ G  + Y   +    PPV +    PGI A P     + PP+     L PA G  +G  
Sbjct: 160 SIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPP---PGMRPPMGPPIGLPPARGTPIGMP 216

Query: 469 PSHLLGRDHLSRPRPRPTRGDPPP 492
           P  +       RP P   RG PPP
Sbjct: 217 PPGM-------RPPPPGIRGPPPP 233


>gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo
           sapiens]
          Length = 240

 Score = 37.4 bits (85), Expect = 0.041
 Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 10/84 (11%)

Query: 409 SVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCS 468
           S+ G  + Y   +    PPV +    PGI A P     + PP+     L PA G  +G  
Sbjct: 160 SIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPP---PGMRPPMGPPIGLPPARGTPIGMP 216

Query: 469 PSHLLGRDHLSRPRPRPTRGDPPP 492
           P  +       RP P   RG PPP
Sbjct: 217 PPGM-------RPPPPGIRGPPPP 233


>gi|239756899 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 371

 Score = 37.0 bits (84), Expect = 0.054
 Identities = 41/128 (32%), Positives = 48/128 (37%), Gaps = 26/128 (20%)

Query: 481 PRPRPTRGDP-----PPSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRR 535
           P   P RGDP     PP+P+    AR  +   A R    R R L G          R   
Sbjct: 55  PAGEPRRGDPGVAPSPPAPEDS-DARGEDGAAAERRPEPRTRDLSGARGQTTGGEGREGA 113

Query: 536 RRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSV---RVHRC-----------RRL 581
           +    +  LP S+    RRP   A    +RP  PA  V   RV  C           RRL
Sbjct: 114 QTREGKMGLPDSA----RRP--RAPRTPLRPERPAPGVPGGRVAPCTCTSGSPSPRPRRL 167

Query: 582 EVGGHGSP 589
            V G GSP
Sbjct: 168 RVSGRGSP 175


>gi|169204628 PREDICTED: similar to hCG2045644 [Homo sapiens]
          Length = 363

 Score = 37.0 bits (84), Expect = 0.054
 Identities = 46/202 (22%), Positives = 74/202 (36%), Gaps = 43/202 (21%)

Query: 33  RRLWPCSRRPVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQRLE 92
           RR    S+ P+P++   P      P P GR+   ++  PVP  P C       P+   + 
Sbjct: 129 RRHVTSSQPPLPATQIRPR----NPCPAGRAGGHVAGAPVPAAPWCMYLWRSSPLGSLIT 184

Query: 93  EGDEAFRQSEYQKAAGLFRSTLARLAQPD----------RGQCLRLGNALARADRLPVAL 142
             ++ FR    +    ++ +++  L  P           RGQC   G + A A       
Sbjct: 185 GNNQRFRDHPGEN-RNIYIASIPPLGVPQDMPSPGLAGRRGQCASPGTSRAAA------- 236

Query: 143 GAFCVALRLEALRPEELGELAELAGGLVCPGLRERPLFTGKPGGELEAPALRGAGAERPQ 202
                A R  A       ++A  AG +    L   P  TG                 R +
Sbjct: 237 -----AGRARARTGSPSSDVAAAAGRITLLALCWYPFETGL----------------RRE 275

Query: 203 ALRVNVVLSRKLERCFPAKCPL 224
           AL V  V++ ++  CF ++ PL
Sbjct: 276 ALEVPAVVNERIASCFFSRQPL 297


>gi|113427491 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 371

 Score = 37.0 bits (84), Expect = 0.054
 Identities = 41/128 (32%), Positives = 48/128 (37%), Gaps = 26/128 (20%)

Query: 481 PRPRPTRGDP-----PPSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRR 535
           P   P RGDP     PP+P+    AR  +   A R    R R L G          R   
Sbjct: 55  PAGEPRRGDPGVAPSPPAPEDS-DARGEDGAAAERRPEPRTRDLSGARGQTTGGEGREGA 113

Query: 536 RRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSV---RVHRC-----------RRL 581
           +    +  LP S+    RRP   A    +RP  PA  V   RV  C           RRL
Sbjct: 114 QTREGKMGLPDSA----RRP--RAPRTPLRPERPAPGVPGGRVAPCTCTSGSPSPRPRRL 167

Query: 582 EVGGHGSP 589
            V G GSP
Sbjct: 168 RVSGRGSP 175


>gi|239745902 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 371

 Score = 37.0 bits (84), Expect = 0.054
 Identities = 41/128 (32%), Positives = 48/128 (37%), Gaps = 26/128 (20%)

Query: 481 PRPRPTRGDP-----PPSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRR 535
           P   P RGDP     PP+P+    AR  +   A R    R R L G          R   
Sbjct: 55  PAGEPRRGDPGVAPSPPAPEDS-DARGEDGAAAERRPEPRTRDLSGARGQTTGGEGREGA 113

Query: 536 RRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSV---RVHRC-----------RRL 581
           +    +  LP S+    RRP   A    +RP  PA  V   RV  C           RRL
Sbjct: 114 QTREGKMGLPDSA----RRP--RAPRTPLRPERPAPGVPGGRVAPCTCTSGSPSPRPRRL 167

Query: 582 EVGGHGSP 589
            V G GSP
Sbjct: 168 RVSGRGSP 175


>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
          Length = 2303

 Score = 37.0 bits (84), Expect = 0.054
 Identities = 57/209 (27%), Positives = 73/209 (34%), Gaps = 50/209 (23%)

Query: 406  TPVSVLGRTSHYLRPQKCKHPPVFQCA-VNPGIRAVPAMDTALLPPLVFFASLSPAAGIR 464
            TP S   +TS   +P   K PPV Q A   PG  A P                 P    R
Sbjct: 1871 TPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPV----------------PKTPAR 1914

Query: 465  LGCSPSHLLGRDHLSRP-RPRPTRGDPPP----SPDTGFSARA-CERVPARRPAR----- 513
               +  H   R  +  P   RP R  PPP     P+ G   RA  E  P  R  R     
Sbjct: 1915 TLLAKQHKTQRSPVRIPFMQRPARRGPPPLARAVPEPGPRGRAGTEAGPGARGGRLGLVR 1974

Query: 514  ----------RRERALCGRCCSVV---VAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAW 560
                        +R+   R  + +     +RRRR   SS+ +   +  GA+ RR      
Sbjct: 1975 VASALSSGSESSDRSGFRRQLTFIKESPGLRRRRSELSSAESAASAPQGASPRRG----- 2029

Query: 561  EVSVRPSLPAVSVRVHRCRRLEVGGHGSP 589
                RP+LPAV +   RC  L       P
Sbjct: 2030 ----RPALPAVFLCSSRCEELRAAPRQGP 2054


>gi|239750652 PREDICTED: hypothetical protein XP_002347499 [Homo
           sapiens]
          Length = 166

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 37/121 (30%), Positives = 44/121 (36%), Gaps = 20/121 (16%)

Query: 485 PTRGDPP--PSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRT 542
           P    PP    P+ G SA      P +  A +  R    RCCSVV A   R   RSS+R 
Sbjct: 20  PAESAPPLQSHPENGVSA------PGKGTAAKGARGGQSRCCSVVAARLLRLTPRSSARR 73

Query: 543 RLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVHRCRRLEVGGHGSPGANGADMGLVERR 602
             P S  A      QG         LPA+S      R     G    GA   + G    R
Sbjct: 74  GRPESEPATNGTRQQG--------DLPALSAAAEAPRE----GGKEEGAGAREAGAARGR 121

Query: 603 S 603
           +
Sbjct: 122 A 122


>gi|239744960 PREDICTED: hypothetical protein XP_002343317 [Homo
           sapiens]
          Length = 166

 Score = 35.8 bits (81), Expect = 0.12
 Identities = 37/121 (30%), Positives = 44/121 (36%), Gaps = 20/121 (16%)

Query: 485 PTRGDPP--PSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRT 542
           P    PP    P+ G SA      P +  A +  R    RCCSVV A   R   RSS+R 
Sbjct: 20  PAESAPPLQSHPENGVSA------PGKGTAAKGARGGQSRCCSVVAARLLRLTPRSSARR 73

Query: 543 RLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVHRCRRLEVGGHGSPGANGADMGLVERR 602
             P S  A      QG         LPA+S      R     G    GA   + G    R
Sbjct: 74  GRPESEPATNGTRQQG--------DLPALSAAAEAPRE----GGKEEGAGAREAGAARGR 121

Query: 603 S 603
           +
Sbjct: 122 A 122


>gi|21735550 mitogen-activated protein kinase kinase kinase 10 [Homo
           sapiens]
          Length = 954

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 68/268 (25%), Positives = 95/268 (35%), Gaps = 44/268 (16%)

Query: 254 PPEQLCKALCSTKKDPRTWGAEGSTERVGATGVHRQLEEDADGKLPFVTPGACLGPEDHQ 313
           PP++  + L   KK  RTWG   + ++    G  R L+   +G   + +    LG     
Sbjct: 543 PPKK--EELVGGKKKGRTWGPSSTLQKERVGGEER-LKGLGEGSKQWSSSAPNLGKSPKH 599

Query: 314 IPKASGASEAEERQ--------GQWLPVSRDLAATTEAYLLVP-------------QPTG 352
            P A G +   E +        G  +P S     +T +YL VP             +PT 
Sbjct: 600 TPIAPGFASLNEMEEFAEAEDGGSSVPPS---PYSTPSYLSVPLPAEPSPGARAPWEPTP 656

Query: 353 GHTPGLWALPRT----LLLHGTCGQKNGYHLDHGVSRSRAALPGEERAPRKYLLGNNTPV 408
              P  W         L L G         L   V+ +RAA  GEE+  R++L G   P 
Sbjct: 657 SAPPARWGHGARRRCDLALLGCATLLGAVGLGADVAEARAA-DGEEQ--RRWLDGLFFPR 713

Query: 409 SVLGRTSHYLRPQKCKHPPVFQCAVNPGIRAVPAMDTALLPPLVFFASLSPAAGIRLGCS 468
           +  GR    L P    H    +  V PG+   P+        LV  +S+S     R    
Sbjct: 714 A--GRFPRGLSPPARPHGR--REDVGPGLGLAPSAT------LVSLSSVSDCNSTRSLLR 763

Query: 469 PSHLLGRDHLSRPRPRPTRGDPPPSPDT 496
                       P P P    P PSP T
Sbjct: 764 SDSDEAAPAAPSPPPSPPAPTPTPSPST 791


>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
          Length = 788

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 8/55 (14%)

Query: 37  PCSRRPVP--SSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQ 89
           P  R+P+   S S+LP+L + +PG Q ++P     + +PPPPQ P    G+P +Q
Sbjct: 416 PLGRQPMAQVSQSSLPMLSSPSPGQQVQTP-----QSMPPPPQ-PSPQPGQPSSQ 464


>gi|48526509 translocase of inner mitochondrial membrane 50 homolog
           [Homo sapiens]
          Length = 456

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 2/81 (2%)

Query: 66  GISTEPVPPP-PQCP-GCDCGEPIAQRLEEGDEAFRQSEYQKAAGLFRSTLARLAQPDRG 123
           G+S   V PP P+   GC  G   A+R   G  A+RQ +   +A +F    + L    RG
Sbjct: 65  GLSRASVHPPLPRVSIGCSSGPGRAKRERVGGAAWRQRKMAASAAVFSRLRSGLRLGSRG 124

Query: 124 QCLRLGNALARADRLPVALGA 144
            C RL     RA      +G+
Sbjct: 125 LCTRLATPPRRAPDQAAEIGS 145


>gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo
           sapiens]
          Length = 202

 Score = 34.7 bits (78), Expect = 0.27
 Identities = 35/102 (34%), Positives = 39/102 (38%), Gaps = 4/102 (3%)

Query: 42  PVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQRLEEGDEAFRQS 101
           P P+ S  PL  A  PG   R P G +  P  PP   P     +P A R E       QS
Sbjct: 92  PRPTRSPAPL--ARRPGKPPRRPKGAAGHPSAPPAAAPAAP-AQPPAPRPESQLSDRPQS 148

Query: 102 EYQKAAGLFRST-LARLAQPDRGQCLRLGNALARADRLPVAL 142
             QK  G  RS   A  A P  G   +   A  R  R   AL
Sbjct: 149 WEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAAL 190


>gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo
           sapiens]
          Length = 202

 Score = 34.7 bits (78), Expect = 0.27
 Identities = 35/102 (34%), Positives = 39/102 (38%), Gaps = 4/102 (3%)

Query: 42  PVPSSSALPLLHAFAPGPQGRSPAGISTEPVPPPPQCPGCDCGEPIAQRLEEGDEAFRQS 101
           P P+ S  PL  A  PG   R P G +  P  PP   P     +P A R E       QS
Sbjct: 92  PRPTRSPAPL--ARRPGKPPRRPKGAAGHPSAPPAAAPAAP-AQPPAPRPESQLSDRPQS 148

Query: 102 EYQKAAGLFRST-LARLAQPDRGQCLRLGNALARADRLPVAL 142
             QK  G  RS   A  A P  G   +   A  R  R   AL
Sbjct: 149 WEQKPRGPGRSARSAGAAAPPAGGLAQARQARRRRPRAAAAL 190


>gi|87298836 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Homo
           sapiens]
          Length = 315

 Score = 34.7 bits (78), Expect = 0.27
 Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 18/112 (16%)

Query: 457 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPT-----------RGDPPPSPDTGFSARACER 505
           L+PA   R     S   G +H  R  P+ T           R + P S      A A ER
Sbjct: 199 LAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSASQA-KASAPER 257

Query: 506 VPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQ 557
            P+  P R++    C RC    + +        +  + LP   G  L  PW+
Sbjct: 258 TPSPAPKRKKRAKSCSRCLHTALHI------AEAPGSLLPGGKGRCLSSPWK 303


>gi|23200002 NOL1/NOP2/Sun domain family, member 5C isoform 2 [Homo
           sapiens]
          Length = 291

 Score = 34.7 bits (78), Expect = 0.27
 Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 18/112 (16%)

Query: 457 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPT-----------RGDPPPSPDTGFSARACER 505
           L+PA   R     S   G +H  R  P+ T           R + P S      A A ER
Sbjct: 175 LAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSASQA-KASAPER 233

Query: 506 VPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQ 557
            P+  P R++    C RC    + +        +  + LP   G  L  PW+
Sbjct: 234 TPSPAPKRKKRAKSCSRCLHTALHI------AEAPGSLLPGGKGRCLSSPWK 279


>gi|23200000 NOL1/NOP2/Sun domain family, member 5C isoform 1 [Homo
           sapiens]
          Length = 315

 Score = 34.7 bits (78), Expect = 0.27
 Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 18/112 (16%)

Query: 457 LSPAAGIRLGCSPSHLLGRDHLSRPRPRPT-----------RGDPPPSPDTGFSARACER 505
           L+PA   R     S   G +H  R  P+ T           R + P S      A A ER
Sbjct: 199 LAPALPARPHRGLSTFPGAEHCLRASPKTTLSGGFFVAVIERVEMPTSASQA-KASAPER 257

Query: 506 VPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQ 557
            P+  P R++    C RC    + +        +  + LP   G  L  PW+
Sbjct: 258 TPSPAPKRKKRAKSCSRCLHTALHI------AEAPGSLLPGGKGRCLSSPWK 303


>gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 231

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 22/81 (27%)

Query: 478 LSRPRPRPTRGDPPPSPDTGFSARACERVP---------ARRPARRRERALCGRCCSVVV 528
           LS PRP      PPP P      R+  R P         +R  +RRR R+L         
Sbjct: 6   LSLPRPSSPLSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSL--------- 56

Query: 529 AVRRRRRRRSSSRTRLPSSSG 549
              R  RRRS SR+R P SSG
Sbjct: 57  ---RWLRRRSRSRSR-PFSSG 73



 Score = 30.8 bits (68), Expect = 3.8
 Identities = 44/159 (27%), Positives = 58/159 (36%), Gaps = 17/159 (10%)

Query: 32  VRRLWPCSRRPVPSSSALPLLHAFAPGPQ--GRSPAGISTEPVPPPPQCPGCDCGEPIAQ 89
           +RR      RP  S  + P   +   GP   G SPA   +   PPPP+          A+
Sbjct: 59  LRRRSRSRSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRAR 118

Query: 90  RLEEGDEAFRQSEYQKAAGL--FRSTLARLAQPDRGQCLRLGNALARADRLPVALGAFCV 147
                   FR         L   RS+L+RL +       RL  +  R  R   +L     
Sbjct: 119 SRLRLLRRFRSRSLSLLRSLERLRSSLSRLRE-------RLRRSRERERRRSRSLS---- 167

Query: 148 ALRLEALRPEELGELAELAGGLVCPGLRE--RPLFTGKP 184
             RL +LR         L G    PGL E  RP++ G P
Sbjct: 168 RSRLRSLRSRSRSRSRSLCGSGEGPGLDEVGRPVWLGSP 206


>gi|239756120 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 170

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 31/90 (34%), Positives = 36/90 (40%), Gaps = 16/90 (17%)

Query: 485 PTRGDPP--PSPDTGFSARACERVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRT 542
           P    PP    P+ G SA      P +  A +  R    RCCSVV A   R   RSS+R 
Sbjct: 20  PAESAPPLQSHPENGVSA------PGKGTAAKGARGGQSRCCSVVAARLLRLTPRSSARR 73

Query: 543 RLPSSSGAALRRPWQGAWEVSVRPSLPAVS 572
             P S  A      QG         LPA+S
Sbjct: 74  GRPESEPATNGTRQQG--------DLPALS 95


>gi|239751841 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 231

 Score = 33.9 bits (76), Expect = 0.45
 Identities = 30/81 (37%), Positives = 35/81 (43%), Gaps = 22/81 (27%)

Query: 478 LSRPRPRPTRGDPPPSPDTGFSARACERVP---------ARRPARRRERALCGRCCSVVV 528
           LS PRP      PPP P      R+  R P         +R  +RRR R+L         
Sbjct: 6   LSLPRPSSPLSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSL--------- 56

Query: 529 AVRRRRRRRSSSRTRLPSSSG 549
              R  RRRS SR+R P SSG
Sbjct: 57  ---RWLRRRSRSRSR-PFSSG 73



 Score = 30.8 bits (68), Expect = 3.8
 Identities = 44/159 (27%), Positives = 58/159 (36%), Gaps = 17/159 (10%)

Query: 32  VRRLWPCSRRPVPSSSALPLLHAFAPGPQ--GRSPAGISTEPVPPPPQCPGCDCGEPIAQ 89
           +RR      RP  S  + P   +   GP   G SPA   +   PPPP+          A+
Sbjct: 59  LRRRSRSRSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRAR 118

Query: 90  RLEEGDEAFRQSEYQKAAGL--FRSTLARLAQPDRGQCLRLGNALARADRLPVALGAFCV 147
                   FR         L   RS+L+RL +       RL  +  R  R   +L     
Sbjct: 119 SRLRLLRRFRSRSLSLLRSLERLRSSLSRLRE-------RLRRSRERERRRSRSLS---- 167

Query: 148 ALRLEALRPEELGELAELAGGLVCPGLRE--RPLFTGKP 184
             RL +LR         L G    PGL E  RP++ G P
Sbjct: 168 RSRLRSLRSRSRSRSRSLCGSGEGPGLDEVGRPVWLGSP 206


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,405,046
Number of Sequences: 37866
Number of extensions: 1786838
Number of successful extensions: 8780
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 8496
Number of HSP's gapped (non-prelim): 434
length of query: 616
length of database: 18,247,518
effective HSP length: 108
effective length of query: 508
effective length of database: 14,157,990
effective search space: 7192258920
effective search space used: 7192258920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.