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Search of human proteins with 239745179
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745179 PREDICTED: hypothetical protein XP_002343382 [Homo
sapiens]
(156 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745179 PREDICTED: hypothetical protein XP_002343382 [Homo ... 317 3e-87
gi|239756266 PREDICTED: hypothetical protein XP_002344876 [Homo ... 315 8e-87
gi|239750817 PREDICTED: hypothetical protein XP_002347570 [Homo ... 315 8e-87
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 40 8e-04
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 40 8e-04
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 40 8e-04
gi|4507831 Unc-51-like kinase 1 [Homo sapiens] 38 0.004
gi|60498992 forkhead box P4 isoform 3 [Homo sapiens] 37 0.009
gi|29789367 forkhead box P4 isoform 2 [Homo sapiens] 37 0.009
gi|60498989 forkhead box P4 isoform 1 [Homo sapiens] 37 0.009
gi|62988361 absent in melanoma 1 [Homo sapiens] 36 0.015
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 35 0.026
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 35 0.026
gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens] 35 0.034
gi|4506975 solute carrier family 12 (sodium/potassium/chloride t... 34 0.044
gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens] 34 0.044
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 34 0.044
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 34 0.057
gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] 33 0.075
gi|38176151 Lunapark [Homo sapiens] 33 0.075
gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens] 33 0.075
gi|157426856 armadillo repeat containing 5 isoform a [Homo sapiens] 33 0.075
gi|169168202 PREDICTED: hypothetical protein [Homo sapiens] 33 0.098
gi|169167967 PREDICTED: hypothetical protein [Homo sapiens] 33 0.098
gi|169167681 PREDICTED: hypothetical protein [Homo sapiens] 33 0.098
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 33 0.13
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 33 0.13
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 33 0.13
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 32 0.17
gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo ... 32 0.17
>gi|239745179 PREDICTED: hypothetical protein XP_002343382 [Homo
sapiens]
Length = 156
Score = 317 bits (812), Expect = 3e-87
Identities = 156/156 (100%), Positives = 156/156 (100%)
Query: 1 MQRGRAVPSVGDSGRKRGRDAGGTEARGARKEAHSLSLLQNISRLNSSVVSWASPTSHPA 60
MQRGRAVPSVGDSGRKRGRDAGGTEARGARKEAHSLSLLQNISRLNSSVVSWASPTSHPA
Sbjct: 1 MQRGRAVPSVGDSGRKRGRDAGGTEARGARKEAHSLSLLQNISRLNSSVVSWASPTSHPA 60
Query: 61 LEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLPEPHCDSRST 120
LEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLPEPHCDSRST
Sbjct: 61 LEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLPEPHCDSRST 120
Query: 121 SGPQRQGLVSVNKPTPNEQLLPKAHPPILALHLLLG 156
SGPQRQGLVSVNKPTPNEQLLPKAHPPILALHLLLG
Sbjct: 121 SGPQRQGLVSVNKPTPNEQLLPKAHPPILALHLLLG 156
>gi|239756266 PREDICTED: hypothetical protein XP_002344876 [Homo
sapiens]
Length = 156
Score = 315 bits (808), Expect = 8e-87
Identities = 155/156 (99%), Positives = 156/156 (100%)
Query: 1 MQRGRAVPSVGDSGRKRGRDAGGTEARGARKEAHSLSLLQNISRLNSSVVSWASPTSHPA 60
MQRGRAVPSVGDSGRKRGRDAGG+EARGARKEAHSLSLLQNISRLNSSVVSWASPTSHPA
Sbjct: 1 MQRGRAVPSVGDSGRKRGRDAGGSEARGARKEAHSLSLLQNISRLNSSVVSWASPTSHPA 60
Query: 61 LEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLPEPHCDSRST 120
LEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLPEPHCDSRST
Sbjct: 61 LEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLPEPHCDSRST 120
Query: 121 SGPQRQGLVSVNKPTPNEQLLPKAHPPILALHLLLG 156
SGPQRQGLVSVNKPTPNEQLLPKAHPPILALHLLLG
Sbjct: 121 SGPQRQGLVSVNKPTPNEQLLPKAHPPILALHLLLG 156
>gi|239750817 PREDICTED: hypothetical protein XP_002347570 [Homo
sapiens]
Length = 156
Score = 315 bits (808), Expect = 8e-87
Identities = 155/156 (99%), Positives = 156/156 (100%)
Query: 1 MQRGRAVPSVGDSGRKRGRDAGGTEARGARKEAHSLSLLQNISRLNSSVVSWASPTSHPA 60
MQRGRAVPSVGDSGRKRGRDAGG+EARGARKEAHSLSLLQNISRLNSSVVSWASPTSHPA
Sbjct: 1 MQRGRAVPSVGDSGRKRGRDAGGSEARGARKEAHSLSLLQNISRLNSSVVSWASPTSHPA 60
Query: 61 LEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLPEPHCDSRST 120
LEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLPEPHCDSRST
Sbjct: 61 LEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLPEPHCDSRST 120
Query: 121 SGPQRQGLVSVNKPTPNEQLLPKAHPPILALHLLLG 156
SGPQRQGLVSVNKPTPNEQLLPKAHPPILALHLLLG
Sbjct: 121 SGPQRQGLVSVNKPTPNEQLLPKAHPPILALHLLLG 156
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 40.0 bits (92), Expect = 8e-04
Identities = 41/152 (26%), Positives = 55/152 (36%), Gaps = 18/152 (11%)
Query: 11 GDSGRKRG-RDAGGTEARGARKEAHSLSLL-----QNISRLNSSVVSWASPTSHPALEA- 63
G+S R D G ++ + ++ S S N S +SS PAL+A
Sbjct: 131 GESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAP 190
Query: 64 -GATAAP---PPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLPEPHCDSRS 119
G T AP PP P P SP+ S A + P P+P H
Sbjct: 191 TGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAP 250
Query: 120 TSGPQRQGLVSVNKPTPNEQLLPKAHPPILAL 151
PQR P+P+ P HPP+ L
Sbjct: 251 ALHPQR-------PPSPHPPPHPSPHPPLQPL 275
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 40.0 bits (92), Expect = 8e-04
Identities = 41/152 (26%), Positives = 55/152 (36%), Gaps = 18/152 (11%)
Query: 11 GDSGRKRG-RDAGGTEARGARKEAHSLSLL-----QNISRLNSSVVSWASPTSHPALEA- 63
G+S R D G ++ + ++ S S N S +SS PAL+A
Sbjct: 685 GESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAP 744
Query: 64 -GATAAP---PPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLPEPHCDSRS 119
G T AP PP P P SP+ S A + P P+P H
Sbjct: 745 TGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAP 804
Query: 120 TSGPQRQGLVSVNKPTPNEQLLPKAHPPILAL 151
PQR P+P+ P HPP+ L
Sbjct: 805 ALHPQR-------PPSPHPPPHPSPHPPLQPL 829
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 40.0 bits (92), Expect = 8e-04
Identities = 41/152 (26%), Positives = 55/152 (36%), Gaps = 18/152 (11%)
Query: 11 GDSGRKRG-RDAGGTEARGARKEAHSLSLL-----QNISRLNSSVVSWASPTSHPALEA- 63
G+S R D G ++ + ++ S S N S +SS PAL+A
Sbjct: 685 GESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAP 744
Query: 64 -GATAAP---PPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLPEPHCDSRS 119
G T AP PP P P SP+ S A + P P+P H
Sbjct: 745 TGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAP 804
Query: 120 TSGPQRQGLVSVNKPTPNEQLLPKAHPPILAL 151
PQR P+P+ P HPP+ L
Sbjct: 805 ALHPQR-------PPSPHPPPHPSPHPPLQPL 829
>gi|4507831 Unc-51-like kinase 1 [Homo sapiens]
Length = 1050
Score = 37.7 bits (86), Expect = 0.004
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 15/107 (14%)
Query: 58 HPALEAGATAAPPP---SAGAAPK-AKPGWGLRLQVQLRSPSQSLAEGRKH--------- 104
HP AG T++P P + G+ P + P G R ++ P+ S + +H
Sbjct: 738 HPGARAGGTSSPSPVVFTVGSPPSGSTPPQGPRTRMFSAGPTGSASSSARHLVPGPCSEA 797
Query: 105 -RPPLPLPEPHCDSRSTSGPQRQGLVSVNKP-TPNEQLLPKAHPPIL 149
P LP P C +G V+ P P E L+ + H IL
Sbjct: 798 PAPELPAPGHGCSFADPIAANLEGAVTFEAPDLPEETLMEQEHTEIL 844
>gi|60498992 forkhead box P4 isoform 3 [Homo sapiens]
Length = 678
Score = 36.6 bits (83), Expect = 0.009
Identities = 34/108 (31%), Positives = 45/108 (41%), Gaps = 12/108 (11%)
Query: 35 SLSLLQNISRLNSSVVSWASPTSHPALEAGATAAPPPSAGAA--PKAKPGWGLRLQVQLR 92
S LL + LN S P SH + GA P PS G++ P+ P QVQ++
Sbjct: 580 SFPLLNSPGMLNPGSASSLLPLSHD--DVGAPVEPLPSNGSSSPPRLSPPQYSH-QVQVK 636
Query: 93 SPSQSLAEGRKHRPPLPLPEPHCDSRSTSGPQRQGLVSVNKPTPNEQL 140
E R+ PPL P P S SGP + + P E+L
Sbjct: 637 EEPAEAEEDRQPGPPLGAPNP-----SASGPPEDR--DLEEELPGEEL 677
>gi|29789367 forkhead box P4 isoform 2 [Homo sapiens]
Length = 667
Score = 36.6 bits (83), Expect = 0.009
Identities = 34/108 (31%), Positives = 45/108 (41%), Gaps = 12/108 (11%)
Query: 35 SLSLLQNISRLNSSVVSWASPTSHPALEAGATAAPPPSAGAA--PKAKPGWGLRLQVQLR 92
S LL + LN S P SH + GA P PS G++ P+ P QVQ++
Sbjct: 569 SFPLLNSPGMLNPGSASSLLPLSHD--DVGAPVEPLPSNGSSSPPRLSPPQYSH-QVQVK 625
Query: 93 SPSQSLAEGRKHRPPLPLPEPHCDSRSTSGPQRQGLVSVNKPTPNEQL 140
E R+ PPL P P S SGP + + P E+L
Sbjct: 626 EEPAEAEEDRQPGPPLGAPNP-----SASGPPEDR--DLEEELPGEEL 666
>gi|60498989 forkhead box P4 isoform 1 [Homo sapiens]
Length = 680
Score = 36.6 bits (83), Expect = 0.009
Identities = 34/108 (31%), Positives = 45/108 (41%), Gaps = 12/108 (11%)
Query: 35 SLSLLQNISRLNSSVVSWASPTSHPALEAGATAAPPPSAGAA--PKAKPGWGLRLQVQLR 92
S LL + LN S P SH + GA P PS G++ P+ P QVQ++
Sbjct: 582 SFPLLNSPGMLNPGSASSLLPLSHD--DVGAPVEPLPSNGSSSPPRLSPPQYSH-QVQVK 638
Query: 93 SPSQSLAEGRKHRPPLPLPEPHCDSRSTSGPQRQGLVSVNKPTPNEQL 140
E R+ PPL P P S SGP + + P E+L
Sbjct: 639 EEPAEAEEDRQPGPPLGAPNP-----SASGPPEDR--DLEEELPGEEL 679
>gi|62988361 absent in melanoma 1 [Homo sapiens]
Length = 1723
Score = 35.8 bits (81), Expect = 0.015
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 13/113 (11%)
Query: 45 LNSSVVSWASPTSHPAL--------EAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQ 96
L+ V S ASP S P+ E+ + PPP++ +P + G L+ P+
Sbjct: 66 LDGGVASAASPESKPSPGTKGQLRGESDRSKQPPPAS--SPTKRKGRSRALEAVPAPPAS 123
Query: 97 SLAEGRKHRPPLPLPEPHCDSRST---SGPQRQGLVSVNKPTPNEQLLPKAHP 146
K PP +P+P ++ T SG + + P + LLP+ P
Sbjct: 124 GPRAPAKESPPKRVPDPSPVTKGTAAESGEEAARAIPRELPVKSSSLLPEIKP 176
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 35.0 bits (79), Expect = 0.026
Identities = 29/94 (30%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Query: 56 TSHPALEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLP-EPH 114
+S P+L G +PPP P L V + SPS SL G PP PLP
Sbjct: 619 SSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPS-SLPGGTAIPPPPPLPGSAR 677
Query: 115 CDSRSTSGPQRQGLVSVNKPTPNEQLLPKAHPPI 148
P G+ P P E +P PP+
Sbjct: 678 IPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPL 711
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 35.0 bits (79), Expect = 0.026
Identities = 29/94 (30%), Positives = 36/94 (38%), Gaps = 2/94 (2%)
Query: 56 TSHPALEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLP-EPH 114
+S P+L G +PPP P L V + SPS SL G PP PLP
Sbjct: 628 SSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPS-SLPGGTAIPPPPPLPGSAR 686
Query: 115 CDSRSTSGPQRQGLVSVNKPTPNEQLLPKAHPPI 148
P G+ P P E +P PP+
Sbjct: 687 IPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPL 720
>gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens]
Length = 636
Score = 34.7 bits (78), Expect = 0.034
Identities = 36/144 (25%), Positives = 53/144 (36%), Gaps = 10/144 (6%)
Query: 22 GGTEARGARKEAHSLSLLQNISRLNSSVVSWASPTSH-----PALEAGATAAPPPSAGAA 76
GG + A EA +L SR + P H P+ G A PPP+ GAA
Sbjct: 45 GGGGSLAAAAEAQRENLSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPPPAGGAA 104
Query: 77 PKAKPG---WGLRLQVQLRSPSQSLAEGRKHRPPLPLPEPHCDSRSTSGPQR--QGLVSV 131
G G V+ QSL EG + L EP + + P+ + +
Sbjct: 105 NNHGAGSGAGGRAAPVESSQEEQSLCEGSNSAVSMELSEPIENGETEMSPEESWEHKEEI 164
Query: 132 NKPTPNEQLLPKAHPPILALHLLL 155
++ P L PP + H ++
Sbjct: 165 SEAEPGGGSLGDGRPPEESAHEMM 188
>gi|4506975 solute carrier family 12 (sodium/potassium/chloride
transporters), member 2 [Homo sapiens]
Length = 1212
Score = 34.3 bits (77), Expect = 0.044
Identities = 27/85 (31%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Query: 4 GRAVPSVGDSGRKRGRDAGGTEARGARKEAHSLSL----LQNISRLNSSVVSWASPTSHP 59
G AVPSV + RD GG G L + SR +VS + +
Sbjct: 36 GTAVPSVPEDAAPASRDGGGVRDEGPAAAGDGLGRPLGPTPSQSRFQVDLVSENAGRAAA 95
Query: 60 ALEAGATAAPPPSAGAAPKAKPGWG 84
A A A AA AGA K P G
Sbjct: 96 AAAAAAAAAAAAGAGAGAKQTPADG 120
>gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens]
Length = 397
Score = 34.3 bits (77), Expect = 0.044
Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 18/110 (16%)
Query: 51 SWASPTSHPALEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPL 110
S A T P+ +A ++P P A + + WG Q Q P SL R+ P+P
Sbjct: 216 SEAPSTQDPSTQASTASSPAPEENAPSEGQRVWG---QGQSPRPENSLE--REEMGPVP- 269
Query: 111 PEPHCDSRSTSGPQRQGLVSV----------NKPTPNEQLLPKAHPPILA 150
H D+ GP VSV +P + PKA PI A
Sbjct: 270 --AHTDAFQDWGPGSMAHVSVVPVSSEGTPSREPVASGSWTPKAEEPIHA 317
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 34.3 bits (77), Expect = 0.044
Identities = 38/128 (29%), Positives = 49/128 (38%), Gaps = 13/128 (10%)
Query: 2 QRGRAVPSVGDSGRKRGRDAGGTEARGARKEAHSLSLLQNISRLNSSVVSWASPTSHPAL 61
+R RA G GR G AR A + SLL S + S P +P
Sbjct: 395 ERPRAAGRRGRMAEASGR-RGSPRARKASRSQSETSLLGRASAVPSG------PPKYPTA 447
Query: 62 EAGATAAPPPSAGAAP--KAKPGWGLRLQVQLRSPSQ-SLAEGRKHRPPLPLPEPHCDSR 118
E P P G AP A+ R + RS ++ A+GR+ RP P
Sbjct: 448 EREEPRPPRPRRGPAPTLAAQAAGSCR---RWRSTAEIDAADGRRVRPRAPAARVPGPGP 504
Query: 119 STSGPQRQ 126
S S PQR+
Sbjct: 505 SPSAPQRR 512
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 33.9 bits (76), Expect = 0.057
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 12/122 (9%)
Query: 8 PSVGDSGRKRGRDAGGTEARGARKEAHSLSLLQNISRLNSSVVSWASPTSHPA-LEAGAT 66
P+ R+ + + + + + S S + S +SS S +S +S P+ + G
Sbjct: 2598 PTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQ 2657
Query: 67 AAPPPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGR-------KHRPPLPLPEPHCDSRS 119
A P P A+PK KP G R R P SL + R + R P P P P S
Sbjct: 2658 ALPKP---ASPK-KPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSS 2713
Query: 120 TS 121
+S
Sbjct: 2714 SS 2715
Score = 28.1 bits (61), Expect = 3.2
Identities = 31/112 (27%), Positives = 40/112 (35%), Gaps = 20/112 (17%)
Query: 16 KRGRDAGGTEARGARKEAHSLSLLQNISRLNSSVVSWASPTSHPALEAGATAAPPPSAGA 75
KRGR + +R K HS S R S A G + +P +
Sbjct: 491 KRGR----SRSRTPTKRGHSRSRSPQWRR------------SRSAQRWGRSRSPQRRGRS 534
Query: 76 APKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLPEPHCDSRSTSGPQRQG 127
+PGW Q R S+S GR H P SRS + P R+G
Sbjct: 535 RSPQRPGWSRSRNTQRRGRSRSARRGRSHSRS---PATRGRSRSRT-PARRG 582
>gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens]
Length = 637
Score = 33.5 bits (75), Expect = 0.075
Identities = 37/145 (25%), Positives = 54/145 (37%), Gaps = 11/145 (7%)
Query: 22 GGTEARGARKEAHSLSLLQNISRLNSSVVSWASPTSH-----PALEAGATAAPPPSAGAA 76
GG + A EA +L SR + P H P+ G A PPP+ GAA
Sbjct: 45 GGGGSLAAAAEAQRENLSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAAPPPPAGGAA 104
Query: 77 PKAKPG---WGLRLQVQLRSPSQSLAEGRKHRPPLPLPEPHCDSRSTS-GPQR--QGLVS 130
G G V+ QSL EG + L EP ++ T P+ +
Sbjct: 105 NNHGAGSGAGGRAAPVESSQEEQSLCEGSNSAVSMELSEPIVENGETEMSPEESWEHKEE 164
Query: 131 VNKPTPNEQLLPKAHPPILALHLLL 155
+++ P L PP + H ++
Sbjct: 165 ISEAEPGGGSLGDGRPPEESAHEMM 189
>gi|38176151 Lunapark [Homo sapiens]
Length = 428
Score = 33.5 bits (75), Expect = 0.075
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 65 ATAAPPPSAGAAPKAKPGWGLRLQVQL-RSPSQSLAEGRKHRPP-LPL-PEPHCDSRSTS 121
A PPSAGAA A+PG +R + R+ S + A + PP +P+ P P DS +
Sbjct: 146 AKECEPPSAGAAVTARPGQEIRQRTAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPG 205
Query: 122 GPQRQGLVSVNKPTPNEQLLPK 143
GP + + P + +LP+
Sbjct: 206 GPPERTVT----PALSSNVLPR 223
>gi|28875784 armadillo repeat containing 5 isoform b [Homo sapiens]
Length = 725
Score = 33.5 bits (75), Expect = 0.075
Identities = 21/59 (35%), Positives = 27/59 (45%)
Query: 21 AGGTEARGARKEAHSLSLLQNISRLNSSVVSWASPTSHPALEAGATAAPPPSAGAAPKA 79
AGG E AR L L + S S A P S P+ A ++P P++G AP A
Sbjct: 55 AGGIERFRARGGLRPLLALLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSA 113
>gi|157426856 armadillo repeat containing 5 isoform a [Homo sapiens]
Length = 935
Score = 33.5 bits (75), Expect = 0.075
Identities = 21/59 (35%), Positives = 27/59 (45%)
Query: 21 AGGTEARGARKEAHSLSLLQNISRLNSSVVSWASPTSHPALEAGATAAPPPSAGAAPKA 79
AGG E AR L L + S S A P S P+ A ++P P++G AP A
Sbjct: 55 AGGIERFRARGGLRPLLALLRRAAAAGSAPSQAGPGSAPSSAASGASSPAPASGPAPSA 113
>gi|169168202 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 33.1 bits (74), Expect = 0.098
Identities = 43/158 (27%), Positives = 57/158 (36%), Gaps = 28/158 (17%)
Query: 3 RGRAVPSVGDSGRKRGRDAG---GTEA----------RGARKEAHSLSLLQNISRL---- 45
R RA P GD G +R R A GT++ R A L +SRL
Sbjct: 60 RARAAPQQGDGGARRERAAAESLGTQSATLGPRRGGLRSRTDPAFGAGPLPLVSRLGHAG 119
Query: 46 --------NSSVVSWASPTSHPALEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQS 97
+ + VS +SP P T PP +AP+ PG G R + +
Sbjct: 120 ERGSPGAGDVNPVSASSPPGRPDPLLLTTFVFPPGKTSAPRPSPG-GRRGRPLGAARGTG 178
Query: 98 LAEGRKHRPPLPLPEPHCDSRSTSGPQRQGLVSVNKPT 135
L G P L P H +R T R G + P+
Sbjct: 179 LNPGLS--PRLQEPRGHQSARRTDTASRAGWATRRAPS 214
Score = 30.0 bits (66), Expect = 0.83
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 21 AGGTEARGARKEAHSLSLLQNISRLNSSVVSWASPT---SHPALEAGATAAPPPSAGAAP 77
AGG E G +E L ++ ++ S SWA P HPA+ A + APP A AA
Sbjct: 267 AGGVEPPGWSRERAGAGLSRDSPQVPRSG-SWARPCREQGHPAVLALQSPAPPSLARAAA 325
Query: 78 KAK-PG 82
+ + PG
Sbjct: 326 RRRGPG 331
>gi|169167967 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 33.1 bits (74), Expect = 0.098
Identities = 43/158 (27%), Positives = 57/158 (36%), Gaps = 28/158 (17%)
Query: 3 RGRAVPSVGDSGRKRGRDAG---GTEA----------RGARKEAHSLSLLQNISRL---- 45
R RA P GD G +R R A GT++ R A L +SRL
Sbjct: 60 RARAAPQQGDGGARRERAAAESLGTQSATLGPRRGGLRSRTDPAFGAGPLPLVSRLGHAG 119
Query: 46 --------NSSVVSWASPTSHPALEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQS 97
+ + VS +SP P T PP +AP+ PG G R + +
Sbjct: 120 ERGSPGAGDVNPVSASSPPGRPDPLLLTTFVFPPGKTSAPRPSPG-GRRGRPLGAARGTG 178
Query: 98 LAEGRKHRPPLPLPEPHCDSRSTSGPQRQGLVSVNKPT 135
L G P L P H +R T R G + P+
Sbjct: 179 LNPGLS--PRLQEPRGHQSARRTDTASRAGWATRRAPS 214
Score = 31.6 bits (70), Expect = 0.29
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 2 QRGRAVPSVGDSGR-KRGRD---AGGTEARGARKEAHSLSLLQNISRLNSSVVSWASPT- 56
QR V D+GR R R AGG E G +E L ++ ++ S SWA P
Sbjct: 244 QRAAGAERVLDNGRGPRSRLPGLAGGVEPPGWSRERAGAGLSRDSPQVPRSG-SWARPCR 302
Query: 57 --SHPALEAGATAAPPPSAGAAPKAK-PG 82
HPA+ A + APP A AA + + PG
Sbjct: 303 EQGHPAVLALQSPAPPSLARAAARRRGPG 331
>gi|169167681 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 33.1 bits (74), Expect = 0.098
Identities = 43/158 (27%), Positives = 57/158 (36%), Gaps = 28/158 (17%)
Query: 3 RGRAVPSVGDSGRKRGRDAG---GTEA----------RGARKEAHSLSLLQNISRL---- 45
R RA P GD G +R R A GT++ R A L +SRL
Sbjct: 60 RARAAPQQGDGGARRERAAAESLGTQSATLGPRRGGLRSRTDPAFGAGPLPLVSRLGHAG 119
Query: 46 --------NSSVVSWASPTSHPALEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQS 97
+ + VS +SP P T PP +AP+ PG G R + +
Sbjct: 120 ERGSPGAGDVNPVSASSPPGRPDPLLLTTFVFPPGKTSAPRPSPG-GRRGRPLGAARGTG 178
Query: 98 LAEGRKHRPPLPLPEPHCDSRSTSGPQRQGLVSVNKPT 135
L G P L P H +R T R G + P+
Sbjct: 179 LNPGLS--PRLQEPRGHQSARRTDTASRAGWATRRAPS 214
Score = 31.6 bits (70), Expect = 0.29
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 2 QRGRAVPSVGDSGR-KRGRD---AGGTEARGARKEAHSLSLLQNISRLNSSVVSWASPT- 56
QR V D+GR R R AGG E G +E L ++ ++ S SWA P
Sbjct: 244 QRAAGAERVLDNGRGPRSRLPGLAGGVEPPGWSRERAGAGLSRDSPQVPRSG-SWARPCR 302
Query: 57 --SHPALEAGATAAPPPSAGAAPKAK-PG 82
HPA+ A + APP A AA + + PG
Sbjct: 303 EQGHPAVLALQSPAPPSLARAAARRRGPG 331
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 32.7 bits (73), Expect = 0.13
Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 18/99 (18%)
Query: 15 RKRGRDAGGTEARGARKEAHSLSLLQNISRLNSSVVSWASPTSHPALEAGATAAPPPSAG 74
R+ GR G ++GA I R S S PA AG A P P+A
Sbjct: 816 RESGRRRAGATSQGA------------IRRAASRARKGESRRPLPANSAGRPALPSPAA- 862
Query: 75 AAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLPEP 113
A A+ WGLR PS++ G + P P P
Sbjct: 863 -ARSARGSWGLRAS----RPSRAAPRGPPNFQRCPAPRP 896
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 32.7 bits (73), Expect = 0.13
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 5/112 (4%)
Query: 48 SVVSWASPTSHPALEAGATAAPPPSAGAAPKAKPGWGLRL----QVQLRSPSQSLAEGRK 103
S+ S A+P S PA +G +A P A A P GL+ QV + A G
Sbjct: 232 SLSSSATPLSSPA-RSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPL 290
Query: 104 HRPPLPLPEPHCDSRSTSGPQRQGLVSVNKPTPNEQLLPKAHPPILALHLLL 155
PL P P ++ P Q L S P++ P + A H L
Sbjct: 291 SSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFL 342
Score = 28.5 bits (62), Expect = 2.4
Identities = 22/71 (30%), Positives = 26/71 (36%), Gaps = 15/71 (21%)
Query: 62 EAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLP--------EP 113
E GA A+PPP A A W R P+ LA PLP P +
Sbjct: 611 EGGAAASPPPDAELAACHPAAWS-------RGPAPPLAFRGAPGAPLPWPPATGPGSADG 663
Query: 114 HCDSRSTSGPQ 124
C T GP+
Sbjct: 664 LCTIYETEGPE 674
Score = 26.6 bits (57), Expect = 9.2
Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 7/116 (6%)
Query: 11 GDSGRKRGR-DAGGTEARGARKEAHSLSLLQNISRLNSSVVSWASPTSHPALEAGATAAP 69
G G+K R A T ARG EA S L +R ++S + +P+ A + A
Sbjct: 118 GPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTE 177
Query: 70 PPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLPEPHCDSRSTSGPQR 125
AP A+P + P +S++ +H P P + G QR
Sbjct: 178 VGLPRPAPSARP------RPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQR 227
>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
Length = 845
Score = 32.7 bits (73), Expect = 0.13
Identities = 22/81 (27%), Positives = 28/81 (34%)
Query: 51 SWASPTSHPALEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPL 110
S + TSH G A P AG + PG G Q +P A+ + P+
Sbjct: 585 SMGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTSTSHQPTTPGGGTAQTPEPGTSQPM 644
Query: 111 PEPHCDSRSTSGPQRQGLVSV 131
P S GP SV
Sbjct: 645 PLSKSTPSSGGGPSEDKRFSV 665
Score = 27.7 bits (60), Expect = 4.1
Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 56 TSHPALEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLPEPHC 115
TSH G A P G + PG G Q +PS A+ + P+P P
Sbjct: 528 TSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATPSGGTAQTPEPGTSQPMP-PSM 586
Query: 116 DSRSTSGPQRQG 127
+ ++ P G
Sbjct: 587 GTSTSHQPATPG 598
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 32.3 bits (72), Expect = 0.17
Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Query: 54 SPTSHPALEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLPEP 113
S HP A PP +P + G G PSQ + G + RP P P P
Sbjct: 70 SGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQS-GSRLRPAAPGPRP 128
Query: 114 HCDSRSTS 121
C S S
Sbjct: 129 GCSSARAS 136
>gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo
sapiens]
Length = 209
Score = 32.3 bits (72), Expect = 0.17
Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Query: 54 SPTSHPALEAGATAAPPPSAGAAPKAKPGWGLRLQVQLRSPSQSLAEGRKHRPPLPLPEP 113
S HP A PP +P + G G PSQ + G + RP P P P
Sbjct: 70 SGAPHPDSRTRPAARPPHPRTRSPPGRSGSGTTFSAVPPRPSQHQS-GSRLRPAAPGPRP 128
Query: 114 HCDSRSTS 121
C S S
Sbjct: 129 GCSSARAS 136
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.129 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,859,376
Number of Sequences: 37866
Number of extensions: 443477
Number of successful extensions: 3058
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 307
Number of HSP's that attempted gapping in prelim test: 2746
Number of HSP's gapped (non-prelim): 610
length of query: 156
length of database: 18,247,518
effective HSP length: 94
effective length of query: 62
effective length of database: 14,688,114
effective search space: 910663068
effective search space used: 910663068
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.