Search of human proteins with 239743684

Search of human proteins with 239743684

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239743684 PREDICTED: hypothetical protein LOC138864 [Homo
sapiens]
         (144 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169183850 PREDICTED: similar to hCG1809973 [Homo sapiens]          292   8e-80
gi|169179690 PREDICTED: similar to ATP synthase, H+ transporting...   292   8e-80
gi|239743684 PREDICTED: hypothetical protein LOC138864 [Homo sap...   292   8e-80
gi|169179753 PREDICTED: similar to hCG1809973 [Homo sapiens]          275   7e-75
gi|5453559 ATP synthase, H+ transporting, mitochondrial F0 compl...   240   3e-64
gi|51479152 ATP synthase, H+ transporting, mitochondrial F0 comp...   181   2e-46
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]    32   0.24 
gi|91992162 mutL homolog 3 isoform 1 [Homo sapiens]                    31   0.41 
gi|91992160 mutL homolog 3 isoform 2 [Homo sapiens]                    31   0.41 
gi|229577185 epidermal growth factor receptor pathway substrate ...    30   0.91 
gi|4503593 epidermal growth factor receptor pathway substrate 15...    30   0.91 
gi|114431236 zinc finger protein 462 [Homo sapiens]                    30   0.91 
gi|205277396 dynactin 1 isoform 4 [Homo sapiens]                       29   1.2  
gi|205277392 dynactin 1 isoform 3 [Homo sapiens]                       29   1.2  
gi|13259508 dynactin 1 isoform 2 [Homo sapiens]                        29   1.2  
gi|13259510 dynactin 1 isoform 1 [Homo sapiens]                        29   1.2  
gi|18378731 HMG-BOX transcription factor BBX isoform 2 [Homo sap...    29   1.2  
gi|186972148 enolase superfamily 1 isoform rTSalpha [Homo sapiens]     29   1.6  
gi|42544119 enolase superfamily 1 isoform rTS beta [Homo sapiens]      29   1.6  
gi|42544117 rTS beta protein isoform rTS gamma [Homo sapiens]          29   1.6  
gi|4885583 Rho-associated, coiled-coil containing protein kinase...    28   2.0  
gi|120587023 down-regulated in metastasis [Homo sapiens]               28   3.5  
gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name...    28   3.5  
gi|7706681 REV1-like isoform 1 [Homo sapiens]                          28   3.5  
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]         28   3.5  
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]         28   3.5  
gi|217035121 HMG-BOX transcription factor BBX isoform 1 [Homo sa...    28   3.5  
gi|40548397 NADP-dependent retinol dehydrogenase/reductase [Homo...    28   3.5  
gi|214010158 NADP-dependent retinol dehydrogenase/reductase [Hom...    28   3.5  
gi|214010156 NADP-dependent retinol dehydrogenase/reductase [Hom...    28   3.5  

>gi|169183850 PREDICTED: similar to hCG1809973 [Homo sapiens]
          Length = 144

 Score =  292 bits (747), Expect = 8e-80
 Identities = 144/144 (100%), Positives = 144/144 (100%)

Query: 1   MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60
           MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS
Sbjct: 1   MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60

Query: 61  VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120
           VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE
Sbjct: 61  VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120

Query: 121 KMRNLIPFDQTTTEDLNEAFPETK 144
           KMRNLIPFDQTTTEDLNEAFPETK
Sbjct: 121 KMRNLIPFDQTTTEDLNEAFPETK 144


>gi|169179690 PREDICTED: similar to ATP synthase, H+ transporting,
           mitochondrial F0 complex, subunit d [Homo sapiens]
          Length = 144

 Score =  292 bits (747), Expect = 8e-80
 Identities = 144/144 (100%), Positives = 144/144 (100%)

Query: 1   MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60
           MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS
Sbjct: 1   MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60

Query: 61  VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120
           VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE
Sbjct: 61  VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120

Query: 121 KMRNLIPFDQTTTEDLNEAFPETK 144
           KMRNLIPFDQTTTEDLNEAFPETK
Sbjct: 121 KMRNLIPFDQTTTEDLNEAFPETK 144


>gi|239743684 PREDICTED: hypothetical protein LOC138864 [Homo
           sapiens]
          Length = 144

 Score =  292 bits (747), Expect = 8e-80
 Identities = 144/144 (100%), Positives = 144/144 (100%)

Query: 1   MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60
           MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS
Sbjct: 1   MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60

Query: 61  VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120
           VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE
Sbjct: 61  VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120

Query: 121 KMRNLIPFDQTTTEDLNEAFPETK 144
           KMRNLIPFDQTTTEDLNEAFPETK
Sbjct: 121 KMRNLIPFDQTTTEDLNEAFPETK 144


>gi|169179753 PREDICTED: similar to hCG1809973 [Homo sapiens]
          Length = 160

 Score =  275 bits (704), Expect = 7e-75
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60
           MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS
Sbjct: 1   MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60

Query: 61  VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120
           VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE
Sbjct: 61  VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120

Query: 121 KMRNLIPFDQTTTEDL 136
           KMRNLIPFDQTTTEDL
Sbjct: 121 KMRNLIPFDQTTTEDL 136


>gi|5453559 ATP synthase, H+ transporting, mitochondrial F0 complex,
           subunit d isoform a [Homo sapiens]
          Length = 161

 Score =  240 bits (613), Expect = 3e-64
 Identities = 118/144 (81%), Positives = 129/144 (89%)

Query: 1   MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60
           MAG+KLALK IDWV   E I +NQKAIA+SL SWNE LTSRLA LPEN P+IDW YYKA+
Sbjct: 1   MAGRKLALKTIDWVAFAEIIPQNQKAIASSLKSWNETLTSRLAALPENPPAIDWAYYKAN 60

Query: 61  VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120
           VAKAGLVDDFEKKFNALK PVPEDKYTAQVDAEEKEDVK+CAEW+SLSKARI +YEK++E
Sbjct: 61  VAKAGLVDDFEKKFNALKVPVPEDKYTAQVDAEEKEDVKSCAEWVSLSKARIVEYEKEME 120

Query: 121 KMRNLIPFDQTTTEDLNEAFPETK 144
           KM+NLIPFDQ T EDLNEAFPETK
Sbjct: 121 KMKNLIPFDQMTIEDLNEAFPETK 144


>gi|51479152 ATP synthase, H+ transporting, mitochondrial F0
           complex, subunit d isoform b [Homo sapiens]
          Length = 137

 Score =  181 bits (459), Expect = 2e-46
 Identities = 95/144 (65%), Positives = 106/144 (73%), Gaps = 24/144 (16%)

Query: 1   MAGQKLALKIIDWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKAS 60
           MAG+KLALK IDWV   E I +NQKAIA+SL SWNE LTSRLA LPEN P+IDW YYKA+
Sbjct: 1   MAGRKLALKTIDWVAFAEIIPQNQKAIASSLKSWNETLTSRLAALPENPPAIDWAYYKAN 60

Query: 61  VAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLE 120
           VAKAGLVDDFEKK                        VK+CAEW+SLSKARI +YEK++E
Sbjct: 61  VAKAGLVDDFEKK------------------------VKSCAEWVSLSKARIVEYEKEME 96

Query: 121 KMRNLIPFDQTTTEDLNEAFPETK 144
           KM+NLIPFDQ T EDLNEAFPETK
Sbjct: 97  KMKNLIPFDQMTIEDLNEAFPETK 120


>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
          Length = 1684

 Score = 31.6 bits (70), Expect = 0.24
 Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 17/134 (12%)

Query: 22   RNQKAIANSLTSWNEILTSRLAILPENKPSIDWTYYKASVAKAGLVDDFE---------- 71
            RN      ++ S NE L +R+  L  N   ++    +   AKA +  + E          
Sbjct: 1055 RNSTLQCETINSDNEDLLARIETLQSNAKLLEVQILEVQRAKAMVDKELEAEKLQKEQKI 1114

Query: 72   -------KKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLEKMRN 124
                    +   L+  + ++K   Q   +E E VK  A+  +L    I  YE+ ++++  
Sbjct: 1115 KEHATTVNELEELQVQLQKEKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKELNQ 1174

Query: 125  LIPFDQTTTEDLNE 138
             +       EDL +
Sbjct: 1175 KLTNKNNKIEDLEQ 1188


>gi|91992162 mutL homolog 3 isoform 1 [Homo sapiens]
          Length = 1453

 Score = 30.8 bits (68), Expect = 0.41
 Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 19/143 (13%)

Query: 12   DWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDW----TYYKASVAKAGLV 67
            D  T   S ++N K  +NS T+ N +++    +LP N   +         +AS  + G +
Sbjct: 939  DSATQDNSFNKNSKTHSNSNTTENCVISETPLVLPYNNSKVTGKDSDVLIRASEQQIGSL 998

Query: 68   D-----------DFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYE 116
            D           D     N + F   E K  A+  +E +E    C++W       +G+  
Sbjct: 999  DSPSGMLMNPVEDATGDQNGICFQSEESK--ARACSETEESNTCCSDWQRHFDVALGRM- 1055

Query: 117  KQLEKMRNLIPFDQTTTEDLNEA 139
              + KM  L  F    TED+  A
Sbjct: 1056 VYVNKMTGLSTF-IAPTEDIQAA 1077


>gi|91992160 mutL homolog 3 isoform 2 [Homo sapiens]
          Length = 1429

 Score = 30.8 bits (68), Expect = 0.41
 Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 19/143 (13%)

Query: 12   DWVTSWESISRNQKAIANSLTSWNEILTSRLAILPENKPSIDW----TYYKASVAKAGLV 67
            D  T   S ++N K  +NS T+ N +++    +LP N   +         +AS  + G +
Sbjct: 939  DSATQDNSFNKNSKTHSNSNTTENCVISETPLVLPYNNSKVTGKDSDVLIRASEQQIGSL 998

Query: 68   D-----------DFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYE 116
            D           D     N + F   E K  A+  +E +E    C++W       +G+  
Sbjct: 999  DSPSGMLMNPVEDATGDQNGICFQSEESK--ARACSETEESNTCCSDWQRHFDVALGRM- 1055

Query: 117  KQLEKMRNLIPFDQTTTEDLNEA 139
              + KM  L  F    TED+  A
Sbjct: 1056 VYVNKMTGLSTF-IAPTEDIQAA 1077


>gi|229577185 epidermal growth factor receptor pathway substrate 15
           isoform B [Homo sapiens]
          Length = 582

 Score = 29.6 bits (65), Expect = 0.91
 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 15/88 (17%)

Query: 72  KKFNALKFPVPE-----DKYTAQVDAEEKEDVKTCAEWMSL----------SKARIGQYE 116
           +K  A K  V E     D+  AQ++ + KE  K CAE   L           +++I  YE
Sbjct: 71  QKLQAQKQQVQELLDELDEQKAQLEEQLKEVRKKCAEEAQLISSLKAELTSQESQISTYE 130

Query: 117 KQLEKMRNLIPFDQTTTEDLNEAFPETK 144
           ++L K R  +   Q  T +L E+    K
Sbjct: 131 EELAKAREELSRLQQETAELEESVESGK 158


>gi|4503593 epidermal growth factor receptor pathway substrate 15
           isoform A [Homo sapiens]
          Length = 896

 Score = 29.6 bits (65), Expect = 0.91
 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 15/88 (17%)

Query: 72  KKFNALKFPVPE-----DKYTAQVDAEEKEDVKTCAEWMSL----------SKARIGQYE 116
           +K  A K  V E     D+  AQ++ + KE  K CAE   L           +++I  YE
Sbjct: 385 QKLQAQKQQVQELLDELDEQKAQLEEQLKEVRKKCAEEAQLISSLKAELTSQESQISTYE 444

Query: 117 KQLEKMRNLIPFDQTTTEDLNEAFPETK 144
           ++L K R  +   Q  T +L E+    K
Sbjct: 445 EELAKAREELSRLQQETAELEESVESGK 472


>gi|114431236 zinc finger protein 462 [Homo sapiens]
          Length = 2506

 Score = 29.6 bits (65), Expect = 0.91
 Identities = 13/55 (23%), Positives = 29/55 (52%)

Query: 83   EDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLEKMRNLIPFDQTTTEDLN 137
            E K+T ++D+  +++ K    +  + +  + Q E+  EKM +    D+   E++N
Sbjct: 2336 ETKHTEELDSHLRDEHKVSRNFELVGRVNLDQLEQMKEKMESSSSDDEDKEEEMN 2390


>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
          Length = 1139

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 6/87 (6%)

Query: 37  ILTSRLAILPENKPSIDWTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKE 96
           +LTS  A+ P   PS +    +A V       D E+K   L+    EDK   +   + K 
Sbjct: 66  VLTSPGAVPPLPSPSKEEEGLRAQVR------DLEEKLETLRLKRAEDKAKLKELEKHKI 119

Query: 97  DVKTCAEWMSLSKARIGQYEKQLEKMR 123
            ++   EW S  + +    +++L++ R
Sbjct: 120 QLEQVQEWKSKMQEQQADLQRRLKEAR 146


>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
          Length = 1253

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 6/87 (6%)

Query: 37  ILTSRLAILPENKPSIDWTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKE 96
           +LTS  A+ P   PS +    +A V       D E+K   L+    EDK   +   + K 
Sbjct: 180 VLTSPGAVPPLPSPSKEEEGLRAQVR------DLEEKLETLRLKRAEDKAKLKELEKHKI 233

Query: 97  DVKTCAEWMSLSKARIGQYEKQLEKMR 123
            ++   EW S  + +    +++L++ R
Sbjct: 234 QLEQVQEWKSKMQEQQADLQRRLKEAR 260


>gi|13259508 dynactin 1 isoform 2 [Homo sapiens]
          Length = 1144

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 6/87 (6%)

Query: 37  ILTSRLAILPENKPSIDWTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKE 96
           +LTS  A+ P   PS +    +A V       D E+K   L+    EDK   +   + K 
Sbjct: 66  VLTSPGAVPPLPSPSKEEEGLRAQVR------DLEEKLETLRLKRAEDKAKLKELEKHKI 119

Query: 97  DVKTCAEWMSLSKARIGQYEKQLEKMR 123
            ++   EW S  + +    +++L++ R
Sbjct: 120 QLEQVQEWKSKMQEQQADLQRRLKEAR 146


>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
          Length = 1278

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 6/87 (6%)

Query: 37  ILTSRLAILPENKPSIDWTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKE 96
           +LTS  A+ P   PS +    +A V       D E+K   L+    EDK   +   + K 
Sbjct: 200 VLTSPGAVPPLPSPSKEEEGLRAQVR------DLEEKLETLRLKRAEDKAKLKELEKHKI 253

Query: 97  DVKTCAEWMSLSKARIGQYEKQLEKMR 123
            ++   EW S  + +    +++L++ R
Sbjct: 254 QLEQVQEWKSKMQEQQADLQRRLKEAR 280


>gi|18378731 HMG-BOX transcription factor BBX isoform 2 [Homo
           sapiens]
          Length = 911

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)

Query: 61  VAKAGLVDDFEKKFNALK--FPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQ 118
           +  A L ++FEKKFN+L    PV  D+    V  ++K+     +E    SK    ++  +
Sbjct: 684 LGSAKLDEEFEKKFNSLPQYSPVTFDRKCVPVPRKKKKTGNVSSEPTKTSKGSGDKWSNK 743

Query: 119 LEKMRNLIPFDQTTTEDLNEAFPETK 144
              +  + P +   +ED N   P  K
Sbjct: 744 QLFLDAIHPTEAIFSEDRNTMEPVHK 769


>gi|186972148 enolase superfamily 1 isoform rTSalpha [Homo sapiens]
          Length = 361

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 54  WTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMS 106
           WT +K  V  A L DD  ++   ++  +  +K T  +DA ++ DV    EWMS
Sbjct: 134 WTRFKVKVG-ADLQDDM-RRCQIIRDMIGPEK-TLMMDANQRWDVPEAVEWMS 183


>gi|42544119 enolase superfamily 1 isoform rTS beta [Homo sapiens]
          Length = 443

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 54  WTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMS 106
           WT +K  V  A L DD  ++   ++  +  +K T  +DA ++ DV    EWMS
Sbjct: 216 WTRFKVKVG-ADLQDDM-RRCQIIRDMIGPEK-TLMMDANQRWDVPEAVEWMS 265


>gi|42544117 rTS beta protein isoform rTS gamma [Homo sapiens]
          Length = 450

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 54  WTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMS 106
           WT +K  V  A L DD  ++   ++  +  +K T  +DA ++ DV    EWMS
Sbjct: 237 WTRFKVKVG-ADLQDDM-RRCQIIRDMIGPEK-TLMMDANQRWDVPEAVEWMS 286


>gi|4885583 Rho-associated, coiled-coil containing protein kinase 1
           [Homo sapiens]
          Length = 1354

 Score = 28.5 bits (62), Expect = 2.0
 Identities = 13/50 (26%), Positives = 28/50 (56%)

Query: 93  EEKEDVKTCAEWMSLSKARIGQYEKQLEKMRNLIPFDQTTTEDLNEAFPE 142
           ++ ED+K  ++   L+  ++ Q +KQLE+  +L+  +  T   L ++  E
Sbjct: 521 DQLEDLKKVSQNSQLANEKLSQLQKQLEEANDLLRTESDTAVRLRKSHTE 570


>gi|120587023 down-regulated in metastasis [Homo sapiens]
          Length = 2785

 Score = 27.7 bits (60), Expect = 3.5
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 57   YKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKE 96
            +K    + G +++ E    A++ P PE     +VD EEKE
Sbjct: 1688 HKTLEEQMGKIENEENAIEAIELPEPEAMELERVDEEEKE 1727


>gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name
            family member (tag-184) [Homo sapiens]
          Length = 2785

 Score = 27.7 bits (60), Expect = 3.5
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 57   YKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAEEKE 96
            +K    + G +++ E    A++ P PE     +VD EEKE
Sbjct: 1688 HKTLEEQMGKIENEENAIEAIELPEPEAMELERVDEEEKE 1727


>gi|7706681 REV1-like isoform 1 [Homo sapiens]
          Length = 1251

 Score = 27.7 bits (60), Expect = 3.5
 Identities = 20/109 (18%), Positives = 43/109 (39%), Gaps = 8/109 (7%)

Query: 39  TSRLAILPENKPSIDWTYYKASVAKAGLVDDFEKKFNALKFPVPEDKYTAQVDAE-EKED 97
           T R  + P   P ++W YY+  + K    D  +       +  P+      +D+   + +
Sbjct: 452 TGRAPLRPGANPQLEWQYYQNKILKGKAADIPDSSL----WENPDSAQANGIDSVLSRAE 507

Query: 98  VKTC---AEWMSLSKARIGQYEKQLEKMRNLIPFDQTTTEDLNEAFPET 143
           + +C   A  + +       + KQL      +P+D    +++ +   ET
Sbjct: 508 IASCSYEARQLGIKNGMFFGHAKQLCPNLQAVPYDFHAYKEVAQTLYET 556


>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
          Length = 3907

 Score = 27.7 bits (60), Expect = 3.5
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 6/75 (8%)

Query: 68   DDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLEKMRNLIP 127
            DD +K+  AL+  V E++ +  ++ E++++     E M L +      EKQLEKMR  + 
Sbjct: 2017 DDLQKQVKALEIDV-EEQVSRFIELEQEKNT----ELMDLRQQNQA-LEKQLEKMRKFLD 2070

Query: 128  FDQTTTEDLNEAFPE 142
                  E   + F +
Sbjct: 2071 EQAIDREHERDVFQQ 2085


>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
          Length = 3899

 Score = 27.7 bits (60), Expect = 3.5
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 6/75 (8%)

Query: 68   DDFEKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLEKMRNLIP 127
            DD +K+  AL+  V E++ +  ++ E++++     E M L +      EKQLEKMR  + 
Sbjct: 2017 DDLQKQVKALEIDV-EEQVSRFIELEQEKNT----ELMDLRQQNQA-LEKQLEKMRKFLD 2070

Query: 128  FDQTTTEDLNEAFPE 142
                  E   + F +
Sbjct: 2071 EQAIDREHERDVFQQ 2085


>gi|217035121 HMG-BOX transcription factor BBX isoform 1 [Homo
           sapiens]
          Length = 941

 Score = 27.7 bits (60), Expect = 3.5
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 61  VAKAGLVDDFEKKFNALK--FPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQ 118
           +  A L ++FEKKFN+L    PV  D+    V  ++K+     +E    SK      +K 
Sbjct: 684 LGSAKLDEEFEKKFNSLPQYSPVTFDRKCVPVPRKKKKTGNVSSEPTKTSKGPFQSQKKN 743

Query: 119 L 119
           L
Sbjct: 744 L 744


>gi|40548397 NADP-dependent retinol dehydrogenase/reductase [Homo
           sapiens]
          Length = 319

 Score = 27.7 bits (60), Expect = 3.5
 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 12/75 (16%)

Query: 71  EKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLEKMRN------ 124
           E    ALK    E   T  +D  + E+VK  A+W+   K ++G  EK L  + N      
Sbjct: 63  ESGSTALKAETSERLRTVLLDVTDPENVKRTAQWV---KNQVG--EKGLWGLINNAGVPG 117

Query: 125 -LIPFDQTTTEDLNE 138
            L P D  T ED  E
Sbjct: 118 VLAPTDWLTLEDYRE 132


>gi|214010158 NADP-dependent retinol dehydrogenase/reductase [Homo
           sapiens]
          Length = 319

 Score = 27.7 bits (60), Expect = 3.5
 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 12/75 (16%)

Query: 71  EKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLEKMRN------ 124
           E    ALK    E   T  +D  + E+VK  A+W+   K ++G  EK L  + N      
Sbjct: 63  ESGSTALKAETSERLRTVLLDVTDPENVKRTAQWV---KNQVG--EKGLWGLINNAGVPG 117

Query: 125 -LIPFDQTTTEDLNE 138
            L P D  T ED  E
Sbjct: 118 VLAPTDWLTLEDYRE 132


>gi|214010156 NADP-dependent retinol dehydrogenase/reductase [Homo
           sapiens]
          Length = 319

 Score = 27.7 bits (60), Expect = 3.5
 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 12/75 (16%)

Query: 71  EKKFNALKFPVPEDKYTAQVDAEEKEDVKTCAEWMSLSKARIGQYEKQLEKMRN------ 124
           E    ALK    E   T  +D  + E+VK  A+W+   K ++G  EK L  + N      
Sbjct: 63  ESGSTALKAETSERLRTVLLDVTDPENVKRTAQWV---KNQVG--EKGLWGLINNAGVPG 117

Query: 125 -LIPFDQTTTEDLNE 138
            L P D  T ED  E
Sbjct: 118 VLAPTDWLTLEDYRE 132


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.127    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,188,577
Number of Sequences: 37866
Number of extensions: 196380
Number of successful extensions: 488
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 468
Number of HSP's gapped (non-prelim): 46
length of query: 144
length of database: 18,247,518
effective HSP length: 92
effective length of query: 52
effective length of database: 14,763,846
effective search space: 767719992
effective search space used: 767719992
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.