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Search of human proteins with 239742637
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742637 PREDICTED: hypothetical protein XP_002342585 [Homo
sapiens]
(91 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239742637 PREDICTED: hypothetical protein XP_002342585 [Homo ... 200 2e-52
gi|239754136 PREDICTED: similar to PRED15 [Homo sapiens] 196 4e-51
gi|239742633 PREDICTED: hypothetical protein XP_002342584 [Homo ... 192 4e-50
gi|239742590 PREDICTED: hypothetical protein XP_002342565 [Homo ... 189 4e-49
gi|239742582 PREDICTED: hypothetical protein XP_002342563 [Homo ... 189 4e-49
gi|239742588 PREDICTED: hypothetical protein XP_002342566 [Homo ... 187 2e-48
gi|239742578 PREDICTED: hypothetical protein XP_002342558 [Homo ... 187 2e-48
gi|239742576 PREDICTED: hypothetical protein XP_002342559 [Homo ... 187 2e-48
gi|239742574 PREDICTED: hypothetical protein XP_002342560 [Homo ... 187 2e-48
gi|239742572 PREDICTED: hypothetical protein XP_002342561 [Homo ... 187 2e-48
gi|239742562 PREDICTED: hypothetical protein XP_002342557 [Homo ... 187 2e-48
gi|239742558 PREDICTED: hypothetical protein XP_002342553 [Homo ... 187 2e-48
gi|239742907 PREDICTED: hypothetical protein XP_002342647 [Homo ... 185 6e-48
gi|239753728 PREDICTED: similar to hCG1997218 [Homo sapiens] 79 1e-15
gi|239748245 PREDICTED: hypothetical protein XP_002346621 [Homo ... 79 1e-15
gi|239742146 PREDICTED: hypothetical protein XP_002342415 [Homo ... 79 1e-15
gi|14150141 programmed cell death 2-like [Homo sapiens] 28 1.2
gi|50592996 tubulin, beta, 4 [Homo sapiens] 28 1.6
gi|58743365 ring finger protein 157 [Homo sapiens] 28 1.6
gi|21735569 claspin [Homo sapiens] 27 2.7
gi|5454096 serine/threonine kinase 4 [Homo sapiens] 27 2.7
gi|31317305 M-phase phosphoprotein 10 [Homo sapiens] 27 4.6
gi|223633965 proteoglycan 3 [Homo sapiens] 26 6.1
gi|4503509 eukaryotic translation initiation factor 3, subunit 1... 26 6.1
gi|60498978 elastin microfibril interfacer 2 [Homo sapiens] 26 6.1
gi|14210536 tubulin, beta 6 [Homo sapiens] 26 6.1
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof... 26 7.9
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof... 26 7.9
gi|110611228 utrophin [Homo sapiens] 26 7.9
gi|5174735 tubulin, beta, 2 [Homo sapiens] 26 7.9
>gi|239742637 PREDICTED: hypothetical protein XP_002342585 [Homo
sapiens]
Length = 91
Score = 200 bits (508), Expect = 2e-52
Identities = 91/91 (100%), Positives = 91/91 (100%)
Query: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDG 60
MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDG
Sbjct: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDG 60
Query: 61 DEEFVGKWSEVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWSEVTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSEVTLTMQRHCRHCAPVLETGIR 91
>gi|239754136 PREDICTED: similar to PRED15 [Homo sapiens]
Length = 91
Score = 196 bits (497), Expect = 4e-51
Identities = 89/91 (97%), Positives = 90/91 (98%)
Query: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDG 60
MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLN FDQNVHSDMDNKVQAEVVSDG
Sbjct: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDG 60
Query: 61 DEEFVGKWSEVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWSEVTLT+QRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91
>gi|239742633 PREDICTED: hypothetical protein XP_002342584 [Homo
sapiens]
Length = 91
Score = 192 bits (489), Expect = 4e-50
Identities = 88/91 (96%), Positives = 89/91 (97%)
Query: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDG 60
MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLN FDQNVHSDMDNKVQAEVVSD
Sbjct: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDR 60
Query: 61 DEEFVGKWSEVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWSEVTLT+QRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91
>gi|239742590 PREDICTED: hypothetical protein XP_002342565 [Homo
sapiens]
Length = 91
Score = 189 bits (480), Expect = 4e-49
Identities = 86/91 (94%), Positives = 89/91 (97%)
Query: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDG 60
MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLN FDQNV+SDMDNKVQAEVVS+G
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60
Query: 61 DEEFVGKWSEVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWS+VTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
>gi|239742582 PREDICTED: hypothetical protein XP_002342563 [Homo
sapiens]
Length = 91
Score = 189 bits (480), Expect = 4e-49
Identities = 86/91 (94%), Positives = 89/91 (97%)
Query: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDG 60
MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLN FDQNV+SDMDNKVQAEVVS+G
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60
Query: 61 DEEFVGKWSEVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWS+VTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
>gi|239742588 PREDICTED: hypothetical protein XP_002342566 [Homo
sapiens]
Length = 91
Score = 187 bits (474), Expect = 2e-48
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDG 60
MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLN FDQNV+SDMDNKVQAEVVS+
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60
Query: 61 DEEFVGKWSEVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWS+VTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
>gi|239742578 PREDICTED: hypothetical protein XP_002342558 [Homo
sapiens]
Length = 91
Score = 187 bits (474), Expect = 2e-48
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDG 60
MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLN FDQNV+SDMDNKVQAEVVS+
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60
Query: 61 DEEFVGKWSEVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWS+VTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
>gi|239742576 PREDICTED: hypothetical protein XP_002342559 [Homo
sapiens]
Length = 91
Score = 187 bits (474), Expect = 2e-48
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDG 60
MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLN FDQNV+SDMDNKVQAEVVS+
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60
Query: 61 DEEFVGKWSEVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWS+VTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
>gi|239742574 PREDICTED: hypothetical protein XP_002342560 [Homo
sapiens]
Length = 91
Score = 187 bits (474), Expect = 2e-48
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDG 60
MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLN FDQNV+SDMDNKVQAEVVS+
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60
Query: 61 DEEFVGKWSEVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWS+VTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
>gi|239742572 PREDICTED: hypothetical protein XP_002342561 [Homo
sapiens]
Length = 91
Score = 187 bits (474), Expect = 2e-48
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDG 60
MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLN FDQNV+SDMDNKVQAEVVS+
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60
Query: 61 DEEFVGKWSEVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWS+VTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
>gi|239742562 PREDICTED: hypothetical protein XP_002342557 [Homo
sapiens]
Length = 91
Score = 187 bits (474), Expect = 2e-48
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDG 60
MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLN FDQNV+SDMDNKVQAEVVS+
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60
Query: 61 DEEFVGKWSEVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWS+VTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
>gi|239742558 PREDICTED: hypothetical protein XP_002342553 [Homo
sapiens]
Length = 91
Score = 187 bits (474), Expect = 2e-48
Identities = 85/91 (93%), Positives = 88/91 (96%)
Query: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDG 60
MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLN FDQNV+SDMDNKVQAEVVS+
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60
Query: 61 DEEFVGKWSEVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWS+VTLTMQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91
>gi|239742907 PREDICTED: hypothetical protein XP_002342647 [Homo
sapiens]
Length = 91
Score = 185 bits (470), Expect = 6e-48
Identities = 84/91 (92%), Positives = 88/91 (96%)
Query: 1 MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDG 60
MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLN FDQNV+SDM+NKVQAEVVS+G
Sbjct: 1 MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMNNKVQAEVVSEG 60
Query: 61 DEEFVGKWSEVTLTMQRHCRHCAPVLETGIR 91
DEEFVGKWS+VTLTMQRHCRHC PVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCPPVLETGIR 91
>gi|239753728 PREDICTED: similar to hCG1997218 [Homo sapiens]
Length = 171
Score = 78.6 bits (192), Expect = 1e-15
Identities = 35/45 (77%), Positives = 39/45 (86%)
Query: 26 MWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDGDEEFVGKWSE 70
MWESLE PRDLLN FDQN +DMDN++QAEVVSDGDEE VG WS+
Sbjct: 1 MWESLEPPRDLLNGFDQNADNDMDNEIQAEVVSDGDEELVGNWSK 45
>gi|239748245 PREDICTED: hypothetical protein XP_002346621 [Homo
sapiens]
Length = 171
Score = 78.6 bits (192), Expect = 1e-15
Identities = 35/45 (77%), Positives = 39/45 (86%)
Query: 26 MWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDGDEEFVGKWSE 70
MWESLE PRDLLN FDQN +DMDN++QAEVVSDGDEE VG WS+
Sbjct: 1 MWESLEPPRDLLNGFDQNADNDMDNEIQAEVVSDGDEELVGNWSK 45
>gi|239742146 PREDICTED: hypothetical protein XP_002342415 [Homo
sapiens]
Length = 171
Score = 78.6 bits (192), Expect = 1e-15
Identities = 35/45 (77%), Positives = 39/45 (86%)
Query: 26 MWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDGDEEFVGKWSE 70
MWESLE PRDLLN FDQN +DMDN++QAEVVSDGDEE VG WS+
Sbjct: 1 MWESLEPPRDLLNGFDQNADNDMDNEIQAEVVSDGDEELVGNWSK 45
>gi|14150141 programmed cell death 2-like [Homo sapiens]
Length = 358
Score = 28.5 bits (62), Expect = 1.2
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 21 EEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDGDEEF 64
E+D + + +L+ LL D+ Q MD + + +DGDE++
Sbjct: 195 EDDYRDFVNLDHAHSLLRDYQQREGIAMDQLLSQSLPNDGDEKY 238
>gi|50592996 tubulin, beta, 4 [Homo sapiens]
Length = 450
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
Query: 3 KQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDGDE 62
K W TG G + +E +E + M DL++++ Q + D + + E+ D +E
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNM-------NDLVSEYQQ--YQDATAEEEGEMYEDDEE 442
Query: 63 E 63
E
Sbjct: 443 E 443
>gi|58743365 ring finger protein 157 [Homo sapiens]
Length = 679
Score = 28.1 bits (61), Expect = 1.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 42 QNVHSDMDNKVQAEVVSDGDEEFVGKWSEVTLTMQRHCRH 81
+N ++ D+KV + VSD E V S+V T+ CRH
Sbjct: 255 ENKYNTQDSKVAEDEVSDNSAECVVCLSDVRDTLILPCRH 294
>gi|21735569 claspin [Homo sapiens]
Length = 1339
Score = 27.3 bits (59), Expect = 2.7
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 18 EGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDGDEEFVGKWSE 70
E +E+ + + + D D D++ HSD N + E D DEE + K SE
Sbjct: 990 EEEDEEEEFGDFRLVSNDNEFDSDEDEHSDSGNDLALEDHEDDDEEELLKRSE 1042
>gi|5454096 serine/threonine kinase 4 [Homo sapiens]
Length = 487
Score = 27.3 bits (59), Expect = 2.7
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 37 LNDFDQNVHSDMDNKVQAEVVSDGDEEFVGKWSEVTLTMQRHCRHCAPVLETGI 90
+N F ++V + N ++ DGD EF+ W+ L Q+ P++E I
Sbjct: 408 INSFGKSVPGPLKNSSDWKIPQDGDYEFLKSWTVEDL--QKRLLALDPMMEQEI 459
>gi|31317305 M-phase phosphoprotein 10 [Homo sapiens]
Length = 681
Score = 26.6 bits (57), Expect = 4.6
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 22 EDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDGDEE 63
+D ++W+ LEL + + + QN S+ N ++ + +E+
Sbjct: 72 DDEQIWQQLELQNEPILQYFQNAVSETINDEDISLLPESEEQ 113
>gi|223633965 proteoglycan 3 [Homo sapiens]
Length = 225
Score = 26.2 bits (56), Expect = 6.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 21 EEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDGDEE 63
E D ESLE DL D D + + D + EV+ EE
Sbjct: 21 ENDAPHLESLETQADLGQDLDSSKEQERDLALTEEVIQAEGEE 63
>gi|4503509 eukaryotic translation initiation factor 3, subunit 10
theta, 150/170kDa [Homo sapiens]
Length = 1382
Score = 26.2 bits (56), Expect = 6.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 14 WNRLEGSEEDRKMWESLELPRDLLNDFDQ 42
W R EG +EDR E PR L +D D+
Sbjct: 918 WRRGEGRDEDRSHRRDEERPRRLGDDEDR 946
>gi|60498978 elastin microfibril interfacer 2 [Homo sapiens]
Length = 1053
Score = 26.2 bits (56), Expect = 6.1
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 48 MDNKVQAEVVSDGDEEFVGKWSE----VTLTMQRHCRHCAPVLET 88
+DN+ +V + D +F KW+E + +T + HC + ET
Sbjct: 430 LDNEFDRLIVPEPDVDFDAKWNELDARINVTEKNAEEHCFYIEET 474
>gi|14210536 tubulin, beta 6 [Homo sapiens]
Length = 446
Score = 26.2 bits (56), Expect = 6.1
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 16/69 (23%)
Query: 3 KQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDGDE 62
K W TG G + +E +E + M DL++++ Q Q +DG+E
Sbjct: 392 KAFLHWFTGEGMDEMEFTEAESNM-------NDLVSEYQQ---------YQDATANDGEE 435
Query: 63 EFVGKWSEV 71
F + E+
Sbjct: 436 AFEDEEEEI 444
>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
[Homo sapiens]
Length = 6907
Score = 25.8 bits (55), Expect = 7.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 7 KWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNV 44
K + + N + E +KMW+ L+L LN+ D V
Sbjct: 3704 KMLQQKSKNIEKAQEIQKKMWDELDLWHSKLNELDSEV 3741
>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1
[Homo sapiens]
Length = 6885
Score = 25.8 bits (55), Expect = 7.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 7 KWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNV 44
K + + N + E +KMW+ L+L LN+ D V
Sbjct: 3704 KMLQQKSKNIEKAQEIQKKMWDELDLWHSKLNELDSEV 3741
>gi|110611228 utrophin [Homo sapiens]
Length = 3433
Score = 25.8 bits (55), Expect = 7.9
Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 28 ESLELPR---DLLNDFDQNVHSDMDNKVQAEVVSDGDEEFVGKWSEVTLTMQ 76
E +E+ R D L++ Q+V +DN ++ ++ EE +W + ++
Sbjct: 578 EDMEMKRQTLDQLSEIGQDVGQLLDNSKASKKINSDSEELTQRWDSLVQRLE 629
>gi|5174735 tubulin, beta, 2 [Homo sapiens]
Length = 445
Score = 25.8 bits (55), Expect = 7.9
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
Query: 3 KQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDGDE 62
K W TG G + +E +E + M DL++++ Q + D + + E + +E
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNM-------NDLVSEYQQ--YQDATAEEEGEFEEEAEE 442
Query: 63 E 63
E
Sbjct: 443 E 443
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,887,546
Number of Sequences: 37866
Number of extensions: 146469
Number of successful extensions: 449
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 421
Number of HSP's gapped (non-prelim): 33
length of query: 91
length of database: 18,247,518
effective HSP length: 62
effective length of query: 29
effective length of database: 15,899,826
effective search space: 461094954
effective search space used: 461094954
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.