Guide to the Human Genome
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Name: LOC100291294 Sequence: fasta or formatted (171aa) NCBI GI: 239748245
Description:

PREDICTED: hypothetical protein XP_002346621

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         10           2
 C cysteine            2.3          4           1
 D aspartate           7.0         12           2
 E glutamate          11.1         19           2
 F phenylalanine       2.9          5           1
 G glycine             5.3          9           1
 H histidine           1.8          3           1
 I isoleucine          5.3          9           1
 K lysine              7.0         12           2
 L leucine            10.5         18           2
 M methionine          4.1          7           1
 N asparagine          5.3          9           1
 P proline             5.8         10           2
 Q glutamine           4.1          7           2
 R arginine            3.5          6           1
 S serine              8.2         14           1
 T threonine           1.8          3           1
 V valine              4.7          8           2
 W tryptophan          2.3          4           1
 Y tyrosine            1.2          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein XP_002346621 
LOC100293187          1.000   PREDICTED: similar to hCG1997218 
LOC100289257          1.000   PREDICTED: hypothetical protein XP_002342415 
LOC100293762          0.382   PREDICTED: similar to FLJ44955 protein 
LOC100291141          0.382   PREDICTED: hypothetical protein XP_002346844 
LOC100289222          0.382   PREDICTED: hypothetical protein XP_002342694 
LOC100287454          0.174   PREDICTED: hypothetical protein XP_002342565 
LOC100287339          0.174   PREDICTED: hypothetical protein XP_002342563 
LOC100293831          0.171   PREDICTED: similar to PRED15 
LOC100288096          0.168   PREDICTED: hypothetical protein XP_002342647 
LOC100287490          0.168   PREDICTED: hypothetical protein XP_002342566 
LOC100287185          0.168   PREDICTED: hypothetical protein XP_002342558 
LOC100287220          0.168   PREDICTED: hypothetical protein XP_002342559 
LOC100287248          0.168   PREDICTED: hypothetical protein XP_002342560 
LOC100287280          0.168   PREDICTED: hypothetical protein XP_002342561 
LOC100287154          0.168   PREDICTED: hypothetical protein XP_002342557 
LOC100286984          0.168   PREDICTED: hypothetical protein XP_002342553 
LOC100287777          0.165   PREDICTED: hypothetical protein XP_002342585 
LOC100287683          0.162   PREDICTED: hypothetical protein XP_002342584 
ZRANB1                0.028   zinc finger, RAN-binding domain containing 1 protei...
MYBPC1                0.015   myosin binding protein C, slow type isoform 4 
MYBPC1                0.015   myosin binding protein C, slow type isoform 3 
MYBPC1                0.015   myosin binding protein C, slow type isoform 2 
MYBPC1                0.015   myosin binding protein C, slow type isoform 1 
MYO5B                 0.015   myosin VB 
ST18                  0.015   suppression of tumorigenicity 18 
NEK11                 0.012   NIMA-related kinase 11 isoform 1 
MYOCD                 0.012   myocardin isoform 1 
MYOCD                 0.012   myocardin isoform 2 
MYOCD                 0.012   myocardin isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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