Search of human proteins with 239742633

Search of human proteins with 239742633

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239742633 PREDICTED: hypothetical protein XP_002342584 [Homo
sapiens]
         (91 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239742633 PREDICTED: hypothetical protein XP_002342584 [Homo ...   199   4e-52
gi|239754136 PREDICTED: similar to PRED15 [Homo sapiens]              196   3e-51
gi|239742637 PREDICTED: hypothetical protein XP_002342585 [Homo ...   192   4e-50
gi|239742588 PREDICTED: hypothetical protein XP_002342566 [Homo ...   187   1e-48
gi|239742578 PREDICTED: hypothetical protein XP_002342558 [Homo ...   187   1e-48
gi|239742576 PREDICTED: hypothetical protein XP_002342559 [Homo ...   187   1e-48
gi|239742574 PREDICTED: hypothetical protein XP_002342560 [Homo ...   187   1e-48
gi|239742572 PREDICTED: hypothetical protein XP_002342561 [Homo ...   187   1e-48
gi|239742562 PREDICTED: hypothetical protein XP_002342557 [Homo ...   187   1e-48
gi|239742558 PREDICTED: hypothetical protein XP_002342553 [Homo ...   187   1e-48
gi|239742590 PREDICTED: hypothetical protein XP_002342565 [Homo ...   187   2e-48
gi|239742582 PREDICTED: hypothetical protein XP_002342563 [Homo ...   187   2e-48
gi|239742907 PREDICTED: hypothetical protein XP_002342647 [Homo ...   183   2e-47
gi|239753728 PREDICTED: similar to hCG1997218 [Homo sapiens]           78   1e-15
gi|239748245 PREDICTED: hypothetical protein XP_002346621 [Homo ...    78   1e-15
gi|239742146 PREDICTED: hypothetical protein XP_002342415 [Homo ...    78   1e-15
gi|157502184 kinesin family member 6 [Homo sapiens]                    30   0.42 
gi|58743365 ring finger protein 157 [Homo sapiens]                     28   1.6  
gi|194018732 hypothetical protein LOC100130958 [Homo sapiens]          27   2.7  
gi|50592996 tubulin, beta, 4 [Homo sapiens]                            26   6.1  
gi|60498978 elastin microfibril interfacer 2 [Homo sapiens]            26   6.1  
gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens]          26   6.1  
gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]          26   6.1  
gi|31542729 DEAH (Asp-Glu-Ala-His) box polypeptide 40 [Homo sapi...    26   7.9  

>gi|239742633 PREDICTED: hypothetical protein XP_002342584 [Homo
          sapiens]
          Length = 91

 Score =  199 bits (506), Expect = 4e-52
 Identities = 91/91 (100%), Positives = 91/91 (100%)

Query: 1  MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDR 60
          MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDR
Sbjct: 1  MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDR 60

Query: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91
          DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91


>gi|239754136 PREDICTED: similar to PRED15 [Homo sapiens]
          Length = 91

 Score =  196 bits (499), Expect = 3e-51
 Identities = 90/91 (98%), Positives = 90/91 (98%)

Query: 1  MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDR 60
          MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSD 
Sbjct: 1  MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDG 60

Query: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91
          DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91


>gi|239742637 PREDICTED: hypothetical protein XP_002342585 [Homo
          sapiens]
          Length = 91

 Score =  192 bits (489), Expect = 4e-50
 Identities = 88/91 (96%), Positives = 89/91 (97%)

Query: 1  MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDR 60
          MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLN FDQNVHSDMDNKVQAEVVSD 
Sbjct: 1  MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNDFDQNVHSDMDNKVQAEVVSDG 60

Query: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91
          DEEFVGKWSEVTLT+QRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSEVTLTMQRHCRHCAPVLETGIR 91


>gi|239742588 PREDICTED: hypothetical protein XP_002342566 [Homo
          sapiens]
          Length = 91

 Score =  187 bits (476), Expect = 1e-48
 Identities = 85/91 (93%), Positives = 89/91 (97%)

Query: 1  MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDR 60
          MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLNGFDQNV+SDMDNKVQAEVVS+ 
Sbjct: 1  MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60

Query: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91
          DEEFVGKWS+VTLT+QRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91


>gi|239742578 PREDICTED: hypothetical protein XP_002342558 [Homo
          sapiens]
          Length = 91

 Score =  187 bits (476), Expect = 1e-48
 Identities = 85/91 (93%), Positives = 89/91 (97%)

Query: 1  MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDR 60
          MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLNGFDQNV+SDMDNKVQAEVVS+ 
Sbjct: 1  MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60

Query: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91
          DEEFVGKWS+VTLT+QRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91


>gi|239742576 PREDICTED: hypothetical protein XP_002342559 [Homo
          sapiens]
          Length = 91

 Score =  187 bits (476), Expect = 1e-48
 Identities = 85/91 (93%), Positives = 89/91 (97%)

Query: 1  MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDR 60
          MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLNGFDQNV+SDMDNKVQAEVVS+ 
Sbjct: 1  MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60

Query: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91
          DEEFVGKWS+VTLT+QRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91


>gi|239742574 PREDICTED: hypothetical protein XP_002342560 [Homo
          sapiens]
          Length = 91

 Score =  187 bits (476), Expect = 1e-48
 Identities = 85/91 (93%), Positives = 89/91 (97%)

Query: 1  MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDR 60
          MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLNGFDQNV+SDMDNKVQAEVVS+ 
Sbjct: 1  MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60

Query: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91
          DEEFVGKWS+VTLT+QRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91


>gi|239742572 PREDICTED: hypothetical protein XP_002342561 [Homo
          sapiens]
          Length = 91

 Score =  187 bits (476), Expect = 1e-48
 Identities = 85/91 (93%), Positives = 89/91 (97%)

Query: 1  MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDR 60
          MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLNGFDQNV+SDMDNKVQAEVVS+ 
Sbjct: 1  MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60

Query: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91
          DEEFVGKWS+VTLT+QRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91


>gi|239742562 PREDICTED: hypothetical protein XP_002342557 [Homo
          sapiens]
          Length = 91

 Score =  187 bits (476), Expect = 1e-48
 Identities = 85/91 (93%), Positives = 89/91 (97%)

Query: 1  MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDR 60
          MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLNGFDQNV+SDMDNKVQAEVVS+ 
Sbjct: 1  MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60

Query: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91
          DEEFVGKWS+VTLT+QRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91


>gi|239742558 PREDICTED: hypothetical protein XP_002342553 [Homo
          sapiens]
          Length = 91

 Score =  187 bits (476), Expect = 1e-48
 Identities = 85/91 (93%), Positives = 89/91 (97%)

Query: 1  MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDR 60
          MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLNGFDQNV+SDMDNKVQAEVVS+ 
Sbjct: 1  MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEA 60

Query: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91
          DEEFVGKWS+VTLT+QRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91


>gi|239742590 PREDICTED: hypothetical protein XP_002342565 [Homo
          sapiens]
          Length = 91

 Score =  187 bits (475), Expect = 2e-48
 Identities = 85/91 (93%), Positives = 89/91 (97%)

Query: 1  MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDR 60
          MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLNGFDQNV+SDMDNKVQAEVVS+ 
Sbjct: 1  MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60

Query: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91
          DEEFVGKWS+VTLT+QRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91


>gi|239742582 PREDICTED: hypothetical protein XP_002342563 [Homo
          sapiens]
          Length = 91

 Score =  187 bits (475), Expect = 2e-48
 Identities = 85/91 (93%), Positives = 89/91 (97%)

Query: 1  MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDR 60
          MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLNGFDQNV+SDMDNKVQAEVVS+ 
Sbjct: 1  MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMDNKVQAEVVSEG 60

Query: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91
          DEEFVGKWS+VTLT+QRHCRHCAPVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCAPVLETGIR 91


>gi|239742907 PREDICTED: hypothetical protein XP_002342647 [Homo
          sapiens]
          Length = 91

 Score =  183 bits (465), Expect = 2e-47
 Identities = 83/91 (91%), Positives = 88/91 (96%)

Query: 1  MWKQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDR 60
          MWKQLWKWVTGRGWN LEGSEEDRKMWESLELPRDLLNGFDQNV+SDM+NKVQAEVVS+ 
Sbjct: 1  MWKQLWKWVTGRGWNSLEGSEEDRKMWESLELPRDLLNGFDQNVNSDMNNKVQAEVVSEG 60

Query: 61 DEEFVGKWSEVTLTIQRHCRHCAPVLETGIR 91
          DEEFVGKWS+VTLT+QRHCRHC PVLETGIR
Sbjct: 61 DEEFVGKWSKVTLTMQRHCRHCPPVLETGIR 91


>gi|239753728 PREDICTED: similar to hCG1997218 [Homo sapiens]
          Length = 171

 Score = 78.2 bits (191), Expect = 1e-15
 Identities = 35/45 (77%), Positives = 39/45 (86%)

Query: 26 MWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDRDEEFVGKWSE 70
          MWESLE PRDLLNGFDQN  +DMDN++QAEVVSD DEE VG WS+
Sbjct: 1  MWESLEPPRDLLNGFDQNADNDMDNEIQAEVVSDGDEELVGNWSK 45


>gi|239748245 PREDICTED: hypothetical protein XP_002346621 [Homo
          sapiens]
          Length = 171

 Score = 78.2 bits (191), Expect = 1e-15
 Identities = 35/45 (77%), Positives = 39/45 (86%)

Query: 26 MWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDRDEEFVGKWSE 70
          MWESLE PRDLLNGFDQN  +DMDN++QAEVVSD DEE VG WS+
Sbjct: 1  MWESLEPPRDLLNGFDQNADNDMDNEIQAEVVSDGDEELVGNWSK 45


>gi|239742146 PREDICTED: hypothetical protein XP_002342415 [Homo
          sapiens]
          Length = 171

 Score = 78.2 bits (191), Expect = 1e-15
 Identities = 35/45 (77%), Positives = 39/45 (86%)

Query: 26 MWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDRDEEFVGKWSE 70
          MWESLE PRDLLNGFDQN  +DMDN++QAEVVSD DEE VG WS+
Sbjct: 1  MWESLEPPRDLLNGFDQNADNDMDNEIQAEVVSDGDEELVGNWSK 45


>gi|157502184 kinesin family member 6 [Homo sapiens]
          Length = 814

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 21 EEDRKMWESLE--LPRDLLNGFDQNVHSDMDNKVQAEVVSDRDEEFV 65
          +ED K+  SLE  LPRDL +GF  N       K Q     D ++E V
Sbjct: 27 DEDEKLIPSLEIILPRDLADGFVNNKRESYKFKFQRIFDQDANQETV 73


>gi|58743365 ring finger protein 157 [Homo sapiens]
          Length = 679

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 42  QNVHSDMDNKVQAEVVSDRDEEFVGKWSEVTLTIQRHCRH 81
           +N ++  D+KV  + VSD   E V   S+V  T+   CRH
Sbjct: 255 ENKYNTQDSKVAEDEVSDNSAECVVCLSDVRDTLILPCRH 294


>gi|194018732 hypothetical protein LOC100130958 [Homo sapiens]
          Length = 242

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 17/63 (26%)

Query: 18  EGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDRDEEFVGKWSEVTLTIQR 77
           E   E   +WE+L    D LNG  + VH                EE +GK  E    +Q 
Sbjct: 67  EELRETHSLWEALHRELDSLNG--EKVHL---------------EEVLGKKQEALRILQM 109

Query: 78  HCR 80
           HC+
Sbjct: 110 HCQ 112


>gi|50592996 tubulin, beta, 4 [Homo sapiens]
          Length = 450

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 9/61 (14%)

Query: 3   KQLWKWVTGRGWNRLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDRDE 62
           K    W TG G + +E +E +  M        DL++ + Q  + D   + + E+  D +E
Sbjct: 392 KAFLHWYTGEGMDEMEFTEAESNM-------NDLVSEYQQ--YQDATAEEEGEMYEDDEE 442

Query: 63  E 63
           E
Sbjct: 443 E 443


>gi|60498978 elastin microfibril interfacer 2 [Homo sapiens]
          Length = 1053

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 12/70 (17%)

Query: 23  DRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDRDEEFVGKWSE----VTLTIQRH 78
           D+K+    E  R +LNG        +DN+    +V + D +F  KW+E    + +T +  
Sbjct: 413 DQKIERVAEATR-MLNG-------RLDNEFDRLIVPEPDVDFDAKWNELDARINVTEKNA 464

Query: 79  CRHCAPVLET 88
             HC  + ET
Sbjct: 465 EEHCFYIEET 474


>gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens]
          Length = 1044

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 55  EVVSDRDEEFVGKWSEVTLTIQRHCRH 81
           EV  +  E F+ + ++ T+TIQR  RH
Sbjct: 255 EVTEEEAERFIHQVNQATVTIQRWYRH 281


>gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]
          Length = 1080

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 55  EVVSDRDEEFVGKWSEVTLTIQRHCRH 81
           EV  +  E F+ + ++ T+TIQR  RH
Sbjct: 255 EVTEEEAERFIHQVNQATVTIQRWYRH 281


>gi|31542729 DEAH (Asp-Glu-Ala-His) box polypeptide 40 [Homo
           sapiens]
          Length = 779

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 14/57 (24%), Positives = 27/57 (47%)

Query: 16  RLEGSEEDRKMWESLELPRDLLNGFDQNVHSDMDNKVQAEVVSDRDEEFVGKWSEVT 72
           R E  E+ R+ W + E  + L +G  ++V   M  +   + +SD    F+ +  + T
Sbjct: 712 RREVREDARRRWTNKENVKQLKDGISKDVLKKMQRRNDDKSISDARARFLERKQQRT 768


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,823,107
Number of Sequences: 37866
Number of extensions: 141932
Number of successful extensions: 393
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 372
Number of HSP's gapped (non-prelim): 24
length of query: 91
length of database: 18,247,518
effective HSP length: 62
effective length of query: 29
effective length of database: 15,899,826
effective search space: 461094954
effective search space used: 461094954
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.