Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239741463
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741463 PREDICTED: hypothetical protein XP_002342210 [Homo
sapiens]
(244 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753040 PREDICTED: hypothetical protein XP_002345331 [Homo ... 498 e-141
gi|239747598 PREDICTED: hypothetical protein XP_002347782 [Homo ... 498 e-141
gi|239741463 PREDICTED: hypothetical protein XP_002342210 [Homo ... 498 e-141
gi|51173735 ras responsive element binding protein 1 isoform 2 [... 37 0.016
gi|51173737 ras responsive element binding protein 1 isoform 1 [... 37 0.016
gi|239752808 PREDICTED: similar to c-jun [Homo sapiens] 35 0.046
gi|239747354 PREDICTED: hypothetical protein XP_002346430 [Homo ... 35 0.046
gi|239741179 PREDICTED: hypothetical protein XP_002342128 [Homo ... 35 0.046
gi|148833504 interleukin 16 isoform 2 [Homo sapiens] 35 0.046
gi|27262655 interleukin 16 isoform 1 precursor [Homo sapiens] 35 0.046
gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens] 35 0.046
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 35 0.078
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 35 0.078
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 35 0.078
gi|239750235 PREDICTED: hypothetical protein [Homo sapiens] 34 0.10
gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo ... 34 0.10
gi|11038659 ADAM metallopeptidase with thrombospondin type 1 mot... 34 0.10
gi|110825974 ADAM metallopeptidase with thrombospondin type 1 mo... 34 0.10
gi|23510413 sorting nexin 26 [Homo sapiens] 34 0.10
gi|40807447 papillary renal cell carcinoma translocation-associa... 34 0.10
gi|40807450 papillary renal cell carcinoma translocation-associa... 34 0.10
gi|4503421 dual specificity phosphatase 9 [Homo sapiens] 34 0.13
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 33 0.17
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 33 0.17
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 33 0.17
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 33 0.17
gi|52630419 sterol regulatory element binding transcription fact... 33 0.23
gi|22547195 sterol regulatory element binding transcription fact... 33 0.23
gi|4758222 dual-specificity tyrosine-(Y)-phosphorylation regulat... 33 0.23
gi|5922001 dual-specificity tyrosine-(Y)-phosphorylation regulat... 33 0.23
>gi|239753040 PREDICTED: hypothetical protein XP_002345331 [Homo
sapiens]
Length = 244
Score = 498 bits (1282), Expect = e-141
Identities = 244/244 (100%), Positives = 244/244 (100%)
Query: 1 MSGGRLHAASPALPSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGAL 60
MSGGRLHAASPALPSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGAL
Sbjct: 1 MSGGRLHAASPALPSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGAL 60
Query: 61 LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120
LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP
Sbjct: 61 LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120
Query: 121 VTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPP 180
VTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPP
Sbjct: 121 VTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPP 180
Query: 181 DGFSPASLSLSFWAWASLECRHFIRRFWNHTFTCAAPHRETRRDTEMRPRFAPIRLACTL 240
DGFSPASLSLSFWAWASLECRHFIRRFWNHTFTCAAPHRETRRDTEMRPRFAPIRLACTL
Sbjct: 181 DGFSPASLSLSFWAWASLECRHFIRRFWNHTFTCAAPHRETRRDTEMRPRFAPIRLACTL 240
Query: 241 KPPP 244
KPPP
Sbjct: 241 KPPP 244
>gi|239747598 PREDICTED: hypothetical protein XP_002347782 [Homo
sapiens]
Length = 244
Score = 498 bits (1282), Expect = e-141
Identities = 244/244 (100%), Positives = 244/244 (100%)
Query: 1 MSGGRLHAASPALPSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGAL 60
MSGGRLHAASPALPSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGAL
Sbjct: 1 MSGGRLHAASPALPSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGAL 60
Query: 61 LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120
LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP
Sbjct: 61 LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120
Query: 121 VTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPP 180
VTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPP
Sbjct: 121 VTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPP 180
Query: 181 DGFSPASLSLSFWAWASLECRHFIRRFWNHTFTCAAPHRETRRDTEMRPRFAPIRLACTL 240
DGFSPASLSLSFWAWASLECRHFIRRFWNHTFTCAAPHRETRRDTEMRPRFAPIRLACTL
Sbjct: 181 DGFSPASLSLSFWAWASLECRHFIRRFWNHTFTCAAPHRETRRDTEMRPRFAPIRLACTL 240
Query: 241 KPPP 244
KPPP
Sbjct: 241 KPPP 244
>gi|239741463 PREDICTED: hypothetical protein XP_002342210 [Homo
sapiens]
Length = 244
Score = 498 bits (1282), Expect = e-141
Identities = 244/244 (100%), Positives = 244/244 (100%)
Query: 1 MSGGRLHAASPALPSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGAL 60
MSGGRLHAASPALPSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGAL
Sbjct: 1 MSGGRLHAASPALPSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGAL 60
Query: 61 LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120
LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP
Sbjct: 61 LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120
Query: 121 VTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPP 180
VTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPP
Sbjct: 121 VTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPP 180
Query: 181 DGFSPASLSLSFWAWASLECRHFIRRFWNHTFTCAAPHRETRRDTEMRPRFAPIRLACTL 240
DGFSPASLSLSFWAWASLECRHFIRRFWNHTFTCAAPHRETRRDTEMRPRFAPIRLACTL
Sbjct: 181 DGFSPASLSLSFWAWASLECRHFIRRFWNHTFTCAAPHRETRRDTEMRPRFAPIRLACTL 240
Query: 241 KPPP 244
KPPP
Sbjct: 241 KPPP 244
>gi|51173735 ras responsive element binding protein 1 isoform 2 [Homo
sapiens]
Length = 1687
Score = 37.0 bits (84), Expect = 0.016
Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 21/188 (11%)
Query: 14 PSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSG-------LLGAL-LAVGC 65
P + S +PSP P L PS + + P AP + L G + LAV
Sbjct: 959 PEEEAGSSEQPSPCPAPGPSLPVTLGPSGILESPMAPAPAATPEPPAQPLQGPVQLAVPI 1018
Query: 66 VAGRSSEAPPPPRLLAQPALV--LLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAPVTG 123
+ +PP L+ AL+ LLR L LLP PP+ LP L ++ A +
Sbjct: 1019 YSSALVSSPP---LVGSSALLSGTALLRPLRPKPPLLLPKPPVTEELPPLASI--AQIIS 1073
Query: 124 ALITVVWCRERSLPSVRSVSLGAMSRDSESL------LSLSASPSERLGLLSSCSPSAAG 177
++ + + + S G+ + S+SL + +A+P+ S P A
Sbjct: 1074 SVSSAPTLLKTKVADPGPASTGSNTTASDSLGGSVPKAATTATPAATTSPKESSEPPAPA 1133
Query: 178 APPDGFSP 185
+ P+ SP
Sbjct: 1134 SSPEAASP 1141
>gi|51173737 ras responsive element binding protein 1 isoform 1 [Homo
sapiens]
Length = 1742
Score = 37.0 bits (84), Expect = 0.016
Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 21/188 (11%)
Query: 14 PSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSG-------LLGAL-LAVGC 65
P + S +PSP P L PS + + P AP + L G + LAV
Sbjct: 959 PEEEAGSSEQPSPCPAPGPSLPVTLGPSGILESPMAPAPAATPEPPAQPLQGPVQLAVPI 1018
Query: 66 VAGRSSEAPPPPRLLAQPALV--LLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAPVTG 123
+ +PP L+ AL+ LLR L LLP PP+ LP L ++ A +
Sbjct: 1019 YSSALVSSPP---LVGSSALLSGTALLRPLRPKPPLLLPKPPVTEELPPLASI--AQIIS 1073
Query: 124 ALITVVWCRERSLPSVRSVSLGAMSRDSESL------LSLSASPSERLGLLSSCSPSAAG 177
++ + + + S G+ + S+SL + +A+P+ S P A
Sbjct: 1074 SVSSAPTLLKTKVADPGPASTGSNTTASDSLGGSVPKAATTATPAATTSPKESSEPPAPA 1133
Query: 178 APPDGFSP 185
+ P+ SP
Sbjct: 1134 SSPEAASP 1141
>gi|239752808 PREDICTED: similar to c-jun [Homo sapiens]
Length = 324
Score = 35.4 bits (80), Expect = 0.046
Identities = 30/74 (40%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Query: 77 PRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALL-AVMRAPVTG-----ALITVVW 130
PR+L L ++ RLL LL L L PP PL P A A M AP+TG L +V W
Sbjct: 170 PRVLHGHLLGQVVRRLLLLLGLALKPPLPLPPATEATAGATMPAPLTGCAADVTLGSVFW 229
Query: 131 ----CRERSLPSVR 140
R R+ PS +
Sbjct: 230 LCSSARARTKPSAK 243
>gi|239747354 PREDICTED: hypothetical protein XP_002346430 [Homo
sapiens]
Length = 324
Score = 35.4 bits (80), Expect = 0.046
Identities = 30/74 (40%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Query: 77 PRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALL-AVMRAPVTG-----ALITVVW 130
PR+L L ++ RLL LL L L PP PL P A A M AP+TG L +V W
Sbjct: 170 PRVLHGHLLGQVVRRLLLLLGLALKPPLPLPPATEATAGATMPAPLTGCAADVTLGSVFW 229
Query: 131 ----CRERSLPSVR 140
R R+ PS +
Sbjct: 230 LCSSARARTKPSAK 243
>gi|239741179 PREDICTED: hypothetical protein XP_002342128 [Homo
sapiens]
Length = 324
Score = 35.4 bits (80), Expect = 0.046
Identities = 30/74 (40%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Query: 77 PRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALL-AVMRAPVTG-----ALITVVW 130
PR+L L ++ RLL LL L L PP PL P A A M AP+TG L +V W
Sbjct: 170 PRVLHGHLLGQVVRRLLLLLGLALKPPLPLPPATEATAGATMPAPLTGCAADVTLGSVFW 229
Query: 131 ----CRERSLPSVR 140
R R+ PS +
Sbjct: 230 LCSSARARTKPSAK 243
>gi|148833504 interleukin 16 isoform 2 [Homo sapiens]
Length = 1332
Score = 35.4 bits (80), Expect = 0.046
Identities = 39/127 (30%), Positives = 51/127 (40%), Gaps = 26/127 (20%)
Query: 71 SEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAPVTGALITVVW 130
SE+PPP R QP K LPP P PL LL+ G ++ +
Sbjct: 920 SESPPPGR---QP-------------NQKTLPPGP--DPLLRLLSTQAEESQGPVLKMPS 961
Query: 131 CRERSLPSVRSVSLGAMSRDSES--LLSLSASPSERLGLLSSCSPSAAGA------PPDG 182
R RS P RS S D ++ L S+S+ S + C PS+ P +G
Sbjct: 962 QRARSFPLTRSQSCETKLLDEKTSKLYSISSQVSSAVMKSLLCLPSSISCAQTPCIPKEG 1021
Query: 183 FSPASLS 189
SP S S
Sbjct: 1022 ASPTSSS 1028
>gi|27262655 interleukin 16 isoform 1 precursor [Homo sapiens]
Length = 631
Score = 35.4 bits (80), Expect = 0.046
Identities = 39/127 (30%), Positives = 51/127 (40%), Gaps = 26/127 (20%)
Query: 71 SEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAPVTGALITVVW 130
SE+PPP R QP K LPP P PL LL+ G ++ +
Sbjct: 219 SESPPPGR---QP-------------NQKTLPPGP--DPLLRLLSTQAEESQGPVLKMPS 260
Query: 131 CRERSLPSVRSVSLGAMSRDSES--LLSLSASPSERLGLLSSCSPSAAGA------PPDG 182
R RS P RS S D ++ L S+S+ S + C PS+ P +G
Sbjct: 261 QRARSFPLTRSQSCETKLLDEKTSKLYSISSQVSSAVMKSLLCLPSSISCAQTPCIPKEG 320
Query: 183 FSPASLS 189
SP S S
Sbjct: 321 ASPTSSS 327
>gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]
Length = 1603
Score = 35.4 bits (80), Expect = 0.046
Identities = 39/124 (31%), Positives = 53/124 (42%), Gaps = 24/124 (19%)
Query: 68 GRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPAL-----LAVMRAPVT 122
GR ++A P RLL P L+ L PPPP PP PAL ++V
Sbjct: 402 GRKADAGPEGRLLPLPMPTGLVAALAE-------PPPPPPPPPPALPGPGPVSVPELKPE 454
Query: 123 GALITVVWCRERSLPSVR---------SVSLGAMSRDSESLLSLSASPS---ERLGLLSS 170
+ VV R+ VR VSLG ++ + + SLS+S S + LGL S
Sbjct: 455 SSQTPVVSTRKGKCRGVRRMVVKMAKIPVSLGRRNKTTYKVSSLSSSLSVEGKELGLRVS 514
Query: 171 CSPS 174
P+
Sbjct: 515 AEPT 518
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 34.7 bits (78), Expect = 0.078
Identities = 49/182 (26%), Positives = 69/182 (37%), Gaps = 32/182 (17%)
Query: 14 PSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGALLAVGCVAGRSSEA 73
PS ++ +P P LG + P P ST PS+P + L + + +
Sbjct: 712 PSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSS 771
Query: 74 PPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLP--PLPALLAVMR-----APVTGA-- 124
PPP P L + PPPPLLP PLPA + +P++ A
Sbjct: 772 PPP----CPPVLTVAT------------PPPPLLPTVPLPAPSSSASPHPCPSPLSNATA 815
Query: 125 ------LITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGA 178
L V +P V + + A S +L S S+S S SS S S+
Sbjct: 816 QSPLPILSPTVSPSPSPIPPVEPL-MSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSP 874
Query: 179 PP 180
PP
Sbjct: 875 PP 876
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 34.7 bits (78), Expect = 0.078
Identities = 49/182 (26%), Positives = 69/182 (37%), Gaps = 32/182 (17%)
Query: 14 PSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGALLAVGCVAGRSSEA 73
PS ++ +P P LG + P P ST PS+P + L + + +
Sbjct: 913 PSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSS 972
Query: 74 PPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLP--PLPALLAVMR-----APVTGA-- 124
PPP P L + PPPPLLP PLPA + +P++ A
Sbjct: 973 PPP----CPPVLTVAT------------PPPPLLPTVPLPAPSSSASPHPCPSPLSNATA 1016
Query: 125 ------LITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGA 178
L V +P V + + A S +L S S+S S SS S S+
Sbjct: 1017 QSPLPILSPTVSPSPSPIPPVEPL-MSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSP 1075
Query: 179 PP 180
PP
Sbjct: 1076 PP 1077
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 34.7 bits (78), Expect = 0.078
Identities = 49/182 (26%), Positives = 69/182 (37%), Gaps = 32/182 (17%)
Query: 14 PSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGALLAVGCVAGRSSEA 73
PS ++ +P P LG + P P ST PS+P + L + + +
Sbjct: 913 PSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPSS 972
Query: 74 PPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLP--PLPALLAVMR-----APVTGA-- 124
PPP P L + PPPPLLP PLPA + +P++ A
Sbjct: 973 PPP----CPPVLTVAT------------PPPPLLPTVPLPAPSSSASPHPCPSPLSNATA 1016
Query: 125 ------LITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGA 178
L V +P V + + A S +L S S+S S SS S S+
Sbjct: 1017 QSPLPILSPTVSPSPSPIPPVEPL-MSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSP 1075
Query: 179 PP 180
PP
Sbjct: 1076 PP 1077
>gi|239750235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 34.3 bits (77), Expect = 0.10
Identities = 55/176 (31%), Positives = 66/176 (37%), Gaps = 35/176 (19%)
Query: 14 PSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGALLAVGCVAGRSSEA 73
P R H T+ W G + P +PS +G LL LL +
Sbjct: 74 PRRPHQRGTEAVKWKDGGLRDPGQWTSEPEQTEPSPCLSGCLLLLLLLTPFLLL------ 127
Query: 74 PPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAPVTGALITVVWCRE 133
LL P L+LL L LLAL LP LL PL LL P+ L ++
Sbjct: 128 ----HLLLLPLLLLLPLFLLAL----SLPLFFLLLPLFLLL-----PLFLPLFIPLFLLP 174
Query: 134 RSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPPDGFSPASLS 189
S PS S S S S S+SP SS SP PP FS +S S
Sbjct: 175 SSSPS---------SSSSPSYSSPSSSP-------SSSSPLPPPPPPPSFSSSSSS 214
>gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo
sapiens]
Length = 257
Score = 34.3 bits (77), Expect = 0.10
Identities = 55/176 (31%), Positives = 66/176 (37%), Gaps = 35/176 (19%)
Query: 14 PSRQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLGALLAVGCVAGRSSEA 73
P R H T+ W G + P +PS +G LL LL +
Sbjct: 74 PRRPHQRGTEAVKWKDGGLRDPGQWTSEPEQTEPSPCLSGCLLLLLLLTPFLLL------ 127
Query: 74 PPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAPVTGALITVVWCRE 133
LL P L+LL L LLAL LP LL PL LL P+ L ++
Sbjct: 128 ----HLLLLPLLLLLPLFLLAL----SLPLFFLLLPLFLLL-----PLFLPLFIPLFLLP 174
Query: 134 RSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLSSCSPSAAGAPPDGFSPASLS 189
S PS S S S S S+SP SS SP PP FS +S S
Sbjct: 175 SSSPS---------SSSSPSYSSPSSSP-------SSSSPLPPPPPPPSFSSSSSS 214
>gi|11038659 ADAM metallopeptidase with thrombospondin type 1 motif,
2 isoform 2 [Homo sapiens]
Length = 566
Score = 34.3 bits (77), Expect = 0.10
Identities = 24/50 (48%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 76 PPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAPVTGAL 125
PP A+ L LL LL LL LLPPPP PP A LA P G L
Sbjct: 3 PPAGAARRLLCPALLLLLLLLPPPLLPPPP--PPANARLAAAADPPGGPL 50
>gi|110825974 ADAM metallopeptidase with thrombospondin type 1
motif, 2 isoform 1 preproprotein [Homo sapiens]
Length = 1211
Score = 34.3 bits (77), Expect = 0.10
Identities = 24/50 (48%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 76 PPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAPVTGAL 125
PP A+ L LL LL LL LLPPPP PP A LA P G L
Sbjct: 3 PPAGAARRLLCPALLLLLLLLPPPLLPPPP--PPANARLAAAADPPGGPL 50
>gi|23510413 sorting nexin 26 [Homo sapiens]
Length = 1126
Score = 34.3 bits (77), Expect = 0.10
Identities = 30/82 (36%), Positives = 37/82 (45%), Gaps = 20/82 (24%)
Query: 23 KPSPWLGGCTQGPDP--LRPSTV-------YKQPSAPWAGSGLLGALLAVGCVAGRSSEA 73
KP PWLGG P P RP TV + S+ +G+ LLGA G + A
Sbjct: 607 KPLPWLGGTRAPPQPSGSRPDTVTLRSAKSEESLSSQASGAELLGA-------GGAPASA 659
Query: 74 PPPPRL----LAQPALVLLLLR 91
P P L +P L+ LLLR
Sbjct: 660 TPTPALSPGRSLRPHLIPLLLR 681
>gi|40807447 papillary renal cell carcinoma translocation-associated
gene product isoform 1 [Homo sapiens]
Length = 491
Score = 34.3 bits (77), Expect = 0.10
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 35 PDPLRPSTVYKQPSAPWAGSGLLGALLAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLA 94
PD P ++ AP +G L G ++ G + PPPP++LA PA LL
Sbjct: 14 PDEAEPEPEEEEAVAPTSGPALGGLFASLPAPKG-PALLPPPPQMLA-PAFPPPLLLPPP 71
Query: 95 LLKLKLLPPPPL------LPPLPAL 113
+L PPPPL PP P +
Sbjct: 72 TGDPRLQPPPPLPFGLGGFPPPPGV 96
>gi|40807450 papillary renal cell carcinoma translocation-associated
gene product isoform 2 [Homo sapiens]
Length = 459
Score = 34.3 bits (77), Expect = 0.10
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 35 PDPLRPSTVYKQPSAPWAGSGLLGALLAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLA 94
PD P ++ AP +G L G ++ G + PPPP++LA PA LL
Sbjct: 14 PDEAEPEPEEEEAVAPTSGPALGGLFASLPAPKG-PALLPPPPQMLA-PAFPPPLLLPPP 71
Query: 95 LLKLKLLPPPPL------LPPLPAL 113
+L PPPPL PP P +
Sbjct: 72 TGDPRLQPPPPLPFGLGGFPPPPGV 96
>gi|4503421 dual specificity phosphatase 9 [Homo sapiens]
Length = 384
Score = 33.9 bits (76), Expect = 0.13
Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 21/73 (28%)
Query: 61 LAVGCVAGRSSEAPPPPRLL---------------------AQPALVLLLLRLLALLKLK 99
L C+ R +PP PRLL A PAL+L LR +L
Sbjct: 4 LGRSCLWLRRELSPPRPRLLLLDCRSRELYESARIGGALSVALPALLLRRLRRGSLSVRA 63
Query: 100 LLPPPPLLPPLPA 112
LLP PPL PP PA
Sbjct: 64 LLPGPPLQPPPPA 76
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 33.5 bits (75), Expect = 0.17
Identities = 36/122 (29%), Positives = 46/122 (37%), Gaps = 16/122 (13%)
Query: 11 PALPS-------RQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLL---GAL 60
P LPS R ST P P P P P+T + P+ P + L G L
Sbjct: 329 PPLPSALSTSSLRASMTSTPPPP------VPPPPPPPATALQAPAVPPPPAPLQIAPGVL 382
Query: 61 LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120
P PP A P + + L +++ LPPPP PPLP +P
Sbjct: 383 HPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSP 442
Query: 121 VT 122
VT
Sbjct: 443 VT 444
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 33.5 bits (75), Expect = 0.17
Identities = 36/122 (29%), Positives = 46/122 (37%), Gaps = 16/122 (13%)
Query: 11 PALPS-------RQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLL---GAL 60
P LPS R ST P P P P P+T + P+ P + L G L
Sbjct: 329 PPLPSALSTSSLRASMTSTPPPP------VPPPPPPPATALQAPAVPPPPAPLQIAPGVL 382
Query: 61 LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120
P PP A P + + L +++ LPPPP PPLP +P
Sbjct: 383 HPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSP 442
Query: 121 VT 122
VT
Sbjct: 443 VT 444
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 33.5 bits (75), Expect = 0.17
Identities = 36/122 (29%), Positives = 46/122 (37%), Gaps = 16/122 (13%)
Query: 11 PALPS-------RQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLL---GAL 60
P LPS R ST P P P P P+T + P+ P + L G L
Sbjct: 329 PPLPSALSTSSLRASMTSTPPPP------VPPPPPPPATALQAPAVPPPPAPLQIAPGVL 382
Query: 61 LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120
P PP A P + + L +++ LPPPP PPLP +P
Sbjct: 383 HPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSP 442
Query: 121 VT 122
VT
Sbjct: 443 VT 444
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 33.5 bits (75), Expect = 0.17
Identities = 36/122 (29%), Positives = 46/122 (37%), Gaps = 16/122 (13%)
Query: 11 PALPS-------RQHTVSTKPSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLL---GAL 60
P LPS R ST P P P P P+T + P+ P + L G L
Sbjct: 329 PPLPSALSTSSLRASMTSTPPPP------VPPPPPPPATALQAPAVPPPPAPLQIAPGVL 382
Query: 61 LAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAVMRAP 120
P PP A P + + L +++ LPPPP PPLP +P
Sbjct: 383 HPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSP 442
Query: 121 VT 122
VT
Sbjct: 443 VT 444
>gi|52630419 sterol regulatory element binding transcription factor
1 isoform a [Homo sapiens]
Length = 1177
Score = 33.1 bits (74), Expect = 0.23
Identities = 38/138 (27%), Positives = 50/138 (36%), Gaps = 11/138 (7%)
Query: 50 PWAGSGLLGALLAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPP 109
P+AGSG G A + S +PPP L + L A L P PL PP
Sbjct: 80 PYAGSGAGGTDPASPDTSSPGSLSPPPATLSSS---------LEAFLSGPQAAPSPLSPP 130
Query: 110 LPALLAVMRAPVTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLS 169
PA + P A +E S+P S+ + L + P+ S
Sbjct: 131 QPAPTPLKMYPSMPAFSPGPGIKEESVP--LSILQTPTPQPLPGALLPQSFPAPAPPQFS 188
Query: 170 SCSPSAAGAPPDGFSPAS 187
S +PP GFS S
Sbjct: 189 STPVLGYPSPPGGFSTGS 206
>gi|22547195 sterol regulatory element binding transcription factor
1 isoform b [Homo sapiens]
Length = 1147
Score = 33.1 bits (74), Expect = 0.23
Identities = 38/138 (27%), Positives = 50/138 (36%), Gaps = 11/138 (7%)
Query: 50 PWAGSGLLGALLAVGCVAGRSSEAPPPPRLLAQPALVLLLLRLLALLKLKLLPPPPLLPP 109
P+AGSG G A + S +PPP L + L A L P PL PP
Sbjct: 50 PYAGSGAGGTDPASPDTSSPGSLSPPPATLSSS---------LEAFLSGPQAAPSPLSPP 100
Query: 110 LPALLAVMRAPVTGALITVVWCRERSLPSVRSVSLGAMSRDSESLLSLSASPSERLGLLS 169
PA + P A +E S+P S+ + L + P+ S
Sbjct: 101 QPAPTPLKMYPSMPAFSPGPGIKEESVP--LSILQTPTPQPLPGALLPQSFPAPAPPQFS 158
Query: 170 SCSPSAAGAPPDGFSPAS 187
S +PP GFS S
Sbjct: 159 STPVLGYPSPPGGFSTGS 176
>gi|4758222 dual-specificity tyrosine-(Y)-phosphorylation regulated
kinase 1B isoform a [Homo sapiens]
Length = 629
Score = 33.1 bits (74), Expect = 0.23
Identities = 26/97 (26%), Positives = 35/97 (36%), Gaps = 27/97 (27%)
Query: 24 PSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLG----ALLAVGCVAGRSSEAPPPPRL 79
P P + C + PS QP PWAG + A + + G ++ PP PR
Sbjct: 493 PGPPITDCEMNSPQVPPS----QPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPPQPRY 548
Query: 80 LAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAV 116
L + PP P PP P L+ V
Sbjct: 549 LGR-------------------PPSPTSPPPPELMDV 566
>gi|5922001 dual-specificity tyrosine-(Y)-phosphorylation regulated
kinase 1B isoform c [Homo sapiens]
Length = 601
Score = 33.1 bits (74), Expect = 0.23
Identities = 26/97 (26%), Positives = 35/97 (36%), Gaps = 27/97 (27%)
Query: 24 PSPWLGGCTQGPDPLRPSTVYKQPSAPWAGSGLLG----ALLAVGCVAGRSSEAPPPPRL 79
P P + C + PS QP PWAG + A + + G ++ PP PR
Sbjct: 465 PGPPITDCEMNSPQVPPS----QPLRPWAGGDVPHKTHQAPASASSLPGTGAQLPPQPRY 520
Query: 80 LAQPALVLLLLRLLALLKLKLLPPPPLLPPLPALLAV 116
L + PP P PP P L+ V
Sbjct: 521 LGR-------------------PPSPTSPPPPELMDV 538
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,643,298
Number of Sequences: 37866
Number of extensions: 724251
Number of successful extensions: 4409
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 171
Number of HSP's that attempted gapping in prelim test: 4043
Number of HSP's gapped (non-prelim): 469
length of query: 244
length of database: 18,247,518
effective HSP length: 99
effective length of query: 145
effective length of database: 14,498,784
effective search space: 2102323680
effective search space used: 2102323680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.