Guide to the Human Genome
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Search of human proteins with 239741432

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239741432 PREDICTED: similar to hCG1811644 [Homo sapiens]
         (245 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239752981 PREDICTED: similar to hCG1811644 [Homo sapiens]          497   e-141
gi|239747558 PREDICTED: similar to hCG1811644 [Homo sapiens]          497   e-141
gi|239741432 PREDICTED: similar to hCG1811644 [Homo sapiens]          497   e-141
gi|166197698 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluc...   118   4e-27
gi|16915936 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluco...    70   2e-12
gi|7710152 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos...    70   2e-12
gi|237512959 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluc...    64   1e-10
gi|6912502 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos...    64   1e-10
gi|20302168 toll-like receptor 8 [Homo sapiens]                        30   1.5  
gi|10834994 interleukin 11 precursor [Homo sapiens]                    30   1.9  
gi|149363666 phosphodiesterase 4C isoform PDE4C-2 [Homo sapiens]       29   3.3  
gi|149363646 phosphodiesterase 4C isoform PDE4C-3 [Homo sapiens]       29   3.3  
gi|115529445 phosphodiesterase 4C isoform PDE4C-1 [Homo sapiens]       29   3.3  
gi|110611156 laminin, gamma 3 precursor [Homo sapiens]                 28   5.6  
gi|28466983 leprecan-like 2 [Homo sapiens]                             28   7.3  
gi|186910317 solute carrier family 12, member 3 isoform 2 [Homo ...    28   9.5  
gi|186910315 solute carrier family 12, member 3 isoform 1 [Homo ...    28   9.5  

>gi|239752981 PREDICTED: similar to hCG1811644 [Homo sapiens]
          Length = 245

 Score =  497 bits (1280), Expect = e-141
 Identities = 245/245 (100%), Positives = 245/245 (100%)

Query: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60
           MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF
Sbjct: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60

Query: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKDR 120
           SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKDR
Sbjct: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKDR 120

Query: 121 VFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKNTQIA 180
           VFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKNTQIA
Sbjct: 121 VFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKNTQIA 180

Query: 181 VGRYRLQQGQVEPGYDPQEDPKSCARYALLGPLVGGNLDQVVFSEEESVEQLNCIRLLVL 240
           VGRYRLQQGQVEPGYDPQEDPKSCARYALLGPLVGGNLDQVVFSEEESVEQLNCIRLLVL
Sbjct: 181 VGRYRLQQGQVEPGYDPQEDPKSCARYALLGPLVGGNLDQVVFSEEESVEQLNCIRLLVL 240

Query: 241 ASQES 245
           ASQES
Sbjct: 241 ASQES 245


>gi|239747558 PREDICTED: similar to hCG1811644 [Homo sapiens]
          Length = 245

 Score =  497 bits (1280), Expect = e-141
 Identities = 245/245 (100%), Positives = 245/245 (100%)

Query: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60
           MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF
Sbjct: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60

Query: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKDR 120
           SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKDR
Sbjct: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKDR 120

Query: 121 VFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKNTQIA 180
           VFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKNTQIA
Sbjct: 121 VFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKNTQIA 180

Query: 181 VGRYRLQQGQVEPGYDPQEDPKSCARYALLGPLVGGNLDQVVFSEEESVEQLNCIRLLVL 240
           VGRYRLQQGQVEPGYDPQEDPKSCARYALLGPLVGGNLDQVVFSEEESVEQLNCIRLLVL
Sbjct: 181 VGRYRLQQGQVEPGYDPQEDPKSCARYALLGPLVGGNLDQVVFSEEESVEQLNCIRLLVL 240

Query: 241 ASQES 245
           ASQES
Sbjct: 241 ASQES 245


>gi|239741432 PREDICTED: similar to hCG1811644 [Homo sapiens]
          Length = 245

 Score =  497 bits (1280), Expect = e-141
 Identities = 245/245 (100%), Positives = 245/245 (100%)

Query: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60
           MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF
Sbjct: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60

Query: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKDR 120
           SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKDR
Sbjct: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKDR 120

Query: 121 VFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKNTQIA 180
           VFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKNTQIA
Sbjct: 121 VFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKNTQIA 180

Query: 181 VGRYRLQQGQVEPGYDPQEDPKSCARYALLGPLVGGNLDQVVFSEEESVEQLNCIRLLVL 240
           VGRYRLQQGQVEPGYDPQEDPKSCARYALLGPLVGGNLDQVVFSEEESVEQLNCIRLLVL
Sbjct: 181 VGRYRLQQGQVEPGYDPQEDPKSCARYALLGPLVGGNLDQVVFSEEESVEQLNCIRLLVL 240

Query: 241 ASQES 245
           ASQES
Sbjct: 241 ASQES 245


>gi|166197698 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase C [Homo sapiens]
          Length = 478

 Score =  118 bits (296), Expect = 4e-27
 Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 14/257 (5%)

Query: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60
           +NF +N SDY+++LED + C+  F  AI   +++ +   WV LEFS L   GK++ + D 
Sbjct: 210 LNFCANTSDYYVMLEDDVRCSKNFLTAIKKVIASLEGTYWVTLEFSKLGYIGKLYHSHDL 269

Query: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKD- 119
            RL  F L+F+++ P   LL+ FR LLAQ   I F PS+F H G YS +      ++ D 
Sbjct: 270 PRLAHFLLMFYQEMPCDWLLTHFRGLLAQKNVIRFKPSLFQHMGYYSSYKGTENKLKDDD 329

Query: 120 ---RVFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKN 176
                F  PDNP A++ T+M           Y+   E +    P  G+   ++ + P   
Sbjct: 330 FEEESFDIPDNPPASLYTNMNVFENYEASKAYSSVDEYFWGKPPSTGDVFVIVFENPIII 389

Query: 177 TQIAVGRYR-------LQQGQVEPGYD--PQEDPKSCARYALLGPLVGGNLDQVVFSEEE 227
            +I V           L  G ++ G +  P +  + C+ Y  LG    GN +    +++ 
Sbjct: 390 KKIKVNTGTEDRQNDILHHGALDVGENVMPSKQRRQCSTYLRLGEFKNGNFEMSGVNQKI 449

Query: 228 SVEQLNCIRLLVLASQE 244
             + ++C+R+ V  +Q+
Sbjct: 450 PFD-IHCMRIYVTKTQK 465


>gi|16915936 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase B isoform 2 [Homo
           sapiens]
          Length = 563

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60
           M +A +   Y++ LED I   P + + + +         W+ILEFS L   GK+F + D 
Sbjct: 268 MMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDL 327

Query: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLA--------------QNIPIHFSPSVFHHTGNY 106
           S +  F L+F++D P   LL     +                 N+ I F PS+F H G +
Sbjct: 328 SLIVEFILMFYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTH 387

Query: 107 SVFDDMCFSVEKDRVFG------EPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNP 160
           S        + KD+ FG      E  NP A V T + +     L+  Y L ++ +    P
Sbjct: 388 SSLAGKIQKL-KDKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAY-LREDFFWAFTP 445

Query: 161 LKGNYLTVILDRPQKNTQIAVGRYRLQQGQVE 192
             G+++     +P     + + R+  + G +E
Sbjct: 446 AAGDFIRFRFFQP-----LRLERFFFRSGNIE 472


>gi|7710152 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase B isoform 1 [Homo
           sapiens]
          Length = 548

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60
           M +A +   Y++ LED I   P + + + +         W+ILEFS L   GK+F + D 
Sbjct: 253 MMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDL 312

Query: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLA--------------QNIPIHFSPSVFHHTGNY 106
           S +  F L+F++D P   LL     +                 N+ I F PS+F H G +
Sbjct: 313 SLIVEFILMFYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTH 372

Query: 107 SVFDDMCFSVEKDRVFG------EPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNP 160
           S        + KD+ FG      E  NP A V T + +     L+  Y L ++ +    P
Sbjct: 373 SSLAGKIQKL-KDKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAY-LREDFFWAFTP 430

Query: 161 LKGNYLTVILDRPQKNTQIAVGRYRLQQGQVE 192
             G+++     +P     + + R+  + G +E
Sbjct: 431 AAGDFIRFRFFQP-----LRLERFFFRSGNIE 457


>gi|237512959 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase A isoform 2 [Homo
           sapiens]
          Length = 423

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 32/217 (14%)

Query: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60
           M +A     Y++ LED I     +   I +         W+ILEFS L   GK+F   D 
Sbjct: 118 MMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDL 177

Query: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLA--------------QNIPIHFSPSVFHHTGNY 106
           + +  F  +F+K+ P   LL     +                 N+ I F PS+F H G +
Sbjct: 178 TLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLH 237

Query: 107 SVFDDMCFSVEK--DRVFGEP------DNPVATVLTDMVSMLAVILQYTYTLNKEGYSTL 158
           S    +   ++K  D+ + +P       NP A V T +       L+ TY + ++ +  +
Sbjct: 238 S---SLSGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTY-MGEDFFWAI 293

Query: 159 NPLKGNYLTVILDRPQKNTQIAVGRYRLQQG-QVEPG 194
            P+ G+Y+    D+P     + V  Y    G Q  PG
Sbjct: 294 TPIAGDYILFKFDKP-----VNVESYLFHSGNQEHPG 325


>gi|6912502 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase A isoform 1 [Homo
           sapiens]
          Length = 535

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 32/217 (14%)

Query: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60
           M +A     Y++ LED I     +   I +         W+ILEFS L   GK+F   D 
Sbjct: 246 MMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDL 305

Query: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLA--------------QNIPIHFSPSVFHHTGNY 106
           + +  F  +F+K+ P   LL     +                 N+ I F PS+F H G +
Sbjct: 306 TLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLH 365

Query: 107 SVFDDMCFSVEK--DRVFGEP------DNPVATVLTDMVSMLAVILQYTYTLNKEGYSTL 158
           S    +   ++K  D+ + +P       NP A V T +       L+ TY + ++ +  +
Sbjct: 366 S---SLSGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTY-MGEDFFWAI 421

Query: 159 NPLKGNYLTVILDRPQKNTQIAVGRYRLQQG-QVEPG 194
            P+ G+Y+    D+P     + V  Y    G Q  PG
Sbjct: 422 TPIAGDYILFKFDKP-----VNVESYLFHSGNQEHPG 453


>gi|20302168 toll-like receptor 8 [Homo sapiens]
          Length = 1041

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 11/102 (10%)

Query: 76  THLLLSEFR-LLLAQNIPIHFSPSVFHHTGN-------YSVFDDMCFSVEKDRVFGEPDN 127
           TH+    F+ L     I ++ +P+V H  GN        ++ D    +++  R     DN
Sbjct: 76  THITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELLLEDN 135

Query: 128 PVATV---LTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYL 166
            +  +   L + ++ L++I    Y + KEG S L  LK  YL
Sbjct: 136 QLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYL 177


>gi|10834994 interleukin 11 precursor [Homo sapiens]
          Length = 199

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 7/89 (7%)

Query: 132 VLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNY--LTVILDRPQKNTQIAVGRYRLQQG 189
           VLT + + L   L++   L + G S+L  L+     L   LDR  +  Q+ + R  L Q 
Sbjct: 93  VLTRLRADLLSYLRHVQWLRRAGGSSLKTLEPELGTLQARLDRLLRRLQLLMSRLALPQP 152

Query: 190 QVEPGYDPQEDPKSC-----ARYALLGPL 213
             +P   P   P S      A +A+LG L
Sbjct: 153 PPDPPAPPLAPPSSAWGGIRAAHAILGGL 181


>gi|149363666 phosphodiesterase 4C isoform PDE4C-2 [Homo sapiens]
          Length = 606

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 20/166 (12%)

Query: 4   ASNLSDYFLLLEDHIHCTPKF-----AAAISSALSAWKELPWVILEFSHLSISGKVFCTS 58
           A  L+ Y L+LE H H    +     AA ++ +       P +   F+ L I   +F ++
Sbjct: 261 ADTLATYLLMLEGHYHANVAYHNSLHAADVAQSTHVLLATPALEAVFTDLEILAALFASA 320

Query: 59  ----DFSRLNTFFL--------LFHKDT---PTHLLLSEFRLLLAQNIPIHFSPSVFHHT 103
               D   ++  FL        L + D      H L   F+LL A+N  I  + S     
Sbjct: 321 IHDVDHPGVSNQFLINTNSELALMYNDASVLENHHLAVGFKLLQAENCDIFQNLSAKQRL 380

Query: 104 GNYSVFDDMCFSVEKDRVFGEPDNPVATVLTDMVSMLAVILQYTYT 149
               +  DM  + +  +      +    V T  V+ L V+L   Y+
Sbjct: 381 SLRRMVIDMVLATDMSKHMNLLADLKTMVETKKVTSLGVLLLDNYS 426


>gi|149363646 phosphodiesterase 4C isoform PDE4C-3 [Homo sapiens]
          Length = 680

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 20/166 (12%)

Query: 4   ASNLSDYFLLLEDHIHCTPKF-----AAAISSALSAWKELPWVILEFSHLSISGKVFCTS 58
           A  L+ Y L+LE H H    +     AA ++ +       P +   F+ L I   +F ++
Sbjct: 335 ADTLATYLLMLEGHYHANVAYHNSLHAADVAQSTHVLLATPALEAVFTDLEILAALFASA 394

Query: 59  ----DFSRLNTFFL--------LFHKDT---PTHLLLSEFRLLLAQNIPIHFSPSVFHHT 103
               D   ++  FL        L + D      H L   F+LL A+N  I  + S     
Sbjct: 395 IHDVDHPGVSNQFLINTNSELALMYNDASVLENHHLAVGFKLLQAENCDIFQNLSAKQRL 454

Query: 104 GNYSVFDDMCFSVEKDRVFGEPDNPVATVLTDMVSMLAVILQYTYT 149
               +  DM  + +  +      +    V T  V+ L V+L   Y+
Sbjct: 455 SLRRMVIDMVLATDMSKHMNLLADLKTMVETKKVTSLGVLLLDNYS 500


>gi|115529445 phosphodiesterase 4C isoform PDE4C-1 [Homo sapiens]
          Length = 712

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 20/166 (12%)

Query: 4   ASNLSDYFLLLEDHIHCTPKF-----AAAISSALSAWKELPWVILEFSHLSISGKVFCTS 58
           A  L+ Y L+LE H H    +     AA ++ +       P +   F+ L I   +F ++
Sbjct: 367 ADTLATYLLMLEGHYHANVAYHNSLHAADVAQSTHVLLATPALEAVFTDLEILAALFASA 426

Query: 59  ----DFSRLNTFFL--------LFHKDT---PTHLLLSEFRLLLAQNIPIHFSPSVFHHT 103
               D   ++  FL        L + D      H L   F+LL A+N  I  + S     
Sbjct: 427 IHDVDHPGVSNQFLINTNSELALMYNDASVLENHHLAVGFKLLQAENCDIFQNLSAKQRL 486

Query: 104 GNYSVFDDMCFSVEKDRVFGEPDNPVATVLTDMVSMLAVILQYTYT 149
               +  DM  + +  +      +    V T  V+ L V+L   Y+
Sbjct: 487 SLRRMVIDMVLATDMSKHMNLLADLKTMVETKKVTSLGVLLLDNYS 532


>gi|110611156 laminin, gamma 3 precursor [Homo sapiens]
          Length = 1575

 Score = 28.5 bits (62), Expect = 5.6
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 12/66 (18%)

Query: 25   AAAISSALSAWKELPWVILEFSHLSISGKVFCTSDFSRLNTFFLLFHKDTPTHLLLSEFR 84
            AAAI ++L   +E P    ++SHL+   +    S            H+DT T +  + +R
Sbjct: 1132 AAAILASLEIPQEGPSQPTKWSHLATEARALARS------------HRDTATKIAATAWR 1179

Query: 85   LLLAQN 90
             LLA N
Sbjct: 1180 ALLASN 1185


>gi|28466983 leprecan-like 2 [Homo sapiens]
          Length = 736

 Score = 28.1 bits (61), Expect = 7.3
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 164 NYLTVILDRPQKNT-QIAVGRYRLQQGQVEPGYDPQED 200
           N L+V+L  P+    + A+ +Y+ Q G+  PG  P+ED
Sbjct: 338 NVLSVLLFYPEDEAAKRALNQYQAQLGEPRPGLGPRED 375


>gi|186910317 solute carrier family 12, member 3 isoform 2 [Homo
           sapiens]
          Length = 1029

 Score = 27.7 bits (60), Expect = 9.5
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 8/71 (11%)

Query: 164 NYLTVILDRPQKNTQIAVGRYR-------LQQGQVEPGYDPQEDPKSCARYALLGPLVGG 216
           +Y+ ++ D    N  + V R R       + Q  + P +DP ED K  +      P V G
Sbjct: 755 DYIGILHDAFDFNYGVCVMRMREGLNVSKMMQAHINPVFDPAEDGKEASARG-ARPSVSG 813

Query: 217 NLDQVVFSEEE 227
            LD     +EE
Sbjct: 814 ALDPKALVKEE 824


>gi|186910315 solute carrier family 12, member 3 isoform 1 [Homo
           sapiens]
          Length = 1030

 Score = 27.7 bits (60), Expect = 9.5
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 8/71 (11%)

Query: 164 NYLTVILDRPQKNTQIAVGRYR-------LQQGQVEPGYDPQEDPKSCARYALLGPLVGG 216
           +Y+ ++ D    N  + V R R       + Q  + P +DP ED K  +      P V G
Sbjct: 756 DYIGILHDAFDFNYGVCVMRMREGLNVSKMMQAHINPVFDPAEDGKEASARG-ARPSVSG 814

Query: 217 NLDQVVFSEEE 227
            LD     +EE
Sbjct: 815 ALDPKALVKEE 825


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,454,313
Number of Sequences: 37866
Number of extensions: 414030
Number of successful extensions: 697
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 683
Number of HSP's gapped (non-prelim): 17
length of query: 245
length of database: 18,247,518
effective HSP length: 100
effective length of query: 145
effective length of database: 14,460,918
effective search space: 2096833110
effective search space used: 2096833110
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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