BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239741432 PREDICTED: similar to hCG1811644 [Homo sapiens] (245 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239752981 PREDICTED: similar to hCG1811644 [Homo sapiens] 497 e-141 gi|239747558 PREDICTED: similar to hCG1811644 [Homo sapiens] 497 e-141 gi|239741432 PREDICTED: similar to hCG1811644 [Homo sapiens] 497 e-141 gi|166197698 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluc... 118 4e-27 gi|16915936 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluco... 70 2e-12 gi|7710152 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos... 70 2e-12 gi|237512959 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluc... 64 1e-10 gi|6912502 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos... 64 1e-10 gi|20302168 toll-like receptor 8 [Homo sapiens] 30 1.5 gi|10834994 interleukin 11 precursor [Homo sapiens] 30 1.9 gi|149363666 phosphodiesterase 4C isoform PDE4C-2 [Homo sapiens] 29 3.3 gi|149363646 phosphodiesterase 4C isoform PDE4C-3 [Homo sapiens] 29 3.3 gi|115529445 phosphodiesterase 4C isoform PDE4C-1 [Homo sapiens] 29 3.3 gi|110611156 laminin, gamma 3 precursor [Homo sapiens] 28 5.6 gi|28466983 leprecan-like 2 [Homo sapiens] 28 7.3 gi|186910317 solute carrier family 12, member 3 isoform 2 [Homo ... 28 9.5 gi|186910315 solute carrier family 12, member 3 isoform 1 [Homo ... 28 9.5 >gi|239752981 PREDICTED: similar to hCG1811644 [Homo sapiens] Length = 245 Score = 497 bits (1280), Expect = e-141 Identities = 245/245 (100%), Positives = 245/245 (100%) Query: 1 MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60 MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF Sbjct: 1 MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60 Query: 61 SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKDR 120 SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKDR Sbjct: 61 SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKDR 120 Query: 121 VFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKNTQIA 180 VFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKNTQIA Sbjct: 121 VFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKNTQIA 180 Query: 181 VGRYRLQQGQVEPGYDPQEDPKSCARYALLGPLVGGNLDQVVFSEEESVEQLNCIRLLVL 240 VGRYRLQQGQVEPGYDPQEDPKSCARYALLGPLVGGNLDQVVFSEEESVEQLNCIRLLVL Sbjct: 181 VGRYRLQQGQVEPGYDPQEDPKSCARYALLGPLVGGNLDQVVFSEEESVEQLNCIRLLVL 240 Query: 241 ASQES 245 ASQES Sbjct: 241 ASQES 245 >gi|239747558 PREDICTED: similar to hCG1811644 [Homo sapiens] Length = 245 Score = 497 bits (1280), Expect = e-141 Identities = 245/245 (100%), Positives = 245/245 (100%) Query: 1 MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60 MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF Sbjct: 1 MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60 Query: 61 SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKDR 120 SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKDR Sbjct: 61 SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKDR 120 Query: 121 VFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKNTQIA 180 VFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKNTQIA Sbjct: 121 VFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKNTQIA 180 Query: 181 VGRYRLQQGQVEPGYDPQEDPKSCARYALLGPLVGGNLDQVVFSEEESVEQLNCIRLLVL 240 VGRYRLQQGQVEPGYDPQEDPKSCARYALLGPLVGGNLDQVVFSEEESVEQLNCIRLLVL Sbjct: 181 VGRYRLQQGQVEPGYDPQEDPKSCARYALLGPLVGGNLDQVVFSEEESVEQLNCIRLLVL 240 Query: 241 ASQES 245 ASQES Sbjct: 241 ASQES 245 >gi|239741432 PREDICTED: similar to hCG1811644 [Homo sapiens] Length = 245 Score = 497 bits (1280), Expect = e-141 Identities = 245/245 (100%), Positives = 245/245 (100%) Query: 1 MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60 MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF Sbjct: 1 MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60 Query: 61 SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKDR 120 SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKDR Sbjct: 61 SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKDR 120 Query: 121 VFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKNTQIA 180 VFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKNTQIA Sbjct: 121 VFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKNTQIA 180 Query: 181 VGRYRLQQGQVEPGYDPQEDPKSCARYALLGPLVGGNLDQVVFSEEESVEQLNCIRLLVL 240 VGRYRLQQGQVEPGYDPQEDPKSCARYALLGPLVGGNLDQVVFSEEESVEQLNCIRLLVL Sbjct: 181 VGRYRLQQGQVEPGYDPQEDPKSCARYALLGPLVGGNLDQVVFSEEESVEQLNCIRLLVL 240 Query: 241 ASQES 245 ASQES Sbjct: 241 ASQES 245 >gi|166197698 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C [Homo sapiens] Length = 478 Score = 118 bits (296), Expect = 4e-27 Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 14/257 (5%) Query: 1 MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60 +NF +N SDY+++LED + C+ F AI +++ + WV LEFS L GK++ + D Sbjct: 210 LNFCANTSDYYVMLEDDVRCSKNFLTAIKKVIASLEGTYWVTLEFSKLGYIGKLYHSHDL 269 Query: 61 SRLNTFFLLFHKDTPTHLLLSEFRLLLAQNIPIHFSPSVFHHTGNYSVFDDMCFSVEKD- 119 RL F L+F+++ P LL+ FR LLAQ I F PS+F H G YS + ++ D Sbjct: 270 PRLAHFLLMFYQEMPCDWLLTHFRGLLAQKNVIRFKPSLFQHMGYYSSYKGTENKLKDDD 329 Query: 120 ---RVFGEPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYLTVILDRPQKN 176 F PDNP A++ T+M Y+ E + P G+ ++ + P Sbjct: 330 FEEESFDIPDNPPASLYTNMNVFENYEASKAYSSVDEYFWGKPPSTGDVFVIVFENPIII 389 Query: 177 TQIAVGRYR-------LQQGQVEPGYD--PQEDPKSCARYALLGPLVGGNLDQVVFSEEE 227 +I V L G ++ G + P + + C+ Y LG GN + +++ Sbjct: 390 KKIKVNTGTEDRQNDILHHGALDVGENVMPSKQRRQCSTYLRLGEFKNGNFEMSGVNQKI 449 Query: 228 SVEQLNCIRLLVLASQE 244 + ++C+R+ V +Q+ Sbjct: 450 PFD-IHCMRIYVTKTQK 465 >gi|16915936 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B isoform 2 [Homo sapiens] Length = 563 Score = 69.7 bits (169), Expect = 2e-12 Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 27/212 (12%) Query: 1 MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60 M +A + Y++ LED I P + + + + W+ILEFS L GK+F + D Sbjct: 268 MMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDL 327 Query: 61 SRLNTFFLLFHKDTPTHLLLSEFRLLLA--------------QNIPIHFSPSVFHHTGNY 106 S + F L+F++D P LL + N+ I F PS+F H G + Sbjct: 328 SLIVEFILMFYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTH 387 Query: 107 SVFDDMCFSVEKDRVFG------EPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNP 160 S + KD+ FG E NP A V T + + L+ Y L ++ + P Sbjct: 388 SSLAGKIQKL-KDKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAY-LREDFFWAFTP 445 Query: 161 LKGNYLTVILDRPQKNTQIAVGRYRLQQGQVE 192 G+++ +P + + R+ + G +E Sbjct: 446 AAGDFIRFRFFQP-----LRLERFFFRSGNIE 472 >gi|7710152 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B isoform 1 [Homo sapiens] Length = 548 Score = 69.7 bits (169), Expect = 2e-12 Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 27/212 (12%) Query: 1 MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60 M +A + Y++ LED I P + + + + W+ILEFS L GK+F + D Sbjct: 253 MMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDL 312 Query: 61 SRLNTFFLLFHKDTPTHLLLSEFRLLLA--------------QNIPIHFSPSVFHHTGNY 106 S + F L+F++D P LL + N+ I F PS+F H G + Sbjct: 313 SLIVEFILMFYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTH 372 Query: 107 SVFDDMCFSVEKDRVFG------EPDNPVATVLTDMVSMLAVILQYTYTLNKEGYSTLNP 160 S + KD+ FG E NP A V T + + L+ Y L ++ + P Sbjct: 373 SSLAGKIQKL-KDKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAY-LREDFFWAFTP 430 Query: 161 LKGNYLTVILDRPQKNTQIAVGRYRLQQGQVE 192 G+++ +P + + R+ + G +E Sbjct: 431 AAGDFIRFRFFQP-----LRLERFFFRSGNIE 457 >gi|237512959 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A isoform 2 [Homo sapiens] Length = 423 Score = 63.9 bits (154), Expect = 1e-10 Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 32/217 (14%) Query: 1 MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60 M +A Y++ LED I + I + W+ILEFS L GK+F D Sbjct: 118 MMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDL 177 Query: 61 SRLNTFFLLFHKDTPTHLLLSEFRLLLA--------------QNIPIHFSPSVFHHTGNY 106 + + F +F+K+ P LL + N+ I F PS+F H G + Sbjct: 178 TLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLH 237 Query: 107 SVFDDMCFSVEK--DRVFGEP------DNPVATVLTDMVSMLAVILQYTYTLNKEGYSTL 158 S + ++K D+ + +P NP A V T + L+ TY + ++ + + Sbjct: 238 S---SLSGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTY-MGEDFFWAI 293 Query: 159 NPLKGNYLTVILDRPQKNTQIAVGRYRLQQG-QVEPG 194 P+ G+Y+ D+P + V Y G Q PG Sbjct: 294 TPIAGDYILFKFDKP-----VNVESYLFHSGNQEHPG 325 >gi|6912502 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A isoform 1 [Homo sapiens] Length = 535 Score = 63.9 bits (154), Expect = 1e-10 Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 32/217 (14%) Query: 1 MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60 M +A Y++ LED I + I + W+ILEFS L GK+F D Sbjct: 246 MMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDL 305 Query: 61 SRLNTFFLLFHKDTPTHLLLSEFRLLLA--------------QNIPIHFSPSVFHHTGNY 106 + + F +F+K+ P LL + N+ I F PS+F H G + Sbjct: 306 TLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLH 365 Query: 107 SVFDDMCFSVEK--DRVFGEP------DNPVATVLTDMVSMLAVILQYTYTLNKEGYSTL 158 S + ++K D+ + +P NP A V T + L+ TY + ++ + + Sbjct: 366 S---SLSGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTY-MGEDFFWAI 421 Query: 159 NPLKGNYLTVILDRPQKNTQIAVGRYRLQQG-QVEPG 194 P+ G+Y+ D+P + V Y G Q PG Sbjct: 422 TPIAGDYILFKFDKP-----VNVESYLFHSGNQEHPG 453 >gi|20302168 toll-like receptor 8 [Homo sapiens] Length = 1041 Score = 30.4 bits (67), Expect = 1.5 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 11/102 (10%) Query: 76 THLLLSEFR-LLLAQNIPIHFSPSVFHHTGN-------YSVFDDMCFSVEKDRVFGEPDN 127 TH+ F+ L I ++ +P+V H GN ++ D +++ R DN Sbjct: 76 THITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELLLEDN 135 Query: 128 PVATV---LTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNYL 166 + + L + ++ L++I Y + KEG S L LK YL Sbjct: 136 QLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYL 177 >gi|10834994 interleukin 11 precursor [Homo sapiens] Length = 199 Score = 30.0 bits (66), Expect = 1.9 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 7/89 (7%) Query: 132 VLTDMVSMLAVILQYTYTLNKEGYSTLNPLKGNY--LTVILDRPQKNTQIAVGRYRLQQG 189 VLT + + L L++ L + G S+L L+ L LDR + Q+ + R L Q Sbjct: 93 VLTRLRADLLSYLRHVQWLRRAGGSSLKTLEPELGTLQARLDRLLRRLQLLMSRLALPQP 152 Query: 190 QVEPGYDPQEDPKSC-----ARYALLGPL 213 +P P P S A +A+LG L Sbjct: 153 PPDPPAPPLAPPSSAWGGIRAAHAILGGL 181 >gi|149363666 phosphodiesterase 4C isoform PDE4C-2 [Homo sapiens] Length = 606 Score = 29.3 bits (64), Expect = 3.3 Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 20/166 (12%) Query: 4 ASNLSDYFLLLEDHIHCTPKF-----AAAISSALSAWKELPWVILEFSHLSISGKVFCTS 58 A L+ Y L+LE H H + AA ++ + P + F+ L I +F ++ Sbjct: 261 ADTLATYLLMLEGHYHANVAYHNSLHAADVAQSTHVLLATPALEAVFTDLEILAALFASA 320 Query: 59 ----DFSRLNTFFL--------LFHKDT---PTHLLLSEFRLLLAQNIPIHFSPSVFHHT 103 D ++ FL L + D H L F+LL A+N I + S Sbjct: 321 IHDVDHPGVSNQFLINTNSELALMYNDASVLENHHLAVGFKLLQAENCDIFQNLSAKQRL 380 Query: 104 GNYSVFDDMCFSVEKDRVFGEPDNPVATVLTDMVSMLAVILQYTYT 149 + DM + + + + V T V+ L V+L Y+ Sbjct: 381 SLRRMVIDMVLATDMSKHMNLLADLKTMVETKKVTSLGVLLLDNYS 426 >gi|149363646 phosphodiesterase 4C isoform PDE4C-3 [Homo sapiens] Length = 680 Score = 29.3 bits (64), Expect = 3.3 Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 20/166 (12%) Query: 4 ASNLSDYFLLLEDHIHCTPKF-----AAAISSALSAWKELPWVILEFSHLSISGKVFCTS 58 A L+ Y L+LE H H + AA ++ + P + F+ L I +F ++ Sbjct: 335 ADTLATYLLMLEGHYHANVAYHNSLHAADVAQSTHVLLATPALEAVFTDLEILAALFASA 394 Query: 59 ----DFSRLNTFFL--------LFHKDT---PTHLLLSEFRLLLAQNIPIHFSPSVFHHT 103 D ++ FL L + D H L F+LL A+N I + S Sbjct: 395 IHDVDHPGVSNQFLINTNSELALMYNDASVLENHHLAVGFKLLQAENCDIFQNLSAKQRL 454 Query: 104 GNYSVFDDMCFSVEKDRVFGEPDNPVATVLTDMVSMLAVILQYTYT 149 + DM + + + + V T V+ L V+L Y+ Sbjct: 455 SLRRMVIDMVLATDMSKHMNLLADLKTMVETKKVTSLGVLLLDNYS 500 >gi|115529445 phosphodiesterase 4C isoform PDE4C-1 [Homo sapiens] Length = 712 Score = 29.3 bits (64), Expect = 3.3 Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 20/166 (12%) Query: 4 ASNLSDYFLLLEDHIHCTPKF-----AAAISSALSAWKELPWVILEFSHLSISGKVFCTS 58 A L+ Y L+LE H H + AA ++ + P + F+ L I +F ++ Sbjct: 367 ADTLATYLLMLEGHYHANVAYHNSLHAADVAQSTHVLLATPALEAVFTDLEILAALFASA 426 Query: 59 ----DFSRLNTFFL--------LFHKDT---PTHLLLSEFRLLLAQNIPIHFSPSVFHHT 103 D ++ FL L + D H L F+LL A+N I + S Sbjct: 427 IHDVDHPGVSNQFLINTNSELALMYNDASVLENHHLAVGFKLLQAENCDIFQNLSAKQRL 486 Query: 104 GNYSVFDDMCFSVEKDRVFGEPDNPVATVLTDMVSMLAVILQYTYT 149 + DM + + + + V T V+ L V+L Y+ Sbjct: 487 SLRRMVIDMVLATDMSKHMNLLADLKTMVETKKVTSLGVLLLDNYS 532 >gi|110611156 laminin, gamma 3 precursor [Homo sapiens] Length = 1575 Score = 28.5 bits (62), Expect = 5.6 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 12/66 (18%) Query: 25 AAAISSALSAWKELPWVILEFSHLSISGKVFCTSDFSRLNTFFLLFHKDTPTHLLLSEFR 84 AAAI ++L +E P ++SHL+ + S H+DT T + + +R Sbjct: 1132 AAAILASLEIPQEGPSQPTKWSHLATEARALARS------------HRDTATKIAATAWR 1179 Query: 85 LLLAQN 90 LLA N Sbjct: 1180 ALLASN 1185 >gi|28466983 leprecan-like 2 [Homo sapiens] Length = 736 Score = 28.1 bits (61), Expect = 7.3 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 164 NYLTVILDRPQKNT-QIAVGRYRLQQGQVEPGYDPQED 200 N L+V+L P+ + A+ +Y+ Q G+ PG P+ED Sbjct: 338 NVLSVLLFYPEDEAAKRALNQYQAQLGEPRPGLGPRED 375 >gi|186910317 solute carrier family 12, member 3 isoform 2 [Homo sapiens] Length = 1029 Score = 27.7 bits (60), Expect = 9.5 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 164 NYLTVILDRPQKNTQIAVGRYR-------LQQGQVEPGYDPQEDPKSCARYALLGPLVGG 216 +Y+ ++ D N + V R R + Q + P +DP ED K + P V G Sbjct: 755 DYIGILHDAFDFNYGVCVMRMREGLNVSKMMQAHINPVFDPAEDGKEASARG-ARPSVSG 813 Query: 217 NLDQVVFSEEE 227 LD +EE Sbjct: 814 ALDPKALVKEE 824 >gi|186910315 solute carrier family 12, member 3 isoform 1 [Homo sapiens] Length = 1030 Score = 27.7 bits (60), Expect = 9.5 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 8/71 (11%) Query: 164 NYLTVILDRPQKNTQIAVGRYR-------LQQGQVEPGYDPQEDPKSCARYALLGPLVGG 216 +Y+ ++ D N + V R R + Q + P +DP ED K + P V G Sbjct: 756 DYIGILHDAFDFNYGVCVMRMREGLNVSKMMQAHINPVFDPAEDGKEASARG-ARPSVSG 814 Query: 217 NLDQVVFSEEE 227 LD +EE Sbjct: 815 ALDPKALVKEE 825 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.322 0.137 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,454,313 Number of Sequences: 37866 Number of extensions: 414030 Number of successful extensions: 697 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 683 Number of HSP's gapped (non-prelim): 17 length of query: 245 length of database: 18,247,518 effective HSP length: 100 effective length of query: 145 effective length of database: 14,460,918 effective search space: 2096833110 effective search space used: 2096833110 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.