BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239508877 PREDICTED: hypothetical LOC100129126 [Homo sapiens] (190 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239754592 PREDICTED: hypothetical LOC100129126 [Homo sapiens] 384 e-107 gi|239749130 PREDICTED: hypothetical LOC100129126 [Homo sapiens] 384 e-107 gi|239743202 PREDICTED: hypothetical LOC100129126 [Homo sapiens] 384 e-107 gi|239508877 PREDICTED: hypothetical LOC100129126 [Homo sapiens] 384 e-107 gi|239748886 PREDICTED: similar to hCG1817096 [Homo sapiens] 68 4e-12 gi|239756558 PREDICTED: similar to vomeronasal 1 receptor, C3 [H... 63 1e-10 gi|169210430 PREDICTED: similar to vomeronasal 1 receptor, C3 [H... 63 1e-10 gi|239745522 PREDICTED: similar to vomeronasal 1 receptor, C3 [H... 63 1e-10 gi|195963403 zinc finger protein 720 [Homo sapiens] 52 4e-07 gi|190194429 zinc finger protein 267 [Homo sapiens] 50 1e-06 gi|169171772 PREDICTED: similar to hCG40110 [Homo sapiens] 48 4e-06 gi|169172289 PREDICTED: similar to hCG40110 [Homo sapiens] 48 4e-06 gi|169170082 PREDICTED: hypothetical protein LOC728927 [Homo sap... 48 4e-06 gi|169170430 PREDICTED: similar to hCG40110 [Homo sapiens] 48 4e-06 gi|22749241 zinc finger protein 540 [Homo sapiens] 48 4e-06 gi|226958478 zinc finger protein 727 [Homo sapiens] 47 8e-06 gi|239753095 PREDICTED: similar to hCG1725380 [Homo sapiens] 47 8e-06 gi|239747658 PREDICTED: similar to hCG1725380 [Homo sapiens] 47 8e-06 gi|239741529 PREDICTED: similar to hCG1725380 [Homo sapiens] 47 8e-06 gi|239508879 PREDICTED: similar to zinc finger protein 208 [Homo... 47 8e-06 gi|169213815 PREDICTED: similar to zinc finger protein 626 [Homo... 46 2e-05 gi|169214257 PREDICTED: similar to zinc finger protein 626 [Homo... 46 2e-05 gi|169213603 PREDICTED: similar to zinc finger protein 626 [Homo... 46 2e-05 gi|169212991 PREDICTED: similar to zinc finger protein 195 [Homo... 46 2e-05 gi|169213164 PREDICTED: similar to zinc finger protein 195 [Homo... 46 2e-05 gi|169212793 PREDICTED: similar to zinc finger protein 195 [Homo... 46 2e-05 gi|71361647 vomeronasal 1 receptor 4 [Homo sapiens] 46 2e-05 gi|37594442 zinc finger protein 140 [Homo sapiens] 46 2e-05 gi|226529227 zinc finger protein 716 [Homo sapiens] 45 3e-05 gi|224586910 zinc finger protein 679 [Homo sapiens] 45 3e-05 >gi|239754592 PREDICTED: hypothetical LOC100129126 [Homo sapiens] Length = 190 Score = 384 bits (986), Expect = e-107 Identities = 190/190 (100%), Positives = 190/190 (100%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQRALECEETEDSSQIPRMGRGGTVNTTSLFSDFHA 60 MLENYGNLVSLGLVISKPDLITLLEQRALECEETEDSSQIPRMGRGGTVNTTSLFSDFHA Sbjct: 1 MLENYGNLVSLGLVISKPDLITLLEQRALECEETEDSSQIPRMGRGGTVNTTSLFSDFHA 60 Query: 61 ITISVTQVVMLLAVVSLLSPGPMLLSSAYMVVLLLSHQKKSWYLHSTCLSPRPSPEQSAT 120 ITISVTQVVMLLAVVSLLSPGPMLLSSAYMVVLLLSHQKKSWYLHSTCLSPRPSPEQSAT Sbjct: 61 ITISVTQVVMLLAVVSLLSPGPMLLSSAYMVVLLLSHQKKSWYLHSTCLSPRPSPEQSAT 120 Query: 121 QTILLLYLQNIRHRPTRIPWVFLPRRLSSGNEADSHVHKDGWMLTSKRLMHNQWDTKENE 180 QTILLLYLQNIRHRPTRIPWVFLPRRLSSGNEADSHVHKDGWMLTSKRLMHNQWDTKENE Sbjct: 121 QTILLLYLQNIRHRPTRIPWVFLPRRLSSGNEADSHVHKDGWMLTSKRLMHNQWDTKENE 180 Query: 181 QGTHRGQEQD 190 QGTHRGQEQD Sbjct: 181 QGTHRGQEQD 190 >gi|239749130 PREDICTED: hypothetical LOC100129126 [Homo sapiens] Length = 190 Score = 384 bits (986), Expect = e-107 Identities = 190/190 (100%), Positives = 190/190 (100%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQRALECEETEDSSQIPRMGRGGTVNTTSLFSDFHA 60 MLENYGNLVSLGLVISKPDLITLLEQRALECEETEDSSQIPRMGRGGTVNTTSLFSDFHA Sbjct: 1 MLENYGNLVSLGLVISKPDLITLLEQRALECEETEDSSQIPRMGRGGTVNTTSLFSDFHA 60 Query: 61 ITISVTQVVMLLAVVSLLSPGPMLLSSAYMVVLLLSHQKKSWYLHSTCLSPRPSPEQSAT 120 ITISVTQVVMLLAVVSLLSPGPMLLSSAYMVVLLLSHQKKSWYLHSTCLSPRPSPEQSAT Sbjct: 61 ITISVTQVVMLLAVVSLLSPGPMLLSSAYMVVLLLSHQKKSWYLHSTCLSPRPSPEQSAT 120 Query: 121 QTILLLYLQNIRHRPTRIPWVFLPRRLSSGNEADSHVHKDGWMLTSKRLMHNQWDTKENE 180 QTILLLYLQNIRHRPTRIPWVFLPRRLSSGNEADSHVHKDGWMLTSKRLMHNQWDTKENE Sbjct: 121 QTILLLYLQNIRHRPTRIPWVFLPRRLSSGNEADSHVHKDGWMLTSKRLMHNQWDTKENE 180 Query: 181 QGTHRGQEQD 190 QGTHRGQEQD Sbjct: 181 QGTHRGQEQD 190 >gi|239743202 PREDICTED: hypothetical LOC100129126 [Homo sapiens] Length = 190 Score = 384 bits (986), Expect = e-107 Identities = 190/190 (100%), Positives = 190/190 (100%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQRALECEETEDSSQIPRMGRGGTVNTTSLFSDFHA 60 MLENYGNLVSLGLVISKPDLITLLEQRALECEETEDSSQIPRMGRGGTVNTTSLFSDFHA Sbjct: 1 MLENYGNLVSLGLVISKPDLITLLEQRALECEETEDSSQIPRMGRGGTVNTTSLFSDFHA 60 Query: 61 ITISVTQVVMLLAVVSLLSPGPMLLSSAYMVVLLLSHQKKSWYLHSTCLSPRPSPEQSAT 120 ITISVTQVVMLLAVVSLLSPGPMLLSSAYMVVLLLSHQKKSWYLHSTCLSPRPSPEQSAT Sbjct: 61 ITISVTQVVMLLAVVSLLSPGPMLLSSAYMVVLLLSHQKKSWYLHSTCLSPRPSPEQSAT 120 Query: 121 QTILLLYLQNIRHRPTRIPWVFLPRRLSSGNEADSHVHKDGWMLTSKRLMHNQWDTKENE 180 QTILLLYLQNIRHRPTRIPWVFLPRRLSSGNEADSHVHKDGWMLTSKRLMHNQWDTKENE Sbjct: 121 QTILLLYLQNIRHRPTRIPWVFLPRRLSSGNEADSHVHKDGWMLTSKRLMHNQWDTKENE 180 Query: 181 QGTHRGQEQD 190 QGTHRGQEQD Sbjct: 181 QGTHRGQEQD 190 >gi|239508877 PREDICTED: hypothetical LOC100129126 [Homo sapiens] Length = 190 Score = 384 bits (986), Expect = e-107 Identities = 190/190 (100%), Positives = 190/190 (100%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQRALECEETEDSSQIPRMGRGGTVNTTSLFSDFHA 60 MLENYGNLVSLGLVISKPDLITLLEQRALECEETEDSSQIPRMGRGGTVNTTSLFSDFHA Sbjct: 1 MLENYGNLVSLGLVISKPDLITLLEQRALECEETEDSSQIPRMGRGGTVNTTSLFSDFHA 60 Query: 61 ITISVTQVVMLLAVVSLLSPGPMLLSSAYMVVLLLSHQKKSWYLHSTCLSPRPSPEQSAT 120 ITISVTQVVMLLAVVSLLSPGPMLLSSAYMVVLLLSHQKKSWYLHSTCLSPRPSPEQSAT Sbjct: 61 ITISVTQVVMLLAVVSLLSPGPMLLSSAYMVVLLLSHQKKSWYLHSTCLSPRPSPEQSAT 120 Query: 121 QTILLLYLQNIRHRPTRIPWVFLPRRLSSGNEADSHVHKDGWMLTSKRLMHNQWDTKENE 180 QTILLLYLQNIRHRPTRIPWVFLPRRLSSGNEADSHVHKDGWMLTSKRLMHNQWDTKENE Sbjct: 121 QTILLLYLQNIRHRPTRIPWVFLPRRLSSGNEADSHVHKDGWMLTSKRLMHNQWDTKENE 180 Query: 181 QGTHRGQEQD 190 QGTHRGQEQD Sbjct: 181 QGTHRGQEQD 190 >gi|239748886 PREDICTED: similar to hCG1817096 [Homo sapiens] Length = 123 Score = 68.2 bits (165), Expect = 4e-12 Identities = 34/44 (77%), Positives = 35/44 (79%) Query: 83 MLLSSAYMVVLLLSHQKKSWYLHSTCLSPRPSPEQSATQTILLL 126 MLLSS MVVLL HQ K WY HST L PRPSPE+SATQTILLL Sbjct: 1 MLLSSTCMVVLLFRHQMKFWYFHSTSLFPRPSPEKSATQTILLL 44 >gi|239756558 PREDICTED: similar to vomeronasal 1 receptor, C3 [Homo sapiens] Length = 275 Score = 63.2 bits (152), Expect = 1e-10 Identities = 32/44 (72%), Positives = 37/44 (84%) Query: 83 MLLSSAYMVVLLLSHQKKSWYLHSTCLSPRPSPEQSATQTILLL 126 MLLS AYMV+LL H ++S +LHST LSPRPSPE+ ATQTILLL Sbjct: 169 MLLSRAYMVILLPRHWRQSQHLHSTHLSPRPSPEKRATQTILLL 212 >gi|169210430 PREDICTED: similar to vomeronasal 1 receptor, C3 [Homo sapiens] Length = 275 Score = 63.2 bits (152), Expect = 1e-10 Identities = 32/44 (72%), Positives = 37/44 (84%) Query: 83 MLLSSAYMVVLLLSHQKKSWYLHSTCLSPRPSPEQSATQTILLL 126 MLLS AYMV+LL H ++S +LHST LSPRPSPE+ ATQTILLL Sbjct: 169 MLLSRAYMVILLPRHWRQSQHLHSTHLSPRPSPEKRATQTILLL 212 >gi|239745522 PREDICTED: similar to vomeronasal 1 receptor, C3 [Homo sapiens] Length = 275 Score = 63.2 bits (152), Expect = 1e-10 Identities = 32/44 (72%), Positives = 37/44 (84%) Query: 83 MLLSSAYMVVLLLSHQKKSWYLHSTCLSPRPSPEQSATQTILLL 126 MLLS AYMV+LL H ++S +LHST LSPRPSPE+ ATQTILLL Sbjct: 169 MLLSRAYMVILLPRHWRQSQHLHSTHLSPRPSPEKRATQTILLL 212 >gi|195963403 zinc finger protein 720 [Homo sapiens] Length = 126 Score = 51.6 bits (122), Expect = 4e-07 Identities = 24/27 (88%), Positives = 25/27 (92%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQR 27 MLENYGNLVSLGL +SKPDLIT LEQR Sbjct: 33 MLENYGNLVSLGLAVSKPDLITFLEQR 59 >gi|190194429 zinc finger protein 267 [Homo sapiens] Length = 743 Score = 50.1 bits (118), Expect = 1e-06 Identities = 24/27 (88%), Positives = 25/27 (92%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQR 27 MLENY NLVSLGLV+SKPDLIT LEQR Sbjct: 33 MLENYRNLVSLGLVVSKPDLITFLEQR 59 >gi|169171772 PREDICTED: similar to hCG40110 [Homo sapiens] Length = 427 Score = 48.1 bits (113), Expect = 4e-06 Identities = 23/27 (85%), Positives = 24/27 (88%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQR 27 MLENYGNLVSLGL I KPDL+T LEQR Sbjct: 33 MLENYGNLVSLGLAIFKPDLMTCLEQR 59 >gi|169172289 PREDICTED: similar to hCG40110 [Homo sapiens] Length = 427 Score = 48.1 bits (113), Expect = 4e-06 Identities = 23/27 (85%), Positives = 24/27 (88%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQR 27 MLENYGNLVSLGL I KPDL+T LEQR Sbjct: 33 MLENYGNLVSLGLAIFKPDLMTCLEQR 59 >gi|169170082 PREDICTED: hypothetical protein LOC728927 [Homo sapiens] Length = 427 Score = 48.1 bits (113), Expect = 4e-06 Identities = 23/27 (85%), Positives = 24/27 (88%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQR 27 MLENYGNLVSLGL I KPDL+T LEQR Sbjct: 33 MLENYGNLVSLGLAIFKPDLMTCLEQR 59 >gi|169170430 PREDICTED: similar to hCG40110 [Homo sapiens] Length = 427 Score = 48.1 bits (113), Expect = 4e-06 Identities = 23/27 (85%), Positives = 24/27 (88%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQR 27 MLENYGNLVSLGL I KPDL+T LEQR Sbjct: 33 MLENYGNLVSLGLAIFKPDLMTCLEQR 59 >gi|22749241 zinc finger protein 540 [Homo sapiens] Length = 660 Score = 48.1 bits (113), Expect = 4e-06 Identities = 30/71 (42%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQRALECEETED--SSQIPRMGRGGTVNTTSLFSDF 58 MLENY NLVSLG SKPD+ITLLEQ C D Q P + S D Sbjct: 35 MLENYNNLVSLGYSGSKPDVITLLEQGKEPCVVARDVTGRQCPGLLSRHKTKKLSSEKDI 94 Query: 59 HAITISVTQVV 69 H I++S ++ Sbjct: 95 HEISLSKESII 105 >gi|226958478 zinc finger protein 727 [Homo sapiens] Length = 499 Score = 47.4 bits (111), Expect = 8e-06 Identities = 23/27 (85%), Positives = 23/27 (85%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQR 27 MLENYGNL SLGL I KPDLIT LEQR Sbjct: 33 MLENYGNLFSLGLAIFKPDLITYLEQR 59 >gi|239753095 PREDICTED: similar to hCG1725380 [Homo sapiens] Length = 583 Score = 47.4 bits (111), Expect = 8e-06 Identities = 22/27 (81%), Positives = 24/27 (88%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQR 27 MLENY NLVSLG+ +SKPDLIT LEQR Sbjct: 194 MLENYRNLVSLGIAVSKPDLITCLEQR 220 >gi|239747658 PREDICTED: similar to hCG1725380 [Homo sapiens] Length = 583 Score = 47.4 bits (111), Expect = 8e-06 Identities = 22/27 (81%), Positives = 24/27 (88%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQR 27 MLENY NLVSLG+ +SKPDLIT LEQR Sbjct: 194 MLENYRNLVSLGIAVSKPDLITCLEQR 220 >gi|239741529 PREDICTED: similar to hCG1725380 [Homo sapiens] Length = 583 Score = 47.4 bits (111), Expect = 8e-06 Identities = 22/27 (81%), Positives = 24/27 (88%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQR 27 MLENY NLVSLG+ +SKPDLIT LEQR Sbjct: 194 MLENYRNLVSLGIAVSKPDLITCLEQR 220 >gi|239508879 PREDICTED: similar to zinc finger protein 208 [Homo sapiens] Length = 1102 Score = 47.4 bits (111), Expect = 8e-06 Identities = 23/27 (85%), Positives = 23/27 (85%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQR 27 MLENYGNL SLGL I KPDLIT LEQR Sbjct: 472 MLENYGNLFSLGLAIFKPDLITYLEQR 498 Score = 43.1 bits (100), Expect = 1e-04 Identities = 21/26 (80%), Positives = 22/26 (84%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQ 26 MLENY NLVSLG+ SKPDLIT LEQ Sbjct: 88 MLENYRNLVSLGIADSKPDLITCLEQ 113 >gi|169213815 PREDICTED: similar to zinc finger protein 626 [Homo sapiens] Length = 138 Score = 46.2 bits (108), Expect = 2e-05 Identities = 21/26 (80%), Positives = 24/26 (92%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQ 26 MLENYGN+V LG+V+SKPDLIT LEQ Sbjct: 79 MLENYGNMVFLGIVVSKPDLITHLEQ 104 >gi|169214257 PREDICTED: similar to zinc finger protein 626 [Homo sapiens] Length = 138 Score = 46.2 bits (108), Expect = 2e-05 Identities = 21/26 (80%), Positives = 24/26 (92%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQ 26 MLENYGN+V LG+V+SKPDLIT LEQ Sbjct: 79 MLENYGNMVFLGIVVSKPDLITHLEQ 104 >gi|169213603 PREDICTED: similar to zinc finger protein 626 [Homo sapiens] Length = 138 Score = 46.2 bits (108), Expect = 2e-05 Identities = 21/26 (80%), Positives = 24/26 (92%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQ 26 MLENYGN+V LG+V+SKPDLIT LEQ Sbjct: 79 MLENYGNMVFLGIVVSKPDLITHLEQ 104 >gi|169212991 PREDICTED: similar to zinc finger protein 195 [Homo sapiens] Length = 55 Score = 45.8 bits (107), Expect = 2e-05 Identities = 21/27 (77%), Positives = 23/27 (85%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQR 27 MLENYGNL S+GL +SKP LIT LEQR Sbjct: 1 MLENYGNLFSIGLTVSKPGLITCLEQR 27 >gi|169213164 PREDICTED: similar to zinc finger protein 195 [Homo sapiens] Length = 55 Score = 45.8 bits (107), Expect = 2e-05 Identities = 21/27 (77%), Positives = 23/27 (85%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQR 27 MLENYGNL S+GL +SKP LIT LEQR Sbjct: 1 MLENYGNLFSIGLTVSKPGLITCLEQR 27 >gi|169212793 PREDICTED: similar to zinc finger protein 195 [Homo sapiens] Length = 55 Score = 45.8 bits (107), Expect = 2e-05 Identities = 21/27 (77%), Positives = 23/27 (85%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQR 27 MLENYGNL S+GL +SKP LIT LEQR Sbjct: 1 MLENYGNLFSIGLTVSKPGLITCLEQR 27 >gi|71361647 vomeronasal 1 receptor 4 [Homo sapiens] Length = 301 Score = 45.8 bits (107), Expect = 2e-05 Identities = 27/64 (42%), Positives = 40/64 (62%) Query: 63 ISVTQVVMLLAVVSLLSPGPMLLSSAYMVVLLLSHQKKSWYLHSTCLSPRPSPEQSATQT 122 I+ T MLL+ +L G ML S+ MV +L H+++ ++ + LSPR SPE ATQ+ Sbjct: 175 IAQTLRAMLLSFPDVLCLGLMLWVSSSMVCILHRHKQRVQHIDRSNLSPRASPENRATQS 234 Query: 123 ILLL 126 IL+L Sbjct: 235 ILIL 238 Score = 27.7 bits (60), Expect = 6.2 Identities = 12/23 (52%), Positives = 16/23 (69%) Query: 42 RMGRGGTVNTTSLFSDFHAITIS 64 R+GRG ++ TT L S F IT+S Sbjct: 88 RVGRGVSIGTTCLLSVFQVITVS 110 >gi|37594442 zinc finger protein 140 [Homo sapiens] Length = 457 Score = 45.8 bits (107), Expect = 2e-05 Identities = 21/26 (80%), Positives = 25/26 (96%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQ 26 MLENYG+LVSLGL ISKPD+++LLEQ Sbjct: 35 MLENYGHLVSLGLSISKPDVVSLLEQ 60 >gi|226529227 zinc finger protein 716 [Homo sapiens] Length = 495 Score = 45.4 bits (106), Expect = 3e-05 Identities = 21/26 (80%), Positives = 23/26 (88%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQ 26 MLENY NLVSLG+ +SKPDLIT LEQ Sbjct: 45 MLENYRNLVSLGIAVSKPDLITCLEQ 70 >gi|224586910 zinc finger protein 679 [Homo sapiens] Length = 411 Score = 45.4 bits (106), Expect = 3e-05 Identities = 21/26 (80%), Positives = 23/26 (88%) Query: 1 MLENYGNLVSLGLVISKPDLITLLEQ 26 MLENY NLVSLG+ +SKPDLIT LEQ Sbjct: 45 MLENYRNLVSLGIAVSKPDLITCLEQ 70 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.131 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,671,181 Number of Sequences: 37866 Number of extensions: 332046 Number of successful extensions: 1168 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 290 Number of HSP's successfully gapped in prelim test: 28 Number of HSP's that attempted gapping in prelim test: 861 Number of HSP's gapped (non-prelim): 327 length of query: 190 length of database: 18,247,518 effective HSP length: 96 effective length of query: 94 effective length of database: 14,612,382 effective search space: 1373563908 effective search space used: 1373563908 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.