Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239048390
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239048390 transcription factor MAFF isoform b [Homo sapiens]
(135 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239048390 transcription factor MAFF isoform b [Homo sapiens] 266 4e-72
gi|239048388 transcription factor MAFF isoform a [Homo sapiens] 266 4e-72
gi|239048350 transcription factor MAFF isoform a [Homo sapiens] 266 4e-72
gi|6912490 transcription factor MAFF isoform a [Homo sapiens] 266 4e-72
gi|4505075 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 159 8e-40
gi|4505073 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 152 8e-38
gi|49619228 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 152 8e-38
gi|23308699 transcription factor MAFB [Homo sapiens] 100 4e-22
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 94 3e-20
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 94 3e-20
gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 91 3e-19
gi|5453802 neural retina leucine zipper [Homo sapiens] 84 3e-17
gi|4885243 FOS-like antigen 1 [Homo sapiens] 47 5e-06
gi|118640873 X-box binding protein 1 isoform XBP1(S) [Homo sapiens] 40 6e-04
gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo sapi... 40 6e-04
gi|14110395 X-box binding protein 1 isoform XBP1(U) [Homo sapiens] 39 0.001
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 36 0.008
gi|4885245 FOS-like antigen 2 [Homo sapiens] 36 0.011
gi|209954788 activating transcription factor 6 beta isoform b [H... 36 0.011
gi|20631977 activating transcription factor 6 beta isoform a [Ho... 36 0.011
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 35 0.014
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 35 0.014
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 35 0.014
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 35 0.014
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 35 0.014
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 35 0.014
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 35 0.014
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 35 0.014
gi|194294523 intersectin 2 isoform 3 [Homo sapiens] 35 0.014
gi|194294521 intersectin 2 isoform 1 [Homo sapiens] 35 0.014
>gi|239048390 transcription factor MAFF isoform b [Homo sapiens]
Length = 135
Score = 266 bits (680), Expect = 4e-72
Identities = 135/135 (100%), Positives = 135/135 (100%)
Query: 1 MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELERE 60
MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELERE
Sbjct: 1 MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELERE 60
Query: 61 VDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSG 120
VDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSG
Sbjct: 61 VDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSG 120
Query: 121 PAHGPDPAHGPASCS 135
PAHGPDPAHGPASCS
Sbjct: 121 PAHGPDPAHGPASCS 135
>gi|239048388 transcription factor MAFF isoform a [Homo sapiens]
Length = 164
Score = 266 bits (680), Expect = 4e-72
Identities = 135/135 (100%), Positives = 135/135 (100%)
Query: 1 MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELERE 60
MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELERE
Sbjct: 30 MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELERE 89
Query: 61 VDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSG 120
VDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSG
Sbjct: 90 VDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSG 149
Query: 121 PAHGPDPAHGPASCS 135
PAHGPDPAHGPASCS
Sbjct: 150 PAHGPDPAHGPASCS 164
>gi|239048350 transcription factor MAFF isoform a [Homo sapiens]
Length = 164
Score = 266 bits (680), Expect = 4e-72
Identities = 135/135 (100%), Positives = 135/135 (100%)
Query: 1 MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELERE 60
MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELERE
Sbjct: 30 MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELERE 89
Query: 61 VDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSG 120
VDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSG
Sbjct: 90 VDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSG 149
Query: 121 PAHGPDPAHGPASCS 135
PAHGPDPAHGPASCS
Sbjct: 150 PAHGPDPAHGPASCS 164
>gi|6912490 transcription factor MAFF isoform a [Homo sapiens]
Length = 164
Score = 266 bits (680), Expect = 4e-72
Identities = 135/135 (100%), Positives = 135/135 (100%)
Query: 1 MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELERE 60
MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELERE
Sbjct: 30 MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELERE 89
Query: 61 VDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSG 120
VDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSG
Sbjct: 90 VDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSG 149
Query: 121 PAHGPDPAHGPASCS 135
PAHGPDPAHGPASCS
Sbjct: 150 PAHGPDPAHGPASCS 164
>gi|4505075 v-maf musculoaponeurotic fibrosarcoma oncogene homolog K
[Homo sapiens]
Length = 156
Score = 159 bits (401), Expect = 8e-40
Identities = 83/114 (72%), Positives = 98/114 (85%)
Query: 1 MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELERE 60
+ +SVRELN+HLRGL+ EEVTRLKQRRRTLKNRGYAASCR+KRV QKEEL++Q+ EL++E
Sbjct: 30 VSMSVRELNQHLRGLTKEEVTRLKQRRRTLKNRGYAASCRIKRVTQKEELERQRVELQQE 89
Query: 61 VDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKST 114
V+KLAREN++MRLELDALR K EALQ FAR+VA + VA SVITIVKST
Sbjct: 90 VEKLARENSSMRLELDALRSKYEALQTFARTVARGPVAPSKVATTSVITIVKST 143
>gi|4505073 v-maf musculoaponeurotic fibrosarcoma oncogene homolog G
[Homo sapiens]
Length = 162
Score = 152 bits (384), Expect = 8e-38
Identities = 86/125 (68%), Positives = 98/125 (78%), Gaps = 14/125 (11%)
Query: 3 LSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVD 62
+SVRELN+HLRGLS EE+ +LKQRRRTLKNRGYAASCRVKRV QKEEL+KQK+EL++EV+
Sbjct: 32 MSVRELNQHLRGLSKEEIVQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVE 91
Query: 63 KLARENAAMRLELDALRGKCEALQGFARS-----VAAARGPATL---------VAPASVI 108
KLA ENA+M+LELDALR K EALQ FAR+ VA ARGP VA SVI
Sbjct: 92 KLASENASMKLELDALRSKYEALQTFARTVARSPVAPARGPLAAGLGPLVPGKVAATSVI 151
Query: 109 TIVKS 113
TIVKS
Sbjct: 152 TIVKS 156
>gi|49619228 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
G [Homo sapiens]
Length = 162
Score = 152 bits (384), Expect = 8e-38
Identities = 86/125 (68%), Positives = 98/125 (78%), Gaps = 14/125 (11%)
Query: 3 LSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVD 62
+SVRELN+HLRGLS EE+ +LKQRRRTLKNRGYAASCRVKRV QKEEL+KQK+EL++EV+
Sbjct: 32 MSVRELNQHLRGLSKEEIVQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVE 91
Query: 63 KLARENAAMRLELDALRGKCEALQGFARS-----VAAARGPATL---------VAPASVI 108
KLA ENA+M+LELDALR K EALQ FAR+ VA ARGP VA SVI
Sbjct: 92 KLASENASMKLELDALRSKYEALQTFARTVARSPVAPARGPLAAGLGPLVPGKVAATSVI 151
Query: 109 TIVKS 113
TIVKS
Sbjct: 152 TIVKS 156
>gi|23308699 transcription factor MAFB [Homo sapiens]
Length = 323
Score = 100 bits (249), Expect = 4e-22
Identities = 51/102 (50%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
Query: 1 MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELERE 60
+ +SVRELNRHLRG + +EV RLKQ+RRTLKNRGYA SCR KRV QK L+ +K++L ++
Sbjct: 217 VSMSVRELNRHLRGFTKDEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQ 276
Query: 61 VDKLARENAAMRLELDALRGKCEAL--QGFARSVAAARGPAT 100
V++L +E + + E DA + KCE L GF + + + P++
Sbjct: 277 VEQLKQEVSRLARERDAYKVKCEKLANSGFREAGSTSDSPSS 318
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 94.4 bits (233), Expect = 3e-20
Identities = 51/100 (51%), Positives = 71/100 (71%), Gaps = 2/100 (2%)
Query: 3 LSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVD 62
+SVRELNR LRG+S EEV RLKQ+RRTLKNRGYA SCR KRV Q+ L+ +K++L ++VD
Sbjct: 269 MSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKNQLLQQVD 328
Query: 63 KLARENAAMRLELDALRGKCEAL--QGFARSVAAARGPAT 100
L +E + + E DA + K E L GF + +++ P++
Sbjct: 329 HLKQEISRLVRERDAYKEKYEKLVSSGFRENGSSSDNPSS 368
>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform a [Homo sapiens]
Length = 403
Score = 94.4 bits (233), Expect = 3e-20
Identities = 51/100 (51%), Positives = 71/100 (71%), Gaps = 2/100 (2%)
Query: 3 LSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVD 62
+SVRELNR LRG+S EEV RLKQ+RRTLKNRGYA SCR KRV Q+ L+ +K++L ++VD
Sbjct: 269 MSVRELNRQLRGVSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKNQLLQQVD 328
Query: 63 KLARENAAMRLELDALRGKCEAL--QGFARSVAAARGPAT 100
L +E + + E DA + K E L GF + +++ P++
Sbjct: 329 HLKQEISRLVRERDAYKEKYEKLVSSGFRENGSSSDNPSS 368
>gi|71274111 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
A [Homo sapiens]
Length = 353
Score = 90.9 bits (224), Expect = 3e-19
Identities = 58/132 (43%), Positives = 72/132 (54%), Gaps = 15/132 (11%)
Query: 1 MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELERE 60
+ +SVRELNR LRG S EEV RLKQ+RRTLKNRGYA SCR KRV Q+ L+ +K +L+ +
Sbjct: 233 VSMSVRELNRQLRGFSKEEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHILESEKCQLQSQ 292
Query: 61 VDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSG 120
V++L E + E D + K E L G R + G A P S
Sbjct: 293 VEQLKLEVGRLAKERDLYKEKYEKLAG--RGGPGSAGGA-------------GFPREPSP 337
Query: 121 PAHGPDPAHGPA 132
P GP A G A
Sbjct: 338 PQAGPGGAKGTA 349
>gi|5453802 neural retina leucine zipper [Homo sapiens]
Length = 237
Score = 84.3 bits (207), Expect = 3e-17
Identities = 41/85 (48%), Positives = 57/85 (67%)
Query: 1 MGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELERE 60
+ +SVRELNR LRG +E RLKQRRRTLKNRGYA +CR KR+ Q+ L+ +++ L +
Sbjct: 138 VSMSVRELNRQLRGCGRDEALRLKQRRRTLKNRGYAQACRSKRLQQRRGLEAERARLAAQ 197
Query: 61 VDKLARENAAMRLELDALRGKCEAL 85
+D L E A + E D + +C+ L
Sbjct: 198 LDALRAEVARLARERDLYKARCDRL 222
>gi|4885243 FOS-like antigen 1 [Homo sapiens]
Length = 271
Score = 47.0 bits (110), Expect = 5e-06
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 14/125 (11%)
Query: 15 LSAEEVTRLKQRRRTLKNRGYAASCRVKRV-------CQKEELQKQKSELEREVDKLARE 67
+S EE R + RR +N+ AA CR +R + ++L+ +KS L+RE+++L ++
Sbjct: 100 ISPEEEERRRVRRE--RNKLAAAKCRNRRKELTDFLQAETDKLEDEKSGLQREIEELQKQ 157
Query: 68 NAAMRLELDALRGKCEALQGFAR-SVAAARGPATLVAPASVITIVKSTPGSGSGPAHGPD 126
+ L L+A R C+ +G + G ++ AP + + +P GP P+
Sbjct: 158 KERLELVLEAHRPICKIPEGAKEGDTGSTSGTSSPPAPCRPVPCISLSP----GPVLEPE 213
Query: 127 PAHGP 131
H P
Sbjct: 214 ALHTP 218
>gi|118640873 X-box binding protein 1 isoform XBP1(S) [Homo sapiens]
Length = 376
Score = 40.0 bits (92), Expect = 6e-04
Identities = 42/137 (30%), Positives = 57/137 (41%), Gaps = 18/137 (13%)
Query: 2 GLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREV 61
GL + L LS EE K RR LKNR A + R ++ + EL++Q +LE E
Sbjct: 54 GLPQARKRQRLTHLSPEE----KALRRKLKNRVAAQTARDRKKARMSELEQQVVDLEEEN 109
Query: 62 DKLARENAAMR-------LELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKST 114
KL EN +R +E LR + A A A+G S +
Sbjct: 110 QKLLLENQLLREKTHGLVVENQELRQRLGMDALVAEEEAEAKGNEVRPVAGS------AE 163
Query: 115 PGSGSGPAHGPDPAHGP 131
+G+GP P P H P
Sbjct: 164 SAAGAGPVVTP-PEHLP 179
>gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo
sapiens]
Length = 1002
Score = 40.0 bits (92), Expect = 6e-04
Identities = 25/79 (31%), Positives = 39/79 (49%)
Query: 5 VRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVDKL 64
V EL R L +S ++ + + K R K E+L+++KSELE ++ L
Sbjct: 265 VGELERALSAVSTQQKKADRYNKELTKERDALRLELYKNTQSNEDLKQEKSELEEKLRVL 324
Query: 65 ARENAAMRLELDALRGKCE 83
E A M+L L+ L+ K E
Sbjct: 325 VTEKAGMQLNLEELQKKLE 343
>gi|14110395 X-box binding protein 1 isoform XBP1(U) [Homo sapiens]
Length = 261
Score = 39.3 bits (90), Expect = 0.001
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 2 GLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREV 61
GL + L LS EE K RR LKNR A + R ++ + EL++Q +LE E
Sbjct: 54 GLPQARKRQRLTHLSPEE----KALRRKLKNRVAAQTARDRKKARMSELEQQVVDLEEEN 109
Query: 62 DKLARENAAMR 72
KL EN +R
Sbjct: 110 QKLLLENQLLR 120
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 36.2 bits (82), Expect = 0.008
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 29 TLKNRGYAASCRVKRVCQKEELQKQKSELEREVDKLARENAAMRLELDALRGKCEAL 85
TL++ AA+ R K+ EL +Q L+R KL +E + +++E+D + EAL
Sbjct: 1186 TLQHEATAATLRKKQADSVAELGEQIDNLQRVKQKLEKEKSELKMEIDDMASNIEAL 1242
Score = 28.9 bits (63), Expect = 1.3
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 47 KEELQKQKSELEREVDKLARENAAMRLELDALRGKCEALQ 86
K++L+K+KSEL+ E+D +A A+ + C ++
Sbjct: 1218 KQKLEKEKSELKMEIDDMASNIEALSKSKSNIERTCRTVE 1257
>gi|4885245 FOS-like antigen 2 [Homo sapiens]
Length = 326
Score = 35.8 bits (81), Expect = 0.011
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 17/107 (15%)
Query: 15 LSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVDKLARENAAMRLE 74
LS EE + + RR +N+ AA CR +R E+LQ + ELE E L +E A ++ E
Sbjct: 119 LSPEEEEKRRIRRE--RNKLAAAKCRNRRRELTEKLQAETEELEEEKSGLQKEIAELQKE 176
Query: 75 LDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSGP 121
+ L + A GP ++P +S P G P
Sbjct: 177 KEKL-----------EFMLVAHGPVCKISPEE----RRSPPAPGLQP 208
>gi|209954788 activating transcription factor 6 beta isoform b [Homo
sapiens]
Length = 700
Score = 35.8 bits (81), Expect = 0.011
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 29/134 (21%)
Query: 23 LKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREV---DKLARENAAMRLELDAL- 78
LK+++R +KNR A R K+ KE LQ ++ L+ + +L RENAA+R L+AL
Sbjct: 323 LKRQQRMIKNRESACQSRRKK---KEYLQGLEARLQAVLADNQQLRRENAALRRRLEALL 379
Query: 79 -----------RGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPG----------- 116
K + F +A GP ++ P S + G
Sbjct: 380 AENSELKLGSGNRKVVCIMVFLLFIAFNFGPVSISEPPSAPISPRMNKGEPQPRRHLLGF 439
Query: 117 SGSGPAHGPDPAHG 130
S P G +P G
Sbjct: 440 SEQEPVQGVEPLQG 453
>gi|20631977 activating transcription factor 6 beta isoform a [Homo
sapiens]
Length = 703
Score = 35.8 bits (81), Expect = 0.011
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 29/134 (21%)
Query: 23 LKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREV---DKLARENAAMRLELDAL- 78
LK+++R +KNR A R K+ KE LQ ++ L+ + +L RENAA+R L+AL
Sbjct: 326 LKRQQRMIKNRESACQSRRKK---KEYLQGLEARLQAVLADNQQLRRENAALRRRLEALL 382
Query: 79 -----------RGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPG----------- 116
K + F +A GP ++ P S + G
Sbjct: 383 AENSELKLGSGNRKVVCIMVFLLFIAFNFGPVSISEPPSAPISPRMNKGEPQPRRHLLGF 442
Query: 117 SGSGPAHGPDPAHG 130
S P G +P G
Sbjct: 443 SEQEPVQGVEPLQG 456
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 35.4 bits (80), Expect = 0.014
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 5 VRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVDKL 64
+RE + + +E RL + R + A V+R ++EELQ+ + + ++ + L
Sbjct: 2530 LREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRR--KQEELQQLEQQRRQQEELL 2587
Query: 65 ARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSGPAHG 124
A EN +R +L L + A + V A++ AT P + GPA
Sbjct: 2588 AEENQRLREQLQLLEEQHRAALAHSEEVTASQVAATKTLPNGRDAL--------DGPAAE 2639
Query: 125 PDPAH 129
+P H
Sbjct: 2640 AEPEH 2644
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 35.4 bits (80), Expect = 0.014
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 5 VRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVDKL 64
+RE + + +E RL + R + A V+R ++EELQ+ + + ++ + L
Sbjct: 2534 LREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRR--KQEELQQLEQQRRQQEELL 2591
Query: 65 ARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSGPAHG 124
A EN +R +L L + A + V A++ AT P + GPA
Sbjct: 2592 AEENQRLREQLQLLEEQHRAALAHSEEVTASQVAATKTLPNGRDAL--------DGPAAE 2643
Query: 125 PDPAH 129
+P H
Sbjct: 2644 AEPEH 2648
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 35.4 bits (80), Expect = 0.014
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 5 VRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVDKL 64
+RE + + +E RL + R + A V+R ++EELQ+ + + ++ + L
Sbjct: 2530 LREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRR--KQEELQQLEQQRRQQEELL 2587
Query: 65 ARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSGPAHG 124
A EN +R +L L + A + V A++ AT P + GPA
Sbjct: 2588 AEENQRLREQLQLLEEQHRAALAHSEEVTASQVAATKTLPNGRDAL--------DGPAAE 2639
Query: 125 PDPAH 129
+P H
Sbjct: 2640 AEPEH 2644
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 35.4 bits (80), Expect = 0.014
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 5 VRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVDKL 64
+RE + + +E RL + R + A V+R ++EELQ+ + + ++ + L
Sbjct: 2498 LREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRR--KQEELQQLEQQRRQQEELL 2555
Query: 65 ARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSGPAHG 124
A EN +R +L L + A + V A++ AT P + GPA
Sbjct: 2556 AEENQRLREQLQLLEEQHRAALAHSEEVTASQVAATKTLPNGRDAL--------DGPAAE 2607
Query: 125 PDPAH 129
+P H
Sbjct: 2608 AEPEH 2612
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 35.4 bits (80), Expect = 0.014
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 5 VRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVDKL 64
+RE + + +E RL + R + A V+R ++EELQ+ + + ++ + L
Sbjct: 2667 LREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRR--KQEELQQLEQQRRQQEELL 2724
Query: 65 ARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSGPAHG 124
A EN +R +L L + A + V A++ AT P + GPA
Sbjct: 2725 AEENQRLREQLQLLEEQHRAALAHSEEVTASQVAATKTLPNGRDAL--------DGPAAE 2776
Query: 125 PDPAH 129
+P H
Sbjct: 2777 AEPEH 2781
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 35.4 bits (80), Expect = 0.014
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 5 VRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVDKL 64
+RE + + +E RL + R + A V+R ++EELQ+ + + ++ + L
Sbjct: 2508 LREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRR--KQEELQQLEQQRRQQEELL 2565
Query: 65 ARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSGPAHG 124
A EN +R +L L + A + V A++ AT P + GPA
Sbjct: 2566 AEENQRLREQLQLLEEQHRAALAHSEEVTASQVAATKTLPNGRDAL--------DGPAAE 2617
Query: 125 PDPAH 129
+P H
Sbjct: 2618 AEPEH 2622
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 35.4 bits (80), Expect = 0.014
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 5 VRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVDKL 64
+RE + + +E RL + R + A V+R ++EELQ+ + + ++ + L
Sbjct: 2516 LREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRR--KQEELQQLEQQRRQQEELL 2573
Query: 65 ARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSGPAHG 124
A EN +R +L L + A + V A++ AT P + GPA
Sbjct: 2574 AEENQRLREQLQLLEEQHRAALAHSEEVTASQVAATKTLPNGRDAL--------DGPAAE 2625
Query: 125 PDPAH 129
+P H
Sbjct: 2626 AEPEH 2630
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 35.4 bits (80), Expect = 0.014
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 5 VRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVDKL 64
+RE + + +E RL + R + A V+R ++EELQ+ + + ++ + L
Sbjct: 2557 LREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRR--KQEELQQLEQQRRQQEELL 2614
Query: 65 ARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIVKSTPGSGSGPAHG 124
A EN +R +L L + A + V A++ AT P + GPA
Sbjct: 2615 AEENQRLREQLQLLEEQHRAALAHSEEVTASQVAATKTLPNGRDAL--------DGPAAE 2666
Query: 125 PDPAH 129
+P H
Sbjct: 2667 AEPEH 2671
>gi|194294523 intersectin 2 isoform 3 [Homo sapiens]
Length = 1670
Score = 35.4 bits (80), Expect = 0.014
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 6 RELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVDKLA 65
REL R +++ R + ++ L+ + R++R +EL QK+ + E+ +L
Sbjct: 430 RELERQREEERRKDIERREAAKQELERQRRLEWERIRR----QELLNQKNREQEEIVRLN 485
Query: 66 RENAAMRLELDALRGKCEALQGFARSV 92
+ + LEL+AL GK + + G + V
Sbjct: 486 SKKKNLHLELEALNGKHQQISGRLQDV 512
>gi|194294521 intersectin 2 isoform 1 [Homo sapiens]
Length = 1697
Score = 35.4 bits (80), Expect = 0.014
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 6 RELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRVKRVCQKEELQKQKSELEREVDKLA 65
REL R +++ R + ++ L+ + R++R +EL QK+ + E+ +L
Sbjct: 430 RELERQREEERRKDIERREAAKQELERQRRLEWERIRR----QELLNQKNREQEEIVRLN 485
Query: 66 RENAAMRLELDALRGKCEALQGFARSV 92
+ + LEL+AL GK + + G + V
Sbjct: 486 SKKKNLHLELEALNGKHQQISGRLQDV 512
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.129 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,607,522
Number of Sequences: 37866
Number of extensions: 249754
Number of successful extensions: 3487
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 234
Number of HSP's that attempted gapping in prelim test: 2555
Number of HSP's gapped (non-prelim): 1122
length of query: 135
length of database: 18,247,518
effective HSP length: 91
effective length of query: 44
effective length of database: 14,801,712
effective search space: 651275328
effective search space used: 651275328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.