Search of human proteins with 237512959

Search of human proteins with 237512959

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|237512959 alpha-1,3-mannosyl-glycoprotein
4-beta-N-acetylglucosaminyltransferase A isoform 2 [Homo sapiens]
         (423 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237512959 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluc...   861   0.0  
gi|6912502 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos...   797   0.0  
gi|16915936 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluco...   540   e-154
gi|7710152 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucos...   540   e-154
gi|166197698 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylgluc...   226   2e-59
gi|239752981 PREDICTED: similar to hCG1811644 [Homo sapiens]           64   3e-10
gi|239747558 PREDICTED: similar to hCG1811644 [Homo sapiens]           64   3e-10
gi|239741432 PREDICTED: similar to hCG1811644 [Homo sapiens]           64   3e-10
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho...    31   1.9  
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho...    31   1.9  
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho...    31   1.9  
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho...    31   1.9  
gi|94721321 coiled-coil domain containing 11 [Homo sapiens]            30   3.2  
gi|22748701 zinc finger protein 641 [Homo sapiens]                     30   5.4  
gi|170763519 transforming, acidic coiled-coil containing protein...    29   9.2  
gi|170763517 transforming, acidic coiled-coil containing protein...    29   9.2  
gi|226246618 transforming, acidic coiled-coil containing protein...    29   9.2  

>gi|237512959 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase A isoform 2 [Homo
           sapiens]
          Length = 423

 Score =  861 bits (2224), Expect = 0.0
 Identities = 423/423 (100%), Positives = 423/423 (100%)

Query: 1   MNYSITVSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGV 60
           MNYSITVSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGV
Sbjct: 1   MNYSITVSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGV 60

Query: 61  VANLEKEFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMY 120
           VANLEKEFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMY
Sbjct: 61  VANLEKEFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMY 120

Query: 121 AQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLI 180
           AQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLI
Sbjct: 121 AQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLI 180

Query: 181 VEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSL 240
           VEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSL
Sbjct: 181 VEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSL 240

Query: 241 SGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPIAGDY 300
           SGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPIAGDY
Sbjct: 241 SGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPIAGDY 300

Query: 301 ILFKFDKPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKSEGLEISKETKDKRLEDGYFR 360
           ILFKFDKPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKSEGLEISKETKDKRLEDGYFR
Sbjct: 301 ILFKFDKPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKSEGLEISKETKDKRLEDGYFR 360

Query: 361 IGKFENGVAEGMVDPSLNPISAFRLSVIQNSAVWAILNEQRVFSGWWQKSRDKAEGPQAP 420
           IGKFENGVAEGMVDPSLNPISAFRLSVIQNSAVWAILNEQRVFSGWWQKSRDKAEGPQAP
Sbjct: 361 IGKFENGVAEGMVDPSLNPISAFRLSVIQNSAVWAILNEQRVFSGWWQKSRDKAEGPQAP 420

Query: 421 LLF 423
           LLF
Sbjct: 421 LLF 423


>gi|6912502 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase A isoform 1 [Homo
           sapiens]
          Length = 535

 Score =  797 bits (2059), Expect = 0.0
 Identities = 393/393 (100%), Positives = 393/393 (100%)

Query: 7   VSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEK 66
           VSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEK
Sbjct: 135 VSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEK 194

Query: 67  EFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGI 126
           EFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGI
Sbjct: 195 EFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGI 254

Query: 127 YYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIFM 186
           YYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIFM
Sbjct: 255 YYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIFM 314

Query: 187 FYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQK 246
           FYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQK
Sbjct: 315 FYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQK 374

Query: 247 LTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPIAGDYILFKFD 306
           LTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPIAGDYILFKFD
Sbjct: 375 LTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPIAGDYILFKFD 434

Query: 307 KPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKSEGLEISKETKDKRLEDGYFRIGKFEN 366
           KPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKSEGLEISKETKDKRLEDGYFRIGKFEN
Sbjct: 435 KPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKSEGLEISKETKDKRLEDGYFRIGKFEN 494

Query: 367 GVAEGMVDPSLNPISAFRLSVIQNSAVWAILNE 399
           GVAEGMVDPSLNPISAFRLSVIQNSAVWAILNE
Sbjct: 495 GVAEGMVDPSLNPISAFRLSVIQNSAVWAILNE 527


>gi|16915936 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase B isoform 2 [Homo
           sapiens]
          Length = 563

 Score =  540 bits (1392), Expect = e-154
 Identities = 268/400 (67%), Positives = 311/400 (77%), Gaps = 7/400 (1%)

Query: 7   VSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEK 66
           VS+VMGIP+V+REV SYL +TLHSLI  L P+EK D VIVV I ETD  Y   V  N++ 
Sbjct: 157 VSVVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSAVTENIKA 216

Query: 67  EFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGI 126
            F  EI SGL+EVISP   +YPD + L+E+FGD KERVRWRTKQNLDYCFLMMYAQ KGI
Sbjct: 217 LFPTEIHSGLLEVISPSPHFYPDFSRLRESFGDPKERVRWRTKQNLDYCFLMMYAQSKGI 276

Query: 127 YYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIFM 186
           YY+QLEDDI+ K NY +T+KNFALQ  SE+WMILEFSQLGFIGKMF++ DL+LIVEFI M
Sbjct: 277 YYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDLSLIVEFILM 336

Query: 187 FYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQK 246
           FY++KPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRF+PSLFQHVG HSSL+GKIQK
Sbjct: 337 FYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQK 396

Query: 247 LTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPIAGDYILFKFD 306
           L DKD+ K  L K HVNPPAEVSTSLK YQ  TLEK Y+ EDFFWA TP AGD+I F+F 
Sbjct: 397 LKDKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAYLREDFFWAFTPAAGDFIRFRFF 456

Query: 307 KPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKS-----EGLEISKET--KDKRLEDGYF 359
           +P+ +E + F SGN EHP D L NT+VEVLPF +     E L+  +    +  R  DGY 
Sbjct: 457 QPLRLERFFFRSGNIEHPEDKLFNTSVEVLPFDNPQSDKEALQEGRTATLRYPRSPDGYL 516

Query: 360 RIGKFENGVAEGMVDPSLNPISAFRLSVIQNSAVWAILNE 399
           +IG F  GVAEG VDP+  P+ A RLS+  +S VW IL+E
Sbjct: 517 QIGSFYKGVAEGEVDPAFGPLEALRLSIQTDSPVWVILSE 556


>gi|7710152 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase B isoform 1 [Homo
           sapiens]
          Length = 548

 Score =  540 bits (1392), Expect = e-154
 Identities = 268/400 (67%), Positives = 311/400 (77%), Gaps = 7/400 (1%)

Query: 7   VSIVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEK 66
           VS+VMGIP+V+REV SYL +TLHSLI  L P+EK D VIVV I ETD  Y   V  N++ 
Sbjct: 142 VSVVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSAVTENIKA 201

Query: 67  EFSKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGI 126
            F  EI SGL+EVISP   +YPD + L+E+FGD KERVRWRTKQNLDYCFLMMYAQ KGI
Sbjct: 202 LFPTEIHSGLLEVISPSPHFYPDFSRLRESFGDPKERVRWRTKQNLDYCFLMMYAQSKGI 261

Query: 127 YYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIFM 186
           YY+QLEDDI+ K NY +T+KNFALQ  SE+WMILEFSQLGFIGKMF++ DL+LIVEFI M
Sbjct: 262 YYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDLSLIVEFILM 321

Query: 187 FYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQK 246
           FY++KPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRF+PSLFQHVG HSSL+GKIQK
Sbjct: 322 FYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQK 381

Query: 247 LTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMGEDFFWAITPIAGDYILFKFD 306
           L DKD+ K  L K HVNPPAEVSTSLK YQ  TLEK Y+ EDFFWA TP AGD+I F+F 
Sbjct: 382 LKDKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAYLREDFFWAFTPAAGDFIRFRFF 441

Query: 307 KPVNVESYLFHSGNQEHPGDILLNTTVEVLPFKS-----EGLEISKET--KDKRLEDGYF 359
           +P+ +E + F SGN EHP D L NT+VEVLPF +     E L+  +    +  R  DGY 
Sbjct: 442 QPLRLERFFFRSGNIEHPEDKLFNTSVEVLPFDNPQSDKEALQEGRTATLRYPRSPDGYL 501

Query: 360 RIGKFENGVAEGMVDPSLNPISAFRLSVIQNSAVWAILNE 399
           +IG F  GVAEG VDP+  P+ A RLS+  +S VW IL+E
Sbjct: 502 QIGSFYKGVAEGEVDPAFGPLEALRLSIQTDSPVWVILSE 541


>gi|166197698 alpha-1,3-mannosyl-glycoprotein
           4-beta-N-acetylglucosaminyltransferase C [Homo sapiens]
          Length = 478

 Score =  226 bits (577), Expect = 2e-59
 Identities = 127/399 (31%), Positives = 215/399 (53%), Gaps = 25/399 (6%)

Query: 9   IVMGIPTVKREVKSYLIETLHSLIDNLYPEEKLDCVIVVFIGETDIDYVHGVVANLEKEF 68
           + +G+ +VKR+  +YL+ET+ S+ +    EE  +  +VV + + +  +   +V ++ ++F
Sbjct: 101 LTIGLSSVKRKKGNYLLETIKSIFEQSSYEELKEISVVVHLADFNSSWRDAMVQDITQKF 160

Query: 69  SKEISSGLVEVISPPESYYPDLTNLKETFGDSKERVRWRTKQNLDYCFLMMYAQEKGIYY 128
           +  I +G + VI  PE YYP L  LK  + D ++RV++R+KQN+DY FL+ +      YY
Sbjct: 161 AHHIIAGRLMVIHAPEEYYPILDGLKRNYNDPEDRVKFRSKQNVDYAFLLNFCANTSDYY 220

Query: 129 IQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIFMFY 188
           + LEDD+   +N+   IK     L    W+ LEFS+LG+IGK++ + DL  +  F+ MFY
Sbjct: 221 VMLEDDVRCSKNFLTAIKKVIASLEGTYWVTLEFSKLGYIGKLYHSHDLPRLAHFLLMFY 280

Query: 189 KEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLHSSLSGKIQKLT 248
           +E P DWLL H   +     +K+            IRF+PSLFQH+G +SS  G   KL 
Sbjct: 281 QEMPCDWLLTHFRGLLA---QKNV-----------IRFKPSLFQHMGYYSSYKGTENKLK 326

Query: 249 DKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTYMG-EDFFWAITPIAGDYILFKFDK 307
           D D+ +     I  NPPA + T++ V++ +   K Y   +++FW   P  GD  +  F+ 
Sbjct: 327 DDDFEEE-SFDIPDNPPASLYTNMNVFENYEASKAYSSVDEYFWGKPPSTGDVFVIVFEN 385

Query: 308 PVNVESYLFHSGNQEHPGDILLNTTVEVLPFKSEGLEISKETKDKRLEDGYFRIGKFENG 367
           P+ ++    ++G ++   DIL +  ++V     E +  SK+   +R    Y R+G+F+NG
Sbjct: 386 PIIIKKIKVNTGTEDRQNDILHHGALDV----GENVMPSKQ---RRQCSTYLRLGEFKNG 438

Query: 368 VAE--GMVDPSLNPISAFRLSVIQNSAVWAILNEQRVFS 404
             E  G+       I   R+ V +    W I+    +++
Sbjct: 439 NFEMSGVNQKIPFDIHCMRIYVTKTQKEWLIIRSISIWT 477


>gi|239752981 PREDICTED: similar to hCG1811644 [Homo sapiens]
          Length = 245

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 32/217 (14%)

Query: 118 MMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDL 177
           M +A     Y++ LED I     +   I +         W+ILEFS L   GK+F   D 
Sbjct: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60

Query: 178 TLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLH 237
           + +  F  +F+K+ P   LL     +                 N+ I F PS+F H G +
Sbjct: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLA--------------QNIPIHFSPSVFHHTGNY 106

Query: 238 S---SLSGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTY-MGEDFFWAI 293
           S    +   ++K  D+ + +P       NP A V T +       L+ TY + ++ +  +
Sbjct: 107 SVFDDMCFSVEK--DRVFGEP------DNPVATVLTDMVSMLAVILQYTYTLNKEGYSTL 158

Query: 294 TPIAGDYILFKFDKP-----VNVESYLFHSGNQEHPG 325
            P+ G+Y+    D+P     + V  Y    G Q  PG
Sbjct: 159 NPLKGNYLTVILDRPQKNTQIAVGRYRLQQG-QVEPG 194


>gi|239747558 PREDICTED: similar to hCG1811644 [Homo sapiens]
          Length = 245

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 32/217 (14%)

Query: 118 MMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDL 177
           M +A     Y++ LED I     +   I +         W+ILEFS L   GK+F   D 
Sbjct: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60

Query: 178 TLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLH 237
           + +  F  +F+K+ P   LL     +                 N+ I F PS+F H G +
Sbjct: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLA--------------QNIPIHFSPSVFHHTGNY 106

Query: 238 S---SLSGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTY-MGEDFFWAI 293
           S    +   ++K  D+ + +P       NP A V T +       L+ TY + ++ +  +
Sbjct: 107 SVFDDMCFSVEK--DRVFGEP------DNPVATVLTDMVSMLAVILQYTYTLNKEGYSTL 158

Query: 294 TPIAGDYILFKFDKP-----VNVESYLFHSGNQEHPG 325
            P+ G+Y+    D+P     + V  Y    G Q  PG
Sbjct: 159 NPLKGNYLTVILDRPQKNTQIAVGRYRLQQG-QVEPG 194


>gi|239741432 PREDICTED: similar to hCG1811644 [Homo sapiens]
          Length = 245

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 32/217 (14%)

Query: 118 MMYAQEKGIYYIQLEDDIIVKQNYFNTIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDL 177
           M +A     Y++ LED I     +   I +         W+ILEFS L   GK+F   D 
Sbjct: 1   MNFASNLSDYFLLLEDHIHCTPKFAAAISSALSAWKELPWVILEFSHLSISGKVFCTSDF 60

Query: 178 TLIVEFIFMFYKEKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFRPSLFQHVGLH 237
           + +  F  +F+K+ P   LL     +                 N+ I F PS+F H G +
Sbjct: 61  SRLNTFFLLFHKDTPTHLLLSEFRLLLA--------------QNIPIHFSPSVFHHTGNY 106

Query: 238 S---SLSGKIQKLTDKDYMKPLLLKIHVNPPAEVSTSLKVYQGHTLEKTY-MGEDFFWAI 293
           S    +   ++K  D+ + +P       NP A V T +       L+ TY + ++ +  +
Sbjct: 107 SVFDDMCFSVEK--DRVFGEP------DNPVATVLTDMVSMLAVILQYTYTLNKEGYSTL 158

Query: 294 TPIAGDYILFKFDKP-----VNVESYLFHSGNQEHPG 325
            P+ G+Y+    D+P     + V  Y    G Q  PG
Sbjct: 159 NPLKGNYLTVILDRPQKNTQIAVGRYRLQQG-QVEPG 194


>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
            sapiens]
          Length = 1972

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 89   DLTNLKETFGDSKERVRWRTKQNLDYCF-LMMYAQEKGIYYIQLEDDIIVKQNYFNTIKN 147
            D+ +L     D++E ++  T+Q L+    L    +E+     QL++++  KQN    I  
Sbjct: 1309 DVASLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHIST 1368

Query: 148  FALQLSSEEWMILEFS 163
              +QLS  +  + +F+
Sbjct: 1369 LNIQLSDSKKKLQDFA 1384


>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
            sapiens]
          Length = 1979

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 89   DLTNLKETFGDSKERVRWRTKQNLDYCF-LMMYAQEKGIYYIQLEDDIIVKQNYFNTIKN 147
            D+ +L     D++E ++  T+Q L+    L    +E+     QL++++  KQN    I  
Sbjct: 1316 DVASLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHIST 1375

Query: 148  FALQLSSEEWMILEFS 163
              +QLS  +  + +F+
Sbjct: 1376 LNIQLSDSKKKLQDFA 1391


>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
            sapiens]
          Length = 1945

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 89   DLTNLKETFGDSKERVRWRTKQNLDYCF-LMMYAQEKGIYYIQLEDDIIVKQNYFNTIKN 147
            D+ +L     D++E ++  T+Q L+    L    +E+     QL++++  KQN    I  
Sbjct: 1316 DVASLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHIST 1375

Query: 148  FALQLSSEEWMILEFS 163
              +QLS  +  + +F+
Sbjct: 1376 LNIQLSDSKKKLQDFA 1391


>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
            sapiens]
          Length = 1938

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 89   DLTNLKETFGDSKERVRWRTKQNLDYCF-LMMYAQEKGIYYIQLEDDIIVKQNYFNTIKN 147
            D+ +L     D++E ++  T+Q L+    L    +E+     QL++++  KQN    I  
Sbjct: 1309 DVASLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHIST 1368

Query: 148  FALQLSSEEWMILEFS 163
              +QLS  +  + +F+
Sbjct: 1369 LNIQLSDSKKKLQDFA 1384


>gi|94721321 coiled-coil domain containing 11 [Homo sapiens]
          Length = 514

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 7/70 (10%)

Query: 42  DCVIVVFIGETDI-DYVHGVVANLEKEFSKEISSGLVEVISPPES-YYPDLTNLKETFGD 99
           DC I+  +    I D V G + N+E+  +K     L E+++  E+ Y+ ++   KET  +
Sbjct: 71  DCKILDSLVRARIKDAVQGFIINIEERRNK-----LRELLALEENEYFTEMQLKKETIEE 125

Query: 100 SKERVRWRTK 109
            K+R+R +TK
Sbjct: 126 KKDRMREKTK 135


>gi|22748701 zinc finger protein 641 [Homo sapiens]
          Length = 438

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 144 TIKNFALQLSSEEWMILEFSQLGFIGKMFQAPDLTLIVEFIF 185
           TIK+ +L  S EEW  L+ SQ  F G+     +  ++V   F
Sbjct: 110 TIKDVSLCFSQEEWRSLDPSQTDFYGEYVMQENCGIVVSLRF 151


>gi|170763519 transforming, acidic coiled-coil containing protein 1
           isoform 2 [Homo sapiens]
          Length = 395

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 7/83 (8%)

Query: 338 FKSEGLEISKETKDKRLEDGYFRIGKFENGVAEGMVDPSL---NPISAFRLSVIQNSAVW 394
           F S    I KET  K  EDG   +G  E+   +  V  S    +P+    LS    +AV 
Sbjct: 138 FSSSEAGIEKETCQKMEEDGSTVLGLLESSAEKAPVSVSCGGESPLDGICLSESDKTAVL 197

Query: 395 AILNEQ----RVFSGWWQKSRDK 413
            ++ E+     + +  W+K  ++
Sbjct: 198 TLIREEIITKEIEANEWKKKYEE 220


>gi|170763517 transforming, acidic coiled-coil containing protein 1
           isoform 1 [Homo sapiens]
          Length = 805

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 7/83 (8%)

Query: 338 FKSEGLEISKETKDKRLEDGYFRIGKFENGVAEGMVDPSL---NPISAFRLSVIQNSAVW 394
           F S    I KET  K  EDG   +G  E+   +  V  S    +P+    LS    +AV 
Sbjct: 548 FSSSEAGIEKETCQKMEEDGSTVLGLLESSAEKAPVSVSCGGESPLDGICLSESDKTAVL 607

Query: 395 AILNEQ----RVFSGWWQKSRDK 413
            ++ E+     + +  W+K  ++
Sbjct: 608 TLIREEIITKEIEANEWKKKYEE 630


>gi|226246618 transforming, acidic coiled-coil containing protein 1
           isoform 3 [Homo sapiens]
          Length = 610

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 7/83 (8%)

Query: 338 FKSEGLEISKETKDKRLEDGYFRIGKFENGVAEGMVDPSL---NPISAFRLSVIQNSAVW 394
           F S    I KET  K  EDG   +G  E+   +  V  S    +P+    LS    +AV 
Sbjct: 353 FSSSEAGIEKETCQKMEEDGSTVLGLLESSAEKAPVSVSCGGESPLDGICLSESDKTAVL 412

Query: 395 AILNEQ----RVFSGWWQKSRDK 413
            ++ E+     + +  W+K  ++
Sbjct: 413 TLIREEIITKEIEANEWKKKYEE 435


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,912,987
Number of Sequences: 37866
Number of extensions: 704552
Number of successful extensions: 1514
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1492
Number of HSP's gapped (non-prelim): 21
length of query: 423
length of database: 18,247,518
effective HSP length: 105
effective length of query: 318
effective length of database: 14,271,588
effective search space: 4538364984
effective search space used: 4538364984
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.