Search of human proteins with 23503273

Search of human proteins with 23503273

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|23503273 transmembrane protein 150A isoform 2 [Homo sapiens]
         (218 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|23503273 transmembrane protein 150A isoform 2 [Homo sapiens]       440   e-124
gi|72534762 transmembrane protein 150A isoform 1 [Homo sapiens]       362   e-100
gi|148232433 transmembrane protein 150B [Homo sapiens]                 70   2e-12
gi|122937458 hypothetical protein LOC441027 [Homo sapiens]             60   1e-09
gi|110825978 DNA-damage regulated autophagy modulator 1 [Homo sa...    47   2e-05
gi|166235182 transmembrane protein 77 [Homo sapiens]                   37   0.010
gi|13236579 solute carrier family 27 member 3 [Homo sapiens]           29   3.5  
gi|114520607 neural precursor cell expressed, developmentally do...    28   4.6  
gi|148228829 G protein-coupled receptor 1 [Homo sapiens]               28   6.0  
gi|36951012 G protein-coupled receptor 1 [Homo sapiens]                28   6.0  
gi|83367077 mucin 16 [Homo sapiens]                                    28   7.9  
gi|198041662 pyrroline-5-carboxylate reductase-like [Homo sapiens]     28   7.9  
gi|38524591 intramembrane protease 5 [Homo sapiens]                    28   7.9  

>gi|23503273 transmembrane protein 150A isoform 2 [Homo sapiens]
          Length = 218

 Score =  440 bits (1131), Expect = e-124
 Identities = 218/218 (100%), Positives = 218/218 (100%)

Query: 1   MYALWRTGPTTSPALLTLLSKGVPRPAAPWTMSPSSVALICLLRYGQLLEQSRHSWVNTT 60
           MYALWRTGPTTSPALLTLLSKGVPRPAAPWTMSPSSVALICLLRYGQLLEQSRHSWVNTT
Sbjct: 1   MYALWRTGPTTSPALLTLLSKGVPRPAAPWTMSPSSVALICLLRYGQLLEQSRHSWVNTT 60

Query: 61  ALITGCTNAAGLLVVGNFQVDHARSLHYVGAGVAFPAGLLFVCLHCALSYQGATAPLDLA 120
           ALITGCTNAAGLLVVGNFQVDHARSLHYVGAGVAFPAGLLFVCLHCALSYQGATAPLDLA
Sbjct: 61  ALITGCTNAAGLLVVGNFQVDHARSLHYVGAGVAFPAGLLFVCLHCALSYQGATAPLDLA 120

Query: 121 VAYLRSVLAVIAFITLVLSGVFFVHESSQLQHGAALCEWVCVIDIPIFYGTFSYEFGAVS 180
           VAYLRSVLAVIAFITLVLSGVFFVHESSQLQHGAALCEWVCVIDIPIFYGTFSYEFGAVS
Sbjct: 121 VAYLRSVLAVIAFITLVLSGVFFVHESSQLQHGAALCEWVCVIDIPIFYGTFSYEFGAVS 180

Query: 181 SDTLVAALQPTPGRACKSSGSSSTSTHLNCAPESIAMI 218
           SDTLVAALQPTPGRACKSSGSSSTSTHLNCAPESIAMI
Sbjct: 181 SDTLVAALQPTPGRACKSSGSSSTSTHLNCAPESIAMI 218


>gi|72534762 transmembrane protein 150A isoform 1 [Homo sapiens]
          Length = 271

 Score =  362 bits (929), Expect = e-100
 Identities = 182/187 (97%), Positives = 182/187 (97%)

Query: 32  MSPSSVALICLLRYGQLLEQSRHSWVNTTALITGCTNAAGLLVVGNFQVDHARSLHYVGA 91
           M    VALICLLRYGQLLEQSRHSWVNTTALITGCTNAAGLLVVGNFQVDHARSLHYVGA
Sbjct: 85  MGAFMVALICLLRYGQLLEQSRHSWVNTTALITGCTNAAGLLVVGNFQVDHARSLHYVGA 144

Query: 92  GVAFPAGLLFVCLHCALSYQGATAPLDLAVAYLRSVLAVIAFITLVLSGVFFVHESSQLQ 151
           GVAFPAGLLFVCLHCALSYQGATAPLDLAVAYLRSVLAVIAFITLVLSGVFFVHESSQLQ
Sbjct: 145 GVAFPAGLLFVCLHCALSYQGATAPLDLAVAYLRSVLAVIAFITLVLSGVFFVHESSQLQ 204

Query: 152 HGAALCEWVCVIDIPIFYGTFSYEFGAVSSDTLVAALQPTPGRACKSSGSSSTSTHLNCA 211
           HGAALCEWVCVIDI IFYGTFSYEFGAVSSDTLVAALQPTPGRACKSSGSSSTSTHLNCA
Sbjct: 205 HGAALCEWVCVIDILIFYGTFSYEFGAVSSDTLVAALQPTPGRACKSSGSSSTSTHLNCA 264

Query: 212 PESIAMI 218
           PESIAMI
Sbjct: 265 PESIAMI 271


>gi|148232433 transmembrane protein 150B [Homo sapiens]
          Length = 233

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 6/162 (3%)

Query: 32  MSPSSVALICLLRYGQLLEQSRHSWVNTTALITGCTNAAGLLVVGNFQVDHARSLHYVGA 91
           M  +  A IC++RY QL +     W N   L TG   A G  VVGNFQ  + R  H  GA
Sbjct: 61  MGAALAAWICIVRYHQLRDWGVRRWPNQLILWTGLLCALGTSVVGNFQEKNQRPTHLAGA 120

Query: 92  GVAFPAGLLFVCLHCAL-SYQGATAPLDLAVAYLRSVLAVIAFITLVLSGVFFVHESSQL 150
            +AF  G ++  L   L   +    P    +  LR  L + +  T+++  +  +H  S L
Sbjct: 121 FLAFILGNVYFWLQLLLWRLKRLPQPGAAWIGPLR--LGLCSVCTILIVAMIVLHACS-L 177

Query: 151 QHGAALCEWVCVIDIPIFYGTFSYEFGAVSSDTLVAALQPTP 192
           +  +A CEWV  + +   +G  + +F A+ S TL   +QP P
Sbjct: 178 RSVSAACEWVVAMLLFALFGLLAVDFSALESCTL--CVQPWP 217


>gi|122937458 hypothetical protein LOC441027 [Homo sapiens]
          Length = 249

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 3/138 (2%)

Query: 39  LICLLRYGQLLEQSRHSWVNTTALITGCTNAAGLLVVGNFQVDHARSLHYVGAGVAFPAG 98
           ++ +LR+ QL  +  + W+N + L+  C  + G+ ++GNFQ+ +   +H VG  + F  G
Sbjct: 81  VVAVLRFIQLKPKVLNPWLNISGLVALCLASFGMTLLGNFQLTNDEEIHNVGTSLTFGFG 140

Query: 99  LLFVCLHCALSYQGATAPLDLAVAYLRSVLAVIAFITLVLSGVFFVHESSQLQHGAALCE 158
            L   +  AL+ +         V   R +L+    + +VL   +F+  +  +   AA  +
Sbjct: 141 TLTCWIQAALTLKVNIKNEGRRVGIPRVILSASITLCVVL---YFILMAQSIHMYAARVQ 197

Query: 159 WVCVIDIPIFYGTFSYEF 176
           W  V+    ++GTF+ EF
Sbjct: 198 WGLVMCFLSYFGTFAVEF 215


>gi|110825978 DNA-damage regulated autophagy modulator 1 [Homo
           sapiens]
          Length = 238

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 12/135 (8%)

Query: 58  NTTALITGCTNAAGLLVVGNFQVDHARSLHYVGAGVAFPAGLLFVCLHCALSYQGATAPL 117
           N  +L+ G     G+ +V NFQ      +H  GA +AF  G+++  L   +SY+      
Sbjct: 93  NLVSLVLGLVGCFGMGIVANFQELAVPVVHDGGALLAFVCGVVYTLLQSIISYKSCPQWN 152

Query: 118 DLAVAYLRSVLAVI---AFITLVLSGVFF--------VHESSQLQH-GAALCEWVCVIDI 165
            L+  ++R V++ +   A I +++               E   + H  +A+CEW      
Sbjct: 153 SLSTCHIRMVISAVSCAAVIPMIVCASLISITKLEWNPREKDYVYHVVSAICEWTVAFGF 212

Query: 166 PIFYGTFSYEFGAVS 180
             ++ TF  +F +V+
Sbjct: 213 IFYFLTFIQDFQSVT 227


>gi|166235182 transmembrane protein 77 [Homo sapiens]
          Length = 266

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 22/74 (29%), Positives = 35/74 (47%)

Query: 57  VNTTALITGCTNAAGLLVVGNFQVDHARSLHYVGAGVAFPAGLLFVCLHCALSYQGATAP 116
           +N   L+ G  +  GL +V NFQ     + H  GA + F  G L++ +   LSYQ     
Sbjct: 91  LNKAGLVLGILSCLGLSIVANFQKTTLFAAHVSGAVLTFGMGSLYMFVQTILSYQMQPKI 150

Query: 117 LDLAVAYLRSVLAV 130
               V ++R +L +
Sbjct: 151 HGKQVFWIRLLLVI 164


>gi|13236579 solute carrier family 27 member 3 [Homo sapiens]
          Length = 730

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 4/43 (9%)

Query: 4   LWRTGPTTSPA----LLTLLSKGVPRPAAPWTMSPSSVALICL 42
           LW  GP T PA    LL  +S  V  P   +  SP S+   CL
Sbjct: 289 LWAAGPGTHPAGISDLLAEVSAEVDGPVPGYLSSPQSITDTCL 331


>gi|114520607 neural precursor cell expressed, developmentally
           down-regulated 4 isoform 2 [Homo sapiens]
          Length = 1247

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query: 7   TGPTTSPALLTLLSKGVPRPAAPWTMSPSSVA 38
           T PT+  +L TLLSKG  + +  + +SPS +A
Sbjct: 276 TRPTSPTSLCTLLSKGSYQTSHQFIISPSEIA 307


>gi|148228829 G protein-coupled receptor 1 [Homo sapiens]
          Length = 355

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 31  TMSPSSVALICLLRYGQLLEQSRHSWVNTTALI--TGCTNAAGLLVVGNFQVDH-ARSLH 87
           TMS   + LI  ++   +L  SRH W     ++    C     L  +    + H + S H
Sbjct: 221 TMSICYLCLIFKVKKRSILISSRHFWTILVVVVAFVVCWTPYHLFSIWELTIHHNSYSHH 280

Query: 88  YVGAGVAFPAGLLFV--CLH 105
            + AG+    GL F+  CL+
Sbjct: 281 VMQAGIPLSTGLAFLNSCLN 300


>gi|36951012 G protein-coupled receptor 1 [Homo sapiens]
          Length = 355

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 31  TMSPSSVALICLLRYGQLLEQSRHSWVNTTALI--TGCTNAAGLLVVGNFQVDH-ARSLH 87
           TMS   + LI  ++   +L  SRH W     ++    C     L  +    + H + S H
Sbjct: 221 TMSICYLCLIFKVKKRSILISSRHFWTILVVVVAFVVCWTPYHLFSIWELTIHHNSYSHH 280

Query: 88  YVGAGVAFPAGLLFV--CLH 105
            + AG+    GL F+  CL+
Sbjct: 281 VMQAGIPLSTGLAFLNSCLN 300


>gi|83367077 mucin 16 [Homo sapiens]
          Length = 14507

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%)

Query: 171  TFSYEFGAVSSDTLVAALQPTPGRACKS---SGSSSTSTHLNCAPE 213
            T ++EF  V S    +A  PTPG++  +   S +S+ S+ L+ +PE
Sbjct: 2889 TLTFEFSEVPSLDTKSASLPTPGQSLNTIPDSDASTASSSLSKSPE 2934


>gi|198041662 pyrroline-5-carboxylate reductase-like [Homo sapiens]
          Length = 286

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 41/150 (27%), Positives = 61/150 (40%), Gaps = 18/150 (12%)

Query: 39  LICLLRYGQL-LEQSRHSWVNTTALITGCTNAAGLLV-VGNFQVDHARSLHYVGAGVAFP 96
           L C+++ G + + + RH   + T L+     A G    V    VD    L   G+GVAF 
Sbjct: 139 LPCVVQEGAIVMARGRHVGSSETKLLQHLLEACGRCEEVPEAYVDIHTGLS--GSGVAF- 195

Query: 97  AGLLFVCLHCALSYQGATAPLDLAVAYLRSVLAVIAFITLVLSGVFFVHESSQLQHGAAL 156
                VC       +GA     + +    S+   IA  TL+ +    +HE    QH A L
Sbjct: 196 -----VCAFSEALAEGA-----VKMGMPSSLAHRIAAQTLLGTAKMLLHEG---QHPAQL 242

Query: 157 CEWVCVIDIPIFYGTFSYEFGAVSSDTLVA 186
              VC       YG  + E G + + T+ A
Sbjct: 243 RSDVCTPGGTTIYGLHALEQGGLRAATMSA 272


>gi|38524591 intramembrane protease 5 [Homo sapiens]
          Length = 684

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 17/50 (34%), Positives = 25/50 (50%)

Query: 83  ARSLHYVGAGVAFPAGLLFVCLHCALSYQGATAPLDLAVAYLRSVLAVIA 132
           +R +++V   VA+  GLL   +   L   G  A L L  + L + LAV A
Sbjct: 468 SRQIYFVACTVAYAVGLLVTFMAMVLMQMGQPALLYLVSSTLLTSLAVAA 517


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.134    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,550,288
Number of Sequences: 37866
Number of extensions: 358389
Number of successful extensions: 1406
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1393
Number of HSP's gapped (non-prelim): 15
length of query: 218
length of database: 18,247,518
effective HSP length: 98
effective length of query: 120
effective length of database: 14,536,650
effective search space: 1744398000
effective search space used: 1744398000
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.