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Search of human proteins with 23308577
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23308577 phosphoglycerate dehydrogenase [Homo sapiens]
(533 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23308577 phosphoglycerate dehydrogenase [Homo sapiens] 1052 0.0
gi|61743967 C-terminal binding protein 1 isoform 2 [Homo sapiens] 143 3e-34
gi|4557497 C-terminal binding protein 1 isoform 1 [Homo sapiens] 143 3e-34
gi|145580578 C-terminal binding protein 2 isoform 1 [Homo sapiens] 138 1e-32
gi|4557499 C-terminal binding protein 2 isoform 1 [Homo sapiens] 138 1e-32
gi|145580575 C-terminal binding protein 2 isoform 2 [Homo sapiens] 138 1e-32
gi|6912396 glyoxylate reductase/hydroxypyruvate reductase [Homo ... 133 5e-31
gi|7657116 glyceraldehyde-3-phosphate dehydrogenase, spermatogen... 32 1.9
gi|21264602 laminin alpha 5 [Homo sapiens] 30 4.2
gi|8923946 neutral sphingomyelin phosphodiesterase 3 [Homo sapiens] 30 5.5
gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform... 30 7.2
gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo ... 30 7.2
gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo ... 30 7.2
gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo ... 30 7.2
gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1... 30 7.2
gi|206597468 neural precursor cell expressed, developmentally do... 30 7.2
gi|23097254 neural precursor cell expressed, developmentally dow... 30 7.2
gi|206597465 neural precursor cell expressed, developmentally do... 30 7.2
gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens] 30 7.2
gi|46909600 a disintegrin and metalloproteinase domain 15 isofor... 29 9.4
gi|46909598 a disintegrin and metalloproteinase domain 15 isofor... 29 9.4
gi|46909596 a disintegrin and metalloproteinase domain 15 isofor... 29 9.4
gi|46909594 a disintegrin and metalloproteinase domain 15 isofor... 29 9.4
gi|46909592 a disintegrin and metalloproteinase domain 15 isofor... 29 9.4
gi|46909590 a disintegrin and metalloproteinase domain 15 isofor... 29 9.4
gi|16751921 dermcidin preproprotein [Homo sapiens] 29 9.4
gi|116006953 polycystin 1-like 2 isoform c [Homo sapiens] 29 9.4
gi|116006951 polycystin 1-like 2 isoform a [Homo sapiens] 29 9.4
>gi|23308577 phosphoglycerate dehydrogenase [Homo sapiens]
Length = 533
Score = 1052 bits (2720), Expect = 0.0
Identities = 533/533 (100%), Positives = 533/533 (100%)
Query: 1 MAFANLRKVLISDSLDPCCRKILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVT 60
MAFANLRKVLISDSLDPCCRKILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVT
Sbjct: 1 MAFANLRKVLISDSLDPCCRKILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVT 60
Query: 61 ADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQ 120
ADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQ
Sbjct: 61 ADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQ 120
Query: 121 IPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP 180
IPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP
Sbjct: 121 IPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP 180
Query: 181 EVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIV 240
EVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIV
Sbjct: 181 EVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIV 240
Query: 241 DEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRCGEEIA 300
DEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRCGEEIA
Sbjct: 241 DEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRCGEEIA 300
Query: 301 VQFVDMVKGKSLTGVVNAQALTSAFSPHTKPWIGLAEALGTLMRAWAGSPKGTIQVITQG 360
VQFVDMVKGKSLTGVVNAQALTSAFSPHTKPWIGLAEALGTLMRAWAGSPKGTIQVITQG
Sbjct: 301 VQFVDMVKGKSLTGVVNAQALTSAFSPHTKPWIGLAEALGTLMRAWAGSPKGTIQVITQG 360
Query: 361 TSLKNAGNCLSPAVIVGLLKEASKQADVNLVNAKLLVKEAGLNVTTSHSPAAPGEQGFGE 420
TSLKNAGNCLSPAVIVGLLKEASKQADVNLVNAKLLVKEAGLNVTTSHSPAAPGEQGFGE
Sbjct: 361 TSLKNAGNCLSPAVIVGLLKEASKQADVNLVNAKLLVKEAGLNVTTSHSPAAPGEQGFGE 420
Query: 421 CLLAVALAGAPYQAVGLVQGTTPVLQGLNGAVFRPEVPLRRDLPLLLFRTQTSDPAMLPT 480
CLLAVALAGAPYQAVGLVQGTTPVLQGLNGAVFRPEVPLRRDLPLLLFRTQTSDPAMLPT
Sbjct: 421 CLLAVALAGAPYQAVGLVQGTTPVLQGLNGAVFRPEVPLRRDLPLLLFRTQTSDPAMLPT 480
Query: 481 MIGLLAEAGVRLLSYQTSLVSDGETWHVMGISSLLPSLEAWKQHVTEAFQFHF 533
MIGLLAEAGVRLLSYQTSLVSDGETWHVMGISSLLPSLEAWKQHVTEAFQFHF
Sbjct: 481 MIGLLAEAGVRLLSYQTSLVSDGETWHVMGISSLLPSLEAWKQHVTEAFQFHF 533
>gi|61743967 C-terminal binding protein 1 isoform 2 [Homo sapiens]
Length = 429
Score = 143 bits (361), Expect = 3e-34
Identities = 97/293 (33%), Positives = 156/293 (53%), Gaps = 13/293 (4%)
Query: 45 LQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSL 104
L + G ++ +T + + + L+++ R G+G DN+D+++A GI V N P +
Sbjct: 56 LNEAVGALMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVE 115
Query: 105 SAAELTCGMIMCLARQIPQATASMKDG------KWERKKFMGT-ELNGKTLGILGLGRIG 157
A+ T I+ L R+ ++++G + R+ G + G+TLGI+GLGR+G
Sbjct: 116 ETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVG 175
Query: 158 REVATRMQSFGMKTIGYDPIISPEVSASFGVQQLP-LEEIWPLCDFITVHTPLLPSTTGL 216
+ VA R ++FG + YDP +S V + G+Q++ L+++ D +T+H L L
Sbjct: 176 QAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHL 235
Query: 217 LNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP--PRDRALVD 274
+ND T Q ++G +VN ARGG+VDE AL +AL+ G+ GAALDV EP L D
Sbjct: 236 INDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKD 295
Query: 275 HENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGK---SLTGVVNAQALTSA 324
N+I PH +++A EE A + + G+ SL VN LT+A
Sbjct: 296 APNLICTPHAAWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVNKDHLTAA 348
>gi|4557497 C-terminal binding protein 1 isoform 1 [Homo sapiens]
Length = 440
Score = 143 bits (361), Expect = 3e-34
Identities = 97/293 (33%), Positives = 156/293 (53%), Gaps = 13/293 (4%)
Query: 45 LQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSL 104
L + G ++ +T + + + L+++ R G+G DN+D+++A GI V N P +
Sbjct: 67 LNEAVGALMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVE 126
Query: 105 SAAELTCGMIMCLARQIPQATASMKDG------KWERKKFMGT-ELNGKTLGILGLGRIG 157
A+ T I+ L R+ ++++G + R+ G + G+TLGI+GLGR+G
Sbjct: 127 ETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVG 186
Query: 158 REVATRMQSFGMKTIGYDPIISPEVSASFGVQQLP-LEEIWPLCDFITVHTPLLPSTTGL 216
+ VA R ++FG + YDP +S V + G+Q++ L+++ D +T+H L L
Sbjct: 187 QAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHL 246
Query: 217 LNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP--PRDRALVD 274
+ND T Q ++G +VN ARGG+VDE AL +AL+ G+ GAALDV EP L D
Sbjct: 247 INDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKD 306
Query: 275 HENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGK---SLTGVVNAQALTSA 324
N+I PH +++A EE A + + G+ SL VN LT+A
Sbjct: 307 APNLICTPHAAWYSEQASIEMREEAAREIRRAITGRIPDSLKNCVNKDHLTAA 359
>gi|145580578 C-terminal binding protein 2 isoform 1 [Homo sapiens]
Length = 445
Score = 138 bits (347), Expect = 1e-32
Identities = 97/301 (32%), Positives = 153/301 (50%), Gaps = 18/301 (5%)
Query: 45 LQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSL 104
L + G ++ +T + + + L+V+ R G+G DNVD++AA GI V N P+
Sbjct: 73 LNEAVGAMMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVE 132
Query: 105 SAAELTCGMIMCLARQIPQATASMKDG------KWERKKFMGT-ELNGKTLGILGLGRIG 157
A+ T I+ L R+ ++++G + R+ G + G+TLG++G GR G
Sbjct: 133 ETADSTICHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTG 192
Query: 158 REVATRMQSFGMKTIGYDPIISPEVSASFGVQQL-PLEEIWPLCDFITVHTPLLPSTTGL 216
+ VA R ++FG I YDP + + S GVQ++ L+++ D +++H L L
Sbjct: 193 QAVAVRAKAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHL 252
Query: 217 LNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP--PRDRALVD 274
+ND T Q ++G +VN ARGG+VDE AL +AL+ G+ GAALDV EP L D
Sbjct: 253 INDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKD 312
Query: 275 HENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGK---SLTGVVNAQALTSAFSPHTKP 331
N+I PH +++A E A + + G+ SL VN + F + P
Sbjct: 313 APNLICTPHTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKE-----FFVTSAP 367
Query: 332 W 332
W
Sbjct: 368 W 368
>gi|4557499 C-terminal binding protein 2 isoform 1 [Homo sapiens]
Length = 445
Score = 138 bits (347), Expect = 1e-32
Identities = 97/301 (32%), Positives = 153/301 (50%), Gaps = 18/301 (5%)
Query: 45 LQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSL 104
L + G ++ +T + + + L+V+ R G+G DNVD++AA GI V N P+
Sbjct: 73 LNEAVGAMMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVE 132
Query: 105 SAAELTCGMIMCLARQIPQATASMKDG------KWERKKFMGT-ELNGKTLGILGLGRIG 157
A+ T I+ L R+ ++++G + R+ G + G+TLG++G GR G
Sbjct: 133 ETADSTICHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTG 192
Query: 158 REVATRMQSFGMKTIGYDPIISPEVSASFGVQQL-PLEEIWPLCDFITVHTPLLPSTTGL 216
+ VA R ++FG I YDP + + S GVQ++ L+++ D +++H L L
Sbjct: 193 QAVAVRAKAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHL 252
Query: 217 LNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP--PRDRALVD 274
+ND T Q ++G +VN ARGG+VDE AL +AL+ G+ GAALDV EP L D
Sbjct: 253 INDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKD 312
Query: 275 HENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGK---SLTGVVNAQALTSAFSPHTKP 331
N+I PH +++A E A + + G+ SL VN + F + P
Sbjct: 313 APNLICTPHTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKE-----FFVTSAP 367
Query: 332 W 332
W
Sbjct: 368 W 368
>gi|145580575 C-terminal binding protein 2 isoform 2 [Homo sapiens]
Length = 985
Score = 138 bits (347), Expect = 1e-32
Identities = 97/301 (32%), Positives = 153/301 (50%), Gaps = 18/301 (5%)
Query: 45 LQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSL 104
L + G ++ +T + + + L+V+ R G+G DNVD++AA GI V N P+
Sbjct: 613 LNEAVGAMMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVE 672
Query: 105 SAAELTCGMIMCLARQIPQATASMKDG------KWERKKFMGT-ELNGKTLGILGLGRIG 157
A+ T I+ L R+ ++++G + R+ G + G+TLG++G GR G
Sbjct: 673 ETADSTICHILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTG 732
Query: 158 REVATRMQSFGMKTIGYDPIISPEVSASFGVQQL-PLEEIWPLCDFITVHTPLLPSTTGL 216
+ VA R ++FG I YDP + + S GVQ++ L+++ D +++H L L
Sbjct: 733 QAVAVRAKAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHL 792
Query: 217 LNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP--PRDRALVD 274
+ND T Q ++G +VN ARGG+VDE AL +AL+ G+ GAALDV EP L D
Sbjct: 793 INDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPLKD 852
Query: 275 HENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGK---SLTGVVNAQALTSAFSPHTKP 331
N+I PH +++A E A + + G+ SL VN + F + P
Sbjct: 853 APNLICTPHTAWYSEQASLEMREAAATEIRRAITGRIPESLRNCVNKE-----FFVTSAP 907
Query: 332 W 332
W
Sbjct: 908 W 908
>gi|6912396 glyoxylate reductase/hydroxypyruvate reductase [Homo
sapiens]
Length = 328
Score = 133 bits (334), Expect = 5e-31
Identities = 84/263 (31%), Positives = 143/263 (54%), Gaps = 10/263 (3%)
Query: 39 EELIAELQDCEGLIVRSATKVTADVINAA-EKLQVVGRAGTGVDNVDLEAATRKGILVMN 97
+EL + GL+ + V +++AA L+V+ G+D++ L+ ++GI V
Sbjct: 43 KELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGY 102
Query: 98 TPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKK---FMGTELNGKTLGILGLG 154
TP+ + + AEL +++ R++P+A +K+G W K G L T+GI+GLG
Sbjct: 103 TPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLG 162
Query: 155 RIGREVATRMQSFGMKTI---GYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLP 211
RIG+ +A R++ FG++ G P PE +A F + + E+ DFI V L P
Sbjct: 163 RIGQAIARRLKPFGVQRFLYTGRQP--RPEEAAEFQAEFVSTPELAAQSDFIVVACSLTP 220
Query: 212 STTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP-PRDR 270
+T GL N + F + K+ +N +RG +V++ L +AL SG+ A A LDV + EP P +
Sbjct: 221 ATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNH 280
Query: 271 ALVDHENVISCPHLGASTKEAQS 293
L+ +N + PH+G++T ++
Sbjct: 281 PLLTLKNCVILPHIGSATHRTRN 303
>gi|7657116 glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
[Homo sapiens]
Length = 408
Score = 31.6 bits (70), Expect = 1.9
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 147 TLGILGLGRIGREVATRMQSFGMKTIGY-DPIISPE 181
T+GI G GRIGR V G+K + DP I PE
Sbjct: 77 TVGINGFGRIGRLVLRACMEKGVKVVAVNDPFIDPE 112
>gi|21264602 laminin alpha 5 [Homo sapiens]
Length = 3695
Score = 30.4 bits (67), Expect = 4.2
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 406 TSHSPAAPGEQGFGECLLAVALAGAPYQAVGLVQGTTPVLQG-LNGAVFRP 455
+SHS P GF C+ + L G P A + G TP + G L +F P
Sbjct: 3475 SSHSSKLPVTVGFSGCVKRLRLHGRPLGAPTRMAGVTPCILGPLEAGLFFP 3525
>gi|8923946 neutral sphingomyelin phosphodiesterase 3 [Homo sapiens]
Length = 655
Score = 30.0 bits (66), Expect = 5.5
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 17/92 (18%)
Query: 234 CARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQS 293
C + +GAL +Q G P+D+ +V + I+C HL A +++
Sbjct: 427 CNDDALASKGALFLKVQVGST------------PQDQRIVGY---IACTHLHAPQEDSAI 471
Query: 294 RCGEEIAVQ--FVDMVKGKSLTGVVNAQALTS 323
RCG+ +Q D K S + N + L +
Sbjct: 472 RCGQLDLLQDWLADFRKSTSSSSAANPEELVA 503
>gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform 2
[Homo sapiens]
Length = 642
Score = 29.6 bits (65), Expect = 7.2
Identities = 12/53 (22%), Positives = 29/53 (54%)
Query: 452 VFRPEVPLRRDLPLLLFRTQTSDPAMLPTMIGLLAEAGVRLLSYQTSLVSDGE 504
+F E+P+ + P+LL S+PA++ +I +L ++ + + ++ G+
Sbjct: 545 IFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQ 597
>gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 29.6 bits (65), Expect = 7.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 324 AFSPHTKPWIGLAEALGTLMRAWAGSPKGTIQVITQGTSLKNAGNCLSPAVIVGLL 379
A+S + PW A GTL R+ + +P G ++V+ + C P + GLL
Sbjct: 26 AWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLKSQET-----GCRDPLQLPGLL 76
>gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 29.6 bits (65), Expect = 7.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 324 AFSPHTKPWIGLAEALGTLMRAWAGSPKGTIQVITQGTSLKNAGNCLSPAVIVGLL 379
A+S + PW A GTL R+ + +P G ++V+ + C P + GLL
Sbjct: 26 AWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLKSQET-----GCRDPLQLPGLL 76
>gi|169213267 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 29.6 bits (65), Expect = 7.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 324 AFSPHTKPWIGLAEALGTLMRAWAGSPKGTIQVITQGTSLKNAGNCLSPAVIVGLL 379
A+S + PW A GTL R+ + +P G ++V+ + C P + GLL
Sbjct: 26 AWSSSSPPWRSPPSATGTLCRSCSLAPSGDLEVLKSQET-----GCRDPLQLPGLL 76
>gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1
[Homo sapiens]
Length = 684
Score = 29.6 bits (65), Expect = 7.2
Identities = 12/53 (22%), Positives = 29/53 (54%)
Query: 452 VFRPEVPLRRDLPLLLFRTQTSDPAMLPTMIGLLAEAGVRLLSYQTSLVSDGE 504
+F E+P+ + P+LL S+PA++ +I +L ++ + + ++ G+
Sbjct: 587 IFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQ 639
>gi|206597468 neural precursor cell expressed, developmentally
down-regulated 1 isoform b [Homo sapiens]
Length = 660
Score = 29.6 bits (65), Expect = 7.2
Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 8/91 (8%)
Query: 317 NAQALTSAFSPHTKPWIGLAEALGTLMRAWAGSPKGTIQVITQGTSLKNAGNCLSPAVIV 376
++ L F+PHT P G W+ + + + G + +C V +
Sbjct: 20 SSMTLVDKFNPHTSPH-------GISSICWSSNNNFLVTASSSGDKIV-VSSCKCKPVPL 71
Query: 377 GLLKEASKQADVNLVNAKLLVKEAGLNVTTS 407
L E KQ VNL + + + GLN T +
Sbjct: 72 LELAEGQKQTCVNLNSTSMYLVSGGLNNTVN 102
>gi|23097254 neural precursor cell expressed, developmentally
down-regulated 1 isoform b [Homo sapiens]
Length = 660
Score = 29.6 bits (65), Expect = 7.2
Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 8/91 (8%)
Query: 317 NAQALTSAFSPHTKPWIGLAEALGTLMRAWAGSPKGTIQVITQGTSLKNAGNCLSPAVIV 376
++ L F+PHT P G W+ + + + G + +C V +
Sbjct: 20 SSMTLVDKFNPHTSPH-------GISSICWSSNNNFLVTASSSGDKIV-VSSCKCKPVPL 71
Query: 377 GLLKEASKQADVNLVNAKLLVKEAGLNVTTS 407
L E KQ VNL + + + GLN T +
Sbjct: 72 LELAEGQKQTCVNLNSTSMYLVSGGLNNTVN 102
>gi|206597465 neural precursor cell expressed, developmentally
down-regulated 1 isoform a [Homo sapiens]
Length = 667
Score = 29.6 bits (65), Expect = 7.2
Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 8/91 (8%)
Query: 317 NAQALTSAFSPHTKPWIGLAEALGTLMRAWAGSPKGTIQVITQGTSLKNAGNCLSPAVIV 376
++ L F+PHT P G W+ + + + G + +C V +
Sbjct: 27 SSMTLVDKFNPHTSPH-------GISSICWSSNNNFLVTASSSGDKIV-VSSCKCKPVPL 78
Query: 377 GLLKEASKQADVNLVNAKLLVKEAGLNVTTS 407
L E KQ VNL + + + GLN T +
Sbjct: 79 LELAEGQKQTCVNLNSTSMYLVSGGLNNTVN 109
>gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens]
Length = 796
Score = 29.6 bits (65), Expect = 7.2
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 333 IGLAEALGTLMRAWAGSPK-GTIQVITQGTSLKNAGNCLSPAVIVGLLKEASKQADVNL 390
+ +A+ LGT A SPK G+ T ++ +N+ + +SPA + G + AS+ D+NL
Sbjct: 628 MSVADTLGT-----AHSPKDGSSVHSTTASARRNSSSPVSPASVPGQRRLASRNGDLNL 681
>gi|46909600 a disintegrin and metalloproteinase domain 15 isoform 6
preproprotein [Homo sapiens]
Length = 863
Score = 29.3 bits (64), Expect = 9.4
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 99 PNGNSLSAA--ELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELN 144
P+G+ +S + CG + C + S++D WE GTELN
Sbjct: 564 PSGSYVSCTPRDAICGQLQCQTGRTQPLLGSIRDLLWETIDVNGTELN 611
>gi|46909598 a disintegrin and metalloproteinase domain 15 isoform 5
preproprotein [Homo sapiens]
Length = 862
Score = 29.3 bits (64), Expect = 9.4
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 99 PNGNSLSAA--ELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELN 144
P+G+ +S + CG + C + S++D WE GTELN
Sbjct: 564 PSGSYVSCTPRDAICGQLQCQTGRTQPLLGSIRDLLWETIDVNGTELN 611
>gi|46909596 a disintegrin and metalloproteinase domain 15 isoform 4
preproprotein [Homo sapiens]
Length = 838
Score = 29.3 bits (64), Expect = 9.4
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 99 PNGNSLSAA--ELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELN 144
P+G+ +S + CG + C + S++D WE GTELN
Sbjct: 564 PSGSYVSCTPRDAICGQLQCQTGRTQPLLGSIRDLLWETIDVNGTELN 611
>gi|46909594 a disintegrin and metalloproteinase domain 15 isoform 3
preproprotein [Homo sapiens]
Length = 839
Score = 29.3 bits (64), Expect = 9.4
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 99 PNGNSLSAA--ELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELN 144
P+G+ +S + CG + C + S++D WE GTELN
Sbjct: 564 PSGSYVSCTPRDAICGQLQCQTGRTQPLLGSIRDLLWETIDVNGTELN 611
>gi|46909592 a disintegrin and metalloproteinase domain 15 isoform 1
preproprotein [Homo sapiens]
Length = 772
Score = 29.3 bits (64), Expect = 9.4
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 99 PNGNSLSAA--ELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELN 144
P+G+ +S + CG + C + S++D WE GTELN
Sbjct: 564 PSGSYVSCTPRDAICGQLQCQTGRTQPLLGSIRDLLWETIDVNGTELN 611
>gi|46909590 a disintegrin and metalloproteinase domain 15 isoform 2
preproprotein [Homo sapiens]
Length = 814
Score = 29.3 bits (64), Expect = 9.4
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 99 PNGNSLSAA--ELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELN 144
P+G+ +S + CG + C + S++D WE GTELN
Sbjct: 564 PSGSYVSCTPRDAICGQLQCQTGRTQPLLGSIRDLLWETIDVNGTELN 611
>gi|16751921 dermcidin preproprotein [Homo sapiens]
Length = 110
Score = 29.3 bits (64), Expect = 9.4
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Query: 76 AGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWER 135
AG V D EAA+ G P + +A + G LARQ P+ + +R
Sbjct: 13 AGALVCAYDPEAASAPG---SGNPCHEASAAQKENAGEDPGLARQAPKP-------RKQR 62
Query: 136 KKFMGTELNGKTLGILGLGRIGREVATRMQSFG 168
+ L+G + GLG++G++ ++S G
Sbjct: 63 SSLLEKGLDGAKKAVGGLGKLGKDAVEDLESVG 95
>gi|116006953 polycystin 1-like 2 isoform c [Homo sapiens]
Length = 991
Score = 29.3 bits (64), Expect = 9.4
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 394 KLLVKEAGLNVTTSHSPAAPGEQGFGECLLAVALAG 429
+L + AGLN T SH + GE FG C LAV + G
Sbjct: 481 ELTFEVAGLNATFSHEQVSFGEP-FGICRLAVPVEG 515
>gi|116006951 polycystin 1-like 2 isoform a [Homo sapiens]
Length = 2459
Score = 29.3 bits (64), Expect = 9.4
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 394 KLLVKEAGLNVTTSHSPAAPGEQGFGECLLAVALAG 429
+L + AGLN T SH + GE FG C LAV + G
Sbjct: 481 ELTFEVAGLNATFSHEQVSFGEP-FGICRLAVPVEG 515
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,966,532
Number of Sequences: 37866
Number of extensions: 811722
Number of successful extensions: 1961
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1931
Number of HSP's gapped (non-prelim): 34
length of query: 533
length of database: 18,247,518
effective HSP length: 107
effective length of query: 426
effective length of database: 14,195,856
effective search space: 6047434656
effective search space used: 6047434656
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.