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Search of human proteins with 231571356
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|231571356 nitric oxide synthase 3 isoform 4 [Homo sapiens]
(629 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|231571356 nitric oxide synthase 3 isoform 4 [Homo sapiens] 1303 0.0
gi|231571329 nitric oxide synthase 3 isoform 3 [Homo sapiens] 1215 0.0
gi|231571314 nitric oxide synthase 3 isoform 2 [Homo sapiens] 1211 0.0
gi|40254422 nitric oxide synthase 3 isoform 1 [Homo sapiens] 1209 0.0
gi|10835173 nitric oxide synthase 1, neuronal [Homo sapiens] 724 0.0
gi|24041029 nitric oxide synthase 2A [Homo sapiens] 637 0.0
gi|78000165 sorbin and SH3 domain containing 1 isoform 4 [Homo s... 60 5e-09
gi|221316707 NADPH dependent diflavin oxidoreductase 1 isoform d... 57 4e-08
gi|221316709 NADPH dependent diflavin oxidoreductase 1 isoform c... 57 4e-08
gi|221316705 NADPH dependent diflavin oxidoreductase 1 isoform a... 57 4e-08
gi|7657393 NADPH dependent diflavin oxidoreductase 1 isoform b [... 57 4e-08
gi|148839316 NIMA-related kinase 4 [Homo sapiens] 56 1e-07
gi|66348062 fumarylacetoacetate hydrolase domain containing 1 is... 54 3e-07
gi|187608508 centromere protein L isoform 1 [Homo sapiens] 52 2e-06
gi|28372523 intraflagellar transport protein IFT20 [Homo sapiens] 52 2e-06
gi|118442834 RPGRIP1-like isoform a [Homo sapiens] 51 3e-06
gi|111118986 alpha-1A-adrenergic receptor isoform 2 [Homo sapiens] 51 4e-06
gi|61969666 arginine-fifty homeobox [Homo sapiens] 50 5e-06
gi|239744440 PREDICTED: hypothetical protein XP_002343124 [Homo ... 50 8e-06
gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens] 48 3e-05
gi|6005810 mitogen-activated protein kinase kinase kinase kinase... 47 4e-05
gi|34147403 intraflagellar transport 81-like isoform 2 [Homo sap... 47 4e-05
gi|239755619 PREDICTED: hypothetical protein [Homo sapiens] 47 5e-05
gi|239750132 PREDICTED: hypothetical protein XP_002347267 [Homo ... 47 5e-05
gi|148236061 hypothetical protein LOC285501 [Homo sapiens] 47 5e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 47 7e-05
gi|219881538 hypothetical protein LOC199870 isoform 2 [Homo sapi... 45 2e-04
gi|219881536 hypothetical protein LOC199870 isoform 1 [Homo sapi... 45 2e-04
gi|112421108 capicua homolog [Homo sapiens] 45 3e-04
gi|170932471 hypothetical protein LOC79703 [Homo sapiens] 45 3e-04
>gi|231571356 nitric oxide synthase 3 isoform 4 [Homo sapiens]
Length = 629
Score = 1303 bits (3371), Expect = 0.0
Identities = 629/629 (100%), Positives = 629/629 (100%)
Query: 1 MGNLKSVAQEPGPPCGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLT 60
MGNLKSVAQEPGPPCGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLT
Sbjct: 1 MGNLKSVAQEPGPPCGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLT 60
Query: 61 QPPEGPKFPRVKNWEVGSITYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAP 120
QPPEGPKFPRVKNWEVGSITYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAP
Sbjct: 61 QPPEGPKFPRVKNWEVGSITYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAP 120
Query: 121 EQLLSQARDFINQYYSSIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRN 180
EQLLSQARDFINQYYSSIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRN
Sbjct: 121 EQLLSQARDFINQYYSSIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRN 180
Query: 181 APRCVGRIQWGKLQVFDARDCRSAQEMFTYICNHIKYATNRGNLRSAITVFPQRCPGRGD 240
APRCVGRIQWGKLQVFDARDCRSAQEMFTYICNHIKYATNRGNLRSAITVFPQRCPGRGD
Sbjct: 181 APRCVGRIQWGKLQVFDARDCRSAQEMFTYICNHIKYATNRGNLRSAITVFPQRCPGRGD 240
Query: 241 FRIWNSQLVRYAGYRQQDGSVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDDPP 300
FRIWNSQLVRYAGYRQQDGSVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDDPP
Sbjct: 241 FRIWNSQLVRYAGYRQQDGSVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDDPP 300
Query: 301 ELFLLPPELVLEVPLEHPTLEWFAALGLRWYALPAVSNMLLEIGGLEFPAAPFSGWYMST 360
ELFLLPPELVLEVPLEHPTLEWFAALGLRWYALPAVSNMLLEIGGLEFPAAPFSGWYMST
Sbjct: 301 ELFLLPPELVLEVPLEHPTLEWFAALGLRWYALPAVSNMLLEIGGLEFPAAPFSGWYMST 360
Query: 361 EIGTRNLCDPHRYNILEDVAVCMDLDTRTTSSLWKDKAAVEINVAVLHSYQLAKVTIVDH 420
EIGTRNLCDPHRYNILEDVAVCMDLDTRTTSSLWKDKAAVEINVAVLHSYQLAKVTIVDH
Sbjct: 361 EIGTRNLCDPHRYNILEDVAVCMDLDTRTTSSLWKDKAAVEINVAVLHSYQLAKVTIVDH 420
Query: 421 HAATASFMKHLENEQKARGGCPADWAWIVPPISGSLTPVFHQEMVNYFLSPAFRYQPDPW 480
HAATASFMKHLENEQKARGGCPADWAWIVPPISGSLTPVFHQEMVNYFLSPAFRYQPDPW
Sbjct: 421 HAATASFMKHLENEQKARGGCPADWAWIVPPISGSLTPVFHQEMVNYFLSPAFRYQPDPW 480
Query: 481 KGSAAKGTGITRKKTFKEVANAVKISASLMGTVMAKRVKATILYGSETGRAQSYAQQLGR 540
KGSAAKGTGITRKKTFKEVANAVKISASLMGTVMAKRVKATILYGSETGRAQSYAQQLGR
Sbjct: 481 KGSAAKGTGITRKKTFKEVANAVKISASLMGTVMAKRVKATILYGSETGRAQSYAQQLGR 540
Query: 541 LFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGEGLTLWPRLECSSTITA 600
LFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGEGLTLWPRLECSSTITA
Sbjct: 541 LFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGEGLTLWPRLECSSTITA 600
Query: 601 HCSLNLLDSSNPPTSTSQVVGTTGACHDA 629
HCSLNLLDSSNPPTSTSQVVGTTGACHDA
Sbjct: 601 HCSLNLLDSSNPPTSTSQVVGTTGACHDA 629
>gi|231571329 nitric oxide synthase 3 isoform 3 [Homo sapiens]
Length = 614
Score = 1215 bits (3143), Expect = 0.0
Identities = 590/602 (98%), Positives = 593/602 (98%), Gaps = 2/602 (0%)
Query: 1 MGNLKSVAQEPGPPCGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLT 60
MGNLKSVAQEPGPPCGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLT
Sbjct: 1 MGNLKSVAQEPGPPCGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLT 60
Query: 61 QPPEGPKFPRVKNWEVGSITYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAP 120
QPPEGPKFPRVKNWEVGSITYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAP
Sbjct: 61 QPPEGPKFPRVKNWEVGSITYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAP 120
Query: 121 EQLLSQARDFINQYYSSIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRN 180
EQLLSQARDFINQYYSSIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRN
Sbjct: 121 EQLLSQARDFINQYYSSIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRN 180
Query: 181 APRCVGRIQWGKLQVFDARDCRSAQEMFTYICNHIKYATNRGNLRSAITVFPQRCPGRGD 240
APRCVGRIQWGKLQVFDARDCRSAQEMFTYICNHIKYATNRGNLRSAITVFPQRCPGRGD
Sbjct: 181 APRCVGRIQWGKLQVFDARDCRSAQEMFTYICNHIKYATNRGNLRSAITVFPQRCPGRGD 240
Query: 241 FRIWNSQLVRYAGYRQQDGSVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDDPP 300
FRIWNSQLVRYAGYRQQDGSVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDDPP
Sbjct: 241 FRIWNSQLVRYAGYRQQDGSVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDDPP 300
Query: 301 ELFLLPPELVLEVPLEHPTLEWFAALGLRWYALPAVSNMLLEIGGLEFPAAPFSGWYMST 360
ELFLLPPELVLEVPLEHPTLEWFAALGLRWYALPAVSNMLLEIGGLEFPAAPFSGWYMST
Sbjct: 301 ELFLLPPELVLEVPLEHPTLEWFAALGLRWYALPAVSNMLLEIGGLEFPAAPFSGWYMST 360
Query: 361 EIGTRNLCDPHRYNILEDVAVCMDLDTRTTSSLWKDKAAVEINVAVLHSYQLAKVTIVDH 420
EIGTRNLCDPHRYNILEDVAVCMDLDTRTTSSLWKDKAAVEINVAVLHSYQLAKVTIVDH
Sbjct: 361 EIGTRNLCDPHRYNILEDVAVCMDLDTRTTSSLWKDKAAVEINVAVLHSYQLAKVTIVDH 420
Query: 421 HAATASFMKHLENEQKARGGCPADWAWIVPPISGSLTPVFHQEMVNYFLSPAFRYQPDPW 480
HAATASFMKHLENEQKARGGCPADWAWIVPPISGSLTPVFHQEMVNYFLSPAFRYQPDPW
Sbjct: 421 HAATASFMKHLENEQKARGGCPADWAWIVPPISGSLTPVFHQEMVNYFLSPAFRYQPDPW 480
Query: 481 KGSAAKGTGITRKKTFKEVANAVKISASLMGTVMAKRVKATILYGSETGRAQSYAQQLGR 540
KGSAAKGTGITRKKTFKEVANAVKISASLMGTVMAKRVKATILYGSETGRAQSYAQQLGR
Sbjct: 481 KGSAAKGTGITRKKTFKEVANAVKISASLMGTVMAKRVKATILYGSETGRAQSYAQQLGR 540
Query: 541 LFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGE--GLTLWPRLECSSTI 598
LFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGE G + PRL +S +
Sbjct: 541 LFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGERWGFAMLPRLVSNSWV 600
Query: 599 TA 600
A
Sbjct: 601 QA 602
>gi|231571314 nitric oxide synthase 3 isoform 2 [Homo sapiens]
Length = 596
Score = 1211 bits (3134), Expect = 0.0
Identities = 585/588 (99%), Positives = 587/588 (99%)
Query: 1 MGNLKSVAQEPGPPCGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLT 60
MGNLKSVAQEPGPPCGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLT
Sbjct: 1 MGNLKSVAQEPGPPCGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLT 60
Query: 61 QPPEGPKFPRVKNWEVGSITYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAP 120
QPPEGPKFPRVKNWEVGSITYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAP
Sbjct: 61 QPPEGPKFPRVKNWEVGSITYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAP 120
Query: 121 EQLLSQARDFINQYYSSIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRN 180
EQLLSQARDFINQYYSSIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRN
Sbjct: 121 EQLLSQARDFINQYYSSIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRN 180
Query: 181 APRCVGRIQWGKLQVFDARDCRSAQEMFTYICNHIKYATNRGNLRSAITVFPQRCPGRGD 240
APRCVGRIQWGKLQVFDARDCRSAQEMFTYICNHIKYATNRGNLRSAITVFPQRCPGRGD
Sbjct: 181 APRCVGRIQWGKLQVFDARDCRSAQEMFTYICNHIKYATNRGNLRSAITVFPQRCPGRGD 240
Query: 241 FRIWNSQLVRYAGYRQQDGSVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDDPP 300
FRIWNSQLVRYAGYRQQDGSVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDDPP
Sbjct: 241 FRIWNSQLVRYAGYRQQDGSVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDDPP 300
Query: 301 ELFLLPPELVLEVPLEHPTLEWFAALGLRWYALPAVSNMLLEIGGLEFPAAPFSGWYMST 360
ELFLLPPELVLEVPLEHPTLEWFAALGLRWYALPAVSNMLLEIGGLEFPAAPFSGWYMST
Sbjct: 301 ELFLLPPELVLEVPLEHPTLEWFAALGLRWYALPAVSNMLLEIGGLEFPAAPFSGWYMST 360
Query: 361 EIGTRNLCDPHRYNILEDVAVCMDLDTRTTSSLWKDKAAVEINVAVLHSYQLAKVTIVDH 420
EIGTRNLCDPHRYNILEDVAVCMDLDTRTTSSLWKDKAAVEINVAVLHSYQLAKVTIVDH
Sbjct: 361 EIGTRNLCDPHRYNILEDVAVCMDLDTRTTSSLWKDKAAVEINVAVLHSYQLAKVTIVDH 420
Query: 421 HAATASFMKHLENEQKARGGCPADWAWIVPPISGSLTPVFHQEMVNYFLSPAFRYQPDPW 480
HAATASFMKHLENEQKARGGCPADWAWIVPPISGSLTPVFHQEMVNYFLSPAFRYQPDPW
Sbjct: 421 HAATASFMKHLENEQKARGGCPADWAWIVPPISGSLTPVFHQEMVNYFLSPAFRYQPDPW 480
Query: 481 KGSAAKGTGITRKKTFKEVANAVKISASLMGTVMAKRVKATILYGSETGRAQSYAQQLGR 540
KGSAAKGTGITRKKTFKEVANAVKISASLMGTVMAKRVKATILYGSETGRAQSYAQQLGR
Sbjct: 481 KGSAAKGTGITRKKTFKEVANAVKISASLMGTVMAKRVKATILYGSETGRAQSYAQQLGR 540
Query: 541 LFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGEGLTL 588
LFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGE ++L
Sbjct: 541 LFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGESVSL 588
>gi|40254422 nitric oxide synthase 3 isoform 1 [Homo sapiens]
Length = 1203
Score = 1209 bits (3128), Expect = 0.0
Identities = 584/584 (100%), Positives = 584/584 (100%)
Query: 1 MGNLKSVAQEPGPPCGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLT 60
MGNLKSVAQEPGPPCGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLT
Sbjct: 1 MGNLKSVAQEPGPPCGLGLGLGLGLCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLT 60
Query: 61 QPPEGPKFPRVKNWEVGSITYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAP 120
QPPEGPKFPRVKNWEVGSITYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAP
Sbjct: 61 QPPEGPKFPRVKNWEVGSITYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAP 120
Query: 121 EQLLSQARDFINQYYSSIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRN 180
EQLLSQARDFINQYYSSIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRN
Sbjct: 121 EQLLSQARDFINQYYSSIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRN 180
Query: 181 APRCVGRIQWGKLQVFDARDCRSAQEMFTYICNHIKYATNRGNLRSAITVFPQRCPGRGD 240
APRCVGRIQWGKLQVFDARDCRSAQEMFTYICNHIKYATNRGNLRSAITVFPQRCPGRGD
Sbjct: 181 APRCVGRIQWGKLQVFDARDCRSAQEMFTYICNHIKYATNRGNLRSAITVFPQRCPGRGD 240
Query: 241 FRIWNSQLVRYAGYRQQDGSVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDDPP 300
FRIWNSQLVRYAGYRQQDGSVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDDPP
Sbjct: 241 FRIWNSQLVRYAGYRQQDGSVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDDPP 300
Query: 301 ELFLLPPELVLEVPLEHPTLEWFAALGLRWYALPAVSNMLLEIGGLEFPAAPFSGWYMST 360
ELFLLPPELVLEVPLEHPTLEWFAALGLRWYALPAVSNMLLEIGGLEFPAAPFSGWYMST
Sbjct: 301 ELFLLPPELVLEVPLEHPTLEWFAALGLRWYALPAVSNMLLEIGGLEFPAAPFSGWYMST 360
Query: 361 EIGTRNLCDPHRYNILEDVAVCMDLDTRTTSSLWKDKAAVEINVAVLHSYQLAKVTIVDH 420
EIGTRNLCDPHRYNILEDVAVCMDLDTRTTSSLWKDKAAVEINVAVLHSYQLAKVTIVDH
Sbjct: 361 EIGTRNLCDPHRYNILEDVAVCMDLDTRTTSSLWKDKAAVEINVAVLHSYQLAKVTIVDH 420
Query: 421 HAATASFMKHLENEQKARGGCPADWAWIVPPISGSLTPVFHQEMVNYFLSPAFRYQPDPW 480
HAATASFMKHLENEQKARGGCPADWAWIVPPISGSLTPVFHQEMVNYFLSPAFRYQPDPW
Sbjct: 421 HAATASFMKHLENEQKARGGCPADWAWIVPPISGSLTPVFHQEMVNYFLSPAFRYQPDPW 480
Query: 481 KGSAAKGTGITRKKTFKEVANAVKISASLMGTVMAKRVKATILYGSETGRAQSYAQQLGR 540
KGSAAKGTGITRKKTFKEVANAVKISASLMGTVMAKRVKATILYGSETGRAQSYAQQLGR
Sbjct: 481 KGSAAKGTGITRKKTFKEVANAVKISASLMGTVMAKRVKATILYGSETGRAQSYAQQLGR 540
Query: 541 LFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGE 584
LFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGE
Sbjct: 541 LFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGE 584
>gi|10835173 nitric oxide synthase 1, neuronal [Homo sapiens]
Length = 1434
Score = 724 bits (1870), Expect = 0.0
Identities = 350/548 (63%), Positives = 419/548 (76%), Gaps = 11/548 (2%)
Query: 47 PPAPEHSPPSSPLTQPPEG------PKFPRVKNWEVGSITYDTLSAQAQQDGPCTPRRCL 100
P + + PP+S P + P+F +VKNWE + DTL ++ + CT C+
Sbjct: 278 PYSEKEQPPTSGKQSPTKNGSPSKCPRFLKVKNWETEVVLTDTLHLKSTLETGCTEYICM 337
Query: 101 GSLVFPRKLQGRPSPGPPAPEQLLSQARDFINQYYSSIKRSGSQAHEQRLQEVEAEVAAT 160
GS++ P + RP QL A++FI+QYYSSIKR GS+AH +RL+EV E+ T
Sbjct: 338 GSIMHPSQHARRPED-VRTKGQLFPLAKEFIDQYYSSIKRFGSKAHMERLEEVNKEIDTT 396
Query: 161 GTYQLRESELVFGAKQAWRNAPRCVGRIQWGKLQVFDARDCRSAQEMFTYICNHIKYATN 220
TYQL+++EL++GAK AWRNA RCVGRIQW KLQVFDARDC +A MF YICNH+KYATN
Sbjct: 397 STYQLKDTELIYGAKHAWRNASRCVGRIQWSKLQVFDARDCTTAHGMFNYICNHVKYATN 456
Query: 221 RGNLRSAITVFPQRCPGRGDFRIWNSQLVRYAGYRQQDGSVRGDPANVEITELCIQHGWT 280
+GNLRSAIT+FPQR G+ DFR+WNSQL+RYAGY+Q DGS GDPANV+ TE+CIQ GW
Sbjct: 457 KGNLRSAITIFPQRTDGKHDFRVWNSQLIRYAGYKQPDGSTLGDPANVQFTEICIQQGWK 516
Query: 281 PGNGRFDVLPLLLQAPDDPPELFLLPPELVLEVPLEHPTLEWFAALGLRWYALPAVSNML 340
P GRFDVLPLLLQA + PELF +PPELVLEVP+ HP EWF LGL+WY LPAVSNML
Sbjct: 517 PPRGRFDVLPLLLQANGNDPELFQIPPELVLEVPIRHPKFEWFKDLGLKWYGLPAVSNML 576
Query: 341 LEIGGLEFPAAPFSGWYMSTEIGTRNLCDPHRYNILEDVAVCMDLDTRTTSSLWKDKAAV 400
LEIGGLEF A PFSGWYM TEIG R+ CD RYNILE+VA M+LD R TSSLWKD+A V
Sbjct: 577 LEIGGLEFSACPFSGWYMGTEIGVRDYCDNSRYNILEEVAKKMNLDMRKTSSLWKDQALV 636
Query: 401 EINVAVLHSYQLAKVTIVDHHAATASFMKHLENEQKARGGCPADWAWIVPPISGSLTPVF 460
EIN+AVL+S+Q KVTIVDHH+AT SF+KH+ENE + RGGCPADW WIVPP+SGS+TPVF
Sbjct: 637 EINIAVLYSFQSDKVTIVDHHSATESFIKHMENEYRCRGGCPADWVWIVPPMSGSITPVF 696
Query: 461 HQEMVNYFLSPAFRYQPDPWKGSAAKGTGITRKKT----FKEVANAVKISASLMGTVMAK 516
HQEM+NY L+P+F YQPDPW KGT T K FK++A AVK SA LMG MAK
Sbjct: 697 HQEMLNYRLTPSFEYQPDPWNTHVWKGTNGTPTKRRAIGFKKLAEAVKFSAKLMGQAMAK 756
Query: 517 RVKATILYGSETGRAQSYAQQLGRLFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGN 576
RVKATILY +ETG++Q+YA+ L +F+ AFD +V+ M+EYD+V LEHETLVLVVTSTFGN
Sbjct: 757 RVKATILYATETGKSQAYAKTLCEIFKHAFDAKVMSMEEYDIVHLEHETLVLVVTSTFGN 816
Query: 577 GDPPENGE 584
GDPPENGE
Sbjct: 817 GDPPENGE 824
>gi|24041029 nitric oxide synthase 2A [Homo sapiens]
Length = 1153
Score = 637 bits (1642), Expect = 0.0
Identities = 302/528 (57%), Positives = 380/528 (71%), Gaps = 3/528 (0%)
Query: 62 PPEGPKFPRVKNWEVGSITYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAPE 121
P P+ R+KNW G DTL +A+ C + CLGS++ P+ L P P P+
Sbjct: 78 PLSSPRHVRIKNWGSGMTFQDTLHHKAKGILTCRSKSCLGSIMTPKSLTRGPRDKPTPPD 137
Query: 122 QLLSQARDFINQYYSSIKRSGSQAHEQRLQEVEAEVAATGTYQLRESELVFGAKQAWRNA 181
+LL QA +F+NQYY S K + + H R++ V E+ TGTYQL EL+F KQAWRNA
Sbjct: 138 ELLPQAIEFVNQYYGSFKEAKIEEHLARVEAVTKEIETTGTYQLTGDELIFATKQAWRNA 197
Query: 182 PRCVGRIQWGKLQVFDARDCRSAQEMFTYICNHIKYATNRGNLRSAITVFPQRCPGRGDF 241
PRC+GRIQW LQVFDAR C +A+EMF +IC H++Y+TN GN+RSAITVFPQR G+ DF
Sbjct: 198 PRCIGRIQWSNLQVFDARSCSTAREMFEHICRHVRYSTNNGNIRSAITVFPQRSDGKHDF 257
Query: 242 RIWNSQLVRYAGYRQQDGSVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDDPPE 301
R+WN+QL+RYAGY+ DGS+RGDPANVE T+LCI GW P GRFDV+PL+LQA PE
Sbjct: 258 RVWNAQLIRYAGYQMPDGSIRGDPANVEFTQLCIDLGWKPKYGRFDVVPLVLQANGRDPE 317
Query: 302 LFLLPPELVLEVPLEHPTLEWFAALGLRWYALPAVSNMLLEIGGLEFPAAPFSGWYMSTE 361
LF +PP+LVLEV +EHP EWF L L+WYALPAV+NMLLE+GGLEFP PF+GWYM TE
Sbjct: 318 LFEIPPDLVLEVAMEHPKYEWFRELELKWYALPAVANMLLEVGGLEFPGCPFNGWYMGTE 377
Query: 362 IGTRNLCDPHRYNILEDVAVCMDLDTRTTSSLWKDKAAVEINVAVLHSYQLAKVTIVDHH 421
IG R+ CD RYNILE+V M L+T +SLWKD+A VEIN+AVLHS+Q VTI+DHH
Sbjct: 378 IGVRDFCDVQRYNILEEVGRRMGLETHKLASLWKDQAVVEINIAVLHSFQKQNVTIMDHH 437
Query: 422 AATASFMKHLENEQKARGGCPADWAWIVPPISGSLTPVFHQEMVNYFLSPAFRYQPDPWK 481
+A SFMK+++NE ++RGGCPADW W+VPP+SGS+TPVFHQEM+NY LSP + YQ + WK
Sbjct: 438 SAAESFMKYMQNEYRSRGGCPADWIWLVPPMSGSITPVFHQEMLNYVLSPFYYYQVEAWK 497
Query: 482 GSA---AKGTGITRKKTFKEVANAVKISASLMGTVMAKRVKATILYGSETGRAQSYAQQL 538
K R+ K + AV + LM MA RV+ TIL+ +ETG++++ A L
Sbjct: 498 THVWQDEKRRPKRREIPLKVLVKAVLFACMLMRKTMASRVRVTILFATETGKSEALAWDL 557
Query: 539 GRLFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGEGL 586
G LF AF+P+V+CMD+Y + LE E L+LVVTSTFGNGD P NGE L
Sbjct: 558 GALFSCAFNPKVVCMDKYRLSCLEEERLLLVVTSTFGNGDCPGNGEKL 605
>gi|78000165 sorbin and SH3 domain containing 1 isoform 4 [Homo
sapiens]
Length = 1151
Score = 60.5 bits (145), Expect = 5e-09
Identities = 27/33 (81%), Positives = 28/33 (84%)
Query: 590 PRLECSSTITAHCSLNLLDSSNPPTSTSQVVGT 622
PRLECS T+ AHCSL LLDSSNPPTS SQV GT
Sbjct: 442 PRLECSGTVIAHCSLKLLDSSNPPTSASQVAGT 474
>gi|221316707 NADPH dependent diflavin oxidoreductase 1 isoform d
[Homo sapiens]
Length = 521
Score = 57.4 bits (137), Expect = 4e-08
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 522 ILYGSETGRAQSYAQQLGR-LFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPP 580
+L+GS+TG AQ +++LGR R+ RV +D Y VV+L +E LV+ V +T G GDPP
Sbjct: 8 VLFGSQTGTAQDVSERLGREARRRRLGCRVQALDSYPVVNLINEPLVIFVCATTGQGDPP 67
Query: 581 EN 582
+N
Sbjct: 68 DN 69
>gi|221316709 NADPH dependent diflavin oxidoreductase 1 isoform c
[Homo sapiens]
Length = 590
Score = 57.4 bits (137), Expect = 4e-08
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 522 ILYGSETGRAQSYAQQLGR-LFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPP 580
+L+GS+TG AQ +++LGR R+ RV +D Y VV+L +E LV+ V +T G GDPP
Sbjct: 8 VLFGSQTGTAQDVSERLGREARRRRLGCRVQALDSYPVVNLINEPLVIFVCATTGQGDPP 67
Query: 581 EN 582
+N
Sbjct: 68 DN 69
>gi|221316705 NADPH dependent diflavin oxidoreductase 1 isoform a
[Homo sapiens]
Length = 606
Score = 57.4 bits (137), Expect = 4e-08
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 522 ILYGSETGRAQSYAQQLGR-LFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPP 580
+L+GS+TG AQ +++LGR R+ RV +D Y VV+L +E LV+ V +T G GDPP
Sbjct: 8 VLFGSQTGTAQDVSERLGREARRRRLGCRVQALDSYPVVNLINEPLVIFVCATTGQGDPP 67
Query: 581 EN 582
+N
Sbjct: 68 DN 69
>gi|7657393 NADPH dependent diflavin oxidoreductase 1 isoform b
[Homo sapiens]
Length = 597
Score = 57.4 bits (137), Expect = 4e-08
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 522 ILYGSETGRAQSYAQQLGR-LFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPP 580
+L+GS+TG AQ +++LGR R+ RV +D Y VV+L +E LV+ V +T G GDPP
Sbjct: 8 VLFGSQTGTAQDVSERLGREARRRRLGCRVQALDSYPVVNLINEPLVIFVCATTGQGDPP 67
Query: 581 EN 582
+N
Sbjct: 68 DN 69
>gi|148839316 NIMA-related kinase 4 [Homo sapiens]
Length = 841
Score = 55.8 bits (133), Expect = 1e-07
Identities = 26/46 (56%), Positives = 31/46 (67%)
Query: 584 EGLTLWPRLECSSTITAHCSLNLLDSSNPPTSTSQVVGTTGACHDA 629
+ L L P+LECS TI AH +L LL SS+ P S S+V G TG CH A
Sbjct: 456 QSLALSPKLECSGTILAHSNLRLLGSSDSPASASRVAGITGVCHHA 501
>gi|66348062 fumarylacetoacetate hydrolase domain containing 1
isoform 1 [Homo sapiens]
Length = 248
Score = 54.3 bits (129), Expect = 3e-07
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 11/69 (15%)
Query: 558 VVSLEHETLVLVVTSTFGNGDPPENGE----------GLTLWPRLECSSTITAHCSLNLL 607
+++LE ++L T G G EN E GLTL P+LECSS ITAHCSL L
Sbjct: 179 IITLEEGDIILTGTPK-GVGPVKENDEIEAGIHGLRQGLTLSPKLECSSAITAHCSLELP 237
Query: 608 DSSNPPTST 616
SSNPP+++
Sbjct: 238 GSSNPPSAS 246
>gi|187608508 centromere protein L isoform 1 [Homo sapiens]
Length = 390
Score = 52.0 bits (123), Expect = 2e-06
Identities = 26/44 (59%), Positives = 29/44 (65%)
Query: 584 EGLTLWPRLECSSTITAHCSLNLLDSSNPPTSTSQVVGTTGACH 627
+GL L PRLE S TI C+L LL SS+P T QV GT GACH
Sbjct: 140 QGLILSPRLEYSGTILVDCNLCLLGSSDPSTLAFQVAGTAGACH 183
>gi|28372523 intraflagellar transport protein IFT20 [Homo sapiens]
Length = 148
Score = 51.6 bits (122), Expect = 2e-06
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 581 ENGEGLTLWPRLECSSTITAHCSLNLLDSSNPPTSTSQVVGTTG 624
E + L + PRLEC+ I+AHC L L DSS+ PTS S+V GTTG
Sbjct: 68 EKMKSLAVSPRLECTGAISAHCKLCLSDSSDSPTSPSRVGGTTG 111
>gi|118442834 RPGRIP1-like isoform a [Homo sapiens]
Length = 1315
Score = 51.2 bits (121), Expect = 3e-06
Identities = 25/44 (56%), Positives = 29/44 (65%)
Query: 584 EGLTLWPRLECSSTITAHCSLNLLDSSNPPTSTSQVVGTTGACH 627
+ L L P L CSS I+AHC+ L SS+ P S SQV G TGACH
Sbjct: 1098 QSLALSPGLGCSSAISAHCNFRLPGSSDFPASASQVDGITGACH 1141
>gi|111118986 alpha-1A-adrenergic receptor isoform 2 [Homo sapiens]
Length = 475
Score = 50.8 bits (120), Expect = 4e-06
Identities = 23/39 (58%), Positives = 25/39 (64%)
Query: 591 RLECSSTITAHCSLNLLDSSNPPTSTSQVVGTTGACHDA 629
RLECS I AHC+L L S + P S SQ GTTG CH A
Sbjct: 431 RLECSGMILAHCNLRLPGSRDSPASASQAAGTTGMCHQA 469
>gi|61969666 arginine-fifty homeobox [Homo sapiens]
Length = 315
Score = 50.4 bits (119), Expect = 5e-06
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 579 PPEN--GEGLTLWPRLECSSTITAHCSLNLLDSSNPPTSTSQVVGTT 623
PP++ TL +LECS T++A+CSLNL S++PPTS S+V TT
Sbjct: 27 PPQDPASPSFTLLSKLECSGTVSAYCSLNLPGSTDPPTSASRVAATT 73
>gi|239744440 PREDICTED: hypothetical protein XP_002343124 [Homo
sapiens]
Length = 261
Score = 49.7 bits (117), Expect = 8e-06
Identities = 24/38 (63%), Positives = 28/38 (73%)
Query: 584 EGLTLWPRLECSSTITAHCSLNLLDSSNPPTSTSQVVG 621
EGL L+PRLE S TI+A C+L LL SS+ P S SQV G
Sbjct: 6 EGLALYPRLEFSGTISARCNLRLLGSSDSPASASQVAG 43
>gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens]
Length = 638
Score = 47.8 bits (112), Expect = 3e-05
Identities = 22/35 (62%), Positives = 26/35 (74%)
Query: 591 RLECSSTITAHCSLNLLDSSNPPTSTSQVVGTTGA 625
RLECS I+AHCSL+L SS+ P S SQ+ GTT A
Sbjct: 8 RLECSGAISAHCSLHLPGSSDSPASASQIAGTTDA 42
>gi|6005810 mitogen-activated protein kinase kinase kinase kinase 1
isoform 2 [Homo sapiens]
Length = 833
Score = 47.4 bits (111), Expect = 4e-05
Identities = 22/35 (62%), Positives = 25/35 (71%)
Query: 590 PRLECSSTITAHCSLNLLDSSNPPTSTSQVVGTTG 624
PRLECS TI+ HC+L L SSN P S S+V G TG
Sbjct: 798 PRLECSGTISPHCNLLLPGSSNSPASASRVAGITG 832
>gi|34147403 intraflagellar transport 81-like isoform 2 [Homo
sapiens]
Length = 431
Score = 47.4 bits (111), Expect = 4e-05
Identities = 36/93 (38%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 529 GRAQSYAQQLGRLFRKA-FDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGE--- 584
G+ Y QQ + RK L + + SLE E V + +G G+
Sbjct: 339 GKLSLYRQQASIISRKKEAKAEELQEAKEKLASLEREASVKRNQTREFDGTEVLKGDERQ 398
Query: 585 GLTLWPRLECSSTITAHCSLNLLDSSNPPTSTS 617
LTL PRLEC I A+CSL LL SS+PPTS S
Sbjct: 399 DLTLSPRLECGGVIMAYCSLKLLGSSDPPTSAS 431
>gi|239755619 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 47.0 bits (110), Expect = 5e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 584 EGLTLWPRLECSSTITAHCSLNLLDSSNPPTSTSQVVG 621
EGL +PRLE S TI+A C+L LL SS+ P S SQV G
Sbjct: 6 EGLAPYPRLEFSGTISARCNLRLLGSSDSPASASQVAG 43
>gi|239750132 PREDICTED: hypothetical protein XP_002347267 [Homo
sapiens]
Length = 261
Score = 47.0 bits (110), Expect = 5e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 584 EGLTLWPRLECSSTITAHCSLNLLDSSNPPTSTSQVVG 621
EGL +PRLE S TI+A C+L LL SS+ P S SQV G
Sbjct: 6 EGLAPYPRLEFSGTISARCNLRLLGSSDSPASASQVAG 43
>gi|148236061 hypothetical protein LOC285501 [Homo sapiens]
Length = 109
Score = 47.0 bits (110), Expect = 5e-05
Identities = 22/34 (64%), Positives = 25/34 (73%)
Query: 591 RLECSSTITAHCSLNLLDSSNPPTSTSQVVGTTG 624
+LECS I AHC+L LL S +P TS SQV GTTG
Sbjct: 21 KLECSGPILAHCNLCLLGSRHPSTSASQVAGTTG 54
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 46.6 bits (109), Expect = 7e-05
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 23/106 (21%)
Query: 28 KQGPATPAPEPSRAPASLLPPAPEHSPPSSPLTQ---------PPEGPKFPRVKNWEVGS 78
K GPATP+P+ + P ++ PP+P+ SP ++P + PP P G+
Sbjct: 997 KGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGA 1056
Query: 79 ITYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSP---GPPAPE 121
T + + + GP TP L+G P+P PP+P+
Sbjct: 1057 PTTPAATLPSPKGGPATP-----------SLKGAPTPPAATPPSPK 1091
Score = 42.4 bits (98), Expect = 0.001
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 8/101 (7%)
Query: 28 KQGPATPAPEPSRAPASLLPPAPEHSP--------PSSPLTQPPEGPKFPRVKNWEVGSI 79
K GPATP+P+ + P + PP+P+ P P+ P PP P + G+
Sbjct: 974 KGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGAS 1033
Query: 80 TYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAP 120
T + + + P G+ P P GP P
Sbjct: 1034 TPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATP 1074
Score = 42.0 bits (97), Expect = 0.002
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 22/105 (20%)
Query: 28 KQGPATPAPEPSRAPASLLPPAPEHSP--------PSSPLTQPPE---GPKFPRVKNWEV 76
K GPATP+P+ + P + PP+P+ P P+ P PP GP P K
Sbjct: 951 KGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPK---- 1006
Query: 77 GSITYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAPE 121
G+ T ++ P +P+ + FP+ P+ PP+P+
Sbjct: 1007 GAPTPPAVT-------PPSPKGSPAATPFPKGASTPPAATPPSPK 1044
Score = 39.7 bits (91), Expect = 0.008
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 23/102 (22%)
Query: 31 PATPAPEPSRAPASLLPPAPEHSP--------PSSPLTQPPE---GPKFPRVKNWEVGSI 79
PA+P+P+ + P + PP+P+ P P+ P PP GP P K G+
Sbjct: 931 PASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPK----GAP 986
Query: 80 TYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAPE 121
T + + + GP TP P+ P+ PP+P+
Sbjct: 987 TPPAATPPSPKGGPATPS--------PKGAPTPPAVTPPSPK 1020
Score = 37.4 bits (85), Expect = 0.042
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Query: 28 KQGPATPAPEPSRAPASLLPPAPEHSPPSSPLTQPPEG-PKFPRVKNWEVGSITYDTLSA 86
K GPAT P+ + P + PP+P+ SP T PP+G P P V +
Sbjct: 1298 KGGPATSPPKGAPTPPAATPPSPK----GSPGTPPPKGAPTPPAVTPPSPKGTPTLPATT 1353
Query: 87 QAQQDGPCTPRRCLGSL--VFPRKLQGRPSPGPPAPEQ 122
+ + GP TP G +G P+ PP+P++
Sbjct: 1354 PSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKR 1391
Score = 36.6 bits (83), Expect = 0.072
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 17/102 (16%)
Query: 28 KQGPATPAPEPSRAPASLLPPAPE--------HSPPSSPLTQPPEGPKFPRVKNWEVGSI 79
K GPATP+P+ + P + PP+P+ P++P PP PK G+
Sbjct: 1091 KGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPP-SPKGGLATPPPKGAP 1149
Query: 80 TYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAPE 121
T + + + G TP P+ P+ PP+P+
Sbjct: 1150 TTPAATPPSPKGGLATPP--------PKGAPTTPAATPPSPK 1183
Score = 35.8 bits (81), Expect = 0.12
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 28 KQGPATPAPEPSRAPASLLPPAPEHSPPSSPLTQPPEG-PKFPRVKNWEVGSITYDTLSA 86
K+GPATPAP+ +APA + + SP + T P+G P P K G+ T +
Sbjct: 897 KEGPATPAPK--QAPALSMTSS---SPKKARATPAPKGIPASPSPK----GAPTPPAATP 947
Query: 87 QAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAPE 121
+ + GP TP P+ P+ PP+P+
Sbjct: 948 PSPKGGPATPS--------PKWAPTPPAATPPSPK 974
Score = 35.4 bits (80), Expect = 0.16
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 20/115 (17%)
Query: 28 KQGPATPAPEPSRAPASLLPPAPEHSP----------PSSPLTQPPEGPKFPRVKNWEVG 77
K GPA P P R PA P SP P++P+T+ EG P +
Sbjct: 1379 KGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTR--EGAATPSKGDLTPP 1436
Query: 78 SITYDTL----SAQAQQDGPCTPRRCLGSLVFPRKLQGRPSP-GPPAPEQLLSQA 127
++T +L + A + GP TP G P PSP PPAP+Q+ + +
Sbjct: 1437 AVTPVSLKKAPATSAPKGGPATP-SSKGDPTLPAVTP--PSPKEPPAPKQVATSS 1488
Score = 35.0 bits (79), Expect = 0.21
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Query: 28 KQGPATPAPEPSRAPASLLPPAPEHSPPSSPLTQPPEGPKFPRVKNWEVGSITYDTLSAQ 87
K GPATP+ + ++ PP+P+ PP+ PK +G+ T +
Sbjct: 1453 KGGPATPSSKGDPTLPAVTPPSPK-EPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPS 1511
Query: 88 AQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAPEQLL 124
+ ++ P TP + L + +P AP++ L
Sbjct: 1512 SPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEAL 1548
Score = 34.7 bits (78), Expect = 0.27
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 17/102 (16%)
Query: 28 KQGPATPAPEPSRAPASLLPPAPEHSP--------PSSPLTQPPEGPKFPRVKNWEVGSI 79
K GPATP+ + + P + PP+P+ P P P PP PK G+
Sbjct: 1068 KGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPP-SPKGGLATPPHKGAP 1126
Query: 80 TYDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAPE 121
T + + + G TP P+ P+ PP+P+
Sbjct: 1127 TTPAATPPSPKGGLATPP--------PKGAPTTPAATPPSPK 1160
Score = 32.7 bits (73), Expect = 1.0
Identities = 25/94 (26%), Positives = 37/94 (39%), Gaps = 10/94 (10%)
Query: 28 KQGPATPAPEPSRAPASLLPPAPEHSPPSSPLTQPPEGPKFPRVKNWEVGSITYDTLSAQ 87
K P TPA P L P+P+ P++P PP PK G+ T +
Sbjct: 1169 KGAPTTPAATPPSPKGGLATPSPK-GAPTTPAATPP-SPKGGLATPSPKGAPTTPAATPP 1226
Query: 88 AQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPAPE 121
+ + G TP P+ P+ PP+P+
Sbjct: 1227 SPKGGLATPS--------PKGAPTTPAATPPSPK 1252
Score = 32.3 bits (72), Expect = 1.4
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 7/99 (7%)
Query: 28 KQGPATPAPEPSRAPASLLPPAPEHSPPSSP----LTQP---PEGPKFPRVKNWEVGSIT 80
K G ATP + + PA + PP+P+ P +SP T P P PK G+ T
Sbjct: 1275 KGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPT 1334
Query: 81 YDTLSAQAQQDGPCTPRRCLGSLVFPRKLQGRPSPGPPA 119
++ + + P P S P + P PPA
Sbjct: 1335 PPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPA 1373
Score = 32.3 bits (72), Expect = 1.4
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 25 LCGKQGPATPAPEPSRAPASLLPPAPEHSPPSSPLTQPPEGPKFPRVKNWEVGSITYDTL 84
L K+ PAT AP+ + P ++ P+P+ +P + P E P P K E S T
Sbjct: 1533 LLSKKTPATLAPKEALIPPAMTVPSPKKTP---AIPTPKEAPATPSSK--EASSPPAVTP 1587
Query: 85 SAQAQQDGPCTPRRCL----GSLVFPRKLQGRPSPGPPAPEQ 122
S G +P+ L + P++ P+ PP+PE+
Sbjct: 1588 ST---YKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEK 1626
Score = 32.3 bits (72), Expect = 1.4
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 21/99 (21%)
Query: 31 PATPAPEPSRAPA--SLLPPAPEHSPPSSPLTQPPEGPKFPRVKNWEVGSITYDTLSAQA 88
PA +P P AP ++ PP+PE +GP P K G+ T ++ +
Sbjct: 1603 PAVTSPSPKEAPTPPAVTPPSPE------------KGPATPAPK----GTPTSPPVTPSS 1646
Query: 89 QQDGPCTPR--RCLGSLVFPRKLQGRPS-PGPPAPEQLL 124
+D P +P C P+ +G P+ GP A +++L
Sbjct: 1647 LKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVL 1685
Score = 31.2 bits (69), Expect = 3.0
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 30/97 (30%)
Query: 28 KQGPATPAPEPSRAPASLLPPAPEHSPPSSPLTQPPEGPKFPRVKNWEVGSITYDTLSAQ 87
K G ATP+P+ + + PP SP P T PP+G P
Sbjct: 1229 KGGLATPSPKGAPTTPAATPP----SPKGGPATPPPKGAPTPPA---------------- 1268
Query: 88 AQQDGPCTPRRCLGSLVFPRKLQGRPSPG---PPAPE 121
TP G L P +G P+P PP+P+
Sbjct: 1269 ------ATPPSLKGGLATPPH-KGAPNPAVVTPPSPK 1298
Score = 30.4 bits (67), Expect = 5.1
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 28 KQGPATPA---PEPSRAPASLLPPAPEHSPPSSPLTQP--PEGPKFPRVKNWEVGSITYD 82
K+ P PA P P + PA+ PAP+ +P S P+T + P P ++G+
Sbjct: 1611 KEAPTPPAVTPPSPEKGPAT---PAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQ 1667
Query: 83 TLSAQAQQDGPCTPRRCL 100
+ GP + L
Sbjct: 1668 ASKGLPAKKGPTALKEVL 1685
>gi|219881538 hypothetical protein LOC199870 isoform 2 [Homo
sapiens]
Length = 312
Score = 45.4 bits (106), Expect = 2e-04
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 591 RLECSSTITAHCSLNLLDSSNPPTSTSQVVGTTG 624
RLEC+ TI+AHC+L+L SS+ P S+S+V G TG
Sbjct: 49 RLECNGTISAHCNLHLPGSSDSPASSSRVAGITG 82
>gi|219881536 hypothetical protein LOC199870 isoform 1 [Homo
sapiens]
Length = 341
Score = 45.4 bits (106), Expect = 2e-04
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 591 RLECSSTITAHCSLNLLDSSNPPTSTSQVVGTTG 624
RLEC+ TI+AHC+L+L SS+ P S+S+V G TG
Sbjct: 49 RLECNGTISAHCNLHLPGSSDSPASSSRVAGITG 82
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 44.7 bits (104), Expect = 3e-04
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 24/114 (21%)
Query: 27 GKQGPATPAP--EPSRAPASLL--------PPA----PEHSPPSSPLTQPPEGPKFPRVK 72
G P + AP +PS+AP SL+ PPA P+ P + T P P FP
Sbjct: 1098 GSPAPTSSAPLAQPSQAPPSLVYTVATSTTPPAATILPKGPPAPATATPAPTSP-FPSAT 1156
Query: 73 NWEVGSITYDTLSAQAQQDGPCTPRRCLGSLV------FPRKLQGRPSPGPPAP 120
GS+TY ++ +AQ+ P P++ ++ F GRP P P P
Sbjct: 1157 ---AGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGSFEAGASGRPGPAPRQP 1207
Score = 30.8 bits (68), Expect = 3.9
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 13/90 (14%)
Query: 32 ATPAPEPSRAPASL-LPPAPEHSPPSSPLTQPPEGPKFPRVKNWEVGSITYDTLSAQAQQ 90
ATP +P A A L +PP + +P P GP + S + D+ +AQA
Sbjct: 1522 ATPTEQPPGAEAPLPVPPPTGTAAAPAPTPSPAGGP--------DPTSPSSDSGTAQAAP 1573
Query: 91 DGPCTPRRCLGSLVFPRKLQGRPSPGPPAP 120
P P G + +G P P PP P
Sbjct: 1574 PLPPPPESGPGQPGW----EGAPQPSPPPP 1599
>gi|170932471 hypothetical protein LOC79703 [Homo sapiens]
Length = 677
Score = 44.7 bits (104), Expect = 3e-04
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 586 LTLWPRLECSSTITAHCSLNLLDSSNPPTSTSQVVGTTGACHDA 629
LTL PR ECS ++AHC+L+L SS+ S +V G T A H A
Sbjct: 109 LTLLPRPECSGAVSAHCNLHLPGSSDSHASVPRVAGITDAHHHA 152
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,719,440
Number of Sequences: 37866
Number of extensions: 1550257
Number of successful extensions: 14300
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 476
Number of HSP's that attempted gapping in prelim test: 10757
Number of HSP's gapped (non-prelim): 3375
length of query: 629
length of database: 18,247,518
effective HSP length: 108
effective length of query: 521
effective length of database: 14,157,990
effective search space: 7376312790
effective search space used: 7376312790
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.