Search of human proteins with 228008407

Search of human proteins with 228008407

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|228008407 serine active site containing 1 [Homo sapiens]
         (654 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|228008407 serine active site containing 1 [Homo sapiens]          1315   0.0  
gi|76563908 hypothetical protein LOC169436 [Homo sapiens]              39   0.015
gi|55742693 zyg-11 homolog B [Homo sapiens]                            37   0.044
gi|31657114 armadillo repeat containing 4 [Homo sapiens]               33   1.1  
gi|155030202 RAP1, GTP-GDP dissociation stimulator 1 isoform 6 [...    32   1.4  
gi|224922791 amidohydrolase domain containing 2 isoform 2 [Homo ...    32   1.4  
gi|40556361 WD repeat domain 93 [Homo sapiens]                         31   3.1  
gi|58761490 hypothetical protein LOC89853 isoform 2 [Homo sapiens]     31   4.1  
gi|58761488 hypothetical protein LOC89853 isoform 1 [Homo sapiens]     31   4.1  
gi|155030200 RAP1, GTP-GDP dissociation stimulator 1 isoform 5 [...    31   4.1  
gi|155030198 RAP1, GTP-GDP dissociation stimulator 1 isoform 4 [...    31   4.1  
gi|155030196 RAP1, GTP-GDP dissociation stimulator 1 isoform 3 [...    31   4.1  
gi|155030194 RAP1, GTP-GDP dissociation stimulator 1 isoform 2 [...    31   4.1  
gi|155030192 RAP1, GTP-GDP dissociation stimulator 1 isoform 1 [...    31   4.1  
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]    31   4.1  
gi|45827729 scribble isoform b [Homo sapiens]                          30   5.4  
gi|45827731 scribble isoform a [Homo sapiens]                          30   5.4  
gi|109809739 La ribonucleoprotein domain family, member 7 [Homo ...    30   5.4  
gi|109809741 La ribonucleoprotein domain family, member 7 [Homo ...    30   5.4  
gi|242117946 hypothetical protein LOC57579 isoform c [Homo sapiens]    30   9.2  
gi|157671939 hypothetical protein LOC57579 isoform b [Homo sapiens]    30   9.2  
gi|157671937 hypothetical protein LOC57579 isoform a [Homo sapiens]    30   9.2  

>gi|228008407 serine active site containing 1 [Homo sapiens]
          Length = 654

 Score = 1315 bits (3402), Expect = 0.0
 Identities = 654/654 (100%), Positives = 654/654 (100%)

Query: 1   MSLAAYCVICCRRIGTSTSPPKSGTHWRDIRNIIKFTGSLILGGSLFLTYEVLALKKAVT 60
           MSLAAYCVICCRRIGTSTSPPKSGTHWRDIRNIIKFTGSLILGGSLFLTYEVLALKKAVT
Sbjct: 1   MSLAAYCVICCRRIGTSTSPPKSGTHWRDIRNIIKFTGSLILGGSLFLTYEVLALKKAVT 60

Query: 61  LDTQVVEREKMKSYIYVHTVSLDKGENHGIAWQARKELHKAVRKVLATSAKILRNPFADP 120
           LDTQVVEREKMKSYIYVHTVSLDKGENHGIAWQARKELHKAVRKVLATSAKILRNPFADP
Sbjct: 61  LDTQVVEREKMKSYIYVHTVSLDKGENHGIAWQARKELHKAVRKVLATSAKILRNPFADP 120

Query: 121 FSTVDIEDHECAVWLLLRKSKSDDKTTRLEAVREMSETHHWHDYQYRIIAQACDPKTLIG 180
           FSTVDIEDHECAVWLLLRKSKSDDKTTRLEAVREMSETHHWHDYQYRIIAQACDPKTLIG
Sbjct: 121 FSTVDIEDHECAVWLLLRKSKSDDKTTRLEAVREMSETHHWHDYQYRIIAQACDPKTLIG 180

Query: 181 LARSEESDLRFFLLPPPLPSLKEDSSTEEELRQLLASLPQTELDECIQYFTSLALSESSQ 240
           LARSEESDLRFFLLPPPLPSLKEDSSTEEELRQLLASLPQTELDECIQYFTSLALSESSQ
Sbjct: 181 LARSEESDLRFFLLPPPLPSLKEDSSTEEELRQLLASLPQTELDECIQYFTSLALSESSQ 240

Query: 241 SLAAQKGGLWCFGGNGLPYAESFGEVPSATVEMFCLEAIVKHSEISTHCDKIEANGGLQL 300
           SLAAQKGGLWCFGGNGLPYAESFGEVPSATVEMFCLEAIVKHSEISTHCDKIEANGGLQL
Sbjct: 241 SLAAQKGGLWCFGGNGLPYAESFGEVPSATVEMFCLEAIVKHSEISTHCDKIEANGGLQL 300

Query: 301 LQRLYRLHKDCPKVQRNIMRVIGNMALNEHLHSSIVRSGWVSIMAEAMKSPHIMESSHAA 360
           LQRLYRLHKDCPKVQRNIMRVIGNMALNEHLHSSIVRSGWVSIMAEAMKSPHIMESSHAA
Sbjct: 301 LQRLYRLHKDCPKVQRNIMRVIGNMALNEHLHSSIVRSGWVSIMAEAMKSPHIMESSHAA 360

Query: 361 RILANLDRETVQEKYQDGVYVLHPQYRTSQPIKADVLFIHGLMGAAFKTWRQQDSEQAVI 420
           RILANLDRETVQEKYQDGVYVLHPQYRTSQPIKADVLFIHGLMGAAFKTWRQQDSEQAVI
Sbjct: 361 RILANLDRETVQEKYQDGVYVLHPQYRTSQPIKADVLFIHGLMGAAFKTWRQQDSEQAVI 420

Query: 421 EKPMEDEDRYTTCWPKTWLAKDCPALRIISVEYDTSLSDWRARCPMERKSIAFRSNELLR 480
           EKPMEDEDRYTTCWPKTWLAKDCPALRIISVEYDTSLSDWRARCPMERKSIAFRSNELLR
Sbjct: 421 EKPMEDEDRYTTCWPKTWLAKDCPALRIISVEYDTSLSDWRARCPMERKSIAFRSNELLR 480

Query: 481 KLRAAGVGDRPVVWISHSMGGLLVKKMLLEASTKPEMSTVINNTRGIIFYSVPHHGSRLA 540
           KLRAAGVGDRPVVWISHSMGGLLVKKMLLEASTKPEMSTVINNTRGIIFYSVPHHGSRLA
Sbjct: 481 KLRAAGVGDRPVVWISHSMGGLLVKKMLLEASTKPEMSTVINNTRGIIFYSVPHHGSRLA 540

Query: 541 EYSVNIRYLLFPSLEVKELSKDSPALKTLQDDFLEFAKDKNFQVLNFVETLPTYIGSMIK 600
           EYSVNIRYLLFPSLEVKELSKDSPALKTLQDDFLEFAKDKNFQVLNFVETLPTYIGSMIK
Sbjct: 541 EYSVNIRYLLFPSLEVKELSKDSPALKTLQDDFLEFAKDKNFQVLNFVETLPTYIGSMIK 600

Query: 601 LHVVPVESADLGIGDLIPVDVNHLNICKPKKKDAFLYQRTLQFIREALAKDLEN 654
           LHVVPVESADLGIGDLIPVDVNHLNICKPKKKDAFLYQRTLQFIREALAKDLEN
Sbjct: 601 LHVVPVESADLGIGDLIPVDVNHLNICKPKKKDAFLYQRTLQFIREALAKDLEN 654


>gi|76563908 hypothetical protein LOC169436 [Homo sapiens]
          Length = 680

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 276 LEAIVKHSEISTHCDKIEANGG--LQLLQRLYRLHKDCPKVQRNIMRVIGNMALNEHLHS 333
           L ++VK SE++     ++  GG  L L++  Y+LH+D P+V  N+  ++ ++A  E +  
Sbjct: 570 LASLVKVSELAAFKVVVQEEGGSGLSLIKETYQLHRDDPEVVENVGMLLVHLASYEEILP 629

Query: 334 SIVRSGWVSIMAE 346
            +V S   +++ E
Sbjct: 630 ELVSSSMKALLQE 642


>gi|55742693 zyg-11 homolog B [Homo sapiens]
          Length = 744

 Score = 37.4 bits (85), Expect = 0.044
 Identities = 21/83 (25%), Positives = 41/83 (49%)

Query: 284 EISTHCDKIEANGGLQLLQRLYRLHKDCPKVQRNIMRVIGNMALNEHLHSSIVRSGWVSI 343
           E  T C     N GL+L  R+         +Q+ ++ ++ N+A  + LHS ++   ++  
Sbjct: 527 ESPTTCRHFIENQGLELFMRVLESFPTESSIQQKVLGLLNNIAEVQELHSELMWKDFIDH 586

Query: 344 MAEAMKSPHIMESSHAARILANL 366
           ++  + S  +  S  AA I+A+L
Sbjct: 587 ISSLLHSVEVEVSYFAAGIIAHL 609


>gi|31657114 armadillo repeat containing 4 [Homo sapiens]
          Length = 1044

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)

Query: 296 GGLQLLQRLYRLHKDCPKVQRNIMRVIGNMALNEHLHSSIVRSGWVSIMAEAMKSPHIME 355
           GGL++L  L  L  D  K +   ++++  ++ N  +  +IV  G + IM   + SPH   
Sbjct: 494 GGLEVLINL--LETDEVKCKIGSLKILKEISHNPQIRQNIVDLGGLPIMVNILDSPHKSL 551

Query: 356 SSHAARILANL 366
              AA  +AN+
Sbjct: 552 KCLAAETIANV 562


>gi|155030202 RAP1, GTP-GDP dissociation stimulator 1 isoform 6
           [Homo sapiens]
          Length = 516

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 290 DKIEANGGLQLLQRLYRLHKDCPKVQRNIMRVIGNMALNEHLHSSIVRSGWVSIMAEAMK 349
           +KI+A+G LQL   L      C   +  +  +I  +A NE +    V +G +S + + + 
Sbjct: 44  EKIQASGILQLFASLLTPQSSC---KAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLN 100

Query: 350 SPHIMESSHAARILANLDRETVQEKYQ 376
           S          R L N+  ++   K Q
Sbjct: 101 SKDQEVLLQTGRALGNICYDSQSSKEQ 127


>gi|224922791 amidohydrolase domain containing 2 isoform 2 [Homo
           sapiens]
          Length = 594

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 11/81 (13%)

Query: 433 CWPKTWLAKDCPALRIISVEYDTSLSDWRARCPMERKSIAFRSNELLR---------KLR 483
           CW   W A  CPA   ISV   +S+S W    PM  ++ A R  E LR          LR
Sbjct: 440 CWRAVWEAPVCPA-HPISVILPSSVSPWPWHTPM-WQTRAVRLPEQLRGGWASGALLALR 497

Query: 484 AAGVGDRPVVWISHSMGGLLV 504
            A VG     W S + G +++
Sbjct: 498 TATVGSDVRDWCSPTSGVIVL 518


>gi|40556361 WD repeat domain 93 [Homo sapiens]
          Length = 686

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 6/116 (5%)

Query: 510 EASTKPEMSTVINNTRGIIF---YSVPHHGSRLAEY-SVNIRYLLFPSLEVKELSKDSPA 565
           E  + P+   +IN    ++F   + +    + L E  S  I+  ++P L   +L+K  P 
Sbjct: 49  ELDSLPQPYRMINKLVNLLFDQSWEIIEERNALREAESSQIQPTVYPPLGEIQLNK-MPN 107

Query: 566 LKTLQDDFLEFAKDKNFQVLNFVETLPTYIGSMIKLHVVPVESADLGIGDLI-PVD 620
              +  D++     K F + N       Y    +K+ V  + + DLG   LI PVD
Sbjct: 108 CMAVSQDYVFIGGAKGFSIYNLYSAKQIYAWEKLKVDVTSIWATDLGNEILIAPVD 163


>gi|58761490 hypothetical protein LOC89853 isoform 2 [Homo sapiens]
          Length = 221

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 195 PPPLPSLKEDSSTEEELRQLLASLPQTELD 224
           PPP P    D ST  E++ L  +LP+T +D
Sbjct: 19  PPPPPQRGTDQSTMPEVKDLSEALPETSMD 48


>gi|58761488 hypothetical protein LOC89853 isoform 1 [Homo sapiens]
          Length = 319

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 195 PPPLPSLKEDSSTEEELRQLLASLPQTELD 224
           PPP P    D ST  E++ L  +LP+T +D
Sbjct: 19  PPPPPQRGTDQSTMPEVKDLSEALPETSMD 48


>gi|155030200 RAP1, GTP-GDP dissociation stimulator 1 isoform 5
           [Homo sapiens]
          Length = 558

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 3/77 (3%)

Query: 290 DKIEANGGLQLLQRLYRLHKDCPKVQRNIMRVIGNMALNEHLHSSIVRSGWVSIMAEAMK 349
           +KI+A+G LQL   L      C   +  +  +I  +A NE +    V +G +S + + + 
Sbjct: 43  EKIQASGILQLFASLLTPQSSC---KAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLN 99

Query: 350 SPHIMESSHAARILANL 366
           S          R L N+
Sbjct: 100 SKDQEVLLQTGRALGNI 116


>gi|155030198 RAP1, GTP-GDP dissociation stimulator 1 isoform 4
           [Homo sapiens]
          Length = 559

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 3/77 (3%)

Query: 290 DKIEANGGLQLLQRLYRLHKDCPKVQRNIMRVIGNMALNEHLHSSIVRSGWVSIMAEAMK 349
           +KI+A+G LQL   L      C   +  +  +I  +A NE +    V +G +S + + + 
Sbjct: 44  EKIQASGILQLFASLLTPQSSC---KAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLN 100

Query: 350 SPHIMESSHAARILANL 366
           S          R L N+
Sbjct: 101 SKDQEVLLQTGRALGNI 117


>gi|155030196 RAP1, GTP-GDP dissociation stimulator 1 isoform 3
           [Homo sapiens]
          Length = 607

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 3/77 (3%)

Query: 290 DKIEANGGLQLLQRLYRLHKDCPKVQRNIMRVIGNMALNEHLHSSIVRSGWVSIMAEAMK 349
           +KI+A+G LQL   L      C   +  +  +I  +A NE +    V +G +S + + + 
Sbjct: 43  EKIQASGILQLFASLLTPQSSC---KAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLN 99

Query: 350 SPHIMESSHAARILANL 366
           S          R L N+
Sbjct: 100 SKDQEVLLQTGRALGNI 116


>gi|155030194 RAP1, GTP-GDP dissociation stimulator 1 isoform 2
           [Homo sapiens]
          Length = 607

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 3/77 (3%)

Query: 290 DKIEANGGLQLLQRLYRLHKDCPKVQRNIMRVIGNMALNEHLHSSIVRSGWVSIMAEAMK 349
           +KI+A+G LQL   L      C   +  +  +I  +A NE +    V +G +S + + + 
Sbjct: 44  EKIQASGILQLFASLLTPQSSC---KAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLN 100

Query: 350 SPHIMESSHAARILANL 366
           S          R L N+
Sbjct: 101 SKDQEVLLQTGRALGNI 117


>gi|155030192 RAP1, GTP-GDP dissociation stimulator 1 isoform 1
           [Homo sapiens]
          Length = 608

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 3/77 (3%)

Query: 290 DKIEANGGLQLLQRLYRLHKDCPKVQRNIMRVIGNMALNEHLHSSIVRSGWVSIMAEAMK 349
           +KI+A+G LQL   L      C   +  +  +I  +A NE +    V +G +S + + + 
Sbjct: 44  EKIQASGILQLFASLLTPQSSC---KAKVANIIAEVAKNEFMRIPCVDAGLISPLVQLLN 100

Query: 350 SPHIMESSHAARILANL 366
           S          R L N+
Sbjct: 101 SKDQEVLLQTGRALGNI 117


>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
          Length = 753

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 11/115 (9%)

Query: 138 RKSKSD-DKTTRLEAVREMSETHHWHDYQYRIIAQACD-PKTLIGLARSEESDLRFFLLP 195
           RK K D DK  R+E ++   E H +H      I +  D    L+   R  + D+ +++  
Sbjct: 154 RKKKGDKDKQDRIEGLKRHIEKHRYHVRMLETILRMLDNDSILVDAIRKIKDDVEYYVDS 213

Query: 196 PPLPSLKE------DSSTEEELRQLLASLPQTEL---DECIQYFTSLALSESSQS 241
              P  +E      D   E+  + L+A+ P +     DE     +S   S +S S
Sbjct: 214 SQDPDFEENEFLYDDLDLEDIPQALVATSPPSHSHMEDEIFNQSSSTPTSTTSSS 268


>gi|45827729 scribble isoform b [Homo sapiens]
          Length = 1630

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 182 ARSEESDLRFFLLPPPLPSLKEDSSTEEELRQLLASLPQTELDECIQYFTSLALSESSQS 241
           AR+ E  L  +LLP   P   ED+  +  L +  +  P + +   IQ+  +    E ++ 
Sbjct: 404 ARTGEKVLTCYLLPQQPPLSLEDAGQQGSLSETWSDAPPSRV-SVIQFLEAPIGDEDAEE 462

Query: 242 LAAQKGGL 249
            AA+K GL
Sbjct: 463 AAAEKRGL 470


>gi|45827731 scribble isoform a [Homo sapiens]
          Length = 1655

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 182 ARSEESDLRFFLLPPPLPSLKEDSSTEEELRQLLASLPQTELDECIQYFTSLALSESSQS 241
           AR+ E  L  +LLP   P   ED+  +  L +  +  P + +   IQ+  +    E ++ 
Sbjct: 404 ARTGEKVLTCYLLPQQPPLSLEDAGQQGSLSETWSDAPPSRV-SVIQFLEAPIGDEDAEE 462

Query: 242 LAAQKGGL 249
            AA+K GL
Sbjct: 463 AAAEKRGL 470


>gi|109809739 La ribonucleoprotein domain family, member 7 [Homo
           sapiens]
          Length = 582

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 7/81 (8%)

Query: 369 ETVQEKYQDGVYVLHPQYRTSQPIKADVLFIHGLMGAAFKTWRQQDSEQAVIEKPMEDED 428
           E V  K  + VY+  P Y+++   K       G     F+T  Q       +  P E+  
Sbjct: 142 ERVFGKCGNVVYISIPHYKSTGDPK-------GFAFVEFETKEQAAKAIEFLNNPPEEAP 194

Query: 429 RYTTCWPKTWLAKDCPALRII 449
           R    +PKT   K  PALR++
Sbjct: 195 RKPGIFPKTVKNKPIPALRVV 215


>gi|109809741 La ribonucleoprotein domain family, member 7 [Homo
           sapiens]
          Length = 582

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 7/81 (8%)

Query: 369 ETVQEKYQDGVYVLHPQYRTSQPIKADVLFIHGLMGAAFKTWRQQDSEQAVIEKPMEDED 428
           E V  K  + VY+  P Y+++   K       G     F+T  Q       +  P E+  
Sbjct: 142 ERVFGKCGNVVYISIPHYKSTGDPK-------GFAFVEFETKEQAAKAIEFLNNPPEEAP 194

Query: 429 RYTTCWPKTWLAKDCPALRII 449
           R    +PKT   K  PALR++
Sbjct: 195 RKPGIFPKTVKNKPIPALRVV 215


>gi|242117946 hypothetical protein LOC57579 isoform c [Homo sapiens]
          Length = 1515

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 476  NELLRKLRAAGVGDRPVVWISHSMGGLLVKKMLLEASTKPEMSTVINNTRGIIFYSVPHH 535
            +E+++ ++   +    + +I HS+G L+++ +L    T+P     +N     +  S PH 
Sbjct: 1305 DEIIQYIQIYSLTVSKISFIGHSLGNLIIRSVL----TRPRFKYYLNKLHTFLSLSGPHL 1360

Query: 536  GS 537
            G+
Sbjct: 1361 GT 1362


>gi|157671939 hypothetical protein LOC57579 isoform b [Homo sapiens]
          Length = 1302

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 476  NELLRKLRAAGVGDRPVVWISHSMGGLLVKKMLLEASTKPEMSTVINNTRGIIFYSVPHH 535
            +E+++ ++   +    + +I HS+G L+++ +L    T+P     +N     +  S PH 
Sbjct: 1092 DEIIQYIQIYSLTVSKISFIGHSLGNLIIRSVL----TRPRFKYYLNKLHTFLSLSGPHL 1147

Query: 536  GS 537
            G+
Sbjct: 1148 GT 1149


>gi|157671937 hypothetical protein LOC57579 isoform a [Homo sapiens]
          Length = 1319

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 476  NELLRKLRAAGVGDRPVVWISHSMGGLLVKKMLLEASTKPEMSTVINNTRGIIFYSVPHH 535
            +E+++ ++   +    + +I HS+G L+++ +L    T+P     +N     +  S PH 
Sbjct: 1109 DEIIQYIQIYSLTVSKISFIGHSLGNLIIRSVL----TRPRFKYYLNKLHTFLSLSGPHL 1164

Query: 536  GS 537
            G+
Sbjct: 1165 GT 1166


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,822,090
Number of Sequences: 37866
Number of extensions: 1009928
Number of successful extensions: 2747
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2741
Number of HSP's gapped (non-prelim): 29
length of query: 654
length of database: 18,247,518
effective HSP length: 109
effective length of query: 545
effective length of database: 14,120,124
effective search space: 7695467580
effective search space used: 7695467580
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.