Guide to the Human Genome
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Name: GAPT Sequence: fasta or formatted (157aa) NCBI GI: 22749379
Description:

GRB2-binding adaptor protein, transmembrane

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8          6           2
 C cysteine            2.5          4           1
 D aspartate           4.5          7           1
 E glutamate           7.0         11           2
 F phenylalanine       3.2          5           1
 G glycine             7.0         11           1
 H histidine           3.8          6           1
 I isoleucine          5.7          9           2
 K lysine              6.4         10           1
 L leucine             7.6         12           5
 M methionine          0.6          1           1
 N asparagine          6.4         10           2
 P proline             5.1          8           2
 Q glutamine           3.2          5           1
 R arginine            7.0         11           2
 S serine              8.3         13           2
 T threonine           5.7          9           1
 V valine              6.4         10           2
 W tryptophan          1.3          2           1
 Y tyrosine            4.5          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GRB2-binding adaptor protein, transmembrane 
ZBTB38                0.020   zinc finger and BTB domain containing 38 
EGFR                  0.016   epidermal growth factor receptor isoform a precursor...
GORAB                 0.016   golgin, RAB6-interacting isoform a 
GORAB                 0.016   golgin, RAB6-interacting isoform b 
ASGR1                 0.016   asialoglycoprotein receptor 1 
NDUFV3                0.013   NADH-ubiquinone oxidoreductase flavoprotein 3 isofor...
TOP2B                 0.010   DNA topoisomerase II, beta isozyme 
HEPH                  0.010   hephaestin isoform b 
HEPH                  0.010   hephaestin isoform a 
HEPH                  0.010   hephaestin isoform c 
ANTXR2                0.010   anthrax toxin receptor 2 isoform 2 
ANTXR2                0.010   anthrax toxin receptor 2 isoform 1 
MRGPRG                0.010   PREDICTED: MAS-related GPR, member G 
MRGPRG                0.010   PREDICTED: MAS-related GPR, member G 
OR10H2                0.010   olfactory receptor, family 10, subfamily H, member 2 ...
RSPH4A                0.007   radial spoke head 4 homolog A isoform 2 
RSPH4A                0.007   radial spoke head 4 homolog A isoform 1 
ITGB7                 0.007   integrin, beta 7 
LRRCC1                0.007   sodium channel associated protein 2 isoform b [Homo...
LRRCC1                0.007   sodium channel associated protein 2 isoform a [Homo...
SLFN14                0.007   schlafen family member 14 
TANC1                 0.007   tetratricopeptide repeat, ankyrin repeat and coiled...
EPHA2                 0.007   ephrin receptor EphA2 
MRGPRG                0.007   PREDICTED: MAS-related GPR, member G 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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