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Search of human proteins with 22748979
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22748979 transmembrane protein 199 [Homo sapiens]
(208 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22748979 transmembrane protein 199 [Homo sapiens] 401 e-112
gi|171543850 RUN domain containing 1 [Homo sapiens] 29 2.5
gi|57863248 zinc finger, CCHC domain containing 11 isoform a [Ho... 29 3.2
gi|57863246 zinc finger, CCHC domain containing 11 isoform b [Ho... 29 3.2
gi|57863250 zinc finger, CCHC domain containing 11 isoform c [Ho... 29 3.2
gi|239754182 PREDICTED: hypothetical protein [Homo sapiens] 28 4.2
gi|239748704 PREDICTED: hypothetical protein XP_002346777 [Homo ... 28 4.2
gi|239742735 PREDICTED: hypothetical protein XP_002342625 [Homo ... 28 4.2
gi|130502140 NEZHA isoform 2 [Homo sapiens] 28 4.2
gi|122937255 NEZHA isoform 1 [Homo sapiens] 28 4.2
gi|156104874 envoplakin [Homo sapiens] 28 4.2
gi|33359682 ephrin A1 isoform a precursor [Homo sapiens] 28 4.2
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 28 5.5
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 28 5.5
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 28 5.5
gi|38202246 syntaphilin [Homo sapiens] 28 5.5
gi|45446749 kinesin family member 5A [Homo sapiens] 28 7.2
gi|7705939 Rap guanine nucleotide exchange factor (GEF)-like 1 [... 28 7.2
gi|14670354 general transcription factor II, i isoform 3 [Homo s... 27 9.4
gi|14670352 general transcription factor II, i isoform 2 [Homo s... 27 9.4
gi|14670350 general transcription factor II, i isoform 1 [Homo s... 27 9.4
gi|169881252 general transcription factor II, i isoform 4 [Homo ... 27 9.4
gi|9845285 cytochrome P450, family 26, subfamily b, polypeptide ... 27 9.4
gi|46559747 hypothetical protein LOC399947 [Homo sapiens] 27 9.4
>gi|22748979 transmembrane protein 199 [Homo sapiens]
Length = 208
Score = 401 bits (1031), Expect = e-112
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MASSLLAGERLVRALGPGGELEPERLPRKLRAELEAALGKKHKGGDSSSGPQRLVSFRLI 60
MASSLLAGERLVRALGPGGELEPERLPRKLRAELEAALGKKHKGGDSSSGPQRLVSFRLI
Sbjct: 1 MASSLLAGERLVRALGPGGELEPERLPRKLRAELEAALGKKHKGGDSSSGPQRLVSFRLI 60
Query: 61 RDLHQHLRERDSKLYLHELLEGSEIYLPEVVKPPRNPELVARLEKIKIQLANEEYKRITR 120
RDLHQHLRERDSKLYLHELLEGSEIYLPEVVKPPRNPELVARLEKIKIQLANEEYKRITR
Sbjct: 61 RDLHQHLRERDSKLYLHELLEGSEIYLPEVVKPPRNPELVARLEKIKIQLANEEYKRITR 120
Query: 121 NVTCQDTRHGGTLSDLGKQVRSLKALVITIFNFIVTVVAAFVCTYLGSQYIFTEMASRVL 180
NVTCQDTRHGGTLSDLGKQVRSLKALVITIFNFIVTVVAAFVCTYLGSQYIFTEMASRVL
Sbjct: 121 NVTCQDTRHGGTLSDLGKQVRSLKALVITIFNFIVTVVAAFVCTYLGSQYIFTEMASRVL 180
Query: 181 AALIVASVVGLAELYVMVRAMEGELGEL 208
AALIVASVVGLAELYVMVRAMEGELGEL
Sbjct: 181 AALIVASVVGLAELYVMVRAMEGELGEL 208
>gi|171543850 RUN domain containing 1 [Homo sapiens]
Length = 613
Score = 29.3 bits (64), Expect = 2.5
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 52 QRLVSFRLIRDLHQHLRERDSKLYLHELLEGSEIYLPEVVKPPRNPELVARLEKIKIQLA 111
QR++ LI+ L +L E S L EL + + + ++V P R E + +E++K Q+
Sbjct: 218 QRVIIDELIKKLDMNLNEDISSLSTEELRQRVDAAVAQIVNPARVKEQL--VEQLKTQIR 275
Query: 112 NEE 114
+ E
Sbjct: 276 DLE 278
>gi|57863248 zinc finger, CCHC domain containing 11 isoform a [Homo
sapiens]
Length = 1645
Score = 28.9 bits (63), Expect = 3.2
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 54 LVSFRLIRDLHQHLRERDSKLYLHELLEGSEIYLPEVVKPPRNPELVARLEKIKIQLANE 113
L+ I+ H+H++E+ K + E E SE+ PP +P +A L I+LA E
Sbjct: 310 LIHIENIQGAHKHIKEKRHKKNILEKQEESELR----SLPPPSPAHLAALSVAVIELAKE 365
>gi|57863246 zinc finger, CCHC domain containing 11 isoform b [Homo
sapiens]
Length = 1644
Score = 28.9 bits (63), Expect = 3.2
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 54 LVSFRLIRDLHQHLRERDSKLYLHELLEGSEIYLPEVVKPPRNPELVARLEKIKIQLANE 113
L+ I+ H+H++E+ K + E E SE+ PP +P +A L I+LA E
Sbjct: 310 LIHIENIQGAHKHIKEKRHKKNILEKQEESELR----SLPPPSPAHLAALSVAVIELAKE 365
>gi|57863250 zinc finger, CCHC domain containing 11 isoform c [Homo
sapiens]
Length = 1640
Score = 28.9 bits (63), Expect = 3.2
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 54 LVSFRLIRDLHQHLRERDSKLYLHELLEGSEIYLPEVVKPPRNPELVARLEKIKIQLANE 113
L+ I+ H+H++E+ K + E E SE+ PP +P +A L I+LA E
Sbjct: 310 LIHIENIQGAHKHIKEKRHKKNILEKQEESELR----SLPPPSPAHLAALSVAVIELAKE 365
>gi|239754182 PREDICTED: hypothetical protein [Homo sapiens]
Length = 136
Score = 28.5 bits (62), Expect = 4.2
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Query: 37 ALGKKHKGGDSSSGPQRLVSFRLIRDLHQHLRERDSKLYLHELLEG 82
A G +GG S G + L+RD Q L +R LH+LLEG
Sbjct: 40 AAGVPTRGGIGSEGQAEVEGLYLLRDGQQDLVQR-----LHQLLEG 80
>gi|239748704 PREDICTED: hypothetical protein XP_002346777 [Homo
sapiens]
Length = 136
Score = 28.5 bits (62), Expect = 4.2
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Query: 37 ALGKKHKGGDSSSGPQRLVSFRLIRDLHQHLRERDSKLYLHELLEG 82
A G +GG S G + L+RD Q L +R LH+LLEG
Sbjct: 40 AAGVPTRGGIGSEGQAEVEGLYLLRDGQQDLVQR-----LHQLLEG 80
>gi|239742735 PREDICTED: hypothetical protein XP_002342625 [Homo
sapiens]
Length = 136
Score = 28.5 bits (62), Expect = 4.2
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Query: 37 ALGKKHKGGDSSSGPQRLVSFRLIRDLHQHLRERDSKLYLHELLEG 82
A G +GG S G + L+RD Q L +R LH+LLEG
Sbjct: 40 AAGVPTRGGIGSEGQAEVEGLYLLRDGQQDLVQR-----LHQLLEG 80
>gi|130502140 NEZHA isoform 2 [Homo sapiens]
Length = 1249
Score = 28.5 bits (62), Expect = 4.2
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 15/113 (13%)
Query: 13 RALGPGGELEPERLPRKLRAELEAALGKKHKGGDSSSGPQRLVSFRLIRDLHQHLRERDS 72
RA P G + P RLP + E G ++S P + + R L++ + +
Sbjct: 1071 RAPSPSGLMSPSRLPGSRERDWE--------NGSNASSPASVPEYTGPR-LYKEPSAKSN 1121
Query: 73 KLYLHELLEGSEIYLPEVVKPPRNPELVARLEKIKIQLANEEYKRITRNVTCQ 125
K +H L S L V P+ ++ +EK K + + R+ +CQ
Sbjct: 1122 KFIIHNAL--SHCCLAGKVNEPQKNRILEEIEKSKA----NHFLILFRDSSCQ 1168
>gi|122937255 NEZHA isoform 1 [Homo sapiens]
Length = 1276
Score = 28.5 bits (62), Expect = 4.2
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 15/113 (13%)
Query: 13 RALGPGGELEPERLPRKLRAELEAALGKKHKGGDSSSGPQRLVSFRLIRDLHQHLRERDS 72
RA P G + P RLP + E G ++S P + + R L++ + +
Sbjct: 1098 RAPSPSGLMSPSRLPGSRERDWE--------NGSNASSPASVPEYTGPR-LYKEPSAKSN 1148
Query: 73 KLYLHELLEGSEIYLPEVVKPPRNPELVARLEKIKIQLANEEYKRITRNVTCQ 125
K +H L S L V P+ ++ +EK K + + R+ +CQ
Sbjct: 1149 KFIIHNAL--SHCCLAGKVNEPQKNRILEEIEKSKA----NHFLILFRDSSCQ 1195
>gi|156104874 envoplakin [Homo sapiens]
Length = 2033
Score = 28.5 bits (62), Expect = 4.2
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 16/89 (17%)
Query: 22 EPERLPRKLRAELEAALGKKHKGGDSSSGPQRLVSFRLIRDLHQHLRERDSKLYLHELLE 81
E E+ +L+A+L+ GK+ SG ++ V +L+ DL + LR + + E+ +
Sbjct: 1205 ETEQEITRLKAKLQEMAGKR-------SGVEKEVE-KLLPDL-EVLRAQKPTVEYKEVTQ 1255
Query: 82 GSEIYLPEVVKPPRNPELVARLEKIKIQL 110
EVV+ R+PE++ ++++K QL
Sbjct: 1256 -------EVVRHERSPEVLREIDRLKAQL 1277
>gi|33359682 ephrin A1 isoform a precursor [Homo sapiens]
Length = 205
Score = 28.5 bits (62), Expect = 4.2
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 11/92 (11%)
Query: 17 PGGELEPERLPRKLRAELEAALGKKHKGGDSSSGPQRLVSFRLIRDLHQHLRERDSKLYL 76
P + PE+L K + LGK+ K G S + + + +HQH D L L
Sbjct: 95 PSAKHGPEKLSEKFQRFTPFTLGKEFKEGHS--------YYYISKPIHQH---EDRCLRL 143
Query: 77 HELLEGSEIYLPEVVKPPRNPELVARLEKIKI 108
+ G + P+ P+ L A ++++
Sbjct: 144 KVTVSGKITHSPQAHDNPQEKRLAADDPEVRV 175
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 28.1 bits (61), Expect = 5.5
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 11 LVRALGPGGEL--EPERLPRKLRAELEAALGKKHKGGDSSSGPQRL--VSFRLIRDLHQH 66
L RAL E E ER R LRAELEA L K G S +R V+ + DL
Sbjct: 1513 LTRALEEEQEAREELERQNRALRAELEALLSSKDDVGKSVHELERACRVAEQAANDLRAQ 1572
Query: 67 LRERDSKL 74
+ E + +L
Sbjct: 1573 VTELEDEL 1580
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 28.1 bits (61), Expect = 5.5
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 11 LVRALGPGGEL--EPERLPRKLRAELEAALGKKHKGGDSSSGPQRL--VSFRLIRDLHQH 66
L RAL E E ER R LRAELEA L K G S +R V+ + DL
Sbjct: 1505 LTRALEEEQEAREELERQNRALRAELEALLSSKDDVGKSVHELERACRVAEQAANDLRAQ 1564
Query: 67 LRERDSKL 74
+ E + +L
Sbjct: 1565 VTELEDEL 1572
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 28.1 bits (61), Expect = 5.5
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 11 LVRALGPGGEL--EPERLPRKLRAELEAALGKKHKGGDSSSGPQRL--VSFRLIRDLHQH 66
L RAL E E ER R LRAELEA L K G S +R V+ + DL
Sbjct: 1546 LTRALEEEQEAREELERQNRALRAELEALLSSKDDVGKSVHELERACRVAEQAANDLRAQ 1605
Query: 67 LRERDSKL 74
+ E + +L
Sbjct: 1606 VTELEDEL 1613
>gi|38202246 syntaphilin [Homo sapiens]
Length = 494
Score = 28.1 bits (61), Expect = 5.5
Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 23/126 (18%)
Query: 42 HKGGDSSSGPQRLVSFRLIRDLH--------QHLRERDSK----LYLHELLEGSEIYLPE 89
+KG DSS P+R + + L D H Q+L K +L L+ ++ L +
Sbjct: 43 YKGSDSSPTPRRSMKYTLCSDNHGIKPPTPEQYLTPLQQKEVCIRHLKARLKDTQDRLQD 102
Query: 90 VVKPPRNPELVARLEKIKIQLANEEYKRITRNVTCQDTRHGGTLSDLGKQVRSLKALVIT 149
+ +L +L +++ EE R+ + ++ R K+++ LK ++ T
Sbjct: 103 --RDTEIDDLKTQLSRMQEDWIEEECHRVEAQLALKEAR---------KEIKQLKQVIDT 151
Query: 150 IFNFIV 155
+ N ++
Sbjct: 152 VKNNLI 157
>gi|45446749 kinesin family member 5A [Homo sapiens]
Length = 1032
Score = 27.7 bits (60), Expect = 7.2
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 35 EAALGKKHKGGDSSSGPQRL-VSFRLIRDLHQHLRERDSKLYLHELLEGSEIYLPEV 90
+ + GK H PQ + + R+ RD+ H+ D L H + EIYL ++
Sbjct: 87 QTSSGKTHTMEGKLHDPQLMGIIPRIARDIFNHIYSMDENLEFHIKVSYFEIYLDKI 143
>gi|7705939 Rap guanine nucleotide exchange factor (GEF)-like 1
[Homo sapiens]
Length = 456
Score = 27.7 bits (60), Expect = 7.2
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 63 LHQHLRERDSKLYLHELLEGSEIYLPEVVKPP 94
L+Q LRE L LH+L+E E+ +PE +PP
Sbjct: 51 LYQGLRE--DTLRLHQLVETVELKIPEENQPP 80
>gi|14670354 general transcription factor II, i isoform 3 [Homo
sapiens]
Length = 977
Score = 27.3 bits (59), Expect = 9.4
Identities = 26/122 (21%), Positives = 48/122 (39%), Gaps = 8/122 (6%)
Query: 30 LRAELEAALGKKHKGGDSSSGPQRLVSFRLIRDLHQHLRERDSKLYLHELLEGSEIYLPE 89
LR ++E +K+ + GP + + L + H+ + LY+ L EG P
Sbjct: 340 LRKQVEELFERKYAQAIKAKGPVT-IPYPLFQS---HVED----LYVEGLPEGIPFRRPS 391
Query: 90 VVKPPRNPELVARLEKIKIQLANEEYKRITRNVTCQDTRHGGTLSDLGKQVRSLKALVIT 149
PR ++ E+I+ + E TR D G + ++ L+ +V
Sbjct: 392 TYGIPRLERILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQ 451
Query: 150 IF 151
+F
Sbjct: 452 LF 453
>gi|14670352 general transcription factor II, i isoform 2 [Homo
sapiens]
Length = 978
Score = 27.3 bits (59), Expect = 9.4
Identities = 26/122 (21%), Positives = 48/122 (39%), Gaps = 8/122 (6%)
Query: 30 LRAELEAALGKKHKGGDSSSGPQRLVSFRLIRDLHQHLRERDSKLYLHELLEGSEIYLPE 89
LR ++E +K+ + GP + + L + H+ + LY+ L EG P
Sbjct: 341 LRKQVEELFERKYAQAIKAKGPVT-IPYPLFQS---HVED----LYVEGLPEGIPFRRPS 392
Query: 90 VVKPPRNPELVARLEKIKIQLANEEYKRITRNVTCQDTRHGGTLSDLGKQVRSLKALVIT 149
PR ++ E+I+ + E TR D G + ++ L+ +V
Sbjct: 393 TYGIPRLERILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQ 452
Query: 150 IF 151
+F
Sbjct: 453 LF 454
>gi|14670350 general transcription factor II, i isoform 1 [Homo
sapiens]
Length = 998
Score = 27.3 bits (59), Expect = 9.4
Identities = 26/122 (21%), Positives = 48/122 (39%), Gaps = 8/122 (6%)
Query: 30 LRAELEAALGKKHKGGDSSSGPQRLVSFRLIRDLHQHLRERDSKLYLHELLEGSEIYLPE 89
LR ++E +K+ + GP + + L + H+ + LY+ L EG P
Sbjct: 361 LRKQVEELFERKYAQAIKAKGPVT-IPYPLFQS---HVED----LYVEGLPEGIPFRRPS 412
Query: 90 VVKPPRNPELVARLEKIKIQLANEEYKRITRNVTCQDTRHGGTLSDLGKQVRSLKALVIT 149
PR ++ E+I+ + E TR D G + ++ L+ +V
Sbjct: 413 TYGIPRLERILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQ 472
Query: 150 IF 151
+F
Sbjct: 473 LF 474
>gi|169881252 general transcription factor II, i isoform 4 [Homo
sapiens]
Length = 957
Score = 27.3 bits (59), Expect = 9.4
Identities = 26/122 (21%), Positives = 48/122 (39%), Gaps = 8/122 (6%)
Query: 30 LRAELEAALGKKHKGGDSSSGPQRLVSFRLIRDLHQHLRERDSKLYLHELLEGSEIYLPE 89
LR ++E +K+ + GP + + L + H+ + LY+ L EG P
Sbjct: 320 LRKQVEELFERKYAQAIKAKGPVT-IPYPLFQS---HVED----LYVEGLPEGIPFRRPS 371
Query: 90 VVKPPRNPELVARLEKIKIQLANEEYKRITRNVTCQDTRHGGTLSDLGKQVRSLKALVIT 149
PR ++ E+I+ + E TR D G + ++ L+ +V
Sbjct: 372 TYGIPRLERILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQ 431
Query: 150 IF 151
+F
Sbjct: 432 LF 433
>gi|9845285 cytochrome P450, family 26, subfamily b, polypeptide 1
[Homo sapiens]
Length = 512
Score = 27.3 bits (59), Expect = 9.4
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Query: 60 IRDLHQHLRERDSKLYLHELLEGSEIYLPEV 90
I D+H++ R+ SK++ HE LE YLP++
Sbjct: 134 IGDIHRNKRKVFSKIFSHEALES---YLPKI 161
>gi|46559747 hypothetical protein LOC399947 [Homo sapiens]
Length = 197
Score = 27.3 bits (59), Expect = 9.4
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 102 RLEKIKIQLANEEYKRITRNVTCQDTRHGGTLSDLGKQ 139
R++K K+Q A EEY+R C +R GG L G+Q
Sbjct: 88 RMKKRKMQRAQEEYER----DHCSGSRGGGGLPRPGRQ 121
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,348,933
Number of Sequences: 37866
Number of extensions: 315588
Number of successful extensions: 1061
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1050
Number of HSP's gapped (non-prelim): 34
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Search text |
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.