Guide to the Human Genome
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Search of human proteins with 226442705

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|226442705 alanine-glyoxylate aminotransferase 2-like 1
isoform 2 [Homo sapiens]
         (493 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|226442705 alanine-glyoxylate aminotransferase 2-like 1 isofor...   996   0.0  
gi|37574042 alanine-glyoxylate aminotransferase 2-like 1 isoform...   989   0.0  
gi|226442709 alanine-glyoxylate aminotransferase 2-like 1 isofor...   875   0.0  
gi|24119277 alanine-glyoxylate aminotransferase 2-like 2 [Homo s...   591   e-169
gi|13994255 alanine-glyoxylate aminotransferase 2 precursor [Hom...   258   7e-69
gi|4557809 ornithine aminotransferase precursor [Homo sapiens]        110   4e-24
gi|188536080 4-aminobutyrate aminotransferase precursor [Homo sa...    87   3e-17
gi|38679950 4-aminobutyrate aminotransferase precursor [Homo sap...    87   3e-17
gi|38679946 4-aminobutyrate aminotransferase precursor [Homo sap...    87   3e-17
gi|56550043 sarcolemma associated protein [Homo sapiens]               31   2.9  
gi|166064027 cyclin-dependent kinase-like 3 isoform 1 [Homo sapi...    30   6.6  
gi|166064025 cyclin-dependent kinase-like 3 isoform 2 [Homo sapi...    30   6.6  
gi|55741653 hypothetical protein LOC57691 [Homo sapiens]               30   6.6  
gi|31543159 hypothetical protein LOC57020 [Homo sapiens]               30   6.6  
gi|221139779 zinc finger protein 534 isoform 2 [Homo sapiens]          29   8.6  
gi|221139777 zinc finger protein 534 isoform 1 [Homo sapiens]          29   8.6  

>gi|226442705 alanine-glyoxylate aminotransferase 2-like 1 isoform 2
           [Homo sapiens]
          Length = 493

 Score =  996 bits (2574), Expect = 0.0
 Identities = 493/493 (100%), Positives = 493/493 (100%)

Query: 1   MCELYSKRDTLGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVAHGV 60
           MCELYSKRDTLGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVAHGV
Sbjct: 1   MCELYSKRDTLGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVAHGV 60

Query: 61  VKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLALRLARQF 120
           VKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLALRLARQF
Sbjct: 61  VKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLALRLARQF 120

Query: 121 RGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYREDHADSA 180
           RGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYREDHADSA
Sbjct: 121 RGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYREDHADSA 180

Query: 181 SAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFIAD 240
           SAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFIAD
Sbjct: 181 SAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFIAD 240

Query: 241 EVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFSSSGMEY 300
           EVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFSSSGMEY
Sbjct: 241 EVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFSSSGMEY 300

Query: 301 FNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDIRGIGLF 360
           FNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDIRGIGLF
Sbjct: 301 FNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDIRGIGLF 360

Query: 361 IGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMV 420
           IGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMV
Sbjct: 361 IGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMV 420

Query: 421 DQLDRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSRKRNGMC 480
           DQLDRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSRKRNGMC
Sbjct: 421 DQLDRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSRKRNGMC 480

Query: 481 TDTHSLLSKRLKT 493
           TDTHSLLSKRLKT
Sbjct: 481 TDTHSLLSKRLKT 493


>gi|37574042 alanine-glyoxylate aminotransferase 2-like 1 isoform 1
           [Homo sapiens]
          Length = 499

 Score =  989 bits (2557), Expect = 0.0
 Identities = 493/499 (98%), Positives = 493/499 (98%), Gaps = 6/499 (1%)

Query: 1   MCELYSKRDTLGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVAH-- 58
           MCELYSKRDTLGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVAH  
Sbjct: 1   MCELYSKRDTLGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVAHVG 60

Query: 59  ----GVVKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLAL 114
               GVVKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLAL
Sbjct: 61  HCHPGVVKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLAL 120

Query: 115 RLARQFRGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYRE 174
           RLARQFRGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYRE
Sbjct: 121 RLARQFRGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYRE 180

Query: 175 DHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAG 234
           DHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAG
Sbjct: 181 DHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAG 240

Query: 235 GVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFS 294
           GVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFS
Sbjct: 241 GVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFS 300

Query: 295 SSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDI 354
           SSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDI
Sbjct: 301 SSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDI 360

Query: 355 RGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEE 414
           RGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEE
Sbjct: 361 RGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEE 420

Query: 415 DAKFMVDQLDRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSR 474
           DAKFMVDQLDRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSR
Sbjct: 421 DAKFMVDQLDRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSR 480

Query: 475 KRNGMCTDTHSLLSKRLKT 493
           KRNGMCTDTHSLLSKRLKT
Sbjct: 481 KRNGMCTDTHSLLSKRLKT 499


>gi|226442709 alanine-glyoxylate aminotransferase 2-like 1 isoform 3
           [Homo sapiens]
          Length = 441

 Score =  875 bits (2260), Expect = 0.0
 Identities = 435/435 (100%), Positives = 435/435 (100%)

Query: 59  GVVKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLALRLAR 118
           GVVKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLALRLAR
Sbjct: 7   GVVKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLALRLAR 66

Query: 119 QFRGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYREDHAD 178
           QFRGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYREDHAD
Sbjct: 67  QFRGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYREDHAD 126

Query: 179 SASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFI 238
           SASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFI
Sbjct: 127 SASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFI 186

Query: 239 ADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFSSSGM 298
           ADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFSSSGM
Sbjct: 187 ADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFSSSGM 246

Query: 299 EYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDIRGIG 358
           EYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDIRGIG
Sbjct: 247 EYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDIRGIG 306

Query: 359 LFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKF 418
           LFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKF
Sbjct: 307 LFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKF 366

Query: 419 MVDQLDRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSRKRNG 478
           MVDQLDRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSRKRNG
Sbjct: 367 MVDQLDRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSRKRNG 426

Query: 479 MCTDTHSLLSKRLKT 493
           MCTDTHSLLSKRLKT
Sbjct: 427 MCTDTHSLLSKRLKT 441


>gi|24119277 alanine-glyoxylate aminotransferase 2-like 2 [Homo
           sapiens]
          Length = 450

 Score =  591 bits (1523), Expect = e-169
 Identities = 282/432 (65%), Positives = 354/432 (81%), Gaps = 7/432 (1%)

Query: 7   KRDTLGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVAHG------V 60
           K DTL LR++ I  SC++FF  DP+KIVRAQ QYM+DE G +Y+DCI+NVAH       V
Sbjct: 8   KADTLALRQRLISSSCRLFFPEDPVKIVRAQGQYMYDEQGAEYIDCISNVAHVGHCHPLV 67

Query: 61  VKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLALRLARQF 120
           V+AA +Q ++LNTNSR+LHDNIV+YA+RLS TLPE+L V YF NSGSEANDLALRLAR +
Sbjct: 68  VQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEQLCVFYFLNSGSEANDLALRLARHY 127

Query: 121 RGHQDVITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYREDHADSA 180
            GHQDV+ LDHAYHGHLSSLI+ISPYKF +  D +KE+VHVAP PDTYRG YREDH + A
Sbjct: 128 TGHQDVVVLDHAYHGHLSSLIDISPYKF-RNLDGQKEWVHVAPLPDTYRGPYREDHPNPA 186

Query: 181 SAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFIAD 240
            AYA+EVK+++  A   GRKIAAF AES+ S GGQIIPPAGYF +VAE++  AGGVF+AD
Sbjct: 187 MAYANEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSQVAEHIRKAGGVFVAD 246

Query: 241 EVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAFSSSGMEY 300
           E+QVGFGRVGKHFW+FQ+ G+DFVPDIVTMGK +GNGHPVACV  T+ +A AF ++G+EY
Sbjct: 247 EIQVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGHPVACVAATQPVARAFEATGVEY 306

Query: 301 FNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDIRGIGLF 360
           FNT+GG+PVSCAVGLAVL+++E E LQ +A  VG++L +LL +QK KH ++GD+RG+GLF
Sbjct: 307 FNTFGGSPVSCAVGLAVLNVLEKEQLQDHATSVGSFLMQLLGQQKIKHPIVGDVRGVGLF 366

Query: 361 IGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMV 420
           IG+DL+KD   RTPAT EA +++ ++KE  VLLS DGP RN+LK KPPMCF+ ++A+ +V
Sbjct: 367 IGVDLIKDEATRTPATEEAAYLVSRLKENYVLLSTDGPGRNILKFKPPMCFSLDNARQVV 426

Query: 421 DQLDRILTVLEE 432
            +LD ILT +EE
Sbjct: 427 AKLDAILTDMEE 438


>gi|13994255 alanine-glyoxylate aminotransferase 2 precursor [Homo
           sapiens]
          Length = 514

 Score =  258 bits (660), Expect = 7e-69
 Identities = 158/449 (35%), Positives = 243/449 (54%), Gaps = 40/449 (8%)

Query: 11  LGLRKKHIGPSCKVFFASDPIKIVRAQRQYMFDENGEQYLDCINNVA-------HGVVKA 63
           L + K+H+ P    +F   P+ + +   +++FD  G +YLD  + +        H  V A
Sbjct: 67  LEIHKEHLSPVVTAYFQK-PLLLHQGHMEWLFDAEGSRYLDFFSGIVTVSVGHCHPKVNA 125

Query: 64  -ALKQM-ELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDLALRLARQFR 121
            A KQ+  L +T++ F H  + EYA++L+A LPE L V +  NSGSEAN+LA+ +AR   
Sbjct: 126 VAQKQLGRLWHTSTVFFHPPMHEYAEKLAALLPEPLKVIFLVNSGSEANELAMLMARAHS 185

Query: 122 GHQDVITLDHAYHG---HLSSLIEISPYKFQKGKDVKKEFVHVAPT--PDTYRGKYREDH 176
            + D+I+   AYHG   +   L  +  YK +       +     PT  PD +RG +   H
Sbjct: 186 NNIDIISFRGAYHGCSPYTLGLTNVGTYKMELPGGTGCQ-----PTMCPDVFRGPWGGSH 240

Query: 177 A---------------DSASAYADEVKKIIEDAHNS-GRKIAAFIAESMQSCGGQIIPPA 220
                           D   A    +++  +    S  + IA F AE +Q   G +  P 
Sbjct: 241 CRDSPVQTIRKCSCAPDCCQAKDQYIEQFKDTLSTSVAKSIAGFFAEPIQGVNGVVQYPK 300

Query: 221 GYFQKVAEYVHGAGGVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPV 280
           G+ ++  E V   GGV IADEVQ GFGR+G HFW FQ +  D +PDIVTM K +GNG P+
Sbjct: 301 GFLKEAFELVRARGGVCIADEVQTGFGRLGSHFWGFQTH--DVLPDIVTMAKGIGNGFPM 358

Query: 281 ACVVTTKEIAEAFSSSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTEL 340
           A V+TT EIA++ +   +++FNT+GGNP++CA+G AVL++I+ E+LQ N++ VG Y+   
Sbjct: 359 AAVITTPEIAKSLAKC-LQHFNTFGGNPMACAIGSAVLEVIKEENLQENSQEVGTYMLLK 417

Query: 341 LKKQKAKHTLIGDIRGIGLFIGIDLVKDHLKRTPATAEAQHIIYK-MKEKRVLLSADGPH 399
             K + +  ++GD+RG GL IGI++V+D +   P   E  + I++  K   +L+      
Sbjct: 418 FAKLRDEFEIVGDVRGKGLMIGIEMVQDKISCRPLPREEVNQIHEDCKHMGLLVGRGSIF 477

Query: 400 RNVLKIKPPMCFTEEDAKFMVDQLDRILT 428
               +I P MC T+ +  F V+     LT
Sbjct: 478 SQTFRIAPSMCITKPEVDFAVEVFRSALT 506


>gi|4557809 ornithine aminotransferase precursor [Homo sapiens]
          Length = 439

 Score =  110 bits (274), Expect = 4e-24
 Identities = 107/424 (25%), Positives = 190/424 (44%), Gaps = 72/424 (16%)

Query: 30  PIKIVRAQRQYMFDENGEQYLDCIN-----NVAH---GVVKAALKQMELLNTNSRFLHDN 81
           P+ + R +  Y++D  G +Y D ++     N  H    +V A   Q++ L   SR  ++N
Sbjct: 59  PVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNN 118

Query: 82  IV----EYAKRL---SATLPEKLSVCYFTNSGSEANDLALRLARQF----RGHQD----V 126
           ++    EY  +L      LP         N+G EA + A +LAR++    +G Q     +
Sbjct: 119 VLGEYEEYITKLFNYHKVLP--------MNTGVEAGETACKLARKWGYTVKGIQKYKAKI 170

Query: 127 ITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKYREDHADSASAYAD- 185
           +     + G   S I  S                    P +Y G            Y D 
Sbjct: 171 VFAAGNFWGRTLSAISSST------------------DPTSYDGFGPFMPGFDIIPYNDL 212

Query: 186 -EVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFIADEVQV 244
             +++ ++D +     +AAF+ E +Q   G ++P  GY   V E       +FIADE+Q 
Sbjct: 213 PALERALQDPN-----VAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQT 267

Query: 245 GFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNG-HPVACVVTTKEIAEAFSSSGMEYFNT 303
           G  R G+  W    Y E+  PDIV +GK +  G +PV+ V+   +I         E+ +T
Sbjct: 268 GLARTGR--WLAVDY-ENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPG--EHGST 322

Query: 304 YGGNPVSCAVGLAVLDIIENEDLQGNAKRVGNYLTELLKKQKAKHTLIGDIRGIGLFIGI 363
           YGGNP+ C V +A L+++E E+L  NA ++G  L   L   K    ++  +RG GL   I
Sbjct: 323 YGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNEL--MKLPSDVVTAVRGKGLLNAI 380

Query: 364 DLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMVDQL 423
            +      +     +A  +  ++++  +L  A   H ++++  PP+   E++ +  ++ +
Sbjct: 381 VI------KETKDWDAWKVCLRLRDNGLL--AKPTHGDIIRFAPPLVIKEDELRESIEII 432

Query: 424 DRIL 427
           ++ +
Sbjct: 433 NKTI 436


>gi|188536080 4-aminobutyrate aminotransferase precursor [Homo
           sapiens]
          Length = 500

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 108/435 (24%), Positives = 176/435 (40%), Gaps = 69/435 (15%)

Query: 40  YMFDENGEQYLDCINNVAHGVV----KAALKQMELLNTNSRFLH---------DNIVEYA 86
           Y+ D +G + LD  + ++   +     A LK ++     S F++         +N VE  
Sbjct: 84  YLVDVDGNRMLDLYSQISSVPIGYSHPALLKLIQQPQNASMFVNRPALGILPPENFVEKL 143

Query: 87  KR-LSATLPEKLSVCYFTNSGSEANDLALR------------------------LARQFR 121
           ++ L +  P+ +S       GS +N+ AL+                        +  Q  
Sbjct: 144 RQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELETCMINQAP 203

Query: 122 GHQD--VITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKY------R 173
           G  D  +++   A+HG     +  +  K     D+      +AP P   R KY      +
Sbjct: 204 GCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFP---RLKYPLEEFVK 260

Query: 174 EDHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGA 233
           E+  + A    +EV+ +I       + +A  I E +QS GG       +F+K+ +     
Sbjct: 261 ENQQEEARCL-EEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIARKH 319

Query: 234 GGVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAF 293
           G  F+ DEVQ G G  GK FW+ + +G D   D++T  K M  G         KE  E  
Sbjct: 320 GCAFLVDEVQTGGGCTGK-FWAHEHWGLDDPADVMTFSKKMMTGG-----FFHKE--EFR 371

Query: 294 SSSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGN-YLTELLKKQKAKHTLIG 352
            ++    FNT+ G+P    +   V++II+ EDL  NA   G   LT LL  Q      I 
Sbjct: 372 PNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLDLQARYPQFIS 431

Query: 353 DIRGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFT 412
            +RG G F   D        TP  +    +I   + K V+L   G     ++ +P + F 
Sbjct: 432 RVRGRGTFCSFD--------TPDDSIRNKLILIARNKGVVLGGCGD--KSIRFRPTLVFR 481

Query: 413 EEDAKFMVDQLDRIL 427
           +  A   ++    IL
Sbjct: 482 DHHAHLFLNIFSDIL 496


>gi|38679950 4-aminobutyrate aminotransferase precursor [Homo
           sapiens]
          Length = 500

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 108/435 (24%), Positives = 176/435 (40%), Gaps = 69/435 (15%)

Query: 40  YMFDENGEQYLDCINNVAHGVV----KAALKQMELLNTNSRFLH---------DNIVEYA 86
           Y+ D +G + LD  + ++   +     A LK ++     S F++         +N VE  
Sbjct: 84  YLVDVDGNRMLDLYSQISSVPIGYSHPALLKLIQQPQNASMFVNRPALGILPPENFVEKL 143

Query: 87  KR-LSATLPEKLSVCYFTNSGSEANDLALR------------------------LARQFR 121
           ++ L +  P+ +S       GS +N+ AL+                        +  Q  
Sbjct: 144 RQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELETCMINQAP 203

Query: 122 GHQD--VITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKY------R 173
           G  D  +++   A+HG     +  +  K     D+      +AP P   R KY      +
Sbjct: 204 GCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFP---RLKYPLEEFVK 260

Query: 174 EDHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGA 233
           E+  + A    +EV+ +I       + +A  I E +QS GG       +F+K+ +     
Sbjct: 261 ENQQEEARCL-EEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIARKH 319

Query: 234 GGVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAF 293
           G  F+ DEVQ G G  GK FW+ + +G D   D++T  K M  G         KE  E  
Sbjct: 320 GCAFLVDEVQTGGGCTGK-FWAHEHWGLDDPADVMTFSKKMMTGG-----FFHKE--EFR 371

Query: 294 SSSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGN-YLTELLKKQKAKHTLIG 352
            ++    FNT+ G+P    +   V++II+ EDL  NA   G   LT LL  Q      I 
Sbjct: 372 PNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLDLQARYPQFIS 431

Query: 353 DIRGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFT 412
            +RG G F   D        TP  +    +I   + K V+L   G     ++ +P + F 
Sbjct: 432 RVRGRGTFCSFD--------TPDDSIRNKLILIARNKGVVLGGCGD--KSIRFRPTLVFR 481

Query: 413 EEDAKFMVDQLDRIL 427
           +  A   ++    IL
Sbjct: 482 DHHAHLFLNIFSDIL 496


>gi|38679946 4-aminobutyrate aminotransferase precursor [Homo
           sapiens]
          Length = 500

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 108/435 (24%), Positives = 176/435 (40%), Gaps = 69/435 (15%)

Query: 40  YMFDENGEQYLDCINNVAHGVV----KAALKQMELLNTNSRFLH---------DNIVEYA 86
           Y+ D +G + LD  + ++   +     A LK ++     S F++         +N VE  
Sbjct: 84  YLVDVDGNRMLDLYSQISSVPIGYSHPALLKLIQQPQNASMFVNRPALGILPPENFVEKL 143

Query: 87  KR-LSATLPEKLSVCYFTNSGSEANDLALR------------------------LARQFR 121
           ++ L +  P+ +S       GS +N+ AL+                        +  Q  
Sbjct: 144 RQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELETCMINQAP 203

Query: 122 GHQD--VITLDHAYHGHLSSLIEISPYKFQKGKDVKKEFVHVAPTPDTYRGKY------R 173
           G  D  +++   A+HG     +  +  K     D+      +AP P   R KY      +
Sbjct: 204 GCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFP---RLKYPLEEFVK 260

Query: 174 EDHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGA 233
           E+  + A    +EV+ +I       + +A  I E +QS GG       +F+K+ +     
Sbjct: 261 ENQQEEARCL-EEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIARKH 319

Query: 234 GGVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTTKEIAEAF 293
           G  F+ DEVQ G G  GK FW+ + +G D   D++T  K M  G         KE  E  
Sbjct: 320 GCAFLVDEVQTGGGCTGK-FWAHEHWGLDDPADVMTFSKKMMTGG-----FFHKE--EFR 371

Query: 294 SSSGMEYFNTYGGNPVSCAVGLAVLDIIENEDLQGNAKRVGN-YLTELLKKQKAKHTLIG 352
            ++    FNT+ G+P    +   V++II+ EDL  NA   G   LT LL  Q      I 
Sbjct: 372 PNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNAAHAGKALLTGLLDLQARYPQFIS 431

Query: 353 DIRGIGLFIGIDLVKDHLKRTPATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFT 412
            +RG G F   D        TP  +    +I   + K V+L   G     ++ +P + F 
Sbjct: 432 RVRGRGTFCSFD--------TPDDSIRNKLILIARNKGVVLGGCGD--KSIRFRPTLVFR 481

Query: 413 EEDAKFMVDQLDRIL 427
           +  A   ++    IL
Sbjct: 482 DHHAHLFLNIFSDIL 496


>gi|56550043 sarcolemma associated protein [Homo sapiens]
          Length = 811

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 19/111 (17%)

Query: 378 EAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDAKFMVDQLDRILTVLEEAMGTK 437
           E QH I +M+EK   L A      +  ++    FT E            LT L+E + +K
Sbjct: 341 ELQHKIDEMEEKEQELQA-----KIEALQADNDFTNER-----------LTALQEHLLSK 384

Query: 438 TE---SVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSRKRNGMCTDTHS 485
           +    +   +   C+ K++ E H+    + T  SKEN +R +    +DT S
Sbjct: 385 SGGDCTFIHQFIECQKKLIVEGHLTKAVEETKLSKENQTRAKESDFSDTLS 435


>gi|166064027 cyclin-dependent kinase-like 3 isoform 1 [Homo
           sapiens]
          Length = 592

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 416 AKFMVDQLDRILT--VLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPS 473
           A   +D  DRI +  +L     T+   +       K K+L+EA +  L      SKEN  
Sbjct: 265 ACLQIDPADRISSSDLLHHEYFTRDGFIEKFMPELKAKLLQEAKVNSLIKPKESSKENEL 324

Query: 474 RKRNGMCTDTHSLLS 488
           RK       T++LLS
Sbjct: 325 RKDERKTVYTNTLLS 339


>gi|166064025 cyclin-dependent kinase-like 3 isoform 2 [Homo
           sapiens]
          Length = 455

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 416 AKFMVDQLDRILT--VLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPS 473
           A   +D  DRI +  +L     T+   +       K K+L+EA +  L      SKEN  
Sbjct: 265 ACLQIDPADRISSSDLLHHEYFTRDGFIEKFMPELKAKLLQEAKVNSLIKPKESSKENEL 324

Query: 474 RKRNGMCTDTHSLLS 488
           RK       T++LLS
Sbjct: 325 RKDERKTVYTNTLLS 339


>gi|55741653 hypothetical protein LOC57691 [Homo sapiens]
          Length = 787

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 10/113 (8%)

Query: 374 PATAEAQHIIYKMKEKRVLLSADGPHRNVLKIKPPMCFTEEDA----------KFMVDQL 423
           PA  EA        E  +   ++GP R VL+    +C  +E+           K    Q 
Sbjct: 14  PAGPEASESTTDENEDDIQFVSEGPSRPVLEYIDLVCGDDENPSAYYSDILFPKMPKRQG 73

Query: 424 DRILTVLEEAMGTKTESVTSENTPCKTKMLKEAHIELLRDSTTDSKENPSRKR 476
           D +  +  + + T TE+       C+    KE H E +     + K + S K+
Sbjct: 74  DFLHFLNVKKVKTDTENNEVSKNHCRLSKAKEPHFEYIEQPIIEEKPSLSSKK 126


>gi|31543159 hypothetical protein LOC57020 [Homo sapiens]
          Length = 963

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)

Query: 179 SASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFI 238
           S +  A E +K+++  H+  RK AAF+   +  C   I   AG F ++  Y+H +G V +
Sbjct: 677 SVNRLAMETRKVMKGNHS--RKTAAFVRACVAYCFITIPSLAGIFTRLNLYLH-SGQVAL 733

Query: 239 ADE 241
           A++
Sbjct: 734 ANQ 736


>gi|221139779 zinc finger protein 534 isoform 2 [Homo sapiens]
          Length = 674

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 5/83 (6%)

Query: 23  KVFFASDPI----KIVRAQRQYMFDENGEQYLDCINNVAHGVVKAALKQMELLNTNSRFL 78
           KVF  +  +    KI    R+Y  +E G+ +  C +  AH ++    K  E ++    F 
Sbjct: 402 KVFIGNSRLARHRKIHTGGRRYKCNECGKAFRTCSDLTAHLLIHTGEKPYECIDCGKVFR 461

Query: 79  HDNIVEYAKRL-SATLPEKLSVC 100
           H + + Y  R+ +   P K + C
Sbjct: 462 HKSSLTYHCRIHTGEKPYKCNEC 484


>gi|221139777 zinc finger protein 534 isoform 1 [Homo sapiens]
          Length = 661

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 5/83 (6%)

Query: 23  KVFFASDPI----KIVRAQRQYMFDENGEQYLDCINNVAHGVVKAALKQMELLNTNSRFL 78
           KVF  +  +    KI    R+Y  +E G+ +  C +  AH ++    K  E ++    F 
Sbjct: 389 KVFIGNSRLARHRKIHTGGRRYKCNECGKAFRTCSDLTAHLLIHTGEKPYECIDCGKVFR 448

Query: 79  HDNIVEYAKRL-SATLPEKLSVC 100
           H + + Y  R+ +   P K + C
Sbjct: 449 HKSSLTYHCRIHTGEKPYKCNEC 471


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,514,280
Number of Sequences: 37866
Number of extensions: 808917
Number of successful extensions: 1787
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1759
Number of HSP's gapped (non-prelim): 19
length of query: 493
length of database: 18,247,518
effective HSP length: 106
effective length of query: 387
effective length of database: 14,233,722
effective search space: 5508450414
effective search space used: 5508450414
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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