Guide to the Human Genome
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Name: PIP4K2C Sequence: fasta or formatted (421aa) NCBI GI: 226371739
Description:

phosphatidylinositol-5-phosphate 4-kinase, type II, gamma isoform a

Referenced in:

Inositol Pathways

Other entries for this name:
alt mRNA [421aa] phosphatidylinositol-5-phosphate 4-kinase, type II, gamma isoform a
alt prot [403aa] phosphatidylinositol-5-phosphate 4-kinase, type II, gamma isoform b
alt prot [373aa] phosphatidylinositol-5-phosphate 4-kinase, type II, gamma isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         26           2
 C cysteine            0.7          3           1
 D aspartate           6.4         27           2
 E glutamate           7.1         30           3
 F phenylalanine       5.5         23           1
 G glycine             6.7         28           2
 H histidine           3.8         16           1
 I isoleucine          5.2         22           2
 K lysine              7.8         33           3
 L leucine             8.6         36           3
 M methionine          2.4         10           1
 N asparagine          3.3         14           2
 P proline             5.9         25           3
 Q glutamine           2.9         12           2
 R arginine            4.5         19           1
 S serine              8.3         35           3
 T threonine           3.1         13           1
 V valine              7.6         32           1
 W tryptophan          0.2          1           1
 Y tyrosine            3.8         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidylinositol-5-phosphate 4-kinase, type II,... 
PIP4K2C               1.000   phosphatidylinositol-5-phosphate 4-kinase, type II,...
PIP4K2C               0.938   phosphatidylinositol-5-phosphate 4-kinase, type II,...
PIP4K2C               0.859   phosphatidylinositol-5-phosphate 4-kinase, type II,...
PIP4K2B               0.619   phosphatidylinositol-5-phosphate 4-kinase, type II, b...
PIP4K2A               0.607   phosphatidylinositol-5-phosphate 4-kinase, type II, a...
PIP5K1C               0.172   phosphatidylinositol-4-phosphate 5-kinase, type I, g...
PIP5K1A               0.167   phosphatidylinositol-4-phosphate 5-kinase, type I, ...
PIP5K1A               0.167   phosphatidylinositol-4-phosphate 5-kinase, type I, ...
PIP5K1A               0.167   phosphatidylinositol-4-phosphate 5-kinase, type I, al...
PIP5K1B               0.166   phosphatidylinositol-4-phosphate 5-kinase, type I, be...
PIP5K1A               0.137   phosphatidylinositol-4-phosphate 5-kinase, type I, ...
PIP5KL1               0.090   phosphatidylinositol-4-phosphate 5-kinase-like 1 is...
PIP5KL1               0.049   phosphatidylinositol-4-phosphate 5-kinase-like 1 iso...
PIKFYVE               0.045   phosphatidylinositol-3-phosphate 5-kinase type III ...
DOC2B                 0.010   double C2-like domains, beta 
MYSM1                 0.008   Myb-like, SWIRM and MPN domains 1 
HSP90AB1              0.008   heat shock 90kDa protein 1, beta 
UGT1A10               0.006   UDP glycosyltransferase 1 family, polypeptide A10 pr...
HSP90AA1              0.006   heat shock 90kDa protein 1, alpha isoform 2 
HSP90AA1              0.006   heat shock 90kDa protein 1, alpha isoform 1 
C11orf88              0.006   hypothetical protein LOC399949 isoform 2 
CCDC151               0.006   coiled-coil domain containing 151 
EIF4B                 0.006   eukaryotic translation initiation factor 4B 
FAM50A                0.005   XAP-5 protein 
KRI1                  0.005   KRI1 homolog 
HIRIP3                0.005   HIRA interacting protein 3 
PHC3                  0.005   polyhomeotic like 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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