Search of human proteins with 226061853

Search of human proteins with 226061853

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|226061853 TatD DNase domain containing 3 isoform 5 [Homo
sapiens]
         (281 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|226061853 TatD DNase domain containing 3 isoform 5 [Homo sapi...   553   e-158
gi|110349730 TatD DNase domain containing 3 isoform 1 [Homo sapi...   534   e-152
gi|110349734 TatD DNase domain containing 3 isoform 2 [Homo sapi...   531   e-151
gi|226061614 TatD DNase domain containing 3 isoform 4 [Homo sapi...   481   e-136
gi|226061595 TatD DNase domain containing 3 isoform 3 [Homo sapi...   462   e-130
gi|14042943 TatD DNase domain containing 1 isoform a [Homo sapiens]    64   2e-10
gi|225903439 TatD DNase domain containing 1 isoform b [Homo sapi...    58   1e-08
gi|225903424 TatD DNase domain containing 2 [Homo sapiens]             48   1e-05
gi|7662645 mitochondrial ribosomal protein S18B [Homo sapiens]         32   0.81 
gi|32698724 patatin-like phospholipase domain containing 2 [Homo...    30   2.4  
gi|148806891 hypothetical protein LOC54906 [Homo sapiens]              30   2.4  
gi|4504191 mutS homolog 6 [Homo sapiens]                               30   3.1  
gi|222418558 methylenetetrahydrofolate dehydrogenase 2-like [Hom...    29   5.3  
gi|52485853 integrin, alpha 11 precursor [Homo sapiens]                28   6.9  
gi|143770880 laminin, beta 4 [Homo sapiens]                            28   9.0  
gi|7661952 squamous cell carcinoma antigen recognized by T cells...    28   9.0  

>gi|226061853 TatD DNase domain containing 3 isoform 5 [Homo
           sapiens]
          Length = 281

 Score =  553 bits (1424), Expect = e-158
 Identities = 281/281 (100%), Positives = 281/281 (100%)

Query: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60
           MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN
Sbjct: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60

Query: 61  GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTG 120
           GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTG
Sbjct: 61  GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTG 120

Query: 121 EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM 180
           EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM
Sbjct: 121 EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM 180

Query: 181 EGVRAGYFFSIPPSIIRSGQLLSLFSKKQKLVKQLPLTSICLETDSPALGPEKQVRNEPW 240
           EGVRAGYFFSIPPSIIRSGQLLSLFSKKQKLVKQLPLTSICLETDSPALGPEKQVRNEPW
Sbjct: 181 EGVRAGYFFSIPPSIIRSGQLLSLFSKKQKLVKQLPLTSICLETDSPALGPEKQVRNEPW 240

Query: 241 NISISAEYIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK 281
           NISISAEYIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK
Sbjct: 241 NISISAEYIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK 281


>gi|110349730 TatD DNase domain containing 3 isoform 1 [Homo
           sapiens]
          Length = 274

 Score =  534 bits (1375), Expect = e-152
 Identities = 274/281 (97%), Positives = 274/281 (97%), Gaps = 7/281 (2%)

Query: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60
           MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN
Sbjct: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60

Query: 61  GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTG 120
           GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTG
Sbjct: 61  GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTG 120

Query: 121 EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM 180
           EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM
Sbjct: 121 EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM 180

Query: 181 EGVRAGYFFSIPPSIIRSGQLLSLFSKKQKLVKQLPLTSICLETDSPALGPEKQVRNEPW 240
           EGVRAGYFFSIPPSIIRSGQ       KQKLVKQLPLTSICLETDSPALGPEKQVRNEPW
Sbjct: 181 EGVRAGYFFSIPPSIIRSGQ-------KQKLVKQLPLTSICLETDSPALGPEKQVRNEPW 233

Query: 241 NISISAEYIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK 281
           NISISAEYIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK
Sbjct: 234 NISISAEYIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK 274


>gi|110349734 TatD DNase domain containing 3 isoform 2 [Homo
           sapiens]
          Length = 273

 Score =  531 bits (1369), Expect = e-151
 Identities = 273/281 (97%), Positives = 273/281 (97%), Gaps = 8/281 (2%)

Query: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60
           MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN
Sbjct: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60

Query: 61  GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTG 120
           GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTG
Sbjct: 61  GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTG 120

Query: 121 EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM 180
           EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM
Sbjct: 121 EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM 180

Query: 181 EGVRAGYFFSIPPSIIRSGQLLSLFSKKQKLVKQLPLTSICLETDSPALGPEKQVRNEPW 240
           EGVRAGYFFSIPPSIIRSGQ        QKLVKQLPLTSICLETDSPALGPEKQVRNEPW
Sbjct: 181 EGVRAGYFFSIPPSIIRSGQ--------QKLVKQLPLTSICLETDSPALGPEKQVRNEPW 232

Query: 241 NISISAEYIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK 281
           NISISAEYIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK
Sbjct: 233 NISISAEYIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK 273


>gi|226061614 TatD DNase domain containing 3 isoform 4 [Homo
           sapiens]
          Length = 253

 Score =  481 bits (1239), Expect = e-136
 Identities = 253/281 (90%), Positives = 253/281 (90%), Gaps = 28/281 (9%)

Query: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60
           MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN
Sbjct: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60

Query: 61  GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTG 120
           GFVLPCLGVHPVQGLPPEDQRSVTLK                     VGLDFSPRFAGTG
Sbjct: 61  GFVLPCLGVHPVQGLPPEDQRSVTLK---------------------VGLDFSPRFAGTG 99

Query: 121 EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM 180
           EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM
Sbjct: 100 EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM 159

Query: 181 EGVRAGYFFSIPPSIIRSGQLLSLFSKKQKLVKQLPLTSICLETDSPALGPEKQVRNEPW 240
           EGVRAGYFFSIPPSIIRSGQ       KQKLVKQLPLTSICLETDSPALGPEKQVRNEPW
Sbjct: 160 EGVRAGYFFSIPPSIIRSGQ-------KQKLVKQLPLTSICLETDSPALGPEKQVRNEPW 212

Query: 241 NISISAEYIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK 281
           NISISAEYIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK
Sbjct: 213 NISISAEYIAQVKGISVEEVIEVTTQNALKLFPKLRHLLQK 253


>gi|226061595 TatD DNase domain containing 3 isoform 3 [Homo
           sapiens]
          Length = 240

 Score =  462 bits (1190), Expect = e-130
 Identities = 234/234 (100%), Positives = 234/234 (100%)

Query: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60
           MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN
Sbjct: 1   MRAAGVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYN 60

Query: 61  GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTG 120
           GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTG
Sbjct: 61  GFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTG 120

Query: 121 EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM 180
           EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM
Sbjct: 121 EQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAM 180

Query: 181 EGVRAGYFFSIPPSIIRSGQLLSLFSKKQKLVKQLPLTSICLETDSPALGPEKQ 234
           EGVRAGYFFSIPPSIIRSGQLLSLFSKKQKLVKQLPLTSICLETDSPALGPEKQ
Sbjct: 181 EGVRAGYFFSIPPSIIRSGQLLSLFSKKQKLVKQLPLTSICLETDSPALGPEKQ 234


>gi|14042943 TatD DNase domain containing 1 isoform a [Homo sapiens]
          Length = 297

 Score = 63.5 bits (153), Expect = 2e-10
 Identities = 64/278 (23%), Positives = 124/278 (44%), Gaps = 43/278 (15%)

Query: 23  DLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHPVQ-GLPPEDQR 81
           DL DV+ +A +  V   +    +  + +  + L++  NG     +G HP + G   ++  
Sbjct: 31  DLQDVIGRAVEIGVKKFMITGGNLQDSKDALHLAQT-NGMFFSTVGCHPTRCGEFEKNNP 89

Query: 82  SVTLKDLDVALPIIENYKDRLLAIGEVGLDFSP-RFAGTGEQKEEQRQVLIRQIQLAKRL 140
            + LK+L   L + EN K +++AIGE GLDF   +F      K+ Q +   +Q +L+++ 
Sbjct: 90  DLYLKEL---LNLAENNKGKVVAIGECGLDFDRLQFC----PKDTQLKYFEKQFELSEQT 142

Query: 141 NLPVNVHSRSAGRPTINLLQEQGAEKV--LLHAFDGRPSVAMEGVRAGYFFSIPPSIIRS 198
            LP+ +H R++    +++++      V  ++H+FDG    A   +    +       +++
Sbjct: 143 KLPMFLHCRNSHAEFLDIMKRNRDRCVGGVVHSFDGTKEAAAALIDLDLYIGFNGCSLKT 202

Query: 199 GQLLSLFSKKQKLVKQLPLTSICLETDSPALG---------------PEKQV-------- 235
              L       +++K +P   + +ETD+P  G               P K+         
Sbjct: 203 EANL-------EVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLK 255

Query: 236 -RNEPWNISISAEYIAQVKGISVEEVIEVTTQNALKLF 272
            RNEP +I    E ++ V+     E+      N +K+F
Sbjct: 256 DRNEPCHIIQILEIMSAVRDEDPLELANTLYNNTIKVF 293


>gi|225903439 TatD DNase domain containing 1 isoform b [Homo
           sapiens]
          Length = 250

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 57/241 (23%), Positives = 107/241 (44%), Gaps = 42/241 (17%)

Query: 60  NGFVLPCLGVHPVQ-GLPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSP-RFA 117
           NG     +G HP + G   ++   + LK+L   L + EN K +++AIGE GLDF   +F 
Sbjct: 20  NGMFFSTVGCHPTRCGEFEKNNPDLYLKEL---LNLAENNKGKVVAIGECGLDFDRLQFC 76

Query: 118 GTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQGAEKV--LLHAFDGR 175
                K+ Q +   +Q +L+++  LP+ +H R++    +++++      V  ++H+FDG 
Sbjct: 77  ----PKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIMKRNRDRCVGGVVHSFDGT 132

Query: 176 PSVAMEGVRAGYFFSIPPSIIRSGQLLSLFSKKQKLVKQLPLTSICLETDSPALG----- 230
              A   +    +       +++   L       +++K +P   + +ETD+P  G     
Sbjct: 133 KEAAAALIDLDLYIGFNGCSLKTEANL-------EVLKSIPSEKLMIETDAPWCGVKSTH 185

Query: 231 ----------PEKQV---------RNEPWNISISAEYIAQVKGISVEEVIEVTTQNALKL 271
                     P K+          RNEP +I    E ++ V+     E+      N +K+
Sbjct: 186 AGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQILEIMSAVRDEDPLELANTLYNNTIKV 245

Query: 272 F 272
           F
Sbjct: 246 F 246


>gi|225903424 TatD DNase domain containing 2 [Homo sapiens]
          Length = 761

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 13/179 (7%)

Query: 101 RLLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQ 160
           + +A GE+GLD+S +         EQ +V  RQ+QLA  L  P+ +H R A    + +++
Sbjct: 587 KAVAFGEMGLDYSYKCT---TPVPEQHKVFERQLQLAVSLKKPLVIHCREADEDLLEIMK 643

Query: 161 E--QGAEKVLLHAFDGRPSVAMEGVRAGYFFSIPPSIIRSGQLLSLFSKKQKLVKQLPLT 218
           +      K+  H F G   V    ++  YF ++           S +  ++ L +Q+PL 
Sbjct: 644 KFVPPDYKIHRHCFTGSYPVIEPLLK--YFPNMSVGFTAVLTYSSAWEAREAL-RQIPLE 700

Query: 219 SICLETDSPALGPEKQVRN-----EPWNISISAEYIAQVKGISVEEVIEVTTQNALKLF 272
            I +ETD+P   P +  ++      P     +   IA+VK   +   +    +N  +L+
Sbjct: 701 RIIVETDAPYFLPRQVPKSLCQYAHPGLALHTVREIARVKDQPLSLTLAALRENTSRLY 759


>gi|7662645 mitochondrial ribosomal protein S18B [Homo sapiens]
          Length = 258

 Score = 31.6 bits (70), Expect = 0.81
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 6/63 (9%)

Query: 190 SIPPSIIRSGQLLSLFSKKQKLVKQLPLTSICL----ETDSPALGPEKQVRNEPWNISIS 245
           S+  +++R   +LSLF    ++  Q+PL ++C     E DS +  P    ++EPW    S
Sbjct: 4   SVLNTVLRRLPMLSLFRGSHRV--QVPLQTLCTKAPSEEDSLSSVPISPYKDEPWKYLES 61

Query: 246 AEY 248
            EY
Sbjct: 62  EEY 64


>gi|32698724 patatin-like phospholipase domain containing 2 [Homo
           sapiens]
          Length = 504

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 4/58 (6%)

Query: 142 LPVNVHSRSAGRPTINLLQEQGAEKVLLHAFDGRPSVAMEGVRAG----YFFSIPPSI 195
           LP + H  ++GR  I+L +    E V++  F+ +  +    V +G    Y   IPPS+
Sbjct: 102 LPADSHEHASGRLGISLTRVSDGENVIISHFNSKDELIQANVCSGFIPVYCGLIPPSL 159


>gi|148806891 hypothetical protein LOC54906 [Homo sapiens]
          Length = 2430

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 29/137 (21%), Positives = 53/137 (38%), Gaps = 20/137 (14%)

Query: 116  FAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTI------NLLQEQGAEKVLL 169
            F G      +     ++Q+Q++  + L +  H    GRPT+       ++  +  E +  
Sbjct: 1455 FVGPTHPVGQDNFTQVQQMQVSAEMPLILTDHPGRTGRPTLPGKVTEEIVSSEHDEGL-- 1512

Query: 170  HAFDGRPSV--------AMEGVRAGYFFSIPPSIIRSGQLLSLFSKKQKLVKQLPLTSIC 221
             +F G+           A      G F   P  +++SG  L   S +    + L L  + 
Sbjct: 1513 -SFSGKVQCYGRELNQPASAAKCTGDFSPSPEKLVKSGNPLQPVSIEN---RNLDLKHLV 1568

Query: 222  LETDSPALGPEKQVRNE 238
            LE+  P  GP   + N+
Sbjct: 1569 LESSEPPFGPRNVIENK 1585


>gi|4504191 mutS homolog 6 [Homo sapiens]
          Length = 1360

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)

Query: 166 KVLLHAFDGRPSVAMEGVRAGYFFSIPPSIIRSGQLLSLFSKKQKLVKQLPLTSICLETD 225
           K LL  + G  S + E  + G+F+S  P I+R+ Q       K K +K+L L ++C E  
Sbjct: 145 KRLLKPYTG--SKSKEAQKGGHFYSAKPEILRAMQRADEALNKDK-IKRLEL-AVCDEPS 200

Query: 226 SPALGPEKQV 235
            P    E +V
Sbjct: 201 EPEEEEEMEV 210


>gi|222418558 methylenetetrahydrofolate dehydrogenase 2-like [Homo
           sapiens]
          Length = 347

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 18/118 (15%)

Query: 174 GRPSVAMEGVRAGYFFSIPPSIIRSGQLLSLFSKKQ---------KLVKQLPLTSICLET 224
           G P  A  G R+        +II SG  ++   +K+          L  + P  SI L  
Sbjct: 33  GEPGSAFRGFRSSGVRH--EAIIISGTEMAKHIQKEIQRGVESWVSLGNRRPHLSIILVG 90

Query: 225 DSPALGPEKQVRNE---PWNISISAEYIAQVKGISVEEVIEVTTQNALKLFPKLRHLL 279
           D+PA      VRN+      + I +E I + K +S EE+++VT Q  L + P++  +L
Sbjct: 91  DNPA--SHTYVRNKIRAASAVGICSELILKPKDVSQEELLDVTDQ--LNMDPRVSGIL 144


>gi|52485853 integrin, alpha 11 precursor [Homo sapiens]
          Length = 1188

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 31  AKKANVVALVAVAEHSGEFEKIMQLSERYN--GFVLPCLGVHPVQGLPPE 78
           AKK  +V     +  S + EK++Q SER N   + +  LG +  +G+ PE
Sbjct: 262 AKKVMIVITDGESHDSPDLEKVIQQSERDNVTRYAVAVLGYYNRRGINPE 311


>gi|143770880 laminin, beta 4 [Homo sapiens]
          Length = 1761

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 10/93 (10%)

Query: 73   QGLPPEDQRSVTLKDLDVALPI-IENYKDRLLAIG---EVGLDFSPRFAGTGEQKEEQRQ 128
            + +PPED   V    LD+ LPI  +N  D L+ I    ++  D+        E+ +  ++
Sbjct: 1492 ENVPPEDIEKVANGVLDIHLPIPSQNLTDELVKIQKHMQLCEDYRTDENRLNEEADGAQK 1551

Query: 129  VLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQE 161
            +L++     K  N+ +N+        T+N LQ+
Sbjct: 1552 LLVKAKAAEKAANILLNLDK------TLNQLQQ 1578


>gi|7661952 squamous cell carcinoma antigen recognized by T cells 3
           [Homo sapiens]
          Length = 963

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 7/62 (11%)

Query: 209 QKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAEYIAQVKGISVE-EVIEVTTQN 267
           Q L +QL +  + L   + A      +RN PW +++ + Y+  ++   V+ +VI VT + 
Sbjct: 352 QYLDRQLKVKDLVLSVHNRA------IRNCPWTVALWSRYLLAMERHGVDHQVISVTFEK 405

Query: 268 AL 269
           AL
Sbjct: 406 AL 407


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.137    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,229,355
Number of Sequences: 37866
Number of extensions: 442763
Number of successful extensions: 1207
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1188
Number of HSP's gapped (non-prelim): 17
length of query: 281
length of database: 18,247,518
effective HSP length: 101
effective length of query: 180
effective length of database: 14,423,052
effective search space: 2596149360
effective search space used: 2596149360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.