Guide to the Human Genome
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Name: TATDN1 Sequence: fasta or formatted (250aa) NCBI GI: 225903439
Description:

TatD DNase domain containing 1 isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {297aa} TatD DNase domain containing 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         15           4
 C cysteine            4.0         10           1
 D aspartate           6.0         15           1
 E glutamate           7.6         19           1
 F phenylalanine       5.6         14           2
 G glycine             6.8         17           2
 H histidine           3.2          8           1
 I isoleucine          5.6         14           2
 K lysine              8.4         21           3
 L leucine            10.8         27           2
 M methionine          2.4          6           1
 N asparagine          6.0         15           2
 P proline             4.0         10           1
 Q glutamine           2.8          7           1
 R arginine            3.6          9           1
 S serine              4.8         12           1
 T threonine           5.6         14           1
 V valine              4.0         10           2
 W tryptophan          0.8          2           1
 Y tyrosine            2.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TatD DNase domain containing 1 isoform b 
TATDN1                1.000   TatD DNase domain containing 1 isoform a 
TATDN2                0.089   TatD DNase domain containing 2 
TATDN3                0.079   TatD DNase domain containing 3 isoform 1 
TATDN3                0.071   TatD DNase domain containing 3 isoform 2 
TATDN3                0.067   TatD DNase domain containing 3 isoform 5 
TATDN3                0.061   TatD DNase domain containing 3 isoform 3 
TATDN3                0.036   TatD DNase domain containing 3 isoform 4 
C7orf58               0.010   hypothetical protein LOC79974 isoform 2 
C7orf58               0.010   hypothetical protein LOC79974 isoform 1 
FBXL20                0.008   F-box and leucine-rich repeat protein 20 
KIF16B                0.008   kinesin-like motor protein C20orf23 
ZNF792                0.008   zinc finger protein 792 
SORL1                 0.006   sortilin-related receptor containing LDLR class A rep...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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