Guide to the Human Genome
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Name: TATDN1 Sequence: fasta or formatted (297aa) NCBI GI: 14042943
Description:

TatD DNase domain containing 1 isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {250aa} TatD DNase domain containing 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         16           4
 C cysteine            3.4         10           1
 D aspartate           6.7         20           2
 E glutamate           6.7         20           1
 F phenylalanine       6.1         18           2
 G glycine             7.4         22           2
 H histidine           3.0          9           1
 I isoleucine          6.7         20           2
 K lysine              8.4         25           3
 L leucine             9.8         29           2
 M methionine          2.7          8           1
 N asparagine          5.4         16           2
 P proline             3.7         11           1
 Q glutamine           3.4         10           1
 R arginine            4.4         13           1
 S serine              4.4         13           1
 T threonine           5.1         15           1
 V valine              4.7         14           2
 W tryptophan          0.7          2           1
 Y tyrosine            2.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TatD DNase domain containing 1 isoform a 
TATDN1                0.842   TatD DNase domain containing 1 isoform b 
TATDN2                0.075   TatD DNase domain containing 2 
TATDN3                0.075   TatD DNase domain containing 3 isoform 1 
TATDN3                0.070   TatD DNase domain containing 3 isoform 2 
TATDN3                0.066   TatD DNase domain containing 3 isoform 5 
TATDN3                0.061   TatD DNase domain containing 3 isoform 3 
TATDN3                0.039   TatD DNase domain containing 3 isoform 4 
C7orf58               0.009   hypothetical protein LOC79974 isoform 2 
C7orf58               0.009   hypothetical protein LOC79974 isoform 1 
FBXL20                0.007   F-box and leucine-rich repeat protein 20 
KIF16B                0.007   kinesin-like motor protein C20orf23 
ZNF792                0.007   zinc finger protein 792 
SORL1                 0.005   sortilin-related receptor containing LDLR class A rep...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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