Guide to the Human Genome
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Name: TATDN3 Sequence: fasta or formatted (274aa) NCBI GI: 110349730
Description:

TatD DNase domain containing 3 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {273aa} TatD DNase domain containing 3 isoform 2
alt prot {240aa} TatD DNase domain containing 3 isoform 3
alt prot {253aa} TatD DNase domain containing 3 isoform 4
alt prot {281aa} TatD DNase domain containing 3 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         21           2
 C cysteine            1.5          4           1
 D aspartate           4.7         13           2
 E glutamate           7.7         21           2
 F phenylalanine       3.3          9           2
 G glycine             6.6         18           1
 H histidine           2.6          7           1
 I isoleucine          5.8         16           2
 K lysine              6.2         17           2
 L leucine            12.0         33           2
 M methionine          1.1          3           1
 N asparagine          3.3          9           1
 P proline             6.2         17           2
 Q glutamine           6.2         17           1
 R arginine            5.8         16           1
 S serine              5.8         16           1
 T threonine           2.6          7           2
 V valine              9.1         25           2
 W tryptophan          0.4          1           1
 Y tyrosine            1.5          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TatD DNase domain containing 3 isoform 1 
TATDN3                0.986   TatD DNase domain containing 3 isoform 2 
TATDN3                0.986   TatD DNase domain containing 3 isoform 5 
TATDN3                0.897   TatD DNase domain containing 3 isoform 4 
TATDN3                0.812   TatD DNase domain containing 3 isoform 3 
TATDN1                0.085   TatD DNase domain containing 1 isoform a 
TATDN1                0.076   TatD DNase domain containing 1 isoform b 
TATDN2                0.047   TatD DNase domain containing 2 
PNPLA2                0.010   patatin-like phospholipase domain containing 2 [Homo...
C10orf18              0.010   hypothetical protein LOC54906 
NDUFA7                0.008   NADH dehydrogenase (ubiquinone) 1 alpha subcomplex,...
ITGA11                0.006   integrin, alpha 11 precursor 
RIMKLB                0.006   ribosomal modification protein rimK-like family mem...
LAMB4                 0.006   laminin, beta 4 
SART3                 0.006   squamous cell carcinoma antigen recognized by T cells...
MTHFD2L               0.006   methylenetetrahydrofolate dehydrogenase 2-like [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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