Guide to the Human Genome
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Name: PAK1 Sequence: fasta or formatted (545aa) NCBI GI: 42794769
Description:

p21-activated kinase 1 isoform 2

Referenced in:

Rho and Rac
Receptor Tyrosine Kinases

Other entries for this name:
alt prot [553aa] p21-activated kinase 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         35           3
 C cysteine            0.9          5           1
 D aspartate           6.1         33           6
 E glutamate           8.1         44           2
 F phenylalanine       2.4         13           1
 G glycine             5.0         27           2
 H histidine           1.5          8           1
 I isoleucine          5.5         30           2
 K lysine              8.6         47           4
 L leucine             7.9         43           2
 M methionine          3.1         17           1
 N asparagine          5.7         31           2
 P proline             7.9         43           3
 Q glutamine           3.9         21           3
 R arginine            3.7         20           1
 S serine              7.0         38           2
 T threonine           7.2         39           2
 V valine              6.1         33           2
 W tryptophan          0.7          4           1
 Y tyrosine            2.6         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   p21-activated kinase 1 isoform 2 
PAK1                  0.950   p21-activated kinase 1 isoform 1 
PAK3                  0.792   p21-activated kinase 3 isoform a 
PAK3                  0.792   p21-activated kinase 3 isoform a 
PAK3                  0.792   p21-activated kinase 3 isoform a 
PAK3                  0.782   p21-activated kinase 3 isoform d 
PAK3                  0.779   p21-activated kinase 3 isoform c 
PAK3                  0.774   p21-activated kinase 3 isoform b 
PAK2                  0.728   p21-activated kinase 2 
PAK4                  0.304   p21-activated kinase 4 isoform 2 
PAK4                  0.304   p21-activated kinase 4 isoform 2 
PAK7                  0.273   p21-activated kinase 7 
PAK7                  0.273   p21-activated kinase 7 
PAK4                  0.270   p21-activated kinase 4 isoform 1 
PAK4                  0.270   p21-activated kinase 4 isoform 1 
PAK4                  0.270   p21-activated kinase 4 isoform 1 
PAK6                  0.256   p21-activated kinase 6 
PAK6                  0.256   p21-activated kinase 6 
PAK6                  0.256   p21-activated kinase 6 
STK3                  0.206   serine/threonine kinase 3 
STK4                  0.202   serine/threonine kinase 4 
MST4                  0.200   serine/threonine protein kinase MST4 isoform 1 [Homo...
STK24                 0.197   serine/threonine kinase 24 isoform b 
STK24                 0.197   serine/threonine kinase 24 isoform a 
STK25                 0.197   serine/threonine kinase 25 
MAP4K2                0.176   mitogen-activated protein kinase kinase kinase kinas...
SLK                   0.170   serine/threonine kinase 2 
MAP4K3                0.170   mitogen-activated protein kinase kinase kinase kinas...
MYO3A                 0.169   myosin IIIA 
MAP4K5                0.167   mitogen-activated protein kinase kinase kinase kinas...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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