Guide to the Human Genome
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Search of human proteins with 224548945

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|224548945 Rhesus blood group, B glycoprotein [Homo sapiens]
         (458 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|224548945 Rhesus blood group, B glycoprotein [Homo sapiens]        917   0.0  
gi|7706683 Rh family, C glycoprotein [Homo sapiens]                   512   e-145
gi|156627565 Rh-associated glycoprotein [Homo sapiens]                413   e-115
gi|20336225 Rh blood group D antigen isoform 1 [Homo sapiens]         204   1e-52
gi|66346664 Rhesus blood group, CcEe antigens isoform 1 [Homo sa...   197   2e-50
gi|189095266 Rh blood group D antigen isoform 2 [Homo sapiens]        179   4e-45
gi|66346670 Rhesus blood group, CcEe antigens isoform 2 [Homo sa...   171   2e-42
gi|66346666 Rhesus blood group, CcEe antigens isoform 3 [Homo sa...    86   7e-17
gi|66346668 Rhesus blood group, CcEe antigens isoform 4 [Homo sa...    84   2e-16
gi|21361959 solute carrier family 35, member F5 [Homo sapiens]         33   0.41 
gi|116812579 transmembrane BAX inhibitor motif containing 4 [Hom...    33   0.54 
gi|38372901 Sp1 transcription factor isoform a [Homo sapiens]          31   2.0  
gi|218751903 Sp1 transcription factor isoform b [Homo sapiens]         31   2.0  
gi|59797060 arylsulfatase family, member I [Homo sapiens]              31   2.0  
gi|41872646 cullin 7 [Homo sapiens]                                    30   3.5  
gi|4507161 SRY-box 11 [Homo sapiens]                                   30   3.5  
gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]                   29   7.8  
gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]                  29   7.8  
gi|203098995 solute carrier family 2 (facilitated glucose transp...    29   7.8  

>gi|224548945 Rhesus blood group, B glycoprotein [Homo sapiens]
          Length = 458

 Score =  917 bits (2371), Expect = 0.0
 Identities = 458/458 (100%), Positives = 458/458 (100%)

Query: 1   MAGSPSRAAGRRLQLPLLCLFLQGATAVLFAVFVRYNHKTDAALWHRSNHSNADNEFYFR 60
           MAGSPSRAAGRRLQLPLLCLFLQGATAVLFAVFVRYNHKTDAALWHRSNHSNADNEFYFR
Sbjct: 1   MAGSPSRAAGRRLQLPLLCLFLQGATAVLFAVFVRYNHKTDAALWHRSNHSNADNEFYFR 60

Query: 61  YPSFQDVHAMVFVGFGFLMVFLQRYGFSSVGFTFLLAAFALQWSTLVQGFLHSFHGGHIH 120
           YPSFQDVHAMVFVGFGFLMVFLQRYGFSSVGFTFLLAAFALQWSTLVQGFLHSFHGGHIH
Sbjct: 61  YPSFQDVHAMVFVGFGFLMVFLQRYGFSSVGFTFLLAAFALQWSTLVQGFLHSFHGGHIH 120

Query: 121 VGVESMINADFCAGAVLISFGAVLGKTGPTQLLLMALLEVVLFGINEFVLLHLLGVRDAG 180
           VGVESMINADFCAGAVLISFGAVLGKTGPTQLLLMALLEVVLFGINEFVLLHLLGVRDAG
Sbjct: 121 VGVESMINADFCAGAVLISFGAVLGKTGPTQLLLMALLEVVLFGINEFVLLHLLGVRDAG 180

Query: 181 GSMTIHTFGAYFGLVLSRVLYRPQLEKSKHRQGSVYHSDLFAMIGTIFLWIFWPSFNAAL 240
           GSMTIHTFGAYFGLVLSRVLYRPQLEKSKHRQGSVYHSDLFAMIGTIFLWIFWPSFNAAL
Sbjct: 181 GSMTIHTFGAYFGLVLSRVLYRPQLEKSKHRQGSVYHSDLFAMIGTIFLWIFWPSFNAAL 240

Query: 241 TALGAGQHRTALNTYYSLAASTLGTFALSALVGEDGRLDMVHIQNAALAGGVVVGTSSEM 300
           TALGAGQHRTALNTYYSLAASTLGTFALSALVGEDGRLDMVHIQNAALAGGVVVGTSSEM
Sbjct: 241 TALGAGQHRTALNTYYSLAASTLGTFALSALVGEDGRLDMVHIQNAALAGGVVVGTSSEM 300

Query: 301 MLTPFGALAAGFLAGTVSTLGYKFFTPILESKFKVQDTCGVHNLHGMPGVLGALLGVLVA 360
           MLTPFGALAAGFLAGTVSTLGYKFFTPILESKFKVQDTCGVHNLHGMPGVLGALLGVLVA
Sbjct: 301 MLTPFGALAAGFLAGTVSTLGYKFFTPILESKFKVQDTCGVHNLHGMPGVLGALLGVLVA 360

Query: 361 GLATHEAYGDGLESVFPLIAEGQRSATSQAMHQLFGLFVTLMFASVGGGLGGLLLKLPFL 420
           GLATHEAYGDGLESVFPLIAEGQRSATSQAMHQLFGLFVTLMFASVGGGLGGLLLKLPFL
Sbjct: 361 GLATHEAYGDGLESVFPLIAEGQRSATSQAMHQLFGLFVTLMFASVGGGLGGLLLKLPFL 420

Query: 421 DSPPDSQHYEDQVHWQVPGEHEDKAQRPLRVEEADTQA 458
           DSPPDSQHYEDQVHWQVPGEHEDKAQRPLRVEEADTQA
Sbjct: 421 DSPPDSQHYEDQVHWQVPGEHEDKAQRPLRVEEADTQA 458


>gi|7706683 Rh family, C glycoprotein [Homo sapiens]
          Length = 479

 Score =  512 bits (1318), Expect = e-145
 Identities = 248/432 (57%), Positives = 319/432 (73%), Gaps = 5/432 (1%)

Query: 12  RLQLPLLCLFLQGATAVLFAVFVRYNHKTDAALWHRSNHSNA---DNEFYFRYPSFQDVH 68
           R +LPL CL LQ    +LF VFVRY+ + DA  W    H N    +NEFY+RYPSFQDVH
Sbjct: 8   RWRLPLTCLLLQVIMVILFGVFVRYDFEADAHWWSERTHKNLSDMENEFYYRYPSFQDVH 67

Query: 69  AMVFVGFGFLMVFLQRYGFSSVGFTFLLAAFALQWSTLVQGFLHSFHGGHIHVGVESMIN 128
            MVFVGFGFLM FLQRYGFS+VGF FLLAAF +QW+ L+QG+ H     +I VGVE++IN
Sbjct: 68  VMVFVGFGFLMTFLQRYGFSAVGFNFLLAAFGIQWALLMQGWFHFLQDRYIVVGVENLIN 127

Query: 129 ADFCAGAVLISFGAVLGKTGPTQLLLMALLEVVLFGINEFVLLHLLGVRDAGGSMTIHTF 188
           ADFC  +V ++FGAVLGK  P QLL+M   +V LF +NEF+LL+LL V+DAGGSMTIHTF
Sbjct: 128 ADFCVASVCVAFGAVLGKVSPIQLLIMTFFQVTLFAVNEFILLNLLKVKDAGGSMTIHTF 187

Query: 189 GAYFGLVLSRVLYRPQLEKSKHRQGSVYHSDLFAMIGTIFLWIFWPSFNAALTALGAGQH 248
           GAYFGL ++R+LYR  LE+SK RQ SVY SDLFAMIGT+FLW++WPSFN+A++  G  QH
Sbjct: 188 GAYFGLTVTRILYRRNLEQSKERQNSVYQSDLFAMIGTLFLWMYWPSFNSAISYHGDSQH 247

Query: 249 RTALNTYYSLAASTLGTFALSALVGEDGRLDMVHIQNAALAGGVVVGTSSEMMLTPFGAL 308
           R A+NTY SLAA  L + A+S+ + + G+LDMVHIQNA LAGGV VGT++EMML P+GAL
Sbjct: 248 RAAINTYCSLAACVLTSVAISSALHKKGKLDMVHIQNATLAGGVAVGTAAEMMLMPYGAL 307

Query: 309 AAGFLAGTVSTLGYKFFTPILESKFKVQDTCGVHNLHGMPGVLGALLGVLVAGLATHEAY 368
             GF+ G +STLG+ + TP LES+  +QDTCG++NLHG+PG++G ++G + A  A+ E Y
Sbjct: 308 IIGFVCGIISTLGFVYLTPFLESRLHIQDTCGINNLHGIPGIIGGIVGAVTAASASLEVY 367

Query: 369 G-DGLESVFPLIA-EGQRSATSQAMHQLFGLFVTLMFASVGGGLGGLLLKLPFLDSPPDS 426
           G +GL   F      G  +A +Q   Q++GL VTL  A +GG + GL+L+LPF   P D 
Sbjct: 368 GKEGLVHSFDFQGFNGDWTARTQGKFQIYGLLVTLAMALMGGIIVGLILRLPFWGQPSDE 427

Query: 427 QHYEDQVHWQVP 438
             +ED V+W++P
Sbjct: 428 NCFEDAVYWEMP 439


>gi|156627565 Rh-associated glycoprotein [Homo sapiens]
          Length = 409

 Score =  413 bits (1061), Expect = e-115
 Identities = 215/429 (50%), Positives = 279/429 (65%), Gaps = 26/429 (6%)

Query: 12  RLQLPLLCLFLQGATAVLFAVFVRYNHKTDAALWHRSNHSNADNE--FYFRYPSFQDVHA 69
           R   PL+ + L+ A  VLF +FV Y  +TD  +  + N +   +   F+  YP FQDVH 
Sbjct: 2   RFTFPLMAIVLEIAMIVLFGLFVEY--ETDQTVLEQLNITKPTDMGIFFELYPLFQDVHV 59

Query: 70  MVFVGFGFLMVFLQRYGFSSVGFTFLLAAFALQWSTLVQGFLHSFHGGHIHVGVESMINA 129
           M+FVGFGFLM FL++YGFSSVG   L+AA  LQW T+VQG L S  G   ++G+++MINA
Sbjct: 60  MIFVGFGFLMTFLKKYGFSSVGINLLVAALGLQWGTIVQGILQS-QGQKFNIGIKNMINA 118

Query: 130 DFCAGAVLISFGAVLGKTGPTQLLLMALLEVVLFGINEFVLLHLLGVRDAGGSMTIHTFG 189
           DF A  VLISFGAVLGKT PTQ+L+M +LE+V F  NE+++  +    D G SMTIH FG
Sbjct: 119 DFSAATVLISFGAVLGKTSPTQMLIMTILEIVFFAHNEYLVSEIFKASDIGASMTIHAFG 178

Query: 190 AYFGLVLSRVLYRPQLEKSKHRQGSVYHSDLFAMIGTIFLWIFWPSFNAALTALGAGQHR 249
           AYFGL ++ +LYR  L K    + S Y+SDLFAMIGT+FLW+FWPSFN+A+   G  Q R
Sbjct: 179 AYFGLAVAGILYRSGLRKGHENEESAYYSDLFAMIGTLFLWMFWPSFNSAIAEPGDKQCR 238

Query: 250 TALNTYYSLAASTLGTFALSALVGEDGRLDMVHIQNAALAGGVVVGTSSEMMLTPFGALA 309
             +NTY+SLAA  L  FA S+LV   G+L+MVHIQNA LAGGV VGT ++M + PFG++ 
Sbjct: 239 AIVNTYFSLAACVLTAFAFSSLVEHRGKLNMVHIQNATLAGGVAVGTCADMAIHPFGSMI 298

Query: 310 AGFLAGTVSTLGYKFFTPILESKFKVQDTCGVHNLHGMPGVLGALLGVLVAGLATHEAYG 369
            G +AG VS LGYKF TP+  +K ++ DTCGVHNLHG+PGV+G L G++   +       
Sbjct: 299 IGSIAGMVSVLGYKFLTPLFTTKLRIHDTCGVHNLHGLPGVVGGLAGIVAVAMGA----- 353

Query: 370 DGLESVFPLIAEGQRSATSQAMHQLFGLFVTLMFASVGGGLGGLLLKLPFLDSPPDSQHY 429
                          S TS AM Q   L  ++  A VGG + GL+LKLP    P D   Y
Sbjct: 354 ---------------SNTSMAM-QAAALGSSIGTAVVGGLMTGLILKLPLWGQPSDQNCY 397

Query: 430 EDQVHWQVP 438
           +D V+W+VP
Sbjct: 398 DDSVYWKVP 406


>gi|20336225 Rh blood group D antigen isoform 1 [Homo sapiens]
          Length = 417

 Score =  204 bits (519), Expect = 1e-52
 Identities = 133/424 (31%), Positives = 214/424 (50%), Gaps = 25/424 (5%)

Query: 15  LPLLCLFLQGATAVLFAVFVRYNHKTDAALWHRSNHSNADNEFYFRYPSFQDVHAMVFVG 74
           LPL  L L+ A  +LF  F  Y    DA+L  +             Y   QD+  M  +G
Sbjct: 13  LPLWALTLEAALILLFYFFTHY----DASLEDQKG-------LVASYQVGQDLTVMAAIG 61

Query: 75  FGFLMVFLQRYGFSSVGFTFLLAAFALQWSTLVQGFLHSFHGGHIHVGVESMINADFCAG 134
            GFL    +R+ +SSV F   + A  +QW+ L+ GFL  F  G + + + S+  A   A 
Sbjct: 62  LGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSIRLATMSAL 121

Query: 135 AVLISFGAVLGKTGPTQLLLMALLEVVLFGINEFVLLHLLGVRDAGGSMTIHTFGAYFGL 194
           +VLIS  AVLGK    QL++M L+EV   G    V+ ++         M I+ F AYFGL
Sbjct: 122 SVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIYVFAAYFGL 181

Query: 195 VLSRVLYRPQLEKSKHRQGSVYHSDLFAMIGTIFLWIFWPSFNAALTALGAGQHRTALNT 254
            ++  L +P  E ++ +  +     L AM+G +FLW+FWPSFN+AL      +     NT
Sbjct: 182 SVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIERKNAVFNT 241

Query: 255 YYSLAASTLGTFALSALVGEDGRLDMVHIQNAALAGGVVVGTSSEMMLTPFGALAAGFLA 314
           YY++A S +   + S+L    G++   ++ +A LAGGV VGTS  ++ +P+ A+  G +A
Sbjct: 242 YYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLVA 301

Query: 315 GTVSTLGYKFFTPILESKFKVQDTCGVHNLHGMPGVLGALLGVLVAGLATHEAYGDGLES 374
           G +S  G K+          +  +  +     + G+LG ++ +++  L T  A G+G+  
Sbjct: 302 GLISVGGAKYLPGCCNRVLGIPHSSIMGYNFSLLGLLGEIIYIVLLVLDTVGA-GNGMIG 360

Query: 375 VFPLIAEGQRSATSQAMHQLFGLFVTLMFASVGGGLGGLLLKLPFLDSPPDSQHYEDQVH 434
              L++ G+             L + ++ A   G L GLLL L    +P ++++++DQV 
Sbjct: 361 FQVLLSIGE-------------LSLAIVIALTSGLLTGLLLNLKIWKAPHEAKYFDDQVF 407

Query: 435 WQVP 438
           W+ P
Sbjct: 408 WKFP 411


>gi|66346664 Rhesus blood group, CcEe antigens isoform 1 [Homo
           sapiens]
          Length = 417

 Score =  197 bits (501), Expect = 2e-50
 Identities = 131/425 (30%), Positives = 209/425 (49%), Gaps = 27/425 (6%)

Query: 15  LPLLCLFLQGATAVLFAVFVRYNHKTDAALWHRSNHSNADNEFYFRYPSFQDVHAMVFVG 74
           LPL  L L+ A  +LF  F  Y    DA+L  +             Y   QD+  M  +G
Sbjct: 13  LPLCALTLEAALILLFYFFTHY----DASLEDQKG-------LVASYQVGQDLTVMAALG 61

Query: 75  FGFLMVFLQRYGFSSVGFTFLLAAFALQWSTLVQGFLHSFHGGHIHVGVESMINADFCAG 134
            GFL    +R+ +SSV F   + A  +QW+ L+ GFL  F  G + + + S+  A   A 
Sbjct: 62  LGFLTSNFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSIRLATMSAM 121

Query: 135 AVLISFGAVLGKTGPTQLLLMALLEVVLFGINEFVLLHLLGVRDAGGSMTIHTFGAYFGL 194
           +VLIS GAVLGK    QL++M L+EV   G    V+ ++            + F AYFGL
Sbjct: 122 SVLISAGAVLGKVNLAQLVVMVLVEVTALGTLRMVISNIFNTDYHMNLRHFYVFAAYFGL 181

Query: 195 VLSRVLYRPQLEKSKHRQGSVYHSDLFAMIGTIFLWIFWPSFNAALTALGAGQHRTALNT 254
            ++  L +P  + ++          L AM+G +FLW+FWPS N+AL      +     NT
Sbjct: 182 TVAWCLPKPLPKGTEDNDQRATIPSLSAMLGALFLWMFWPSVNSALLRSPIQRKNAMFNT 241

Query: 255 YYSLAASTLGTFALSALVGEDGRLDMVHIQNAALAGGVVVGTSSEMMLTPFGALAAGFLA 314
           YY+LA S +   + S+L     ++ M ++ +A LAGGV VGTS  ++ +P+ A+  G +A
Sbjct: 242 YYALAVSVVTAISGSSLAHPQRKISMTYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLVA 301

Query: 315 GTVSTLGYKFFTPILESKFKVQDTCGVHNLHGMPGVLGALLGVLVAGLATHEAY-GDGLE 373
           G +S  G K           +     +H++  + G+LG +  +++  L  H  + G+G+ 
Sbjct: 302 GLISIGGAKCLPVCCNRVLGIHHISVMHSIFSLLGLLGEITYIVL--LVLHTVWNGNGMI 359

Query: 374 SVFPLIAEGQRSATSQAMHQLFGLFVTLMFASVGGGLGGLLLKLPFLDSPPDSQHYEDQV 433
               L++ G+             L + ++ A   G L GLLL L    +P  +++++DQV
Sbjct: 360 GFQVLLSIGE-------------LSLAIVIALTSGLLTGLLLNLKIWKAPHVAKYFDDQV 406

Query: 434 HWQVP 438
            W+ P
Sbjct: 407 FWKFP 411


>gi|189095266 Rh blood group D antigen isoform 2 [Homo sapiens]
          Length = 321

 Score =  179 bits (455), Expect = 4e-45
 Identities = 108/310 (34%), Positives = 163/310 (52%), Gaps = 11/310 (3%)

Query: 15  LPLLCLFLQGATAVLFAVFVRYNHKTDAALWHRSNHSNADNEFYFRYPSFQDVHAMVFVG 74
           LPL  L L+ A  +LF  F  Y    DA+L  +             Y   QD+  M  +G
Sbjct: 13  LPLWALTLEAALILLFYFFTHY----DASLEDQKG-------LVASYQVGQDLTVMAAIG 61

Query: 75  FGFLMVFLQRYGFSSVGFTFLLAAFALQWSTLVQGFLHSFHGGHIHVGVESMINADFCAG 134
            GFL    +R+ +SSV F   + A  +QW+ L+ GFL  F  G + + + S+  A   A 
Sbjct: 62  LGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSIRLATMSAL 121

Query: 135 AVLISFGAVLGKTGPTQLLLMALLEVVLFGINEFVLLHLLGVRDAGGSMTIHTFGAYFGL 194
           +VLIS  AVLGK    QL++M L+EV   G    V+ ++         M I+ F AYFGL
Sbjct: 122 SVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIYVFAAYFGL 181

Query: 195 VLSRVLYRPQLEKSKHRQGSVYHSDLFAMIGTIFLWIFWPSFNAALTALGAGQHRTALNT 254
            ++  L +P  E ++ +  +     L AM+G +FLW+FWPSFN+AL      +     NT
Sbjct: 182 SVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIERKNAVFNT 241

Query: 255 YYSLAASTLGTFALSALVGEDGRLDMVHIQNAALAGGVVVGTSSEMMLTPFGALAAGFLA 314
           YY++A S +   + S+L    G++   ++ +A LAGGV VGTS  ++ +P+ A+  G +A
Sbjct: 242 YYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLVA 301

Query: 315 GTVSTLGYKF 324
           G +S  G K+
Sbjct: 302 GLISVGGAKY 311


>gi|66346670 Rhesus blood group, CcEe antigens isoform 2 [Homo
           sapiens]
          Length = 354

 Score =  171 bits (432), Expect = 2e-42
 Identities = 106/309 (34%), Positives = 158/309 (51%), Gaps = 11/309 (3%)

Query: 15  LPLLCLFLQGATAVLFAVFVRYNHKTDAALWHRSNHSNADNEFYFRYPSFQDVHAMVFVG 74
           LPL  L L+ A  +LF  F  Y    DA+L  +             Y   QD+  M  +G
Sbjct: 13  LPLCALTLEAALILLFYFFTHY----DASLEDQKG-------LVASYQVGQDLTVMAALG 61

Query: 75  FGFLMVFLQRYGFSSVGFTFLLAAFALQWSTLVQGFLHSFHGGHIHVGVESMINADFCAG 134
            GFL    +R+ +SSV F   + A  +QW+ L+ GFL  F  G + + + S+  A   A 
Sbjct: 62  LGFLTSNFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSIRLATMSAM 121

Query: 135 AVLISFGAVLGKTGPTQLLLMALLEVVLFGINEFVLLHLLGVRDAGGSMTIHTFGAYFGL 194
           +VLIS GAVLGK    QL++M L+EV   G    V+ ++            + F AYFGL
Sbjct: 122 SVLISAGAVLGKVNLAQLVVMVLVEVTALGTLRMVISNIFNTDYHMNLRHFYVFAAYFGL 181

Query: 195 VLSRVLYRPQLEKSKHRQGSVYHSDLFAMIGTIFLWIFWPSFNAALTALGAGQHRTALNT 254
            ++  L +P  + ++          L AM+G +FLW+FWPS N+AL      +     NT
Sbjct: 182 TVAWCLPKPLPKGTEDNDQRATIPSLSAMLGALFLWMFWPSVNSALLRSPIQRKNAMFNT 241

Query: 255 YYSLAASTLGTFALSALVGEDGRLDMVHIQNAALAGGVVVGTSSEMMLTPFGALAAGFLA 314
           YY+LA S +   + S+L     ++ M ++ +A LAGGV VGTS  ++ +P+ A+  G +A
Sbjct: 242 YYALAVSVVTAISGSSLAHPQRKISMTYVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLVA 301

Query: 315 GTVSTLGYK 323
           G +S  G K
Sbjct: 302 GLISIGGAK 310


>gi|66346666 Rhesus blood group, CcEe antigens isoform 3 [Homo
           sapiens]
          Length = 266

 Score = 85.9 bits (211), Expect = 7e-17
 Identities = 57/162 (35%), Positives = 81/162 (50%), Gaps = 11/162 (6%)

Query: 15  LPLLCLFLQGATAVLFAVFVRYNHKTDAALWHRSNHSNADNEFYFRYPSFQDVHAMVFVG 74
           LPL  L L+ A  +LF  F  Y    DA+L  +             Y   QD+  M  +G
Sbjct: 13  LPLCALTLEAALILLFYFFTHY----DASLEDQKG-------LVASYQVGQDLTVMAALG 61

Query: 75  FGFLMVFLQRYGFSSVGFTFLLAAFALQWSTLVQGFLHSFHGGHIHVGVESMINADFCAG 134
            GFL    +R+ +SSV F   + A  +QW+ L+ GFL  F  G + + + S+  A   A 
Sbjct: 62  LGFLTSNFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSIRLATMSAM 121

Query: 135 AVLISFGAVLGKTGPTQLLLMALLEVVLFGINEFVLLHLLGV 176
           +VLIS GAVLGK    QL++M L+EV   G    V+ ++  V
Sbjct: 122 SVLISAGAVLGKVNLAQLVVMVLVEVTALGTLRMVISNIFNV 163



 Score = 38.5 bits (88), Expect = 0.013
 Identities = 35/163 (21%), Positives = 70/163 (42%), Gaps = 17/163 (10%)

Query: 277 RLDMVHIQNAALAGGVVVGTSSEMMLTPFGALAAGFLAGTVSTLGYKFFTPILESKFKVQ 336
           RL  +   +  ++ G V+G  +   L     +    L GT+  +    F         + 
Sbjct: 114 RLATMSAMSVLISAGAVLGKVNLAQLVVMVLVEVTAL-GTLRMVISNIFNVCCNRVLGIH 172

Query: 337 DTCGVHNLHGMPGVLGALLGVLVAGLATHEAY-GDGLESVFPLIAEGQRSATSQAMHQLF 395
               +H++  + G+LG +  +++  L  H  + G+G+     L++ G+ S          
Sbjct: 173 HISVMHSIFSLLGLLGEITYIVL--LVLHTVWNGNGMIGFQVLLSIGELS---------- 220

Query: 396 GLFVTLMFASVGGGLGGLLLKLPFLDSPPDSQHYEDQVHWQVP 438
              + ++ A   G L GLLL L    +P  +++++DQV W+ P
Sbjct: 221 ---LAIVIALTSGLLTGLLLNLKIWKAPHVAKYFDDQVFWKFP 260


>gi|66346668 Rhesus blood group, CcEe antigens isoform 4 [Homo
           sapiens]
          Length = 267

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 56/159 (35%), Positives = 80/159 (50%), Gaps = 11/159 (6%)

Query: 15  LPLLCLFLQGATAVLFAVFVRYNHKTDAALWHRSNHSNADNEFYFRYPSFQDVHAMVFVG 74
           LPL  L L+ A  +LF  F  Y    DA+L  +             Y   QD+  M  +G
Sbjct: 13  LPLCALTLEAALILLFYFFTHY----DASLEDQKG-------LVASYQVGQDLTVMAALG 61

Query: 75  FGFLMVFLQRYGFSSVGFTFLLAAFALQWSTLVQGFLHSFHGGHIHVGVESMINADFCAG 134
            GFL    +R+ +SSV F   + A  +QW+ L+ GFL  F  G + + + S+  A   A 
Sbjct: 62  LGFLTSNFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSIRLATMSAM 121

Query: 135 AVLISFGAVLGKTGPTQLLLMALLEVVLFGINEFVLLHL 173
           +VLIS GAVLGK    QL++M L+EV   G    V+ ++
Sbjct: 122 SVLISAGAVLGKVNLAQLVVMVLVEVTALGTLRMVISNI 160



 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 24/83 (28%), Positives = 44/83 (53%)

Query: 282 HIQNAALAGGVVVGTSSEMMLTPFGALAAGFLAGTVSTLGYKFFTPILESKFKVQDTCGV 341
           ++ +A LAGGV VGTS  ++ +P+ A+  G +AG +S  G K           +     +
Sbjct: 164 YVHSAVLAGGVAVGTSCHLIPSPWLAMVLGLVAGLISIGGAKCLPVCCNRVLGIHHISVM 223

Query: 342 HNLHGMPGVLGALLGVLVAGLAT 364
           H++  + G+LG +  +++  L T
Sbjct: 224 HSIFSLLGLLGEITYIVLLVLHT 246


>gi|21361959 solute carrier family 35, member F5 [Homo sapiens]
          Length = 523

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 2/104 (1%)

Query: 133 AGAVLISFGAVLGKTGPTQLLLMALLEVVLFGINEFVLLHLLGVRDAGGSMTIHTFGAYF 192
           +G   +   AV       +  L  LL V+L  I   VL++L G     G  T+ +  +  
Sbjct: 277 SGLFTLILAAVFPSNSGDRFTLSKLLAVIL-SIGGVVLVNLAGSEKPAGRDTVGSIWSLA 335

Query: 193 GLVLSRVLYRPQLEKSKHRQGSVYHSDLFAMIGTIFLWIFWPSF 236
           G +L  V Y   +++   R+  +     F  +G   L + WP F
Sbjct: 336 GAMLYAV-YIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGF 378


>gi|116812579 transmembrane BAX inhibitor motif containing 4 [Homo
           sapiens]
          Length = 238

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 16/171 (9%)

Query: 17  LLCLFLQGATAVLFAVFVRYNHKTDAALWHRSNHSNADNEFYFRYPSFQDVHAMV----- 71
           L+ LF  G+  ++FA+ +   HK    L+     +  +        +F DV+ ++     
Sbjct: 72  LILLFALGSLGLIFALILN-RHKYPLNLYLLFGFTLLEALTVAVVVTFYDVYIILQAFIL 130

Query: 72  --FVGFGFLMVFLQ-RYGFSSVGFTFLLAAFALQWSTLVQGFLHSFHGGHIHVGVESMIN 128
              V FG  +  LQ +  FS  G       FAL W   + GFL  F    I   V +   
Sbjct: 131 TTTVFFGLTVYTLQSKKDFSKFG----AGLFALLWILCLSGFLKFFFYSEIMELVLAAAG 186

Query: 129 ADFCAGAVLISFGAVLGKTGPTQLLLMALLEVVLFGINEFVLLHLLGVRDA 179
           A    G ++    +++ K  P + +L A + + L  IN F  LHLL   +A
Sbjct: 187 ALLFCGFIIYDTHSLMHKLSPEEYVL-AAISLYLDIINLF--LHLLRFLEA 234


>gi|38372901 Sp1 transcription factor isoform a [Homo sapiens]
          Length = 785

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 7/105 (6%)

Query: 291 GVVVG--TSSEMMLTPFGALAAGFLAGTVSTLGYKFFT-PILES-KFKVQDTCG--VHNL 344
           GV +G  +SS   LTP  A AA   AGTV+    +  + P L++       T G  VH +
Sbjct: 489 GVSLGQTSSSNTTLTPI-ASAASIPAGTVTVNAAQLSSMPGLQTINLSALGTSGIQVHPI 547

Query: 345 HGMPGVLGALLGVLVAGLATHEAYGDGLESVFPLIAEGQRSATSQ 389
            G+P  +    G   A L  H A GDG+        EG+ S  +Q
Sbjct: 548 QGLPLAIANAPGDHGAQLGLHGAGGDGIHDDTAGGEEGENSPDAQ 592


>gi|218751903 Sp1 transcription factor isoform b [Homo sapiens]
          Length = 778

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 7/105 (6%)

Query: 291 GVVVG--TSSEMMLTPFGALAAGFLAGTVSTLGYKFFT-PILES-KFKVQDTCG--VHNL 344
           GV +G  +SS   LTP  A AA   AGTV+    +  + P L++       T G  VH +
Sbjct: 482 GVSLGQTSSSNTTLTPI-ASAASIPAGTVTVNAAQLSSMPGLQTINLSALGTSGIQVHPI 540

Query: 345 HGMPGVLGALLGVLVAGLATHEAYGDGLESVFPLIAEGQRSATSQ 389
            G+P  +    G   A L  H A GDG+        EG+ S  +Q
Sbjct: 541 QGLPLAIANAPGDHGAQLGLHGAGGDGIHDDTAGGEEGENSPDAQ 585


>gi|59797060 arylsulfatase family, member I [Homo sapiens]
          Length = 569

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 315 GTVSTLGYKFFTPILESKFKVQDTCGVHNLHGMPGVLGALLGVLVAGLATHEAYGDGLES 374
           G V  LG+   +P+L+ K +      +H     P ++G      +AG  T  A G     
Sbjct: 321 GGVRGLGF-VHSPLLKRKQRTSRAL-MHITDWYPTLVG------LAGGTTSAADGLDGYD 372

Query: 375 VFPLIAEGQRSATSQAMHQLFGLFVTLMFASVGGGLG 411
           V+P I+EG+ S  ++ +H +  L+      S+ GG G
Sbjct: 373 VWPAISEGRASPRTEILHNIDPLYNHAQHGSLEGGFG 409


>gi|41872646 cullin 7 [Homo sapiens]
          Length = 1698

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 393  QLFGLFVTLMFASVGGGLGGLLLKLPFLDSPPDSQHYEDQVHWQVPGEHEDKAQRPLRVE 452
            +LFG     + A +  G  G LLKLPFL +   S+ +   +  Q+ G     AQ   R+ 
Sbjct: 1185 ELFGPRAAFLLA-LQNGCAGALLKLPFLKAAHVSEQFARHIDQQIQGSRIGGAQEMERLA 1243

Query: 453  E 453
            +
Sbjct: 1244 Q 1244


>gi|4507161 SRY-box 11 [Homo sapiens]
          Length = 441

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 14/49 (28%), Positives = 25/49 (51%)

Query: 400 TLMFASVGGGLGGLLLKLPFLDSPPDSQHYEDQVHWQVPGEHEDKAQRP 448
           +L  +  GGG  G  +K  FLD   D    +D++  Q+  E +++ + P
Sbjct: 202 SLRVSGSGGGGAGKTVKCVFLDEDDDDDDDDDELQLQIKQEPDEEDEEP 250


>gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]
          Length = 457

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 20/115 (17%)

Query: 234 PSFNAALTALGAGQHRTALNTYYSLAASTLGTFA---------LSALVG----------E 274
           P   ++++ + AG     +NTY S++A+ +G+ +         +S+ VG           
Sbjct: 22  PEGYSSVSNMNAGLGMNGMNTYMSMSAAAMGSGSGNMSAGSMNMSSYVGAGMSPSLAGMS 81

Query: 275 DGRLDMVHIQNAALAGGVV-VGTSSEMMLTPFGALAAGFLAGTVSTLGYKFFTPI 328
            G   M  +  +A A GV  +G      L+P G  AAG + G          +P+
Sbjct: 82  PGAGAMAGMGGSAGAAGVAGMGPHLSPSLSPLGGQAAGAMGGLAPYANMNSMSPM 136


>gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]
          Length = 463

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 20/115 (17%)

Query: 234 PSFNAALTALGAGQHRTALNTYYSLAASTLGTFA---------LSALVG----------E 274
           P   ++++ + AG     +NTY S++A+ +G+ +         +S+ VG           
Sbjct: 28  PEGYSSVSNMNAGLGMNGMNTYMSMSAAAMGSGSGNMSAGSMNMSSYVGAGMSPSLAGMS 87

Query: 275 DGRLDMVHIQNAALAGGVV-VGTSSEMMLTPFGALAAGFLAGTVSTLGYKFFTPI 328
            G   M  +  +A A GV  +G      L+P G  AAG + G          +P+
Sbjct: 88  PGAGAMAGMGGSAGAAGVAGMGPHLSPSLSPLGGQAAGAMGGLAPYANMNSMSPM 142


>gi|203098995 solute carrier family 2 (facilitated glucose
           transporter), member 13 [Homo sapiens]
          Length = 648

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 4/78 (5%)

Query: 330 ESKFKVQDTCGVHNLHGMPGVLGALLGVLVAGLATHEAYG----DGLESVFPLIAEGQRS 385
           E+KFK +D    +N    P    ALLG+++  +      G         ++PL A    +
Sbjct: 486 ETKFKTEDIFWAYNFCPTPYSWTALLGLILYLVFFAPGMGPMPWTVNSEIYPLWARSTGN 545

Query: 386 ATSQAMHQLFGLFVTLMF 403
           A S  ++ +F + V+L F
Sbjct: 546 ACSSGINWIFNVLVSLTF 563


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.140    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,021,453
Number of Sequences: 37866
Number of extensions: 647047
Number of successful extensions: 1616
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1586
Number of HSP's gapped (non-prelim): 22
length of query: 458
length of database: 18,247,518
effective HSP length: 106
effective length of query: 352
effective length of database: 14,233,722
effective search space: 5010270144
effective search space used: 5010270144
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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