Guide to the Human Genome
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Name: AMDHD1 Sequence: fasta or formatted (426aa) NCBI GI: 223972677
Description:

amidohydrolase domain containing 1

Referenced in:

Amino Acid Catabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6         45           3
 C cysteine            2.3         10           1
 D aspartate           4.5         19           2
 E glutamate           8.0         34           3
 F phenylalanine       3.1         13           1
 G glycine             8.9         38           3
 H histidine           4.2         18           2
 I isoleucine          7.0         30           3
 K lysine              4.7         20           1
 L leucine            10.6         45           3
 M methionine          3.8         16           2
 N asparagine          2.6         11           2
 P proline             2.6         11           1
 Q glutamine           3.5         15           2
 R arginine            5.9         25           2
 S serine              4.9         21           2
 T threonine           4.5         19           2
 V valine              5.9         25           2
 W tryptophan          0.5          2           1
 Y tyrosine            2.1          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   amidohydrolase domain containing 1 
GDA                   0.015   guanine deaminase 
DPYS                  0.010   dihydropyrimidinase 
NRARP                 0.009   NOTCH-regulated ankyrin repeat protein 
MYH8                  0.009   myosin, heavy chain 8, skeletal muscle, perinatal [...
GTF2IRD2              0.007   GTF2I repeat domain containing 2 
IMPG2                 0.007   interphotoreceptor matrix proteoglycan 2 
DPYSL3                0.007   dihydropyrimidinase-like 3 
CHRDL1                0.006   chordin-like 1 isoform 3 precursor 
CHRDL1                0.006   chordin-like 1 isoform 2 precursor 
PRKAR1B               0.005   protein kinase, cAMP-dependent, regulatory, type I, ...
MCF2L2                0.005   Rho family guanine-nucleotide exchange factor 
FLJ44817              0.005   similar to pleckstrin homology domain protein (5V32...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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