Guide to the Human Genome
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Name: GDA Sequence: fasta or formatted (454aa) NCBI GI: 4758426
Description:

guanine deaminase

Referenced in:

Purine Biosynthesis and Catabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         27           2
 C cysteine            2.0          9           1
 D aspartate           5.1         23           2
 E glutamate           8.1         37           2
 F phenylalanine       5.7         26           2
 G glycine             6.2         28           2
 H histidine           3.3         15           2
 I isoleucine          5.5         25           1
 K lysine              5.7         26           1
 L leucine            10.1         46           3
 M methionine          2.2         10           1
 N asparagine          4.6         21           2
 P proline             3.3         15           2
 Q glutamine           2.4         11           2
 R arginine            4.0         18           2
 S serine              8.4         38           3
 T threonine           5.9         27           3
 V valine              7.3         33           2
 W tryptophan          0.7          3           1
 Y tyrosine            3.5         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanine deaminase 
AMDHD1                0.014   amidohydrolase domain containing 1 
SETD2                 0.012   SET domain containing 2 
ZNF407                0.007   zinc finger protein 407 isoform 3 
ZNF407                0.007   zinc finger protein 407 isoform 2 
ZNF407                0.007   zinc finger protein 407 isoform 1 
JAK1                  0.006   janus kinase 1 
CACNA2D3              0.006   calcium channel, voltage-dependent, alpha 2/delta 3 ...
WWC3                  0.006   WWC family member 3 
DNAH17                0.005   PREDICTED: dynein, axonemal, heavy chain 17 
DNAH17                0.005   PREDICTED: dynein, axonemal, heavy chain 17 
DNAH17                0.005   PREDICTED: dynein, axonemal, heavy chain 17 
PIK3C2A               0.005   phosphoinositide-3-kinase, class 2 alpha polypeptid...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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