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Name: PTPN20B Sequence: fasta or formatted (411aa) NCBI GI: 108802607
Description:

protein tyrosine phosphatase, non-receptor type 20 isoform 3

Referenced in:

Protein Tyrosine Phosphatases

Other entries for this name:
alt prot [420aa] protein tyrosine phosphatase, non-receptor type 20 isoform 1
alt prot [269aa] protein tyrosine phosphatase, non-receptor type 20 isoform 4
alt prot [228aa] protein tyrosine phosphatase, non-receptor type 20 isoform 5
alt prot [217aa] protein tyrosine phosphatase, non-receptor type 20 isoform 6
alt prot [136aa] protein tyrosine phosphatase, non-receptor type 20 isoform 7
alt prot [339aa] protein tyrosine phosphatase, non-receptor type 20 isoform 8
alt prot [145aa] protein tyrosine phosphatase, non-receptor type 20 isoform 9
alt prot [64aa] protein tyrosine phosphatase, non-receptor type 20 isoform 10
alt prot [226aa] protein tyrosine phosphatase, non-receptor type 20 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         19           2
 C cysteine            1.9          8           1
 D aspartate           5.6         23           2
 E glutamate           8.3         34           2
 F phenylalanine       5.1         21           1
 G glycine             4.6         19           2
 H histidine           2.2          9           1
 I isoleucine          7.1         29           2
 K lysine              5.8         24           2
 L leucine             8.0         33           2
 M methionine          2.7         11           1
 N asparagine          5.4         22           2
 P proline             4.6         19           1
 Q glutamine           4.4         18           1
 R arginine            5.6         23           2
 S serine              8.3         34           3
 T threonine           4.4         18           1
 V valine              6.1         25           2
 W tryptophan          1.2          5           1
 Y tyrosine            4.1         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein tyrosine phosphatase, non-receptor type 20 ... 
PTPN20A               1.000   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20A               0.995   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20B               0.995   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20A               0.821   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20B               0.821   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20B               0.539   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20A               0.539   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20A               0.432   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20B               0.432   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20A               0.429   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20B               0.429   protein tyrosine phosphatase, non-receptor type 20 i...
PTPN20B               0.356   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20A               0.356   protein tyrosine phosphatase, non-receptor type 20A...
PTPN13                0.264   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.264   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.264   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.264   protein tyrosine phosphatase, non-receptor type 13 is...
PTPN20A               0.255   protein tyrosine phosphatase, non-receptor type 20A...
PTPN20B               0.255   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20B               0.233   protein tyrosine phosphatase, non-receptor type 20 ...
PTPN20A               0.233   protein tyrosine phosphatase, non-receptor type 20A...
PTPRS                 0.201   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.201   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.201   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.201   protein tyrosine phosphatase, receptor type, sigma ...
PTPN3                 0.197   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.197   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.197   protein tyrosine phosphatase, non-receptor type 3 i...
PTPN3                 0.197   protein tyrosine phosphatase, non-receptor type 3 i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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