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Search of human proteins with 22219469
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22219469 testes development-related NYD-SP22 isoform 2 [Homo
sapiens]
(127 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21362074 testes development-related NYD-SP22 isoform 1 [Homo ... 278 8e-76
gi|22219469 testes development-related NYD-SP22 isoform 2 [Homo ... 278 8e-76
gi|22219471 testes development-related NYD-SP22 isoform 3 [Homo ... 110 3e-25
gi|4809284 interferon regulatory factor 7 isoform b [Homo sapiens] 29 1.1
gi|56237021 fibrillin 3 precursor [Homo sapiens] 28 1.5
gi|209571521 cysteine rich BMP regulator 2 isoform 2 [Homo sapiens] 28 1.5
gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens] 27 3.2
gi|39780552 Vac14 homolog [Homo sapiens] 27 3.2
gi|38348348 TBC1 domain family, member 10C [Homo sapiens] 27 5.5
gi|154426292 arachidonate 12-lipoxygenase [Homo sapiens] 26 7.2
gi|42766424 hypothetical protein LOC389119 [Homo sapiens] 26 7.2
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 26 7.2
gi|116268109 nucleotide-binding oligomerization domains 27 [Homo... 26 7.2
gi|187960042 selectin E precursor [Homo sapiens] 26 9.4
gi|4502285 ATPase, Ca++ transporting, slow twitch 2 isoform 2 [H... 26 9.4
gi|24638454 ATPase, Ca++ transporting, slow twitch 2 isoform 1 [... 26 9.4
gi|209413709 ATPase, Ca++ transporting, slow twitch 2 isoform 3 ... 26 9.4
gi|7662176 ProSAPiP1 protein [Homo sapiens] 26 9.4
gi|10835220 ATPase, Ca++ transporting, fast twitch 1 isoform b [... 26 9.4
gi|27886529 ATPase, Ca++ transporting, fast twitch 1 isoform a [... 26 9.4
gi|19923949 kinesin family member 12 [Homo sapiens] 26 9.4
>gi|21362074 testes development-related NYD-SP22 isoform 1 [Homo
sapiens]
Length = 262
Score = 278 bits (711), Expect = 8e-76
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 METAVRGMPLECPPRPERLNAYEREVMVNMLNSLSRNQQLPRITPRCGCVDPLPGRLPFH 60
METAVRGMPLECPPRPERLNAYEREVMVNMLNSLSRNQQLPRITPRCGCVDPLPGRLPFH
Sbjct: 136 METAVRGMPLECPPRPERLNAYEREVMVNMLNSLSRNQQLPRITPRCGCVDPLPGRLPFH 195
Query: 61 GYESACSGRHYCLRGMDYYASGAPCTDRRLRPWCREQPTMCTSLRAPARNAVCCYNSPAV 120
GYESACSGRHYCLRGMDYYASGAPCTDRRLRPWCREQPTMCTSLRAPARNAVCCYNSPAV
Sbjct: 196 GYESACSGRHYCLRGMDYYASGAPCTDRRLRPWCREQPTMCTSLRAPARNAVCCYNSPAV 255
Query: 121 ILPISEP 127
ILPISEP
Sbjct: 256 ILPISEP 262
>gi|22219469 testes development-related NYD-SP22 isoform 2 [Homo
sapiens]
Length = 127
Score = 278 bits (711), Expect = 8e-76
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 METAVRGMPLECPPRPERLNAYEREVMVNMLNSLSRNQQLPRITPRCGCVDPLPGRLPFH 60
METAVRGMPLECPPRPERLNAYEREVMVNMLNSLSRNQQLPRITPRCGCVDPLPGRLPFH
Sbjct: 1 METAVRGMPLECPPRPERLNAYEREVMVNMLNSLSRNQQLPRITPRCGCVDPLPGRLPFH 60
Query: 61 GYESACSGRHYCLRGMDYYASGAPCTDRRLRPWCREQPTMCTSLRAPARNAVCCYNSPAV 120
GYESACSGRHYCLRGMDYYASGAPCTDRRLRPWCREQPTMCTSLRAPARNAVCCYNSPAV
Sbjct: 61 GYESACSGRHYCLRGMDYYASGAPCTDRRLRPWCREQPTMCTSLRAPARNAVCCYNSPAV 120
Query: 121 ILPISEP 127
ILPISEP
Sbjct: 121 ILPISEP 127
>gi|22219471 testes development-related NYD-SP22 isoform 3 [Homo
sapiens]
Length = 111
Score = 110 bits (275), Expect = 3e-25
Identities = 52/56 (92%), Positives = 52/56 (92%)
Query: 1 METAVRGMPLECPPRPERLNAYEREVMVNMLNSLSRNQQLPRITPRCGCVDPLPGR 56
METAVRGMPLECPPRPERLNAYEREVMVNMLNSLSRNQQLPRITPRCGCV P R
Sbjct: 1 METAVRGMPLECPPRPERLNAYEREVMVNMLNSLSRNQQLPRITPRCGCVPPYEHR 56
>gi|4809284 interferon regulatory factor 7 isoform b [Homo sapiens]
Length = 474
Score = 28.9 bits (63), Expect = 1.1
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 15/67 (22%)
Query: 51 DPLPGRLPFHGYES-----ACSGRHYCLRGMDYYASGAPCTDRRLRPWCREQPTMCTSLR 105
DP+P + P G E AC+G + AP + + P+ P+ CT+++
Sbjct: 204 DPVPTKAPGEGQEGLPLTGACAGGE----------AAAPESPHQAEPYLSPSPSACTAVQ 253
Query: 106 APARNAV 112
P+ A+
Sbjct: 254 EPSPGAL 260
>gi|56237021 fibrillin 3 precursor [Homo sapiens]
Length = 2809
Score = 28.5 bits (62), Expect = 1.5
Identities = 34/120 (28%), Positives = 46/120 (38%), Gaps = 16/120 (13%)
Query: 4 AVRGMPLE-CPPRPERLNAYEREVMVNMLNSLSRNQQLPRITPRCGCVDPLPGRLPFHGY 62
A G P E C P + R V + ++ + P + P CV+
Sbjct: 840 AAWGSPCERCEIDPACARGFARMTGVTC-DDVNECESFPGVCPNGRCVN----------- 887
Query: 63 ESACSGRHYCLRGMDYYASGAPCTDRRLRP-WCREQPTMC-TSLRAPARNAVCCYNSPAV 120
+A S R C G+ ASG C D RL P + R C +L R VCC + AV
Sbjct: 888 -TAGSFRCECPEGLMLDASGRLCVDVRLEPCFLRWDEDECGVTLPGKYRMDVCCCSIGAV 946
>gi|209571521 cysteine rich BMP regulator 2 isoform 2 [Homo sapiens]
Length = 814
Score = 28.5 bits (62), Expect = 1.5
Identities = 32/102 (31%), Positives = 34/102 (33%), Gaps = 26/102 (25%)
Query: 41 PRITPRCGCVDPLPGRLPFHGYESACSGRHYCLRGMDYYASGA-------PCTDRRLRPW 93
PR PR C PLPG + CSG C G Y SGA PC R
Sbjct: 576 PRPCPRAPCAHPLPGTC----CPNDCSG---CAFGGKEYPSGADFPHPSDPCRLCR---- 624
Query: 94 CREQPTMCTSLRA---PARNAV-----CCYNSPAVILPISEP 127
C C + R P V CC PA P P
Sbjct: 625 CLSGNVQCLARRCVPLPCPEPVLLPGECCPQCPAAPAPAGCP 666
>gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens]
Length = 1503
Score = 27.3 bits (59), Expect = 3.2
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 7/43 (16%)
Query: 41 PRITPRCGCVDPLPGRLPFHGYESACSGRHYCLRGMDYYASGA 83
PR PR C PLPG + CSG C G Y SGA
Sbjct: 518 PRPCPRAPCAHPLPGTC----CPNDCSG---CAFGGKEYPSGA 553
>gi|39780552 Vac14 homolog [Homo sapiens]
Length = 782
Score = 27.3 bits (59), Expect = 3.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 10 LECPPRPERLNAYEREVMVNMLNSLSRNQQL 40
LEC P +N+Y + M+N+L S ++L
Sbjct: 514 LECSPSTPTMNSYFYKFMINLLKRFSSERKL 544
>gi|38348348 TBC1 domain family, member 10C [Homo sapiens]
Length = 446
Score = 26.6 bits (57), Expect = 5.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 3 TAVRGMPLECPPRPER 18
T RG P+E PPRP+R
Sbjct: 421 TRARGPPIEGPPRPQR 436
>gi|154426292 arachidonate 12-lipoxygenase [Homo sapiens]
Length = 663
Score = 26.2 bits (56), Expect = 7.2
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 66 CSGRHYCLRG--MDYYA--SGAPCTDRRLRPWCREQPTMCT 102
C+ +H + +D+YA APCT R P +E TM T
Sbjct: 536 CTAQHAAINQGQLDWYAWVPNAPCTMRMPPPTTKEDVTMAT 576
>gi|42766424 hypothetical protein LOC389119 [Homo sapiens]
Length = 287
Score = 26.2 bits (56), Expect = 7.2
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 3 TAVRGMPLECPPRPE 17
TA+ G L CPPRPE
Sbjct: 243 TAMAGKRLSCPPRPE 257
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 26.2 bits (56), Expect = 7.2
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 3 TAVRGMPLECPPRPERLNAYEREV--MVNMLNSLSRNQQLPRITPRCGCVDPLPGRLPFH 60
T+V PL+ PP+ ER A E M L+S S Q+LP P P+P P H
Sbjct: 594 TSVTFSPLKSPPQLEREMASPPECSEMPLDLSSKSNRQKLP--LPNQRKTPPMPVLTPVH 651
>gi|116268109 nucleotide-binding oligomerization domains 27 [Homo
sapiens]
Length = 1866
Score = 26.2 bits (56), Expect = 7.2
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 14/59 (23%)
Query: 23 EREVMVNMLNSLS-RNQQLPRITPRCGCVDP-------------LPGRLPFHGYESACS 67
++ +V +L L+ R P++ C CVD LP +LPFH + C+
Sbjct: 591 KQAAVVQVLKKLATRKLTGPKVVELCHCVDETQEPELASLTAQSLPYQLPFHNFPLTCT 649
>gi|187960042 selectin E precursor [Homo sapiens]
Length = 610
Score = 25.8 bits (55), Expect = 9.4
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Query: 93 WCREQPTM----CTSLRAPARNAVCCYNSPA 119
W E+PT C ++R P +V C +SPA
Sbjct: 292 WDNEKPTCKAVTCRAVRQPQNGSVRCSHSPA 322
>gi|4502285 ATPase, Ca++ transporting, slow twitch 2 isoform 2 [Homo
sapiens]
Length = 997
Score = 25.8 bits (55), Expect = 9.4
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 27 MVNMLNSLSRNQQLPRITP 45
M N LNSLS NQ L R+ P
Sbjct: 908 MCNALNSLSENQSLLRMPP 926
>gi|24638454 ATPase, Ca++ transporting, slow twitch 2 isoform 1
[Homo sapiens]
Length = 1042
Score = 25.8 bits (55), Expect = 9.4
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 27 MVNMLNSLSRNQQLPRITP 45
M N LNSLS NQ L R+ P
Sbjct: 908 MCNALNSLSENQSLLRMPP 926
>gi|209413709 ATPase, Ca++ transporting, slow twitch 2 isoform 3
[Homo sapiens]
Length = 1015
Score = 25.8 bits (55), Expect = 9.4
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 27 MVNMLNSLSRNQQLPRITP 45
M N LNSLS NQ L R+ P
Sbjct: 881 MCNALNSLSENQSLLRMPP 899
>gi|7662176 ProSAPiP1 protein [Homo sapiens]
Length = 673
Score = 25.8 bits (55), Expect = 9.4
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 17 ERLNAYEREVMVNMLNSLSRNQQLPRITPRCGCVDPLPGRLPFHGYE 63
E++ Y++++ ++ + RNQQL R G P HG E
Sbjct: 610 EKVIEYQKQLQLSYVEMYQRNQQLERRLRERGAAGGASTPTPQHGEE 656
>gi|10835220 ATPase, Ca++ transporting, fast twitch 1 isoform b
[Homo sapiens]
Length = 994
Score = 25.8 bits (55), Expect = 9.4
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 27 MVNMLNSLSRNQQLPRITP 45
M N LNSLS NQ L R+ P
Sbjct: 909 MCNALNSLSENQSLLRMPP 927
>gi|27886529 ATPase, Ca++ transporting, fast twitch 1 isoform a
[Homo sapiens]
Length = 1001
Score = 25.8 bits (55), Expect = 9.4
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 27 MVNMLNSLSRNQQLPRITP 45
M N LNSLS NQ L R+ P
Sbjct: 909 MCNALNSLSENQSLLRMPP 927
>gi|19923949 kinesin family member 12 [Homo sapiens]
Length = 513
Score = 25.8 bits (55), Expect = 9.4
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 29/99 (29%)
Query: 17 ERLNAYEREVMVNMLNSLSRNQQLPRITPRCGC-VDPLPGRLPFHG----YESAC----- 66
++++A ER +L++ +QQ P +TP C C + P P P H Y C
Sbjct: 322 QQVHALERR----LLSACYHHQQGPGLTPPCPCLMAPAP---PCHALPPLYSCPCCHICP 374
Query: 67 ------------SGRHYCLRGMDYYASGAPCTDRRLRPW 93
G H+ + +D ASG R PW
Sbjct: 375 LCRVPLAHWACLPGEHHLPQVLDPEASGGRPPSARPPPW 413
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.138 0.469
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,141,416
Number of Sequences: 37866
Number of extensions: 291015
Number of successful extensions: 757
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 741
Number of HSP's gapped (non-prelim): 25
length of query: 127
length of database: 18,247,518
effective HSP length: 90
effective length of query: 37
effective length of database: 14,839,578
effective search space: 549064386
effective search space used: 549064386
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.