BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|22035700 synaptogyrin 1 isoform 1c [Homo sapiens] (192 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|22035700 synaptogyrin 1 isoform 1c [Homo sapiens] 397 e-111 gi|22035698 synaptogyrin 1 isoform 1b [Homo sapiens] 322 2e-88 gi|22035696 synaptogyrin 1 isoform 1a [Homo sapiens] 272 1e-73 gi|4759202 synaptogyrin 2 [Homo sapiens] 166 9e-42 gi|6631112 synaptogyrin 3 [Homo sapiens] 162 1e-40 gi|22035702 synaptogyrin 4 [Homo sapiens] 125 3e-29 gi|194018518 synaptoporin isoform 1 [Homo sapiens] 32 0.33 gi|21389481 synaptoporin isoform 2 [Homo sapiens] 32 0.33 gi|61635915 membrane-associated transporter protein isoform a [H... 30 1.3 gi|61636000 membrane-associated transporter protein isoform b [H... 30 1.3 gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo ... 30 1.3 gi|30520333 chemokine-like factor superfamily 4 isoform 1 [Homo ... 30 1.3 gi|122937337 fat storage-inducing transmembrane protein 2 [Homo ... 30 1.6 gi|21729876 ATP-binding cassette, sub-family C, member 11 isofor... 28 4.8 gi|21729873 ATP-binding cassette, sub-family C, member 11 isofor... 28 4.8 gi|15149474 ATP-binding cassette, sub-family C, member 11 isofor... 28 4.8 gi|53828683 olfactory receptor, family 52, subfamily B, member 2... 28 4.8 gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo sap... 28 6.3 >gi|22035700 synaptogyrin 1 isoform 1c [Homo sapiens] Length = 192 Score = 397 bits (1020), Expect = e-111 Identities = 192/192 (100%), Positives = 192/192 (100%) Query: 1 MLTLEFGILEFDPSWIGSWTQRSWVSWRSRPGCELFSIVVFGSIVNEGYLNSASEGEEFC 60 MLTLEFGILEFDPSWIGSWTQRSWVSWRSRPGCELFSIVVFGSIVNEGYLNSASEGEEFC Sbjct: 1 MLTLEFGILEFDPSWIGSWTQRSWVSWRSRPGCELFSIVVFGSIVNEGYLNSASEGEEFC 60 Query: 61 IYNRNPNACSYGVAVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLW 120 IYNRNPNACSYGVAVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLW Sbjct: 61 IYNRNPNACSYGVAVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLW 120 Query: 121 FVGFCYLANQWQVSKPKDNPLNEGTDAARAAIAFSFFSIFTWSLTAALAVRRFKDLSFQE 180 FVGFCYLANQWQVSKPKDNPLNEGTDAARAAIAFSFFSIFTWSLTAALAVRRFKDLSFQE Sbjct: 121 FVGFCYLANQWQVSKPKDNPLNEGTDAARAAIAFSFFSIFTWSLTAALAVRRFKDLSFQE 180 Query: 181 EYSTLFPASAQP 192 EYSTLFPASAQP Sbjct: 181 EYSTLFPASAQP 192 >gi|22035698 synaptogyrin 1 isoform 1b [Homo sapiens] Length = 191 Score = 322 bits (824), Expect = 2e-88 Identities = 161/168 (95%), Positives = 161/168 (95%), Gaps = 7/168 (4%) Query: 25 VSWRSRPGCELFSIVVFGSIVNEGYLNSASEGEEFCIYNRNPNACSYGVAVGVLAFLTCL 84 VSW LFSIVVFGSIVNEGYLNSASEGEEFCIYNRNPNACSYGVAVGVLAFLTCL Sbjct: 31 VSW-------LFSIVVFGSIVNEGYLNSASEGEEFCIYNRNPNACSYGVAVGVLAFLTCL 83 Query: 85 LYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYLANQWQVSKPKDNPLNEG 144 LYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYLANQWQVSKPKDNPLNEG Sbjct: 84 LYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYLANQWQVSKPKDNPLNEG 143 Query: 145 TDAARAAIAFSFFSIFTWSLTAALAVRRFKDLSFQEEYSTLFPASAQP 192 TDAARAAIAFSFFSIFTWSLTAALAVRRFKDLSFQEEYSTLFPASAQP Sbjct: 144 TDAARAAIAFSFFSIFTWSLTAALAVRRFKDLSFQEEYSTLFPASAQP 191 >gi|22035696 synaptogyrin 1 isoform 1a [Homo sapiens] Length = 233 Score = 272 bits (696), Expect = 1e-73 Identities = 139/172 (80%), Positives = 146/172 (84%), Gaps = 11/172 (6%) Query: 25 VSWRSRPGCELFSIVVFGSIVNEGYLNSASEGEEFCIYNRNPNACSYGVAVGVLAFLTCL 84 VSW LFSIVVFGSIVNEGYLNSASEGEEFCIYNRNPNACSYGVAVGVLAFLTCL Sbjct: 31 VSW-------LFSIVVFGSIVNEGYLNSASEGEEFCIYNRNPNACSYGVAVGVLAFLTCL 83 Query: 85 LYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYLANQWQVSKPKDNPLNEG 144 LYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYLANQWQVSKPKDNPLNEG Sbjct: 84 LYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYLANQWQVSKPKDNPLNEG 143 Query: 145 TDAARAAIAFSFFSIFTWSLTAALAVRRFK----DLSFQEEYSTLFPASAQP 192 TDAARAAIAFSFFSIFTW+ A LA +R++ F ++Y S+ P Sbjct: 144 TDAARAAIAFSFFSIFTWAGQAVLAFQRYQIGADSALFSQDYMDPSQDSSMP 195 >gi|4759202 synaptogyrin 2 [Homo sapiens] Length = 224 Score = 166 bits (421), Expect = 9e-42 Identities = 76/146 (52%), Positives = 102/146 (69%), Gaps = 2/146 (1%) Query: 29 SRPGCELFSIVVFGSIVNEGYLNSASEGEEFCIYNRNPNACSYGVAVGVLAFLTCLLYLA 88 +R C +F+++VF I EGY N+ + +C++NRN +AC YG A+GVLAFL +L Sbjct: 28 ARAVCLVFALIVFSCIYGEGYSNAHESKQMYCVFNRNEDACRYGSAIGVLAFLASAFFLV 87 Query: 89 LDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYLANQWQVSKPKDNPLNEGTDAA 148 +D YFPQIS+ DRK V+ D+ SA W FLWFVGFC+L NQW V+ PKD + G D+ Sbjct: 88 VDAYFPQISNATDRKYLVIGDLLFSALWTFLWFVGFCFLTNQWAVTNPKD--VLVGADSV 145 Query: 149 RAAIAFSFFSIFTWSLTAALAVRRFK 174 RAAI FSFFSIF+W + A+LA +R+K Sbjct: 146 RAAITFSFFSIFSWGVLASLAYQRYK 171 >gi|6631112 synaptogyrin 3 [Homo sapiens] Length = 229 Score = 162 bits (411), Expect = 1e-40 Identities = 80/140 (57%), Positives = 100/140 (71%), Gaps = 1/140 (0%) Query: 35 LFSIVVFGSIVNEGYLNSASEGEEFCIYNRNPNACSYGVAVGVLAFLTCLLYLALDVYFP 94 +FSI VFG IVNEGY+N+ S E C++N N AC +GVA+G+ AFL C +L LDV F Sbjct: 34 VFSIAVFGPIVNEGYVNTDSGPELRCVFNGNAGACRFGVALGLGAFLACAAFLLLDVRFQ 93 Query: 95 QISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYLANQWQVSKPKDNPLNEGTDAARAAIAF 154 QISSV+DR++AVL D+G S W+FLWFVGFC+L NQWQ + P G DAARAAIAF Sbjct: 94 QISSVRDRRRAVLLDLGFSGLWSFLWFVGFCFLTNQWQRTAPGPATTQAG-DAARAAIAF 152 Query: 155 SFFSIFTWSLTAALAVRRFK 174 SFFSI +W A++RF+ Sbjct: 153 SFFSILSWVALTVKALQRFR 172 >gi|22035702 synaptogyrin 4 [Homo sapiens] Length = 234 Score = 125 bits (313), Expect = 3e-29 Identities = 64/142 (45%), Positives = 89/142 (62%), Gaps = 5/142 (3%) Query: 35 LFSIVVFGSIVNEGYLNSASEGEEFCIYNRNPNACSYGVAVGVLAFLTCLLYLALDVYFP 94 +FS++VF S++ +GY N + CI N N ACS+ V G LAFL+CL +L LD Sbjct: 32 VFSLIVFSSLLTDGYQNKMESPQLHCILNSNSVACSFAVGAGFLAFLSCLAFLVLDTQET 91 Query: 95 QISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYLANQWQVSKPKDNPLNEGTDAARAAIAF 154 +I+ + + L D ++ WA +WF+GFC+LANQWQ S PK+ L G+ +A+AAIAF Sbjct: 92 RIAGTRFKTAFQLLDFILAVLWAVVWFMGFCFLANQWQHSPPKEFLL--GSSSAQAAIAF 149 Query: 155 SFFSIFTWSLTAALAVRRFKDL 176 +FFSI W A LA F+DL Sbjct: 150 TFFSILVWIFQAYLA---FQDL 168 >gi|194018518 synaptoporin isoform 1 [Homo sapiens] Length = 285 Score = 32.0 bits (71), Expect = 0.33 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 55 EGEEFCIYNRNPNACSYGVAVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSA 114 E ++ + + ++ + V V V AFL L + ++F + ++ + L D V+ Sbjct: 85 ERQKLALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQ--NKYRENNRGPLIDFIVTV 142 Query: 115 FWAFLWFVG 123 ++FLW VG Sbjct: 143 VFSFLWLVG 151 >gi|21389481 synaptoporin isoform 2 [Homo sapiens] Length = 265 Score = 32.0 bits (71), Expect = 0.33 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 55 EGEEFCIYNRNPNACSYGVAVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSA 114 E ++ + + ++ + V V V AFL L + ++F + ++ + L D V+ Sbjct: 65 ERQKLALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQ--NKYRENNRGPLIDFIVTV 122 Query: 115 FWAFLWFVG 123 ++FLW VG Sbjct: 123 VFSFLWLVG 131 >gi|61635915 membrane-associated transporter protein isoform a [Homo sapiens] Length = 530 Score = 30.0 bits (66), Expect = 1.3 Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 20/100 (20%) Query: 25 VSWRSRPGCELFSIVVFGSIVNEGYLNSASEGEEFCIYNRNPNACSYGVAVGVLAFLTCL 84 + W + LF G IV G SA EF IY R GV VG F Sbjct: 326 IGWTAFLSNMLFFTDFMGQIVYRGDPYSAHNSTEFLIYER-------GVEVGCWGFCINS 378 Query: 85 LYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGF 124 ++ +L YF +K ++S IG+ L+F G+ Sbjct: 379 VFSSLYSYF---------QKVLVSYIGLKG----LYFTGY 405 >gi|61636000 membrane-associated transporter protein isoform b [Homo sapiens] Length = 460 Score = 30.0 bits (66), Expect = 1.3 Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 20/100 (20%) Query: 25 VSWRSRPGCELFSIVVFGSIVNEGYLNSASEGEEFCIYNRNPNACSYGVAVGVLAFLTCL 84 + W + LF G IV G SA EF IY R GV VG F Sbjct: 326 IGWTAFLSNMLFFTDFMGQIVYRGDPYSAHNSTEFLIYER-------GVEVGCWGFCINS 378 Query: 85 LYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGF 124 ++ +L YF +K ++S IG+ L+F G+ Sbjct: 379 VFSSLYSYF---------QKVLVSYIGLKG----LYFTGY 405 >gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo sapiens] Length = 208 Score = 30.0 bits (66), Expect = 1.3 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 21/107 (19%) Query: 68 ACSYGVAVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYL 127 +CS V GVL + L L + PQI+ L+D+ + AFL+F+ L Sbjct: 91 SCSAFVVTGVLLIM---FSLNLHMRIPQINWN-------LTDLVNTGLSAFLFFIASIVL 140 Query: 128 ANQWQVSKPKDNPLNEGTDAARAAIAFSFFSIFTWSLTAALAVRRFK 174 A LN A AA+ F F + +++ LAV++++ Sbjct: 141 A-----------ALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWR 176 >gi|30520333 chemokine-like factor superfamily 4 isoform 1 [Homo sapiens] Length = 234 Score = 30.0 bits (66), Expect = 1.3 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 21/107 (19%) Query: 68 ACSYGVAVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYL 127 +CS V GVL + L L + PQI+ L+D+ + AFL+F+ L Sbjct: 91 SCSAFVVTGVLLIM---FSLNLHMRIPQINWN-------LTDLVNTGLSAFLFFIASIVL 140 Query: 128 ANQWQVSKPKDNPLNEGTDAARAAIAFSFFSIFTWSLTAALAVRRFK 174 A LN A AA+ F F + +++ LAV++++ Sbjct: 141 A-----------ALNHRAGAEIAAVIFGFLATAAYAVNTFLAVQKWR 176 >gi|122937337 fat storage-inducing transmembrane protein 2 [Homo sapiens] Length = 262 Score = 29.6 bits (65), Expect = 1.6 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 73 VAVGVLAFLTCLLYLALDVYFPQIS-SVKDRKKAVLSDIGVSAFW 116 VA+G+L F+ L++L VYF +S V +LS G FW Sbjct: 193 VALGILTFIWVLMFLCTAVYFHNLSQKVFGTLFGLLSWYGTYGFW 237 >gi|21729876 ATP-binding cassette, sub-family C, member 11 isoform b [Homo sapiens] Length = 1344 Score = 28.1 bits (61), Expect = 4.8 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 9 LEFDPSWIGSWTQRSWVSWRSRPGCELFS-IVVFGSIVNEGYLNSASEGEEFCIYNRNPN 67 L F SWI + QR+ + +R+ F ++ F S+++ + GE + + N Sbjct: 218 LSFSSSWIIN--QRTAIRFRAAVSSFAFEKLIQFKSVIH------ITSGEAISFFTGDVN 269 Query: 68 ACSYGVAVGVLAFLTC--LLYLALDVYF 93 GV G L +TC L+ ++ YF Sbjct: 270 YLFEGVCYGPLVLITCASLVICSISSYF 297 >gi|21729873 ATP-binding cassette, sub-family C, member 11 isoform a [Homo sapiens] Length = 1382 Score = 28.1 bits (61), Expect = 4.8 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 9 LEFDPSWIGSWTQRSWVSWRSRPGCELFS-IVVFGSIVNEGYLNSASEGEEFCIYNRNPN 67 L F SWI + QR+ + +R+ F ++ F S+++ + GE + + N Sbjct: 218 LSFSSSWIIN--QRTAIRFRAAVSSFAFEKLIQFKSVIH------ITSGEAISFFTGDVN 269 Query: 68 ACSYGVAVGVLAFLTC--LLYLALDVYF 93 GV G L +TC L+ ++ YF Sbjct: 270 YLFEGVCYGPLVLITCASLVICSISSYF 297 >gi|15149474 ATP-binding cassette, sub-family C, member 11 isoform a [Homo sapiens] Length = 1382 Score = 28.1 bits (61), Expect = 4.8 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 11/88 (12%) Query: 9 LEFDPSWIGSWTQRSWVSWRSRPGCELFS-IVVFGSIVNEGYLNSASEGEEFCIYNRNPN 67 L F SWI + QR+ + +R+ F ++ F S+++ + GE + + N Sbjct: 218 LSFSSSWIIN--QRTAIRFRAAVSSFAFEKLIQFKSVIH------ITSGEAISFFTGDVN 269 Query: 68 ACSYGVAVGVLAFLTC--LLYLALDVYF 93 GV G L +TC L+ ++ YF Sbjct: 270 YLFEGVCYGPLVLITCASLVICSISSYF 297 >gi|53828683 olfactory receptor, family 52, subfamily B, member 2 [Homo sapiens] Length = 323 Score = 28.1 bits (61), Expect = 4.8 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Query: 127 LANQWQVSKPKDNPLNEG--TDAARAAIAFSFFSIFTWSLTAAL 168 LAN + P NP+ G T R +A FF I TW T+ L Sbjct: 278 LANLYVAVPPMLNPIVYGVKTKQIREGVAHRFFDIKTWCCTSPL 321 >gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo sapiens] Length = 1581 Score = 27.7 bits (60), Expect = 6.3 Identities = 15/56 (26%), Positives = 33/56 (58%), Gaps = 6/56 (10%) Query: 78 LAFLTCLLYLALDVYFPQISSVKDRK--KAVLSDIGV--SAFWAF--LWFVGFCYL 127 L +C++ + +Y+ ++ ++RK KA+++ +G+ SAFW L + GF ++ Sbjct: 224 LYLFSCIISFSSFIYYASVNVTRERKRMKALMTMMGLRDSAFWLSWGLLYAGFIFI 279 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.324 0.137 0.445 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,211,435 Number of Sequences: 37866 Number of extensions: 271757 Number of successful extensions: 681 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 670 Number of HSP's gapped (non-prelim): 20 length of query: 192 length of database: 18,247,518 effective HSP length: 97 effective length of query: 95 effective length of database: 14,574,516 effective search space: 1384579020 effective search space used: 1384579020 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.