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Search of human proteins with 115305569
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|115305569 adenosine A1 receptor [Homo sapiens]
(326 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|115305569 adenosine A1 receptor [Homo sapiens] 655 0.0
gi|4501947 adenosine A1 receptor [Homo sapiens] 655 0.0
gi|4501953 adenosine A3 receptor isoform 2 [Homo sapiens] 301 4e-82
gi|5921992 adenosine A2a receptor [Homo sapiens] 301 7e-82
gi|4501951 adenosine A2b receptor [Homo sapiens] 270 2e-72
gi|46559769 adenosine A3 receptor isoform 1 [Homo sapiens] 123 2e-28
gi|197085610 histamine receptor H2 isoform 1 [Homo sapiens] 122 4e-28
gi|13435405 histamine receptor H2 isoform 2 [Homo sapiens] 122 4e-28
gi|94421458 serotonin 5-HT4 receptor isoform hb [Homo sapiens] 115 4e-26
gi|4503383 dopamine receptor D1 [Homo sapiens] 115 7e-26
gi|94421462 serotonin 5-HT4 receptor isoform n [Homo sapiens] 114 9e-26
gi|94421460 serotonin 5-HT4 receptor isoform i [Homo sapiens] 114 9e-26
gi|94421456 serotonin 5-HT4 receptor isoform d [Homo sapiens] 114 9e-26
gi|94421454 serotonin 5-HT4 receptor isoform a [Homo sapiens] 114 9e-26
gi|41282074 serotonin 5-HT4 receptor isoform g [Homo sapiens] 114 9e-26
gi|11321563 serotonin 5-HT4 receptor isoform b [Homo sapiens] 114 9e-26
gi|111118990 alpha-1A-adrenergic receptor isoform 4 [Homo sapiens] 112 3e-25
gi|111118992 alpha-1A-adrenergic receptor isoform 1 [Homo sapiens] 112 3e-25
gi|111118986 alpha-1A-adrenergic receptor isoform 2 [Homo sapiens] 112 3e-25
gi|111118988 alpha-1A-adrenergic receptor isoform 3 [Homo sapiens] 112 3e-25
gi|4501959 alpha-1B-adrenergic receptor [Homo sapiens] 109 3e-24
gi|4501957 alpha-1D-adrenergic receptor [Homo sapiens] 108 5e-24
gi|4504541 5-hydroxytryptamine (serotonin) receptor 2C [Homo sap... 107 1e-23
gi|16950638 lysophosphatidic acid receptor 1 [Homo sapiens] 106 2e-23
gi|16950636 lysophosphatidic acid receptor 1 [Homo sapiens] 106 2e-23
gi|4503391 dopamine receptor D5 [Homo sapiens] 104 1e-22
gi|4501969 adrenergic, beta-2-, receptor, surface [Homo sapiens] 102 4e-22
gi|222080095 orexin receptor 1 [Homo sapiens] 102 5e-22
gi|4504545 5-hydroxytryptamine (serotonin) receptor 6 [Homo sapi... 100 2e-21
gi|5174535 melanocortin 5 receptor [Homo sapiens] 99 4e-21
>gi|115305569 adenosine A1 receptor [Homo sapiens]
Length = 326
Score = 655 bits (1689), Expect = 0.0
Identities = 326/326 (100%), Positives = 326/326 (100%)
Query: 1 MPPSISAFQAAYIGIEVLIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGA 60
MPPSISAFQAAYIGIEVLIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGA
Sbjct: 1 MPPSISAFQAAYIGIEVLIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGA 60
Query: 61 LVIPLAILINIGPQTYFHTCLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVT 120
LVIPLAILINIGPQTYFHTCLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVT
Sbjct: 61 LVIPLAILINIGPQTYFHTCLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVT 120
Query: 121 PRRAAVAIAGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYM 180
PRRAAVAIAGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYM
Sbjct: 121 PRRAAVAIAGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYM 180
Query: 181 VYFNFFVWVLPPLLLMVLIYLEVFYLIRKQLNKKVSASSGDPQKYYGKELKIAKSLALIL 240
VYFNFFVWVLPPLLLMVLIYLEVFYLIRKQLNKKVSASSGDPQKYYGKELKIAKSLALIL
Sbjct: 181 VYFNFFVWVLPPLLLMVLIYLEVFYLIRKQLNKKVSASSGDPQKYYGKELKIAKSLALIL 240
Query: 241 FLFALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFL 300
FLFALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFL
Sbjct: 241 FLFALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFL 300
Query: 301 KIWNDHFRCQPAPPIDEDLPEERPDD 326
KIWNDHFRCQPAPPIDEDLPEERPDD
Sbjct: 301 KIWNDHFRCQPAPPIDEDLPEERPDD 326
>gi|4501947 adenosine A1 receptor [Homo sapiens]
Length = 326
Score = 655 bits (1689), Expect = 0.0
Identities = 326/326 (100%), Positives = 326/326 (100%)
Query: 1 MPPSISAFQAAYIGIEVLIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGA 60
MPPSISAFQAAYIGIEVLIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGA
Sbjct: 1 MPPSISAFQAAYIGIEVLIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGA 60
Query: 61 LVIPLAILINIGPQTYFHTCLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVT 120
LVIPLAILINIGPQTYFHTCLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVT
Sbjct: 61 LVIPLAILINIGPQTYFHTCLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVT 120
Query: 121 PRRAAVAIAGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYM 180
PRRAAVAIAGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYM
Sbjct: 121 PRRAAVAIAGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYM 180
Query: 181 VYFNFFVWVLPPLLLMVLIYLEVFYLIRKQLNKKVSASSGDPQKYYGKELKIAKSLALIL 240
VYFNFFVWVLPPLLLMVLIYLEVFYLIRKQLNKKVSASSGDPQKYYGKELKIAKSLALIL
Sbjct: 181 VYFNFFVWVLPPLLLMVLIYLEVFYLIRKQLNKKVSASSGDPQKYYGKELKIAKSLALIL 240
Query: 241 FLFALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFL 300
FLFALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFL
Sbjct: 241 FLFALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFL 300
Query: 301 KIWNDHFRCQPAPPIDEDLPEERPDD 326
KIWNDHFRCQPAPPIDEDLPEERPDD
Sbjct: 301 KIWNDHFRCQPAPPIDEDLPEERPDD 326
>gi|4501953 adenosine A3 receptor isoform 2 [Homo sapiens]
Length = 318
Score = 301 bits (772), Expect = 4e-82
Identities = 153/316 (48%), Positives = 217/316 (68%), Gaps = 9/316 (2%)
Query: 4 SISAFQAAYIGIEVLIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVI 63
++S YI +E+ I L ++ GNVLVI VK+N +L+ TF FIVSLA+AD+AVG LV+
Sbjct: 7 ALSLANVTYITMEIFIGLCAIVGNVLVICVVKLNPSLQTTTFYFIVSLALADIAVGVLVM 66
Query: 64 PLAILINIGPQTYFHTCLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVTPRR 123
PLAI++++G +F++CL + C +LI T +SI++LLAIAVDRYLRVK+ +RYK V T RR
Sbjct: 67 PLAIVVSLGITIHFYSCLFMTCLLLIFTHASIMSLLAIAVDRYLRVKLTVRYKRVTTHRR 126
Query: 124 AAVAIAGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMVYF 183
+A+ CW++SF+VGLTPMFGWN E + C+F V+ M+YMVYF
Sbjct: 127 IWLALGLCWLVSFLVGLTPMFGWNMKLTSEY------HRNVTFLSCQFVSVMRMDYMVYF 180
Query: 184 NFFVWVLPPLLLMVLIYLEVFYLIRKQLNKKVSASSGDPQKYYGKELKIAKSLALILFLF 243
+F W+ PL++M IYL++FY+IR +L+ +S +S + +YG+E K AKSL L+LFLF
Sbjct: 181 SFLTWIFIPLVVMCAIYLDIFYIIRNKLSLNLS-NSKETGAFYGREFKTAKSLFLVLFLF 239
Query: 244 ALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFLKIW 303
ALSWLPL I+NCI F + P ++ Y+ I L+H NS MNPIVYA++I+KF+ T+L I
Sbjct: 240 ALSWLPLSIINCIIYF--NGEVPQLVLYMGILLSHANSMMNPIVYAYKIKKFKETYLLIL 297
Query: 304 NDHFRCQPAPPIDEDL 319
C P+ +D +
Sbjct: 298 KACVVCHPSDSLDTSI 313
>gi|5921992 adenosine A2a receptor [Homo sapiens]
Length = 412
Score = 301 bits (770), Expect = 7e-82
Identities = 158/307 (51%), Positives = 202/307 (65%), Gaps = 3/307 (0%)
Query: 10 AAYIGIEVLIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIPLAILI 69
+ YI +E+ IA++++ GNVLV WAV +N L++ T F+VSLA AD+AVG L IP AI I
Sbjct: 7 SVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITI 66
Query: 70 NIGPQTYFHTCLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVTPRRAAVAIA 129
+ G H CL +AC VL+LTQSSI +LLAIA+DRY+ ++IPLRY +VT RA IA
Sbjct: 67 STGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIA 126
Query: 130 GCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMVYFNFFVWV 189
CW+LSF +GLTPM GWNN + + GE + C FE V+ M YMVYFNFF V
Sbjct: 127 ICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFFACV 186
Query: 190 LPPLLLMVLIYLEVFYLIRKQLNKKVS--ASSGDPQKYYGKELKIAKSLALILFLFALSW 247
L PLLLM+ +YL +F R+QL + S + KE+ AKSLA+I+ LFAL W
Sbjct: 187 LVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCW 246
Query: 248 LPLHILNCITLFCPSC-HKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFLKIWNDH 306
LPLHI+NC T FCP C H P L Y+AI L+H NS +NP +YA+RI++FR TF KI H
Sbjct: 247 LPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSH 306
Query: 307 FRCQPAP 313
Q P
Sbjct: 307 VLRQQEP 313
>gi|4501951 adenosine A2b receptor [Homo sapiens]
Length = 332
Score = 270 bits (689), Expect = 2e-72
Identities = 147/307 (47%), Positives = 201/307 (65%), Gaps = 8/307 (2%)
Query: 10 AAYIGIEVLIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIPLAILI 69
A Y+ +E++IA +SV GNVLV AV L+ T F+VSLA ADVAVG IP AI I
Sbjct: 8 ALYVALELVIAALSVAGNVLVCAAVGTANTLQTPTNYFLVSLAAADVAVGLFAIPFAITI 67
Query: 70 NIGPQTYFHTCLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVTPRRAAVAIA 129
++G T F+ CL +AC VL+LTQSSI +LLA+AVDRYL + +PLRYK +VT RA IA
Sbjct: 68 SLGFCTDFYGCLFLACFVLVLTQSSIFSLLAVAVDRYLAICVPLRYKSLVTGTRARGVIA 127
Query: 130 GCWILSFVVGLTPMFGWNNLSAV----ERAWAANGSMGEPVIKCEFEKVISMEYMVYFNF 185
W+L+F +GLTP GWN+ + W + ++KC FE V+ M YMVYFNF
Sbjct: 128 VLWVLAFGIGLTPFLGWNSKDSATNNCTEPWDGTTNESCCLVKCLFENVVPMSYMVYFNF 187
Query: 186 FVWVLPPLLLMVLIYLEVFYLIRKQLNKKVSASSGDPQKYYGKELKIAKSLALILFLFAL 245
F VLPPLL+M++IY+++F + +QL + + + +E+ AKSLA+I+ +FAL
Sbjct: 188 FGCVLPPLLIMLVIYIKIFLVACRQLQR--TELMDHSRTTLQREIHAAKSLAMIVGIFAL 245
Query: 246 SWLPLHILNCITLFCPS--CHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFLKIW 303
WLP+H +NC+TLF P+ +KP +AI L+H NS +NPIVYA+R + FR TF KI
Sbjct: 246 CWLPVHAVNCVTLFQPAQGKNKPKWAMNMAILLSHANSVVNPIVYAYRNRDFRYTFHKII 305
Query: 304 NDHFRCQ 310
+ + CQ
Sbjct: 306 SRYLLCQ 312
>gi|46559769 adenosine A3 receptor isoform 1 [Homo sapiens]
Length = 347
Score = 123 bits (309), Expect = 2e-28
Identities = 66/133 (49%), Positives = 95/133 (71%), Gaps = 9/133 (6%)
Query: 4 SISAFQAAYIGIEVLIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVI 63
++S YI +E+ I L ++ GNVLVI VK+N +L+ TF FIVSLA+AD+AVG LV+
Sbjct: 7 ALSLANVTYITMEIFIGLCAIVGNVLVICVVKLNPSLQTTTFYFIVSLALADIAVGVLVM 66
Query: 64 PLAILINIGPQTYFHTCLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVTPRR 123
PLAI++++G +F++CL + C +LI T +SI++LLAIAVDRYLRVK+ +R+++ P
Sbjct: 67 PLAIVVSLGITIHFYSCLFMTCLLLIFTHASIMSLLAIAVDRYLRVKLTVRFRIPGLP-- 124
Query: 124 AAVAIAGCWILSF 136
GC ILSF
Sbjct: 125 ------GC-ILSF 130
>gi|197085610 histamine receptor H2 isoform 1 [Homo sapiens]
Length = 397
Score = 122 bits (306), Expect = 4e-28
Identities = 92/300 (30%), Positives = 148/300 (49%), Gaps = 18/300 (6%)
Query: 10 AAYIGIEVLIA---LVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIPLA 66
A I I V++A L++V GNV+V AV +N+ LR+ T CFIVSLA+ D+ +G LV+P +
Sbjct: 16 ACKITITVVLAVLILITVAGNVVVCLAVGLNRRLRNLTNCFIVSLAITDLLLGLLVLPFS 75
Query: 67 ILINIGPQTYFHT--CLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVTPRRA 124
+ + + F C + ++L +SIL L I++DRY V PLRY ++VTP R
Sbjct: 76 AIYQLSCKWSFGKVFCNIYTSLDVMLCTASILNLFMISLDRYCAVMDPLRYPVLVTPVRV 135
Query: 125 AVAIAGCWILSFVVG-LTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMVYF 183
A+++ W++S + L+ GWN+ + + KC KV E
Sbjct: 136 AISLVLIWVISITLSFLSIHLGWNSRNETSKG-------NHTTSKC---KVQVNEVYGLV 185
Query: 184 NFFVWVLPPLLLMVLIYLEVFYLIRKQLNKKVSASSGDPQKYYGKELKIAKSLALILFLF 243
+ V PLL+M + Y +F + R Q + SS +E K +LA ++ F
Sbjct: 186 DGLVTFYLPLLIMCITYYRIFKVARDQAKRINHISSWKAATI--REHKATVTLAAVMGAF 243
Query: 244 ALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFLKIW 303
+ W P +L I ++L + NSA+NPI+YA + FR + +++
Sbjct: 244 IICWFPYFTAFVYRGLRGDDAINEVLEAIVLWLGYANSALNPILYAALNRDFRTGYQQLF 303
>gi|13435405 histamine receptor H2 isoform 2 [Homo sapiens]
Length = 359
Score = 122 bits (306), Expect = 4e-28
Identities = 92/300 (30%), Positives = 148/300 (49%), Gaps = 18/300 (6%)
Query: 10 AAYIGIEVLIA---LVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIPLA 66
A I I V++A L++V GNV+V AV +N+ LR+ T CFIVSLA+ D+ +G LV+P +
Sbjct: 16 ACKITITVVLAVLILITVAGNVVVCLAVGLNRRLRNLTNCFIVSLAITDLLLGLLVLPFS 75
Query: 67 ILINIGPQTYFHT--CLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVTPRRA 124
+ + + F C + ++L +SIL L I++DRY V PLRY ++VTP R
Sbjct: 76 AIYQLSCKWSFGKVFCNIYTSLDVMLCTASILNLFMISLDRYCAVMDPLRYPVLVTPVRV 135
Query: 125 AVAIAGCWILSFVVG-LTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMVYF 183
A+++ W++S + L+ GWN+ + + KC KV E
Sbjct: 136 AISLVLIWVISITLSFLSIHLGWNSRNETSKG-------NHTTSKC---KVQVNEVYGLV 185
Query: 184 NFFVWVLPPLLLMVLIYLEVFYLIRKQLNKKVSASSGDPQKYYGKELKIAKSLALILFLF 243
+ V PLL+M + Y +F + R Q + SS +E K +LA ++ F
Sbjct: 186 DGLVTFYLPLLIMCITYYRIFKVARDQAKRINHISSWKAATI--REHKATVTLAAVMGAF 243
Query: 244 ALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFLKIW 303
+ W P +L I ++L + NSA+NPI+YA + FR + +++
Sbjct: 244 IICWFPYFTAFVYRGLRGDDAINEVLEAIVLWLGYANSALNPILYAALNRDFRTGYQQLF 303
>gi|94421458 serotonin 5-HT4 receptor isoform hb [Homo sapiens]
Length = 402
Score = 115 bits (289), Expect = 4e-26
Identities = 93/313 (29%), Positives = 153/313 (48%), Gaps = 30/313 (9%)
Query: 19 IALVSVPGNVLVIWAVKVNQALRDA-TFCFIVSLAVADVAVGALVIPLAILINIGPQTYF 77
+ L+++ GN+LV+ AV ++ LR T FIVSLA AD+ V LV+P + + +
Sbjct: 29 VILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQDIWIY 88
Query: 78 HT--CLMVACPVLILTQSSILALLAIAVDRYLRVKI-PLRYKMVVTPRRAAVAIAGCWIL 134
CL+ ++LT +SI L I++DRY + PL Y+ +TP R A+ + GCW++
Sbjct: 89 GEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALMLGGCWVI 148
Query: 135 -SFVVGLTPMFGWNNLSAVERAWAANGSMGE---PVIKCEFEKVISMEYMVYFNFFVWVL 190
+F+ L M GWNN+ ++ + N +G+ + K +F + + Y V+ + +
Sbjct: 149 PTFISFLPIMQGWNNIGIIDLERSLNQGLGQDFHAIEKRKFNQNSNSTYCVFMVNKPYAI 208
Query: 191 P--------PLLLMVLIYLEVFYLIR------KQLNKKVSASSGDPQK-------YYGKE 229
P LLMVL Y ++ + + L + ++S PQ E
Sbjct: 209 TCSVVAFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRPQSADQHSTHRMRTE 268
Query: 230 LKIAKSLALILFLFALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYA 289
K AK+L +I+ F L W P + N + F + T ++L + NS +NP +YA
Sbjct: 269 TKAAKTLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAF-LWLGYINSGLNPFLYA 327
Query: 290 FRIQKFRVTFLKI 302
F + FR FL I
Sbjct: 328 FLNKSFRRAFLII 340
>gi|4503383 dopamine receptor D1 [Homo sapiens]
Length = 446
Score = 115 bits (287), Expect = 7e-26
Identities = 89/329 (27%), Positives = 156/329 (47%), Gaps = 41/329 (12%)
Query: 4 SISAFQAAYIGIEVLIALVSVPGNVLVIWAVKVNQALRD-ATFCFIVSLAVADVAVGALV 62
S+ A ++ + +L L+ GN LV AV + LR T F++SLAV+D+ V LV
Sbjct: 21 SVRILTACFLSLLILSTLL---GNTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLV 77
Query: 63 IPLAILINI-GPQTYFHTCLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVTP 121
+P + I G + C + ++ + +SIL L I+VDRY + P RY+ +TP
Sbjct: 78 MPWKAVAEIAGFWPFGSFCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTP 137
Query: 122 RRAAVAIAGCWILSFVVGLTPM-FGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYM 180
+ A + I+ W LS ++ P+ W+ + S+ E + C + +S Y
Sbjct: 138 KAAFILISVAWTLSVLISFIPVQLSWHKAKPTSPSDGNATSLAETIDNC--DSSLSRTYA 195
Query: 181 VYFNFFVWVLPPLLLMVLIYLEVFYLIRKQL--------------NKKVSASSGDP---- 222
+ + + + P+ +M++ Y ++ + +KQ+ N + + +G P
Sbjct: 196 ISSSVISFYI-PVAIMIVTYTRIYRIAQKQIRRIAALERAAVHAKNCQTTTGNGKPVECS 254
Query: 223 ------QKYYGKELKIAKSLALILFLFALSWLPLHILNCITLFC------PSCHKPSILT 270
+ + +E K+ K+L++I+ +F WLP ILNCI FC P C +
Sbjct: 255 QPESSFKMSFKRETKVLKTLSVIMGVFVCCWLPFFILNCILPFCGSGETQPFCIDSNTFD 314
Query: 271 YIAIFLTHGNSAMNPIVYAFRIQKFRVTF 299
+ ++ NS++NPI+YAF FR F
Sbjct: 315 -VFVWFGWANSSLNPIIYAFNAD-FRKAF 341
>gi|94421462 serotonin 5-HT4 receptor isoform n [Homo sapiens]
Length = 359
Score = 114 bits (286), Expect = 9e-26
Identities = 90/302 (29%), Positives = 148/302 (49%), Gaps = 22/302 (7%)
Query: 19 IALVSVPGNVLVIWAVKVNQALRDA-TFCFIVSLAVADVAVGALVIPLAILINIGPQTYF 77
+ L+++ GN+LV+ AV ++ LR T FIVSLA AD+ V LV+P + + +
Sbjct: 29 VILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQDIWIY 88
Query: 78 HT--CLMVACPVLILTQSSILALLAIAVDRYLRVKI-PLRYKMVVTPRRAAVAIAGCWIL 134
CL+ ++LT +SI L I++DRY + PL Y+ +TP R A+ + GCW++
Sbjct: 89 GEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALMLGGCWVI 148
Query: 135 -SFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMVYFNFFVWVLPPL 193
+F+ L M GWNN+ ++ + C F +++ Y + + + + P
Sbjct: 149 PTFISFLPIMQGWNNIGIIDLIEKRKFNQNSNSTYCVF--MVNKPYAITCSVVAFYI-PF 205
Query: 194 LLMVLIYLEVFYLIR------KQLNKKVSASSGDPQK-------YYGKELKIAKSLALIL 240
LLMVL Y ++ + + L + ++S PQ E K AK+L +I+
Sbjct: 206 LLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRPQSADQHSTHRMRTETKAAKTLCIIM 265
Query: 241 FLFALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFL 300
F L W P + N + F + T ++L + NS +NP +YAF + FR FL
Sbjct: 266 GCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAF-LWLGYINSGLNPFLYAFLNKSFRRAFL 324
Query: 301 KI 302
I
Sbjct: 325 II 326
>gi|94421460 serotonin 5-HT4 receptor isoform i [Homo sapiens]
Length = 428
Score = 114 bits (286), Expect = 9e-26
Identities = 90/302 (29%), Positives = 148/302 (49%), Gaps = 22/302 (7%)
Query: 19 IALVSVPGNVLVIWAVKVNQALRDA-TFCFIVSLAVADVAVGALVIPLAILINIGPQTYF 77
+ L+++ GN+LV+ AV ++ LR T FIVSLA AD+ V LV+P + + +
Sbjct: 29 VILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQDIWIY 88
Query: 78 HT--CLMVACPVLILTQSSILALLAIAVDRYLRVKI-PLRYKMVVTPRRAAVAIAGCWIL 134
CL+ ++LT +SI L I++DRY + PL Y+ +TP R A+ + GCW++
Sbjct: 89 GEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALMLGGCWVI 148
Query: 135 -SFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMVYFNFFVWVLPPL 193
+F+ L M GWNN+ ++ + C F +++ Y + + + + P
Sbjct: 149 PTFISFLPIMQGWNNIGIIDLIEKRKFNQNSNSTYCVF--MVNKPYAITCSVVAFYI-PF 205
Query: 194 LLMVLIYLEVFYLIR------KQLNKKVSASSGDPQK-------YYGKELKIAKSLALIL 240
LLMVL Y ++ + + L + ++S PQ E K AK+L +I+
Sbjct: 206 LLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRPQSADQHSTHRMRTETKAAKTLCIIM 265
Query: 241 FLFALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFL 300
F L W P + N + F + T ++L + NS +NP +YAF + FR FL
Sbjct: 266 GCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAF-LWLGYINSGLNPFLYAFLNKSFRRAFL 324
Query: 301 KI 302
I
Sbjct: 325 II 326
>gi|94421456 serotonin 5-HT4 receptor isoform d [Homo sapiens]
Length = 360
Score = 114 bits (286), Expect = 9e-26
Identities = 90/302 (29%), Positives = 148/302 (49%), Gaps = 22/302 (7%)
Query: 19 IALVSVPGNVLVIWAVKVNQALRDA-TFCFIVSLAVADVAVGALVIPLAILINIGPQTYF 77
+ L+++ GN+LV+ AV ++ LR T FIVSLA AD+ V LV+P + + +
Sbjct: 29 VILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQDIWIY 88
Query: 78 HT--CLMVACPVLILTQSSILALLAIAVDRYLRVKI-PLRYKMVVTPRRAAVAIAGCWIL 134
CL+ ++LT +SI L I++DRY + PL Y+ +TP R A+ + GCW++
Sbjct: 89 GEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALMLGGCWVI 148
Query: 135 -SFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMVYFNFFVWVLPPL 193
+F+ L M GWNN+ ++ + C F +++ Y + + + + P
Sbjct: 149 PTFISFLPIMQGWNNIGIIDLIEKRKFNQNSNSTYCVF--MVNKPYAITCSVVAFYI-PF 205
Query: 194 LLMVLIYLEVFYLIR------KQLNKKVSASSGDPQK-------YYGKELKIAKSLALIL 240
LLMVL Y ++ + + L + ++S PQ E K AK+L +I+
Sbjct: 206 LLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRPQSADQHSTHRMRTETKAAKTLCIIM 265
Query: 241 FLFALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFL 300
F L W P + N + F + T ++L + NS +NP +YAF + FR FL
Sbjct: 266 GCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAF-LWLGYINSGLNPFLYAFLNKSFRRAFL 324
Query: 301 KI 302
I
Sbjct: 325 II 326
>gi|94421454 serotonin 5-HT4 receptor isoform a [Homo sapiens]
Length = 387
Score = 114 bits (286), Expect = 9e-26
Identities = 90/302 (29%), Positives = 148/302 (49%), Gaps = 22/302 (7%)
Query: 19 IALVSVPGNVLVIWAVKVNQALRDA-TFCFIVSLAVADVAVGALVIPLAILINIGPQTYF 77
+ L+++ GN+LV+ AV ++ LR T FIVSLA AD+ V LV+P + + +
Sbjct: 29 VILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQDIWIY 88
Query: 78 HT--CLMVACPVLILTQSSILALLAIAVDRYLRVKI-PLRYKMVVTPRRAAVAIAGCWIL 134
CL+ ++LT +SI L I++DRY + PL Y+ +TP R A+ + GCW++
Sbjct: 89 GEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALMLGGCWVI 148
Query: 135 -SFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMVYFNFFVWVLPPL 193
+F+ L M GWNN+ ++ + C F +++ Y + + + + P
Sbjct: 149 PTFISFLPIMQGWNNIGIIDLIEKRKFNQNSNSTYCVF--MVNKPYAITCSVVAFYI-PF 205
Query: 194 LLMVLIYLEVFYLIR------KQLNKKVSASSGDPQK-------YYGKELKIAKSLALIL 240
LLMVL Y ++ + + L + ++S PQ E K AK+L +I+
Sbjct: 206 LLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRPQSADQHSTHRMRTETKAAKTLCIIM 265
Query: 241 FLFALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFL 300
F L W P + N + F + T ++L + NS +NP +YAF + FR FL
Sbjct: 266 GCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAF-LWLGYINSGLNPFLYAFLNKSFRRAFL 324
Query: 301 KI 302
I
Sbjct: 325 II 326
>gi|41282074 serotonin 5-HT4 receptor isoform g [Homo sapiens]
Length = 378
Score = 114 bits (286), Expect = 9e-26
Identities = 90/302 (29%), Positives = 148/302 (49%), Gaps = 22/302 (7%)
Query: 19 IALVSVPGNVLVIWAVKVNQALRDA-TFCFIVSLAVADVAVGALVIPLAILINIGPQTYF 77
+ L+++ GN+LV+ AV ++ LR T FIVSLA AD+ V LV+P + + +
Sbjct: 29 VILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQDIWIY 88
Query: 78 HT--CLMVACPVLILTQSSILALLAIAVDRYLRVKI-PLRYKMVVTPRRAAVAIAGCWIL 134
CL+ ++LT +SI L I++DRY + PL Y+ +TP R A+ + GCW++
Sbjct: 89 GEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALMLGGCWVI 148
Query: 135 -SFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMVYFNFFVWVLPPL 193
+F+ L M GWNN+ ++ + C F +++ Y + + + + P
Sbjct: 149 PTFISFLPIMQGWNNIGIIDLIEKRKFNQNSNSTYCVF--MVNKPYAITCSVVAFYI-PF 205
Query: 194 LLMVLIYLEVFYLIR------KQLNKKVSASSGDPQK-------YYGKELKIAKSLALIL 240
LLMVL Y ++ + + L + ++S PQ E K AK+L +I+
Sbjct: 206 LLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRPQSADQHSTHRMRTETKAAKTLCIIM 265
Query: 241 FLFALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFL 300
F L W P + N + F + T ++L + NS +NP +YAF + FR FL
Sbjct: 266 GCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAF-LWLGYINSGLNPFLYAFLNKSFRRAFL 324
Query: 301 KI 302
I
Sbjct: 325 II 326
>gi|11321563 serotonin 5-HT4 receptor isoform b [Homo sapiens]
Length = 388
Score = 114 bits (286), Expect = 9e-26
Identities = 90/302 (29%), Positives = 148/302 (49%), Gaps = 22/302 (7%)
Query: 19 IALVSVPGNVLVIWAVKVNQALRDA-TFCFIVSLAVADVAVGALVIPLAILINIGPQTYF 77
+ L+++ GN+LV+ AV ++ LR T FIVSLA AD+ V LV+P + + +
Sbjct: 29 VILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQDIWIY 88
Query: 78 HT--CLMVACPVLILTQSSILALLAIAVDRYLRVKI-PLRYKMVVTPRRAAVAIAGCWIL 134
CL+ ++LT +SI L I++DRY + PL Y+ +TP R A+ + GCW++
Sbjct: 89 GEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALMLGGCWVI 148
Query: 135 -SFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMVYFNFFVWVLPPL 193
+F+ L M GWNN+ ++ + C F +++ Y + + + + P
Sbjct: 149 PTFISFLPIMQGWNNIGIIDLIEKRKFNQNSNSTYCVF--MVNKPYAITCSVVAFYI-PF 205
Query: 194 LLMVLIYLEVFYLIR------KQLNKKVSASSGDPQK-------YYGKELKIAKSLALIL 240
LLMVL Y ++ + + L + ++S PQ E K AK+L +I+
Sbjct: 206 LLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRPQSADQHSTHRMRTETKAAKTLCIIM 265
Query: 241 FLFALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFL 300
F L W P + N + F + T ++L + NS +NP +YAF + FR FL
Sbjct: 266 GCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAF-LWLGYINSGLNPFLYAFLNKSFRRAFL 324
Query: 301 KI 302
I
Sbjct: 325 II 326
>gi|111118990 alpha-1A-adrenergic receptor isoform 4 [Homo sapiens]
Length = 455
Score = 112 bits (281), Expect = 3e-25
Identities = 85/346 (24%), Positives = 156/346 (45%), Gaps = 52/346 (15%)
Query: 2 PPSISAFQAAYIGIEVL-IALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGA 60
P ++ +A +G+ + + L V GN+LVI +V ++ L T +IV+LAVAD+ + +
Sbjct: 18 PAPVNISKAILLGVILGGLILFGVLGNILVILSVACHRHLHSVTHYYIVNLAVADLLLTS 77
Query: 61 LVIPLAILINIGPQTYFHT--CLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMV 118
V+P + + + F C + A ++ +SI+ L I++DRY+ V PLRY +
Sbjct: 78 TVLPFSAIFEVLGYWAFGRVFCNIWAAVDVLCCTASIMGLCIISIDRYIGVSYPLRYPTI 137
Query: 119 VTPRRAAVAIAGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISME 178
VT RR +A+ W LS V+ + P+FGW + E C+ +
Sbjct: 138 VTQRRGLMALLCVWALSLVISIGPLFGWRQPAP------------EDETICQINE--EPG 183
Query: 179 YMVYFNFFVWVLPPLLLMVLIYLEVFYLIRKQ---LNKKVSASSGDPQKY---------- 225
Y+++ + L PL +++++Y V+ + +++ L + D ++
Sbjct: 184 YVLFSALGSFYL-PLAIILVMYCRVYVVAKRESRGLKSGLKTDKSDSEQVTLRIHRKNAP 242
Query: 226 ---------------------YGKELKIAKSLALILFLFALSWLPLHILNCITLFCPSCH 264
+ +E K AK+L +++ F L WLP ++ I F P
Sbjct: 243 AGGSGMASAKTKTHFSVRLLKFSREKKAAKTLGIVVGCFVLCWLPFFLVMPIGSFFPDFK 302
Query: 265 KPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFLKIWNDHFRCQ 310
+ I +L + NS +NPI+Y Q+F+ F + C+
Sbjct: 303 PSETVFKIVFWLGYLNSCINPIIYPCSSQEFKKAFQNVLRIQCLCR 348
>gi|111118992 alpha-1A-adrenergic receptor isoform 1 [Homo sapiens]
Length = 466
Score = 112 bits (281), Expect = 3e-25
Identities = 85/346 (24%), Positives = 156/346 (45%), Gaps = 52/346 (15%)
Query: 2 PPSISAFQAAYIGIEVL-IALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGA 60
P ++ +A +G+ + + L V GN+LVI +V ++ L T +IV+LAVAD+ + +
Sbjct: 18 PAPVNISKAILLGVILGGLILFGVLGNILVILSVACHRHLHSVTHYYIVNLAVADLLLTS 77
Query: 61 LVIPLAILINIGPQTYFHT--CLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMV 118
V+P + + + F C + A ++ +SI+ L I++DRY+ V PLRY +
Sbjct: 78 TVLPFSAIFEVLGYWAFGRVFCNIWAAVDVLCCTASIMGLCIISIDRYIGVSYPLRYPTI 137
Query: 119 VTPRRAAVAIAGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISME 178
VT RR +A+ W LS V+ + P+FGW + E C+ +
Sbjct: 138 VTQRRGLMALLCVWALSLVISIGPLFGWRQPAP------------EDETICQINE--EPG 183
Query: 179 YMVYFNFFVWVLPPLLLMVLIYLEVFYLIRKQ---LNKKVSASSGDPQKY---------- 225
Y+++ + L PL +++++Y V+ + +++ L + D ++
Sbjct: 184 YVLFSALGSFYL-PLAIILVMYCRVYVVAKRESRGLKSGLKTDKSDSEQVTLRIHRKNAP 242
Query: 226 ---------------------YGKELKIAKSLALILFLFALSWLPLHILNCITLFCPSCH 264
+ +E K AK+L +++ F L WLP ++ I F P
Sbjct: 243 AGGSGMASAKTKTHFSVRLLKFSREKKAAKTLGIVVGCFVLCWLPFFLVMPIGSFFPDFK 302
Query: 265 KPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFLKIWNDHFRCQ 310
+ I +L + NS +NPI+Y Q+F+ F + C+
Sbjct: 303 PSETVFKIVFWLGYLNSCINPIIYPCSSQEFKKAFQNVLRIQCLCR 348
>gi|111118986 alpha-1A-adrenergic receptor isoform 2 [Homo sapiens]
Length = 475
Score = 112 bits (281), Expect = 3e-25
Identities = 85/346 (24%), Positives = 156/346 (45%), Gaps = 52/346 (15%)
Query: 2 PPSISAFQAAYIGIEVL-IALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGA 60
P ++ +A +G+ + + L V GN+LVI +V ++ L T +IV+LAVAD+ + +
Sbjct: 18 PAPVNISKAILLGVILGGLILFGVLGNILVILSVACHRHLHSVTHYYIVNLAVADLLLTS 77
Query: 61 LVIPLAILINIGPQTYFHT--CLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMV 118
V+P + + + F C + A ++ +SI+ L I++DRY+ V PLRY +
Sbjct: 78 TVLPFSAIFEVLGYWAFGRVFCNIWAAVDVLCCTASIMGLCIISIDRYIGVSYPLRYPTI 137
Query: 119 VTPRRAAVAIAGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISME 178
VT RR +A+ W LS V+ + P+FGW + E C+ +
Sbjct: 138 VTQRRGLMALLCVWALSLVISIGPLFGWRQPAP------------EDETICQINE--EPG 183
Query: 179 YMVYFNFFVWVLPPLLLMVLIYLEVFYLIRKQ---LNKKVSASSGDPQKY---------- 225
Y+++ + L PL +++++Y V+ + +++ L + D ++
Sbjct: 184 YVLFSALGSFYL-PLAIILVMYCRVYVVAKRESRGLKSGLKTDKSDSEQVTLRIHRKNAP 242
Query: 226 ---------------------YGKELKIAKSLALILFLFALSWLPLHILNCITLFCPSCH 264
+ +E K AK+L +++ F L WLP ++ I F P
Sbjct: 243 AGGSGMASAKTKTHFSVRLLKFSREKKAAKTLGIVVGCFVLCWLPFFLVMPIGSFFPDFK 302
Query: 265 KPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFLKIWNDHFRCQ 310
+ I +L + NS +NPI+Y Q+F+ F + C+
Sbjct: 303 PSETVFKIVFWLGYLNSCINPIIYPCSSQEFKKAFQNVLRIQCLCR 348
>gi|111118988 alpha-1A-adrenergic receptor isoform 3 [Homo sapiens]
Length = 429
Score = 112 bits (281), Expect = 3e-25
Identities = 85/346 (24%), Positives = 156/346 (45%), Gaps = 52/346 (15%)
Query: 2 PPSISAFQAAYIGIEVL-IALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGA 60
P ++ +A +G+ + + L V GN+LVI +V ++ L T +IV+LAVAD+ + +
Sbjct: 18 PAPVNISKAILLGVILGGLILFGVLGNILVILSVACHRHLHSVTHYYIVNLAVADLLLTS 77
Query: 61 LVIPLAILINIGPQTYFHT--CLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMV 118
V+P + + + F C + A ++ +SI+ L I++DRY+ V PLRY +
Sbjct: 78 TVLPFSAIFEVLGYWAFGRVFCNIWAAVDVLCCTASIMGLCIISIDRYIGVSYPLRYPTI 137
Query: 119 VTPRRAAVAIAGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISME 178
VT RR +A+ W LS V+ + P+FGW + E C+ +
Sbjct: 138 VTQRRGLMALLCVWALSLVISIGPLFGWRQPAP------------EDETICQINE--EPG 183
Query: 179 YMVYFNFFVWVLPPLLLMVLIYLEVFYLIRKQ---LNKKVSASSGDPQKY---------- 225
Y+++ + L PL +++++Y V+ + +++ L + D ++
Sbjct: 184 YVLFSALGSFYL-PLAIILVMYCRVYVVAKRESRGLKSGLKTDKSDSEQVTLRIHRKNAP 242
Query: 226 ---------------------YGKELKIAKSLALILFLFALSWLPLHILNCITLFCPSCH 264
+ +E K AK+L +++ F L WLP ++ I F P
Sbjct: 243 AGGSGMASAKTKTHFSVRLLKFSREKKAAKTLGIVVGCFVLCWLPFFLVMPIGSFFPDFK 302
Query: 265 KPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFLKIWNDHFRCQ 310
+ I +L + NS +NPI+Y Q+F+ F + C+
Sbjct: 303 PSETVFKIVFWLGYLNSCINPIIYPCSSQEFKKAFQNVLRIQCLCR 348
>gi|4501959 alpha-1B-adrenergic receptor [Homo sapiens]
Length = 520
Score = 109 bits (273), Expect = 3e-24
Identities = 85/342 (24%), Positives = 157/342 (45%), Gaps = 59/342 (17%)
Query: 3 PSISAFQAAYIGIEV-LIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGAL 61
P + +A +G+ + L ++ GN+LVI +V N+ LR T FIV+LA+AD+ +
Sbjct: 38 PQLDITRAISVGLVLGAFILFAIVGNILVILSVACNRHLRTPTNYFIVNLAMADLLLSFT 97
Query: 62 VIPLAILINIGPQTYFHT--CLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVV 119
V+P + + + C + A ++ +SIL+L AI++DRY+ V+ L+Y +V
Sbjct: 98 VLPFSAALEVLGYWVLGRIFCDIWAAVDVLCCTASILSLCAISIDRYIGVRYSLQYPTLV 157
Query: 120 TPRRAAVAIAGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISME- 178
T R+A +A+ W+LS V+ + P+ GW EP + E ++ E
Sbjct: 158 TRRKAILALLSVWVLSTVISIGPLLGWK----------------EPAPNDDKECGVTEEP 201
Query: 179 YMVYFNFFVWVLPPLLLMVLIYLEVFYLIRKQLNKKV----------------------- 215
+ F+ PL +++++Y V Y++ K+ K +
Sbjct: 202 FYALFSSLGSFYIPLAVILVMYCRV-YIVAKRTTKNLEAGVMKEMSNSKELTLRIHSKNF 260
Query: 216 --------SASSGDPQK-------YYGKELKIAKSLALILFLFALSWLPLHILNCITLFC 260
A +P+ + +E K AK+L +++ +F L WLP I +
Sbjct: 261 HEDTLSSTKAKGHNPRSSIAVKLFKFSREKKAAKTLGIVVGMFILCWLPFFIALPLGSLF 320
Query: 261 PSCHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTFLKI 302
+ P + + +L + NS +NPI+Y ++F+ F++I
Sbjct: 321 STLKPPDAVFKVVFWLGYFNSCLNPIIYPCSSKEFKRAFVRI 362
>gi|4501957 alpha-1D-adrenergic receptor [Homo sapiens]
Length = 572
Score = 108 bits (271), Expect = 5e-24
Identities = 96/346 (27%), Positives = 162/346 (46%), Gaps = 70/346 (20%)
Query: 13 IGIEVLIA---LVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIPLAILI 69
+G+ V +A L++V GN+LVI +V N+ L+ T FIV+LAVAD+ + A V+P + +
Sbjct: 97 VGVGVFLAAFILMAVAGNLLVILSVACNRHLQTVTNYFIVNLAVADLLLSATVLPFSATM 156
Query: 70 NIGPQTYFHT--CLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVTPRRAAVA 127
+ F C + A ++ +SIL+L I+VDRY+ V+ L+Y ++T R+AA
Sbjct: 157 EVLGFWAFGRAFCDVWAAVDVLCCTASILSLCTISVDRYVGVRHSLKYPAIMTERKAAAI 216
Query: 128 IAGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISME--YMVYFNF 185
+A W+++ VV + P+ GW EPV E I+ E Y V+ +
Sbjct: 217 LALLWVVALVVSVGPLLGWK----------------EPVPPDERFCGITEEAGYAVFSSV 260
Query: 186 FVWVLPPLLLMVLIYLEVFYLIR---KQLNKKVSASSGDPQKY----------------- 225
+ L P+ ++V++Y V+ + R + L V G +
Sbjct: 261 CSFYL-PMAVIVVMYCRVYVVARSTTRSLEAGVKRERGKASEVVLRIHCRGAATGADGAH 319
Query: 226 --------------------YGKELKIAKSLALILFLFALSWLPLHILNCITLFCPSCHK 265
+ +E K AK+LA+++ +F L W P + + P K
Sbjct: 320 GMRSAKGHTFRSSLSVRLLKFSREKKAAKTLAIVVGVFVLCWFPFFFVLPLGSLFPQL-K 378
Query: 266 PSILTYIAIF-LTHGNSAMNPIVYAFRIQKFRVTFLKIWNDHFRCQ 310
PS + IF L + NS +NP++Y ++F+ FL++ RCQ
Sbjct: 379 PSEGVFKVIFWLGYFNSCVNPLIYPCSSREFKRAFLRL----LRCQ 420
>gi|4504541 5-hydroxytryptamine (serotonin) receptor 2C [Homo
sapiens]
Length = 458
Score = 107 bits (267), Expect = 1e-23
Identities = 88/351 (25%), Positives = 159/351 (45%), Gaps = 68/351 (19%)
Query: 17 VLIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIPLAILINIGPQTY 76
V+I ++++ GN+LVI AV + + L +AT F++SLA+AD+ VG LV+PL++L + Y
Sbjct: 61 VIIIIMTIGGNILVIMAVSMEKKLHNATNYFLMSLAIADMLVGLLVMPLSLLAIL--YDY 118
Query: 77 FHTCLMVACPV-----LILTQSSILALLAIAVDRYLRVKIPLRYKMVVTPRRAAVAIAGC 131
CPV ++ + +SI+ L AI++DRY+ ++ P+ + + +A + IA
Sbjct: 119 VWPLPRYLCPVWISLDVLFSTASIMHLCAISLDRYVAIRNPIEHSRFNSRTKAIMKIAIV 178
Query: 132 WILSFVVGL-TPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMVYFNFFVWVL 190
W +S V + P+ G L E+ + N + V++ V FV
Sbjct: 179 WAISIGVSVPIPVIG---LRDEEKVFVNNTTC-----------VLNDPNFVLIGSFVAFF 224
Query: 191 PPLLLMVLIYLEVFYLIRKQL------------------------NKKVSASSGDP---- 222
PL +MV+ Y Y++R+Q N +S +P
Sbjct: 225 IPLTIMVITYCLTIYVLRRQALMLLHGHTEEPPGLSLDFLKCCKRNTAEEENSANPNQDQ 284
Query: 223 ---------------QKYYGKELKIAKSLALILFLFALSWLPLHILNCITLFC-PSCHKP 266
+ E K +K L ++ F+F + W P I N +++ C SC++
Sbjct: 285 NARRRKKKERRPRGTMQAINNERKASKVLGIVFFVFLIMWCPFFITNILSVLCEKSCNQK 344
Query: 267 SILTYIAIFLTHGN--SAMNPIVYAFRIQKFRVTFLKIWNDHFRCQPAPPI 315
+ + +F+ G S +NP+VY + +R F +++ + PP+
Sbjct: 345 LMEKLLNVFVWIGYVCSGINPLVYTLFNKIYRRAFSNYLRCNYKVEKKPPV 395
>gi|16950638 lysophosphatidic acid receptor 1 [Homo sapiens]
Length = 364
Score = 106 bits (265), Expect = 2e-23
Identities = 80/296 (27%), Positives = 142/296 (47%), Gaps = 29/296 (9%)
Query: 13 IGIEVLIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIPLAILINIG 72
+G+ + + + + N+LV+ A+ VN+ + + +LA AD G L + N G
Sbjct: 53 MGLGITVCIFIMLANLLVMVAIYVNRRFHFPIYYLMANLAAADFFAGLAYFYL--MFNTG 110
Query: 73 PQTY---FHTCLMVACPVLILTQSSILALLAIAVDRYLRV-KIPLRYKMVVTPRRAAVAI 128
P T T L+ + +S+ LLAIA++R++ V ++ L +M + RR V I
Sbjct: 111 PNTRRLTVSTWLLRQGLIDTSLTASVANLLAIAIERHITVFRMQLHTRM--SNRRVVVVI 168
Query: 129 AGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMVYFNFFVW 188
W ++ V+G P GWN + +E + S Y+V++ F
Sbjct: 169 VVIWTMAIVMGAIPSVGWNCICDIENC-------------SNMAPLYSDSYLVFWAIFNL 215
Query: 189 VLPPLLLMVLIYLEVFYLIRKQLNKKVSASSGDPQKYYGKELKIAKSLALILFLFALSWL 248
V ++MV++Y +F +R Q ++S S P++ + + K++ ++L F + W
Sbjct: 216 VT--FVVMVVLYAHIFGYVR-QRTMRMSRHSSGPRRNRDTMMSLLKTVVIVLGAFIICWT 272
Query: 249 PLHILNCITLFCPSCHKPSILTYIAIF--LTHGNSAMNPIVYAFRIQKFRVTFLKI 302
P +L + + CP C +L Y F L NSAMNPI+Y++R ++ TF +I
Sbjct: 273 PGLVLLLLDVCCPQC---DVLAYEKFFLLLAEFNSAMNPIIYSYRDKEMSATFRQI 325
>gi|16950636 lysophosphatidic acid receptor 1 [Homo sapiens]
Length = 364
Score = 106 bits (265), Expect = 2e-23
Identities = 80/296 (27%), Positives = 142/296 (47%), Gaps = 29/296 (9%)
Query: 13 IGIEVLIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIPLAILINIG 72
+G+ + + + + N+LV+ A+ VN+ + + +LA AD G L + N G
Sbjct: 53 MGLGITVCIFIMLANLLVMVAIYVNRRFHFPIYYLMANLAAADFFAGLAYFYL--MFNTG 110
Query: 73 PQTY---FHTCLMVACPVLILTQSSILALLAIAVDRYLRV-KIPLRYKMVVTPRRAAVAI 128
P T T L+ + +S+ LLAIA++R++ V ++ L +M + RR V I
Sbjct: 111 PNTRRLTVSTWLLRQGLIDTSLTASVANLLAIAIERHITVFRMQLHTRM--SNRRVVVVI 168
Query: 129 AGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMVYFNFFVW 188
W ++ V+G P GWN + +E + S Y+V++ F
Sbjct: 169 VVIWTMAIVMGAIPSVGWNCICDIENC-------------SNMAPLYSDSYLVFWAIFNL 215
Query: 189 VLPPLLLMVLIYLEVFYLIRKQLNKKVSASSGDPQKYYGKELKIAKSLALILFLFALSWL 248
V ++MV++Y +F +R Q ++S S P++ + + K++ ++L F + W
Sbjct: 216 VT--FVVMVVLYAHIFGYVR-QRTMRMSRHSSGPRRNRDTMMSLLKTVVIVLGAFIICWT 272
Query: 249 PLHILNCITLFCPSCHKPSILTYIAIF--LTHGNSAMNPIVYAFRIQKFRVTFLKI 302
P +L + + CP C +L Y F L NSAMNPI+Y++R ++ TF +I
Sbjct: 273 PGLVLLLLDVCCPQC---DVLAYEKFFLLLAEFNSAMNPIIYSYRDKEMSATFRQI 325
>gi|4503391 dopamine receptor D5 [Homo sapiens]
Length = 477
Score = 104 bits (259), Expect = 1e-22
Identities = 92/354 (25%), Positives = 157/354 (44%), Gaps = 47/354 (13%)
Query: 3 PSISAFQAAYIGIEVLIALVSVPGNVLVIWAVKVNQALR-DATFCFIVSLAVADVAVGAL 61
P + Q + L+ + ++ GNVLV A+ ++ LR + T FIVSLAV+D+ V L
Sbjct: 34 PPLGPSQVVTACLLTLLIIWTLLGNVLVCAAIVRSRHLRANMTNVFIVSLAVSDLFVALL 93
Query: 62 VIPLAILINIGPQTYFHT-CLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVT 120
V+P + + F C + ++ + +SIL L I+VDRY + P RYK +T
Sbjct: 94 VMPWKAVAEVAGYWPFGAFCDVWVAFDIMCSTASILNLCVISVDRYWAISRPFRYKRKMT 153
Query: 121 PRRAAVAIAGCWILSFVVGLTPM-FGWNNLSAVERAWAA-------------NGSMGEPV 166
R A V + W LS ++ P+ W+ A +W EP
Sbjct: 154 QRMALVMVGLAWTLSILISFIPVQLNWHRDQAA--SWGGLDLPNNLANWTPWEEDFWEPD 211
Query: 167 IKCE-FEKVISMEYMVYFNFFVWVLPPLLLMVLIYLEVFYLIRKQLNKKVS--------- 216
+ E + ++ Y + + + + P+ +M++ Y ++ + + Q+ + S
Sbjct: 212 VNAENCDSSLNRTYAISSSLISFYI-PVAIMIVTYTRIYRIAQVQIRRISSLERAAEHAQ 270
Query: 217 --------ASSGDPQKYYGKELKIAKSLALILFLFALSWLPLHILNCITLFC------PS 262
A + KE K+ K+L++I+ +F WLP ILNC+ FC P
Sbjct: 271 SCRSSAACAPDTSLRASIKKETKVLKTLSVIMGVFVCCWLPFFILNCMVPFCSGHPEGPP 330
Query: 263 CHKPSIL-TYIAIFLTHG--NSAMNPIVYAFRIQKFRVTFLKIWNDHFRCQPAP 313
P + T +F+ G NS++NP++YAF F+ F ++ C P
Sbjct: 331 AGFPCVSETTFDVFVWFGWANSSLNPVIYAFNAD-FQKVFAQLLGCSHFCSRTP 383
>gi|4501969 adrenergic, beta-2-, receptor, surface [Homo sapiens]
Length = 413
Score = 102 bits (255), Expect = 4e-22
Identities = 93/311 (29%), Positives = 144/311 (46%), Gaps = 39/311 (12%)
Query: 18 LIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIPLA---ILINIGPQ 74
LI L V GNVLVI A+ + L+ T FI SLA AD+ +G V+P IL+ +
Sbjct: 42 LIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTF 101
Query: 75 TYFHTCLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVTPRRAAVAIAGCWIL 134
F + VL +T +SI L IAVDRY + P +Y+ ++T +A V I WI+
Sbjct: 102 GNFWCEFWTSIDVLCVT-ASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIV 160
Query: 135 SFVVGLTPM-FGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMVYFNFFVWVLPPL 193
S + P+ W + E A N E C+F + + + V PL
Sbjct: 161 SGLTSFLPIQMHWYRATHQE---AINCYANETC--CDF---FTNQAYAIASSIVSFYVPL 212
Query: 194 LLMVLIYLEVFYLIRKQLNKKVSASSG---------------------DPQKYYGKELKI 232
++MV +Y VF ++QL +K+ S G K+ KE K
Sbjct: 213 VIMVFVYSRVFQEAKRQL-QKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKFCLKEHKA 271
Query: 233 AKSLALILFLFALSWLPLHILNCITLFCPSCHKPSILTYIAI-FLTHGNSAMNPIVYAFR 291
K+L +I+ F L WLP I+N + + + + + YI + ++ + NS NP++Y R
Sbjct: 272 LKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEV--YILLNWIGYVNSGFNPLIYC-R 328
Query: 292 IQKFRVTFLKI 302
FR+ F ++
Sbjct: 329 SPDFRIAFQEL 339
>gi|222080095 orexin receptor 1 [Homo sapiens]
Length = 425
Score = 102 bits (254), Expect = 5e-22
Identities = 97/329 (29%), Positives = 148/329 (44%), Gaps = 49/329 (14%)
Query: 10 AAYIGIEVLIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIPLAILI 69
AAY+ + V V++ GN LV AV N +R T FIV+L++ADV V A+ +P ++L+
Sbjct: 51 AAYVAVFV----VALVGNTLVCLAVWRNHHMRTVTNYFIVNLSLADVLVTAICLPASLLV 106
Query: 70 NIGPQTYFHTCLMVACPVL--ILTQSSILALLAIAVDRYLRVKIPLRYKMVVTPRRAAVA 127
+I F L P L + ++L L IA+DR+ + PL +K T RRA +
Sbjct: 107 DITESWLFGHALCKVIPYLQAVSVSVAVLTLSFIALDRWYAICHPLLFKS--TARRARGS 164
Query: 128 IAGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMVYFN--F 185
I G W +S + + P S+V A + C+ + +Y + F
Sbjct: 165 ILGIWAVSLAI-MVPQAAVMECSSVLPELANRTRL---FSVCDERWADDLYPKIYHSCFF 220
Query: 186 FVWVLPPLLLMVLIYLEVF-------------YLIRK------QLNKKVSASSGDPQ--- 223
V L PL LM + Y ++F L+R QL SG+PQ
Sbjct: 221 IVTYLAPLGLMAMAYFQIFRKLWGRQIPGTTSALVRNWKRPSDQLGDLEQGLSGEPQPRA 280
Query: 224 -------KYYGKELKIAKSLALILFLFALSWLPLHILNCIT----LFCPSCHKPSILTYI 272
K K AK L ++L +FAL +LP+ +LN + +F + + ++
Sbjct: 281 RAFLAEVKQMRARRKTAKMLMVVLLVFALCYLPISVLNVLKRVFGMFRQASDREAVYACF 340
Query: 273 AI--FLTHGNSAMNPIVYAFRIQKFRVTF 299
+L + NSA NPI+Y F KFR F
Sbjct: 341 TFSHWLVYANSAANPIIYNFLSGKFREQF 369
>gi|4504545 5-hydroxytryptamine (serotonin) receptor 6 [Homo
sapiens]
Length = 440
Score = 100 bits (249), Expect = 2e-21
Identities = 81/309 (26%), Positives = 141/309 (45%), Gaps = 44/309 (14%)
Query: 17 VLIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIPLAILINIGPQTY 76
V+IAL + N L+I + ALR+ + F+VSL +D+ VG +V+P A+L + +
Sbjct: 35 VVIALTAA-ANSLLIALICTQPALRNTSNFFLVSLFTSDLMVGLVVMPPAMLNALYGRWV 93
Query: 77 FHT--CLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVTPRRAAVAIAGCWIL 134
CL+ ++ +SIL L I++DRYL + PLRYK+ +TP RA + G W L
Sbjct: 94 LARGLCLLWTAFDVMCCSASILNLCLISLDRYLLILSPLRYKLRMTPLRALALVLGAWSL 153
Query: 135 SFVVGLTP-MFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMVYFNFFVWVLPPL 193
+ + P + GW+ L P + + + S+ +++ + + LP
Sbjct: 154 AALASFLPLLLGWHEL-----------GHARPPVPGQCRLLASLPFVLVASGLTFFLPSG 202
Query: 194 LLMVLIYLEVFYLIRKQLNKKVSASSGDPQ--------------------------KYYG 227
+ Y + RKQ + S ++G K+
Sbjct: 203 AI-CFTYCRILLAARKQAVQVASLTTGMASQASETLQVPRTPRPGVESADSRRLATKHSR 261
Query: 228 KELKIAKSLALILFLFALSWLPLHILNCITLFCPSCHKPSILTYIAIFLTHGNSAMNPIV 287
K LK + +L ++L +F ++WLP + N + C C P + + +L + NS MNPI+
Sbjct: 262 KALKASLTLGILLGMFFVTWLPFFVANIVQAVC-DCISPGLFD-VLTWLGYCNSTMNPII 319
Query: 288 YAFRIQKFR 296
Y ++ F+
Sbjct: 320 YPLFMRDFK 328
>gi|5174535 melanocortin 5 receptor [Homo sapiens]
Length = 325
Score = 99.4 bits (246), Expect = 4e-21
Identities = 89/303 (29%), Positives = 143/303 (47%), Gaps = 44/303 (14%)
Query: 13 IGIEVLIAL--VSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGAL----VIPLA 66
I +EV + L +S+ N+LVI A+ N+ L + F+ SLAVAD+ V I +
Sbjct: 38 IAVEVFLTLGVISLLENILVIGAIVKNKNLHSPMYFFVCSLAVADMLVSMSSAWETITIY 97
Query: 67 ILIN----IGPQTYFHTCLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVTPR 122
+L N I H + + I +S+ +LLAIAVDRY+ + LRY ++T R
Sbjct: 98 LLNNKHLVIADAFVRHIDNVFDSMICISVVASMCSLLAIAVDRYVTIFYALRYHHIMTAR 157
Query: 123 RAAVAIAGCWILSFVVGLTPMFGWNNLSAVERAWAANGSMGEPVIKCEFEKVISMEYMVY 182
R+ IAG W +F G +F + S VI C +ISM + +
Sbjct: 158 RSGAIIAGIW--AFCTGCGIVFILYSESTY-------------VILC----LISMFFAML 198
Query: 183 FNFFVWVLPPLLLMVLIYLEVFYLIRKQLNKKVSASSGDPQKYYGKELKIAKSLALILFL 242
F L+V +Y+ +F L R + K+++A G ++ A ++ ++L +
Sbjct: 199 F-----------LLVSLYIHMFLLARTHV-KRIAALPGASSARQRTSMQGAVTVTMLLGV 246
Query: 243 FALSWLPLHILNCITLFCPS---CHKPSILTYIAIFLTHGNSAMNPIVYAFRIQKFRVTF 299
F + W P + + L CP C + + + L NS M+P++YAFR Q+ R TF
Sbjct: 247 FTVCWAPFFLHLTLMLSCPQNLYCSRFMSHFNMYLILIMCNSVMDPLIYAFRSQEMRKTF 306
Query: 300 LKI 302
+I
Sbjct: 307 KEI 309
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.329 0.142 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,650,330
Number of Sequences: 37866
Number of extensions: 433837
Number of successful extensions: 2979
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 242
Number of HSP's that attempted gapping in prelim test: 1458
Number of HSP's gapped (non-prelim): 967
length of query: 326
length of database: 18,247,518
effective HSP length: 103
effective length of query: 223
effective length of database: 14,347,320
effective search space: 3199452360
effective search space used: 3199452360
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.