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Search of human proteins with 219521826
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|219521826 zinc finger, BED-type containing 5 [Homo sapiens]
(693 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|219521826 zinc finger, BED-type containing 5 [Homo sapiens] 1374 0.0
gi|49574210 zinc finger, BED-type containing 5 [Homo sapiens] 1374 0.0
gi|46195755 SCAN domain containing 3 [Homo sapiens] 428 e-120
gi|115511046 zinc finger protein 258 [Homo sapiens] 365 e-101
gi|223633919 hypothetical protein LOC285550 [Homo sapiens] 347 2e-95
gi|28916698 transposon-derived Buster3 transposase-like [Homo sa... 346 4e-95
gi|21495178 hypothetical protein LOC221786 [Homo sapiens] 335 1e-91
gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens] 155 9e-38
gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens] 152 1e-36
gi|7662294 EPM2A interacting protein 1 [Homo sapiens] 113 5e-25
gi|55741653 hypothetical protein LOC57691 [Homo sapiens] 37 0.047
gi|109148531 coiled-coil domain containing 98 [Homo sapiens] 31 3.4
gi|54606888 hypothetical protein LOC23251 [Homo sapiens] 30 5.8
gi|38570115 zinc finger protein 362 [Homo sapiens] 30 5.8
gi|118498362 kinectin 1 isoform b [Homo sapiens] 30 7.5
gi|118498356 kinectin 1 isoform a [Homo sapiens] 30 7.5
gi|118498368 kinectin 1 isoform c [Homo sapiens] 30 7.5
gi|33620775 kinectin 1 isoform a [Homo sapiens] 30 7.5
gi|24429588 zinc finger protein 532 [Homo sapiens] 30 7.5
gi|119964718 desmoglein 3 preproprotein [Homo sapiens] 30 9.8
>gi|219521826 zinc finger, BED-type containing 5 [Homo sapiens]
Length = 693
Score = 1374 bits (3556), Expect = 0.0
Identities = 693/693 (100%), Positives = 693/693 (100%)
Query: 1 MIAPLLCILSYNFNTFAILNVYSKLTMFCTTNSLPMDLLLKQGSLKQEVESFCYQIVSES 60
MIAPLLCILSYNFNTFAILNVYSKLTMFCTTNSLPMDLLLKQGSLKQEVESFCYQIVSES
Sbjct: 1 MIAPLLCILSYNFNTFAILNVYSKLTMFCTTNSLPMDLLLKQGSLKQEVESFCYQIVSES 60
Query: 61 NDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKITFSKKPKRRKYDESYLSFGFT 120
NDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKITFSKKPKRRKYDESYLSFGFT
Sbjct: 61 NDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKITFSKKPKRRKYDESYLSFGFT 120
Query: 121 YFGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKDISFFKQHLDSPENNKP 180
YFGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKDISFFKQHLDSPENNKP
Sbjct: 121 YFGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKDISFFKQHLDSPENNKP 180
Query: 181 PTPKIVNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDA 240
PTPKIVNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDA
Sbjct: 181 PTPKIVNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDA 240
Query: 241 VQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVRYRFNKS 300
VQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVRYRFNKS
Sbjct: 241 VQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVRYRFNKS 300
Query: 301 IEEDLLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLI 360
IEEDLLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLI
Sbjct: 301 IEEDLLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLI 360
Query: 361 KYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMG 420
KYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMG
Sbjct: 361 KYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMG 420
Query: 421 AQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADI 480
AQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADI
Sbjct: 421 AQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADI 480
Query: 481 FTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTEINST 540
FTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTEINST
Sbjct: 481 FTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTEINST 540
Query: 541 VDKDICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASLVARDYESLIDLTS 600
VDKDICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASLVARDYESLIDLTS
Sbjct: 541 VDKDICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASLVARDYESLIDLTS 600
Query: 601 DSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRK 660
DSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRK
Sbjct: 601 DSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRK 660
Query: 661 RLDAAPHMRIRLSNITPNIKRICDKKTQKHCSH 693
RLDAAPHMRIRLSNITPNIKRICDKKTQKHCSH
Sbjct: 661 RLDAAPHMRIRLSNITPNIKRICDKKTQKHCSH 693
>gi|49574210 zinc finger, BED-type containing 5 [Homo sapiens]
Length = 693
Score = 1374 bits (3556), Expect = 0.0
Identities = 693/693 (100%), Positives = 693/693 (100%)
Query: 1 MIAPLLCILSYNFNTFAILNVYSKLTMFCTTNSLPMDLLLKQGSLKQEVESFCYQIVSES 60
MIAPLLCILSYNFNTFAILNVYSKLTMFCTTNSLPMDLLLKQGSLKQEVESFCYQIVSES
Sbjct: 1 MIAPLLCILSYNFNTFAILNVYSKLTMFCTTNSLPMDLLLKQGSLKQEVESFCYQIVSES 60
Query: 61 NDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKITFSKKPKRRKYDESYLSFGFT 120
NDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKITFSKKPKRRKYDESYLSFGFT
Sbjct: 61 NDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKITFSKKPKRRKYDESYLSFGFT 120
Query: 121 YFGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKDISFFKQHLDSPENNKP 180
YFGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKDISFFKQHLDSPENNKP
Sbjct: 121 YFGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKDISFFKQHLDSPENNKP 180
Query: 181 PTPKIVNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDA 240
PTPKIVNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDA
Sbjct: 181 PTPKIVNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDA 240
Query: 241 VQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVRYRFNKS 300
VQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVRYRFNKS
Sbjct: 241 VQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVRYRFNKS 300
Query: 301 IEEDLLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLI 360
IEEDLLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLI
Sbjct: 301 IEEDLLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLI 360
Query: 361 KYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMG 420
KYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMG
Sbjct: 361 KYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMG 420
Query: 421 AQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADI 480
AQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADI
Sbjct: 421 AQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADI 480
Query: 481 FTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTEINST 540
FTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTEINST
Sbjct: 481 FTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTEINST 540
Query: 541 VDKDICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASLVARDYESLIDLTS 600
VDKDICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASLVARDYESLIDLTS
Sbjct: 541 VDKDICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASLVARDYESLIDLTS 600
Query: 601 DSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRK 660
DSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRK
Sbjct: 601 DSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRK 660
Query: 661 RLDAAPHMRIRLSNITPNIKRICDKKTQKHCSH 693
RLDAAPHMRIRLSNITPNIKRICDKKTQKHCSH
Sbjct: 661 RLDAAPHMRIRLSNITPNIKRICDKKTQKHCSH 693
>gi|46195755 SCAN domain containing 3 [Homo sapiens]
Length = 1325
Score = 428 bits (1101), Expect = e-120
Identities = 242/645 (37%), Positives = 376/645 (58%), Gaps = 17/645 (2%)
Query: 64 KVGILQSEDKQLQPSVSKK---SEGELSRVKFISNSNKITFSKKPK-----RRKYDESYL 115
KVG ++ L V K+ SE S + ++N + K + RKYD SY+
Sbjct: 683 KVGDWMAKQASLDFFVKKRHAFSEHSSSNKRNVNNRSYPEEGKTKRVHASFTRKYDPSYI 742
Query: 116 SFGFTYFGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKDISFFKQHLDSP 175
FGF + + QC++C +L+N ++ PSKL+RHL +KH + FF++ S
Sbjct: 743 EFGFVAVIDGEVLKPQCIICGDVLANEAMKPSKLKRHLYSKHKEISSQPKEFFERK-SSE 801
Query: 176 ENNKPPTPKIVNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYS 235
++P V+ N SA ASY V+ +A S +TI E L+K C K+V + M E +
Sbjct: 802 LKSQPKQVFNVSHINISALRASYKVALPVAKSKTPYTIAETLVKDCIKEVCLEMLGESAA 861
Query: 236 KKIDAVQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVRY 295
KK+ V LSN T+ARRI++LA D+E++L+ ++K+ FSLQLDE D++ + +LLV+VR+
Sbjct: 862 KKVAQVPLSNDTIARRIQELANDMEDQLIEQIKLAKYFSLQLDECRDIANMIILLVYVRF 921
Query: 296 RFNKSIEEDLLLCESLQSNATGEEIFNCINSFM-QKHEIEWEKCVDVCSDASRAVDGKIA 354
+ I+E+ SL +N T E++ + +++ K +E++ CV VCSD + ++ GK +
Sbjct: 922 EHDDDIKEEFFFSASLPTNTTSSELYEAVKNYIVNKCGLEFKFCVGVCSDGAASMTGKHS 981
Query: 355 EAVTLIKYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKI 414
E VT IK +APE ++HC ++R +LA+K + L +VL+ V+I+NYIK+ SRL +
Sbjct: 982 EVVTQIKELAPECKTTHCFIHRESLAMKKISAELNSVLNDIVKIVNYIKSNSLNSRLFSL 1041
Query: 415 LCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRL-SDCLTNSSWLLR 473
LC+ M A H LLL+ E+RWLSRGKVL R+FE+R ELLVF+ + S + +W R
Sbjct: 1042 LCDNMEADHKQLLLHAEIRWLSRGKVLSRMFEIRNELLVFLQGKKPMWSQLFKDVNWTAR 1101
Query: 474 LAYLADIFTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDF 533
LAYL+DIF+ N++N SMQGKN T F++ DK+ +KLE W + + + +D F L+
Sbjct: 1102 LAYLSDIFSIFNDLNASMQGKNATYFSMADKVEGQKQKLEAWKNRISTDCYDMFHNLTTI 1161
Query: 534 LTEINSTVD-KDICSAIVQHLRGLRATLLKYFPVTND---NNAWVRNPFTVTVKPASLVA 589
+ E+ + +D + I +HL L YFP D N W++NPF + +L
Sbjct: 1162 INEVGNDLDIAHLRKVISEHLTNLLECFEFYFPSKEDPRIGNLWIQNPFLSSKDNLNLTV 1221
Query: 590 RDYESLIDLTSDSQVKQNF-SELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGF 648
+ L+ L +D +K +F + SL FW +YP +A A+++LL F + +LCETGF
Sbjct: 1222 TLQDKLLKLATDEGLKISFENTASLPSFWIKAKNDYPELAEIALKLLLLFPSTYLCETGF 1281
Query: 649 SYYAATKTKYRKRLDAAPHMRIRLSNITPNIKRICDKKTQKHCSH 693
S + KTK+R L+ +R+ LS+I P + ++ KK Q H SH
Sbjct: 1282 STLSVIKTKHRNSLNIHYPLRVALSSIQPRLDKLTSKK-QAHLSH 1325
>gi|115511046 zinc finger protein 258 [Homo sapiens]
Length = 1325
Score = 365 bits (938), Expect = e-101
Identities = 202/611 (33%), Positives = 347/611 (56%), Gaps = 25/611 (4%)
Query: 94 SNSNKITFSKKPKRRK-------YDESYLSFGFTYF--GNRDAPHAQCVLCKKILSNSSL 144
+ N P ++K YD YL GF +P QCV+C +ILS+ ++
Sbjct: 721 NEKNDAELDSPPSKKKRLGFFQTYDTEYLKVGFIICPGSKESSPRPQCVICGEILSSENM 780
Query: 145 APSKLRRHLETKHAAYKDKDISFFKQHLDSPENNKPPTPKIVNTDNESATEASYNVSYHI 204
P+ L HL+TKH+ ++K + FF+Q E K + + +S +ASY +++
Sbjct: 781 KPANLSHHLKTKHSELENKPVDFFEQKSLEMECQNSSLKKCLLVE-KSLVKASYLIAFQT 839
Query: 205 ALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDAVQLSNSTVARRIKDLAADIEEELV 264
A S + +I E LIKP ++ + K+ + LSN T+ RI +L+ADIE++L+
Sbjct: 840 AASKKPFSIAEELIKPYLVEMCSEVLGSSAGDKMKTIPLSNVTIQHRIDELSADIEDQLI 899
Query: 265 CRLKICDGFSLQLDESADVSGLAVLLVFVRYRFN--KSIEEDLLLCESLQSNATGEEIFN 322
+++ F+LQ+DES+++S + +LL ++R+ + ++E+LL C + + TG EIF
Sbjct: 900 QKVRESKWFALQIDESSEISNITLLLCYIRFIDYDCRDVKEELLFCIEMPTQITGFEIFE 959
Query: 323 CINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLIKYVAPESTS-SHCLLYRHALAV 381
IN ++ + W+ CV +C+D + ++ G+ + I+ VA + + +HC ++R L
Sbjct: 960 LINKYIDSKSLNWKHCVGLCTDGAASMTGRYSGLKAKIQEVAMNTAAFTHCFIHRERLVA 1019
Query: 382 KIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMGAQHTALLLNTEVRWLSRGKVL 441
+ + L +L Q+ QI+++IK+ SR+L ILCEEMG++H +L L+ EVRW+SRG++L
Sbjct: 1020 EKLSPCLHKILLQSAQILSFIKSNALNSRMLTILCEEMGSEHVSLPLHAEVRWISRGRML 1079
Query: 442 VRLFELRRELLVFMDSAFR-LSDCLTNSSWLLRLAYLADIFTKLNEVNLSMQGKNVTVFT 500
RLFELR E+ +F+ L+ + W+ +LAYL+DIF+ +NE+NLS+QG T F
Sbjct: 1080 KRLFELRHEIEIFLSQKHSDLAKYFHDEEWVGKLAYLSDIFSLINELNLSLQGTLTTFFN 1139
Query: 501 VFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTE--INSTVDKDICSAIVQHLRGLRA 558
+ +K+ RKL+ W +E ++D FP+ S+F +N T DI I +HL GL
Sbjct: 1140 LCNKIDVFKRKLKMWLKRTQENDYDMFPSFSEFSNSSGLNMT---DITRIIFEHLEGLSQ 1196
Query: 559 TLLKYFPVTND---NNAWVRNPFTVTVKPASLVARDYESLIDLTSDSQVKQNFSELSLND 615
FP D N W+ +PF + + +L + E L +L+SD ++ F +S+
Sbjct: 1197 VFSDCFPPEQDLRSGNLWIIHPF-MNHQNNNLTDFEEEKLTELSSDLGLQALFKSVSVTQ 1255
Query: 616 FWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRKRLDAAPHMRIRLSNI 675
FW + YP + RA++ LLPF+T++LC+ FS A T++K + L + P +R+ ++++
Sbjct: 1256 FWINAKTSYPELHERAMKFLLPFSTVYLCDAAFS--ALTESKQKNLLGSGPALRLAVTSL 1313
Query: 676 TPNIKRICDKK 686
P I+++ +K
Sbjct: 1314 IPRIEKLVKEK 1324
>gi|223633919 hypothetical protein LOC285550 [Homo sapiens]
Length = 657
Score = 347 bits (891), Expect = 2e-95
Identities = 209/605 (34%), Positives = 340/605 (56%), Gaps = 28/605 (4%)
Query: 103 KKPKRRKYDESYLSFGFTY----FGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHA 158
KK R+Y+E YL +GF F N D P QCV+C IL+N SL PSKL+RHLET+HA
Sbjct: 56 KKVSARRYNEDYLKYGFIKCEKPFEN-DRP--QCVICNNILANESLKPSKLKRHLETQHA 112
Query: 159 AYKDKDISFFKQHLDSPENNKPPTPKIVNTD--NESATEASYNVSYHIALSGEAHTIGEL 216
DK + +F++ ++ K T + + +E A +SY V+Y +A A+T E
Sbjct: 113 ELIDKPLEYFQR---KKKDIKLSTQFLSCSTAVSEKALLSSYLVAYRVAKEKIANTAAEK 169
Query: 217 LIKPCAKDVVMRMFDEQYSKKIDAVQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQ 276
+I P D+V +FD++ + K+ + N TV+ RI +A +E L+ RL+ F++Q
Sbjct: 170 IILPACLDMVRTIFDDKSADKLKTIPNDN-TVSLRICTIAEHLETMLITRLQSGIDFAIQ 228
Query: 277 LDESADVSGLAVLLVFVRYRFNKSIEEDLLLCESLQSNATGEEIFNCINS-FMQKHEIEW 335
LDES D+ LLV+VRY + ED L +L S+ +G +IF + + ++++ W
Sbjct: 229 LDESTDIGSCTTLLVYVRYAWQDDFLEDFLCFLNLTSHLSGLDIFTELERRIVGQYKLNW 288
Query: 336 EKCVDVCSDASRAVDGKIAEAVT-LIKYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQ 394
+ C + SD + + GK + + L++ + +HC ++R LA + +P +L VL
Sbjct: 289 KNCKGITSDGTATMTGKHSRVIKKLLEVTNNGAVWNHCFIHREGLASREIPQNLMEVLKN 348
Query: 395 AVQIINYIKARPHQSRLLKILCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVF 454
AV+++N+IK SRLL+ C E+G HT LL +T++RWLS+GK+L R++ELR E+ F
Sbjct: 349 AVKVVNFIKGSSLNSRLLETFCSEIGTNHTHLLYHTKIRWLSQGKILSRVYELRNEIHFF 408
Query: 455 M-DSAFRLSDCLTNSSWLLRLAYLADIFTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLE 513
+ + L+ + +W+ +LAYL DIF+ LNE++L +QGKN VF +++ + L
Sbjct: 409 LIEKKSHLASIFEDDTWVTKLAYLTDIFSILNELSLKLQGKNSDVFQHVERIQGFRKTLL 468
Query: 514 FWASSVEEE--NFDCFPTLSDFLTE--INSTVDKDICSAIVQHLRGLRATLLKYFP---- 565
W ++ ++ FP + E IN + K+I I+ HL L T +FP
Sbjct: 469 LWQVRLKSNRPSYYMFPRFLQHIEENIINENILKEIKLEILLHLTSLSQTFNHFFPEEKF 528
Query: 566 VTNDNNAWVRNPFTV----TVKPASLVARDYESLIDLTSDSQVKQNFSELSLNDFWSSLI 621
T N+WV++PF ++ +LV + L+ L+S +K ++ LSL+ FW +
Sbjct: 529 ETLRENSWVKDPFAFRHPESIIELNLVPEEENELLQLSSSYTLKNDYETLSLSAFWMKVK 588
Query: 622 QEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRKRLDAAPHMRIRLSNITPNIKR 681
+++P ++R++V +LLPF T LCE GFS KTK R L+ A MR+ LS+ P+
Sbjct: 589 EDFPLLSRKSVLLLLPFTTTSLCELGFSILTQLKTKERNGLNCAAVMRVALSSCVPDWNE 648
Query: 682 ICDKK 686
+ +++
Sbjct: 649 LMNRQ 653
>gi|28916698 transposon-derived Buster3 transposase-like [Homo
sapiens]
Length = 594
Score = 346 bits (888), Expect = 4e-95
Identities = 192/589 (32%), Positives = 311/589 (52%), Gaps = 9/589 (1%)
Query: 106 KRRKYDESYLSFGFTYFGNRDAPHA-QCVLCKKILSNSSLAPSKLRRHLETKHAAYKDKD 164
K+RK+D+ Y+ + FT D QCVLC + SN+ L PSKL H +H D
Sbjct: 3 KKRKWDDDYVRYWFTCTTEVDGTQRPQCVLCNSVFSNADLRPSKLSDHFNRQHGGVAGHD 62
Query: 165 ISFFKQHLDSPENNKPPTPKI-VNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAK 223
++ K H+ +P + V + ++ +ASY +Y A HT+ E L+KPCA
Sbjct: 63 LNSLK-HMPAPSDQSETLKAFGVASHEDTLLQASYQFAYLCAKEKNPHTVAEKLVKPCAL 121
Query: 224 DVVMRMFDEQYSKKIDAVQLSNSTVARRIKDLAADIEEELVCRLKICD-GFSLQLDESAD 282
++ + KK+ V LS+ + RI +++ DI ++++ +K +QL E+ D
Sbjct: 122 EIAQIVLGPDAQKKLQQVPLSDDVIHSRIDEMSQDILQQVLEDIKASPLKVGIQLAETTD 181
Query: 283 VSGLAVLLVFVRYRFNKSIEEDLLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVC 342
+ + L+ FVRY + I E+ L CE LQ + G ++FN F KH+I + C VC
Sbjct: 182 MDDCSQLMAFVRYIKEREIVEEFLFCEPLQLSMKGIDVFNLFRDFFLKHKIALDVCGSVC 241
Query: 343 SDASRAVDGKIAEAVTLIKYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYI 402
+D + ++ G+ +E V +K P +HCLL HAL +K +PT L++ L V++IN+I
Sbjct: 242 TDGASSMLGENSEFVAYVKKEIPHIVVTHCLLNPHALVIKTLPTKLRDALFTVVRVINFI 301
Query: 403 KARPHQSRLLKILCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFM-DSAFRL 461
K R RL + EE+G +++ LL +TE+RWLSRG++L +FE+ E+ F+ + L
Sbjct: 302 KGRAPNHRLFQAFFEEIGIEYSVLLFHTEMRWLSRGQILTHIFEMYEEINQFLHHKSSNL 361
Query: 462 SDCLTNSSWLLRLAYLADIFTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEE 521
D N + + LAYLAD+F LNE++ SMQ + + +K+S+ +RK FW +E+
Sbjct: 362 VDGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLSAFVRKFPFWQKRIEK 421
Query: 522 ENFDCFPTLSDFLTEINSTVDKDICSAIVQHLRGLRATLLKYFPV--TNDNNAWVRNPFT 579
NF FP L + + N + I + I HL+ L YF + N+ + W+ +PF
Sbjct: 422 RNFTNFPFLEEIIVSDNEGI--FIAAEITLHLQQLSNFFHGYFSIGDLNEASKWILDPFL 479
Query: 580 VTVKPASLVARDYESLIDLTSDSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFA 639
+ L +L + Q+ F + L DFW + +P++A+ A+ +L+PFA
Sbjct: 480 FNIDFVDDSYLMKNDLAELRASGQILMEFETMKLEDFWCAQFTAFPNLAKTALEILMPFA 539
Query: 640 TMHLCETGFSYYAATKTKYRKRLDAAPHMRIRLSNITPNIKRICDKKTQ 688
T +LCE GFS KTK R + + +R+ +S P I ++K Q
Sbjct: 540 TTYLCELGFSSLLHFKTKSRSCFNLSDDIRVAISKKVPRFSDIIEQKLQ 588
>gi|21495178 hypothetical protein LOC221786 [Homo sapiens]
Length = 573
Score = 335 bits (858), Expect = 1e-91
Identities = 194/544 (35%), Positives = 310/544 (56%), Gaps = 22/544 (4%)
Query: 169 KQHLDSPENNKPPTPKIVN---TDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDV 225
+ H N +P++++ T NE A +SY V+Y +A AHT E +I P D+
Sbjct: 33 EDHFQKERNKVESSPQVLSRSTTMNERALLSSYLVAYRVAKEKMAHTAAEKIILPACMDM 92
Query: 226 VMRMFDEQYSKKIDAVQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSG 285
V +FD++ + K+ + LS++T++RRI +A +E L+ RL+ F++QLDES D++
Sbjct: 93 VRTIFDDKSADKLRTIPLSDNTISRRICTIAKHLEAMLITRLQSGIDFAIQLDESTDIAS 152
Query: 286 LAVLLVFVRYRFNKSIEEDLLLCESLQSNATGEEIFNCI-NSFMQKHEIEWEKCVDVCSD 344
LLV+VRY + EDLL C +L S+ TG ++F + N + ++++ W+ C + SD
Sbjct: 153 CPTLLVYVRYVWQDDFVEDLLCCLNLNSHITGLDLFTELENCLLGQYKLNWKHCKGISSD 212
Query: 345 ASRAVDGKIAEAV-TLIKYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIK 403
+ + GK + L++ + +HC ++R AL K + SL +VL AV+ +N+IK
Sbjct: 213 GTANMTGKHSRLTEKLLEATHNNAVWNHCFIHREALVSKEISPSLMDVLKNAVKTVNFIK 272
Query: 404 ARPHQSRLLKILCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFM-DSAFRLS 462
SRLL+I C E+G HT LL +TEVRWLS+GKVL R++ELR E+ +F+ + L+
Sbjct: 273 GSSLNSRLLEIFCSEIGVNHTHLLFHTEVRWLSQGKVLSRVYELRNEIYIFLVEKQSHLA 332
Query: 463 DCLTNSSWLLRLAYLADIFTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEE 522
+ + W+ +LAYL+DIF LNE++L MQGKN +F + + + L W + ++
Sbjct: 333 NIFEDDIWVTKLAYLSDIFGILNELSLKMQGKNNDIFQYLEHILGFQKTLLLWQARLKSN 392
Query: 523 --NFDCFPTLSDFLTE--INSTVDKDICSAIVQHLRGLRATLLKYFPVTN----DNNAWV 574
++ FPTL + E IN K+I I+ HL L T YFP N W+
Sbjct: 393 RPSYYMFPTLLQHIEENIINEDCLKEIKLEILLHLTSLSQTFNYYFPEEKFESLKENIWM 452
Query: 575 RNPFTVTVKPASLVARDYE-----SLIDLTSDSQVKQNFSELSLNDFWSSLIQEYPSIAR 629
++PF P S++ + E L+ L+S +K + LSL+ FW + ++P ++R
Sbjct: 453 KDPFAFQ-NPESIIELNLEPEEENELLQLSSSFTLKNYYKILSLSAFWIKIKDDFPLLSR 511
Query: 630 RAVRVLLPFATMHLCETGFSYYAATKTKYRKRLDAAPHMRIRLSNITPNIKRICDKKTQK 689
+++ +LLPF T +LCE GFS KTK R RL++AP MR+ LS+ P+ K + ++ Q
Sbjct: 512 KSILLLLPFTTTYLCELGFSILTRLKTKKRNRLNSAPDMRVALSSCVPDWKELMNR--QA 569
Query: 690 HCSH 693
H SH
Sbjct: 570 HPSH 573
>gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens]
Length = 949
Score = 155 bits (393), Expect = 9e-38
Identities = 115/420 (27%), Positives = 204/420 (48%), Gaps = 18/420 (4%)
Query: 252 IKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVR-YRFNKSIEEDLLLCES 310
++DLA ++ E+L +++ +S+ +DE D++ L +F+R N + E+LL
Sbjct: 526 VEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVP 585
Query: 311 LQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRA-VDGKIAEAVTLIKYVAP---- 365
+ +G EIF+ + ++K I+W K V V S + A VD L VA
Sbjct: 586 MTGTKSGNEIFSRVEKSLKKFCIDWSKLVSVASTGTPAMVDANNGLVTKLKSRVATFCKG 645
Query: 366 -ESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMGAQHT 424
E S C+++ +L + + + +V+D V+ +N+I +R L E+ +Q+
Sbjct: 646 AELKSICCIIHPESLCAQKL--KMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYG 703
Query: 425 ALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADIFTKL 484
+LL TE++WLSRG VL R FE E+ FM S + L++ W+ LA+L D+ L
Sbjct: 704 SLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHL 763
Query: 485 NEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTEINSTVDKD 544
N +N+S+QG + V ++D + + L KL W + + N FPTL ++ S + D
Sbjct: 764 NALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTL-----KLASRNESD 818
Query: 545 ICSAI--VQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASLVARDYESLIDLTSDS 602
+ I + L+ L F + +PF+ + S+ +IDL ++
Sbjct: 819 GLNYIPKIAELKTEFQKRLSDFKLYESELTLFSSPFSTKID--SVHEELQMEVIDLQCNT 876
Query: 603 QVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRKRL 662
+K + ++ + +F+ L YP ++L F + ++CE FS +KTKY +L
Sbjct: 877 VLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQL 936
>gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens]
Length = 949
Score = 152 bits (384), Expect = 1e-36
Identities = 114/418 (27%), Positives = 200/418 (47%), Gaps = 14/418 (3%)
Query: 252 IKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVR-YRFNKSIEEDLLLCES 310
++DLA ++ E+L +++ +S+ +DE D++ L +F+R N + E+LL
Sbjct: 526 VEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVP 585
Query: 311 LQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRA-VDGKIAEAVTLIKYVAP---- 365
+ +G EIF + ++K I W + V V S + A VD L VA
Sbjct: 586 MTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKG 645
Query: 366 -ESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMGAQHT 424
E S C+++ +L + + + +V+D V+ +N+I +R L E+ +Q+
Sbjct: 646 AELKSICCIIHPESLCAQKL--KMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYG 703
Query: 425 ALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADIFTKL 484
+LL TE++WLSRG VL R FE E+ FM S + L++ W+ LA+L D+ L
Sbjct: 704 SLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHL 763
Query: 485 NEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTEINSTVDKD 544
N +N+S+QG + V ++D + + L KL W + + N FPTL L N + +
Sbjct: 764 NALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLK--LVSRNESDGLN 821
Query: 545 ICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASLVARDYESLIDLTSDSQV 604
I + L+ L F + +PF+ + S+ +IDL ++ +
Sbjct: 822 YIPKIAE-LKTEFQKRLSDFKLYESELTLFSSPFSTKID--SVHEELQMEVIDLQCNTVL 878
Query: 605 KQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRKRL 662
K + ++ + +F+ L YP ++L F + ++CE FS +KTKY +L
Sbjct: 879 KTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQL 936
>gi|7662294 EPM2A interacting protein 1 [Homo sapiens]
Length = 607
Score = 113 bits (283), Expect = 5e-25
Identities = 124/544 (22%), Positives = 227/544 (41%), Gaps = 40/544 (7%)
Query: 130 AQCVLCKKILSNSSLAPSKLRRHLETKHAAYK----DKDISFFKQHLDSPENNKPPTPKI 185
A C++C++++ + +RRH E +H Y+ D + + + L + P
Sbjct: 37 ALCLVCRRLIV--ATRERDVRRHYEAEHEYYERYVADGERAALVERLRQGD-----LPVA 89
Query: 186 VNTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDAVQLSN 245
T E A A + +AL G G+ + + +V++R ++ + V LS
Sbjct: 90 SFTPEERAARAGLGLCRLLALKGRGWGEGDFVYQ--CMEVLLREVLPEHVSVLQGVDLSP 147
Query: 246 STVARRIKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVR-YRFNKSIEED 304
+RI + ++ +L R + +SL LD+ A V+ LLVF+R ++ED
Sbjct: 148 DITRQRILSIDRNLRNQLFNRARDFKAYSLALDDQAFVAYENYLLVFIRGVGPELEVQED 207
Query: 305 LLLCESLQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLIKYVA 364
LL +L + + + + I +Q + ++ V + + + + I E L+ Y+
Sbjct: 208 LLTIINLTHHFSVGALMSAILESLQTAGLSLQRMVGLTTTHTLRM---IGENSGLVSYMR 264
Query: 365 PESTSSHC---LLYRHALAVKIMPT---SLKNVLDQAVQIINYIKAR----PHQSRLLKI 414
++ S +C + Y L ++++ + + +++ + I IK R P LL
Sbjct: 265 EKAVSPNCWNVIHYSGFLHLELLSSYDVDVNQIINTISEWIVLIKTRGVRRPEFQTLLTE 324
Query: 415 LCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRL 474
E G + LN WL RGK L +F LR+E+ F+ S + ++ WL
Sbjct: 325 SESEHGERVNGRCLNN---WLRRGKTLKLIFSLRKEMEAFLVSVGATTVHFSDKQWLCDF 381
Query: 475 AYLADIFTKLNEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFL 534
+L DI L E++ ++ V FD + + KL + +EE+N FP L + +
Sbjct: 382 GFLVDIMEHLRELSEELRVSKVFAAAAFDHICTFEVKLNLFQRHIEEKNLTDFPALREVV 441
Query: 535 TEI-------NSTVDKDICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASL 587
E+ D D ++ L+ K + NPF + A +
Sbjct: 442 DELKQQNKEDEKIFDPDRYQMVICRLQKEFERHFKDLRFIKKDLELFSNPFNFKPEYAPI 501
Query: 588 VARDYESLIDLTSDSQVKQNFSELSLNDFWSSLIQE-YPSIARRAVRVLLPFATMHLCET 646
R L L +++ + + L F++ L E YP I A +V F + +CE
Sbjct: 502 SVR--VELTKLQANTNLWNEYRIKDLGQFYAGLSAESYPIIKGVACKVASLFDSNQICEK 559
Query: 647 GFSY 650
FSY
Sbjct: 560 AFSY 563
>gi|55741653 hypothetical protein LOC57691 [Homo sapiens]
Length = 787
Score = 37.4 bits (85), Expect = 0.047
Identities = 70/382 (18%), Positives = 148/382 (38%), Gaps = 63/382 (16%)
Query: 187 NTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDAV----- 241
N N++ +AS +AH + L+K D + + +Q +K IDA
Sbjct: 192 NGSNKTTRQASLRKKIREHDVSKAHGKIQDLLKESTNDSICNLVHKQNNKNIDATVKVFN 251
Query: 242 ----------QLSNSTVARRIKD----------------LAADIEEELVCRL-------- 267
LS+ AR +++ +A I +E+ ++
Sbjct: 252 TVYSLVKHNRPLSDIEGARELQEKNGEVNCLNTRYSATRIAEHIAKEMKMKIFKNIIEEN 311
Query: 268 -KICDGFSLQLDESADVSGLAVLLVFVRYRFNKSIEEDLLLCESLQSNATGEE-----IF 321
KIC + +DE++ VS L+++++ + +L + +T E +
Sbjct: 312 AKIC----IIIDEASTVSKKTTLVIYLQCTIQSAPAPVMLFVALKELVSTIAECIVNTLL 367
Query: 322 NCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLIKYVAPESTSSHCLLYRHALAV 381
+N +E + CSD + + G+ + T + PE +CL +R L++
Sbjct: 368 TTLNDCGFTNEYLKANLIAFCSDGANTILGRKSGVATKLLENFPEIIIWNCLNHRLQLSL 427
Query: 382 KIMPTSLKNV------LDQAVQIINYIKARPHQSRLLKILCEEMGAQHTALLLNTEVRW- 434
+ +K + +D+ I Y + +Q++LL + +E+ + + RW
Sbjct: 428 DDSISEIKQINHLKIFIDKIYSI--YHQPNKNQTKLLGTVAKELETEIIKIGRVMGPRWA 485
Query: 435 ---LSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADIFTKLNEVNLSM 491
L + + + + F S L+ L N ++L LA + DI + + ++ ++
Sbjct: 486 ACSLQAATAVWHAYPIL--YMHFSHSYSGLAKRLANINFLQDLALMIDILEEFSVLSTAL 543
Query: 492 QGKNVTVFTVFDKMSSLLRKLE 513
Q ++ + + +R LE
Sbjct: 544 QSRSTNIKKAQKLIKRTIRALE 565
>gi|109148531 coiled-coil domain containing 98 [Homo sapiens]
Length = 409
Score = 31.2 bits (69), Expect = 3.4
Identities = 31/145 (21%), Positives = 63/145 (43%), Gaps = 23/145 (15%)
Query: 44 SLKQEVESFCYQIVSESNDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKITFSK 103
SL++E++S C ++ E ++Q V L + +L+ + K+ ++ + + K
Sbjct: 221 SLQEELKSICKKV--EDSEQAVDKLVKDVNRLKREIEKRRGAQIQAAR------EKNIQK 272
Query: 104 KPKRRKYDESYLSFGFTYFGNRDAPHAQCVLCKKILSNSSLAPSKLR--RHLETKHAAYK 161
P+ + L T+F N + H+ C L N ++ S HL+
Sbjct: 273 DPQENIFLCQALR---TFFPNSEFLHS----CVMSLKNRHVSKSSCNYNHHLDVVD---- 321
Query: 162 DKDISFFKQHLDSPENNKPPTPKIV 186
+++ +H D PE + TP+I+
Sbjct: 322 --NLTLMVEHTDIPEASPASTPQII 344
>gi|54606888 hypothetical protein LOC23251 [Homo sapiens]
Length = 916
Score = 30.4 bits (67), Expect = 5.8
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 577 PFTVTVKPASLVARDYESLIDLTSDSQVKQNFSELSLNDFWSSLIQEYPSIARRAVRVLL 636
P K L +++ S +DL VK+ F + S+N L + S+ + VL
Sbjct: 425 PIAYAAKQNGLKSKEISSPVDLEKHEPVKK-FKDKSINCTSGQLSSDTSSVGTQTEHVLE 483
Query: 637 PFATMHLCETGFSYYAATKT 656
P LC +G Y+ T
Sbjct: 484 PKKCRDLCTSGQGKYSDRHT 503
>gi|38570115 zinc finger protein 362 [Homo sapiens]
Length = 420
Score = 30.4 bits (67), Expect = 5.8
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 128 PHAQCVLCKKILSNSSLAPSKLRRHLETK--HAAYKDK---DISFFKQHLDSPENNKP 180
PH +C C K +N+S LR HL K H +Y DK +S +QH ++P
Sbjct: 254 PH-KCPHCSKSFANASYLAQHLRIHLGVKPYHCSYCDKSFRQLSHLQQHTRIHTGDRP 310
>gi|118498362 kinectin 1 isoform b [Homo sapiens]
Length = 1306
Score = 30.0 bits (66), Expect = 7.5
Identities = 46/255 (18%), Positives = 107/255 (41%), Gaps = 65/255 (25%)
Query: 37 DLLLKQGSLKQEVESFCYQIVSESNDQKVG-----ILQSEDKQLQPSVSKKSEGELSRVK 91
D+L + +LK +++ F QI ++++ + ++ +DKQ+ K++E L+
Sbjct: 573 DILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQI-----KQTEDSLA--- 624
Query: 92 FISNSNKITFSKKPKRRKYDESYLSFGFTYFGNRDAPHAQCVLCKKILSNSSLAPSKLRR 151
S +++T ++ + + ++L A+ + + + + A +L +
Sbjct: 625 --SERDRLTSKEEELKDIQNMNFLL------------KAEVQKLQALANEQAAAAHELEK 670
Query: 152 HLETKHAAYKDKDISFFKQHLDSPENNKPPTPKIVNTDNESATEASYNVSYHIALSGEAH 211
++ + KD I ++ L +NK KI+N N+ AL E
Sbjct: 671 MQQSVYV--KDDKIRLLEEQLQHEISNKMEEFKILNDQNK-------------ALKSEVQ 715
Query: 212 TIGELLIKPCAKDVVMRMF------DEQYS-----------------KKIDAVQLSNSTV 248
+ L+ + KDVV +M DE+ ++++A++ NS++
Sbjct: 716 KLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSL 775
Query: 249 ARRIKDLAADIEEEL 263
+ ++DL A +++
Sbjct: 776 TKEVQDLKAKQNDQV 790
>gi|118498356 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 30.0 bits (66), Expect = 7.5
Identities = 46/255 (18%), Positives = 107/255 (41%), Gaps = 65/255 (25%)
Query: 37 DLLLKQGSLKQEVESFCYQIVSESNDQKVG-----ILQSEDKQLQPSVSKKSEGELSRVK 91
D+L + +LK +++ F QI ++++ + ++ +DKQ+ K++E L+
Sbjct: 573 DILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQI-----KQTEDSLA--- 624
Query: 92 FISNSNKITFSKKPKRRKYDESYLSFGFTYFGNRDAPHAQCVLCKKILSNSSLAPSKLRR 151
S +++T ++ + + ++L A+ + + + + A +L +
Sbjct: 625 --SERDRLTSKEEELKDIQNMNFLL------------KAEVQKLQALANEQAAAAHELEK 670
Query: 152 HLETKHAAYKDKDISFFKQHLDSPENNKPPTPKIVNTDNESATEASYNVSYHIALSGEAH 211
++ + KD I ++ L +NK KI+N N+ AL E
Sbjct: 671 MQQSVYV--KDDKIRLLEEQLQHEISNKMEEFKILNDQNK-------------ALKSEVQ 715
Query: 212 TIGELLIKPCAKDVVMRMF------DEQYS-----------------KKIDAVQLSNSTV 248
+ L+ + KDVV +M DE+ ++++A++ NS++
Sbjct: 716 KLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSL 775
Query: 249 ARRIKDLAADIEEEL 263
+ ++DL A +++
Sbjct: 776 TKEVQDLKAKQNDQV 790
>gi|118498368 kinectin 1 isoform c [Homo sapiens]
Length = 1300
Score = 30.0 bits (66), Expect = 7.5
Identities = 46/255 (18%), Positives = 107/255 (41%), Gaps = 65/255 (25%)
Query: 37 DLLLKQGSLKQEVESFCYQIVSESNDQKVG-----ILQSEDKQLQPSVSKKSEGELSRVK 91
D+L + +LK +++ F QI ++++ + ++ +DKQ+ K++E L+
Sbjct: 573 DILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQI-----KQTEDSLA--- 624
Query: 92 FISNSNKITFSKKPKRRKYDESYLSFGFTYFGNRDAPHAQCVLCKKILSNSSLAPSKLRR 151
S +++T ++ + + ++L A+ + + + + A +L +
Sbjct: 625 --SERDRLTSKEEELKDIQNMNFLL------------KAEVQKLQALANEQAAAAHELEK 670
Query: 152 HLETKHAAYKDKDISFFKQHLDSPENNKPPTPKIVNTDNESATEASYNVSYHIALSGEAH 211
++ + KD I ++ L +NK KI+N N+ AL E
Sbjct: 671 MQQSVYV--KDDKIRLLEEQLQHEISNKMEEFKILNDQNK-------------ALKSEVQ 715
Query: 212 TIGELLIKPCAKDVVMRMF------DEQYS-----------------KKIDAVQLSNSTV 248
+ L+ + KDVV +M DE+ ++++A++ NS++
Sbjct: 716 KLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSL 775
Query: 249 ARRIKDLAADIEEEL 263
+ ++DL A +++
Sbjct: 776 TKEVQDLKAKQNDQV 790
>gi|33620775 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 30.0 bits (66), Expect = 7.5
Identities = 46/255 (18%), Positives = 107/255 (41%), Gaps = 65/255 (25%)
Query: 37 DLLLKQGSLKQEVESFCYQIVSESNDQKVG-----ILQSEDKQLQPSVSKKSEGELSRVK 91
D+L + +LK +++ F QI ++++ + ++ +DKQ+ K++E L+
Sbjct: 573 DILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQI-----KQTEDSLA--- 624
Query: 92 FISNSNKITFSKKPKRRKYDESYLSFGFTYFGNRDAPHAQCVLCKKILSNSSLAPSKLRR 151
S +++T ++ + + ++L A+ + + + + A +L +
Sbjct: 625 --SERDRLTSKEEELKDIQNMNFLL------------KAEVQKLQALANEQAAAAHELEK 670
Query: 152 HLETKHAAYKDKDISFFKQHLDSPENNKPPTPKIVNTDNESATEASYNVSYHIALSGEAH 211
++ + KD I ++ L +NK KI+N N+ AL E
Sbjct: 671 MQQSVYV--KDDKIRLLEEQLQHEISNKMEEFKILNDQNK-------------ALKSEVQ 715
Query: 212 TIGELLIKPCAKDVVMRMF------DEQYS-----------------KKIDAVQLSNSTV 248
+ L+ + KDVV +M DE+ ++++A++ NS++
Sbjct: 716 KLQTLVSEQPNKDVVEQMEKCIQEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSL 775
Query: 249 ARRIKDLAADIEEEL 263
+ ++DL A +++
Sbjct: 776 TKEVQDLKAKQNDQV 790
>gi|24429588 zinc finger protein 532 [Homo sapiens]
Length = 1301
Score = 30.0 bits (66), Expect = 7.5
Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 4/152 (2%)
Query: 41 KQGSLKQEVESFCYQIVSESNDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKIT 100
K ++K+E E+ ++ S + + ++EDK L+ S K E + K S N +
Sbjct: 197 KNKAVKRETEA---SSINLSVYEPFKVRKAEDK-LKESSDKVLENRVLDGKLSSEKNDTS 252
Query: 101 FSKKPKRRKYDESYLSFGFTYFGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAY 160
+ S LS A A CK+ ++NS + + ++ AA
Sbjct: 253 LPSVAPSKTKSSSKLSSCIAAIAALSAKKAASDSCKEPVANSRESSPLPKEVNDSPRAAD 312
Query: 161 KDKDISFFKQHLDSPENNKPPTPKIVNTDNES 192
K + P +P +P+ ++++N S
Sbjct: 313 KSPESQNLIDGTKKPSLKQPDSPRSISSENSS 344
>gi|119964718 desmoglein 3 preproprotein [Homo sapiens]
Length = 999
Score = 29.6 bits (65), Expect = 9.8
Identities = 45/233 (19%), Positives = 90/233 (38%), Gaps = 38/233 (16%)
Query: 201 SYHIALSGEAHTIGELLIKPCAKDVVMR-------MF-DEQYSKKIDAVQLSNSTVARRI 252
SY + +SG A GE L C ++ ++ MF D QYS +I+ LS+ + ++
Sbjct: 232 SYRLVVSG-ADKDGEGLSTQCECNIKVKDVNDNFPMFRDSQYSARIEENILSSELLRFQV 290
Query: 253 KDLAADIEEELVCRLKICDG-----FSLQLD-----------ESADVSGLAVLLVFVRYR 296
DL + + + G F +Q D ++ D L + + + +
Sbjct: 291 TDLDEEYTDNWLAVYFFTSGNEGNWFEIQTDPRTNEGILKVVKALDYEQLQSVKLSIAVK 350
Query: 297 FNKSIEEDLLLCESLQSNATGEEIFN---------CINSFMQKHEIEWEKCVDVCSDASR 347
+ ++ +QS ++ N +F + I +K VD +
Sbjct: 351 NKAEFHQSVISRYRVQSTPVTIQVINVREGIAFRPASKTFTVQKGISSKKLVDYILGTYQ 410
Query: 348 AVDGKIAEAVTLIKYVAPESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIIN 400
A+D +A + +KYV + + ++ +K +KN+ + I+N
Sbjct: 411 AIDEDTNKAASNVKYVMGRNDGGYLMIDSKTAEIKF----VKNMNRDSTFIVN 459
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.133 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,891,083
Number of Sequences: 37866
Number of extensions: 986294
Number of successful extensions: 2786
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2731
Number of HSP's gapped (non-prelim): 23
length of query: 693
length of database: 18,247,518
effective HSP length: 109
effective length of query: 584
effective length of database: 14,120,124
effective search space: 8246152416
effective search space used: 8246152416
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.