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Search of human proteins with 216548263
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|216548263 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2
[Homo sapiens]
(690 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|216548263 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2 ... 1402 0.0
gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ... 1383 0.0
gi|13518015 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [... 1383 0.0
gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo... 452 e-127
gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ... 446 e-125
gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [... 446 e-125
gi|4758138 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens] 291 1e-78
gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens] 283 3e-76
gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens] 283 3e-76
gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo sap... 273 4e-73
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 271 2e-72
gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens] 261 2e-69
gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens] 261 2e-69
gi|21071032 DEAD-box protein abstrakt [Homo sapiens] 256 6e-68
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi... 250 4e-66
gi|55749865 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo sapi... 244 1e-64
gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo sap... 238 2e-62
gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sap... 208 1e-53
gi|38569503 ATP-dependent RNA helicase ROK1 isoform b [Homo sapi... 206 8e-53
gi|38569505 ATP-dependent RNA helicase ROK1 isoform a [Homo sapi... 206 8e-53
gi|50659095 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Homo sapi... 206 8e-53
gi|13129006 nucleolar protein GU2 [Homo sapiens] 196 8e-50
gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ... 192 1e-48
gi|7661920 eukaryotic translation initiation factor 4A, isoform ... 191 2e-48
gi|51094101 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2 ... 191 2e-48
gi|164419743 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1... 191 2e-48
gi|31542656 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo sapi... 185 1e-46
gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo sapi... 183 4e-46
gi|83700235 eukaryotic translation initiation factor 4A2 [Homo s... 180 3e-45
gi|4503529 eukaryotic translation initiation factor 4A isoform 1... 177 3e-44
>gi|216548263 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2
[Homo sapiens]
Length = 690
Score = 1402 bits (3630), Expect = 0.0
Identities = 690/690 (100%), Positives = 690/690 (100%)
Query: 1 MGDEDWEAEINPHMSSYVPIFEKDRYSGENGDNFNRTPASSSEMDDGPSRRDHFMKSGFA 60
MGDEDWEAEINPHMSSYVPIFEKDRYSGENGDNFNRTPASSSEMDDGPSRRDHFMKSGFA
Sbjct: 1 MGDEDWEAEINPHMSSYVPIFEKDRYSGENGDNFNRTPASSSEMDDGPSRRDHFMKSGFA 60
Query: 61 SGRNFGNRDAGECNKRDNTSTMGGFGVGKSFGNRGFSNSRFEDGDSSGFWRESSNDCEDN 120
SGRNFGNRDAGECNKRDNTSTMGGFGVGKSFGNRGFSNSRFEDGDSSGFWRESSNDCEDN
Sbjct: 61 SGRNFGNRDAGECNKRDNTSTMGGFGVGKSFGNRGFSNSRFEDGDSSGFWRESSNDCEDN 120
Query: 121 PTRNRGFSKRGDNDLDPDECMQRTGGLFGSRRPVLSGTGNGDTSQSRSGSGSERGGYKGL 180
PTRNRGFSKRGDNDLDPDECMQRTGGLFGSRRPVLSGTGNGDTSQSRSGSGSERGGYKGL
Sbjct: 121 PTRNRGFSKRGDNDLDPDECMQRTGGLFGSRRPVLSGTGNGDTSQSRSGSGSERGGYKGL 180
Query: 181 NEEVITGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTI 240
NEEVITGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTI
Sbjct: 181 NEEVITGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTI 240
Query: 241 LVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQT 300
LVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQT
Sbjct: 241 LVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQT 300
Query: 301 GSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCV 360
GSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCV
Sbjct: 301 GSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCV 360
Query: 361 RAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDM 420
RAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDM
Sbjct: 361 RAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDM 420
Query: 421 GFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRD 480
GFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRD
Sbjct: 421 GFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRD 480
Query: 481 VQQTVLQVGQFSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDR 540
VQQTVLQVGQFSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDR
Sbjct: 481 VQQTVLQVGQFSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDR 540
Query: 541 EQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRC 600
EQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRC
Sbjct: 541 EQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRC 600
Query: 601 GNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWLEEIAFSTYIPGFSGSTRGNVFAS 660
GNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWLEEIAFSTYIPGFSGSTRGNVFAS
Sbjct: 601 GNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWLEEIAFSTYIPGFSGSTRGNVFAS 660
Query: 661 VDTRKGKSTLNTAGFSSSQAPNPVDDESWD 690
VDTRKGKSTLNTAGFSSSQAPNPVDDESWD
Sbjct: 661 VDTRKGKSTLNTAGFSSSQAPNPVDDESWD 690
>gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3
[Homo sapiens]
Length = 724
Score = 1383 bits (3580), Expect = 0.0
Identities = 689/724 (95%), Positives = 690/724 (95%), Gaps = 34/724 (4%)
Query: 1 MGDEDWEAEINPHMSSYVPIFEKDRYSGENGDNFNRTPASSSEMDDGPSRRDHFMKSGFA 60
MGDEDWEAEINPHMSSYVPIFEKDRYSGENGDNFNRTPASSSEMDDGPSRRDHFMKSGFA
Sbjct: 1 MGDEDWEAEINPHMSSYVPIFEKDRYSGENGDNFNRTPASSSEMDDGPSRRDHFMKSGFA 60
Query: 61 SGRNFGNRDAGECNKRDNTSTMGGFGVGKSFGNRGFSNSRFEDGDSSGFWRESSNDCEDN 120
SGRNFGNRDAGECNKRDNTSTMGGFGVGKSFGNRGFSNSRFEDGDSSGFWRESSNDCEDN
Sbjct: 61 SGRNFGNRDAGECNKRDNTSTMGGFGVGKSFGNRGFSNSRFEDGDSSGFWRESSNDCEDN 120
Query: 121 PTRNRGFSKRG----------------------------------DNDLDPDECMQRTGG 146
PTRNRGFSKRG +NDLDPDECMQRTGG
Sbjct: 121 PTRNRGFSKRGGYRDGNNSEASGPYRRGGRGSFRGCRGGFGLGSPNNDLDPDECMQRTGG 180
Query: 147 LFGSRRPVLSGTGNGDTSQSRSGSGSERGGYKGLNEEVITGSGKNSWKSEAEGGESSDTQ 206
LFGSRRPVLSGTGNGDTSQSRSGSGSERGGYKGLNEEVITGSGKNSWKSEAEGGESSDTQ
Sbjct: 181 LFGSRRPVLSGTGNGDTSQSRSGSGSERGGYKGLNEEVITGSGKNSWKSEAEGGESSDTQ 240
Query: 207 GPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLN 266
GPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLN
Sbjct: 241 GPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLN 300
Query: 267 NNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRF 326
NNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRF
Sbjct: 301 NNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRF 360
Query: 327 KELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILC 386
KELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILC
Sbjct: 361 KELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILC 420
Query: 387 ATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMF 446
ATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMF
Sbjct: 421 ATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMF 480
Query: 447 SATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIGD 506
SATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIGD
Sbjct: 481 SATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIGD 540
Query: 507 ERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVA 566
ERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVA
Sbjct: 541 ERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVA 600
Query: 567 ARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVL 626
ARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVL
Sbjct: 601 ARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVL 660
Query: 627 TDAQQDVPAWLEEIAFSTYIPGFSGSTRGNVFASVDTRKGKSTLNTAGFSSSQAPNPVDD 686
TDAQQDVPAWLEEIAFSTYIPGFSGSTRGNVFASVDTRKGKSTLNTAGFSSSQAPNPVDD
Sbjct: 661 TDAQQDVPAWLEEIAFSTYIPGFSGSTRGNVFASVDTRKGKSTLNTAGFSSSQAPNPVDD 720
Query: 687 ESWD 690
ESWD
Sbjct: 721 ESWD 724
>gi|13518015 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1
[Homo sapiens]
Length = 724
Score = 1383 bits (3580), Expect = 0.0
Identities = 689/724 (95%), Positives = 690/724 (95%), Gaps = 34/724 (4%)
Query: 1 MGDEDWEAEINPHMSSYVPIFEKDRYSGENGDNFNRTPASSSEMDDGPSRRDHFMKSGFA 60
MGDEDWEAEINPHMSSYVPIFEKDRYSGENGDNFNRTPASSSEMDDGPSRRDHFMKSGFA
Sbjct: 1 MGDEDWEAEINPHMSSYVPIFEKDRYSGENGDNFNRTPASSSEMDDGPSRRDHFMKSGFA 60
Query: 61 SGRNFGNRDAGECNKRDNTSTMGGFGVGKSFGNRGFSNSRFEDGDSSGFWRESSNDCEDN 120
SGRNFGNRDAGECNKRDNTSTMGGFGVGKSFGNRGFSNSRFEDGDSSGFWRESSNDCEDN
Sbjct: 61 SGRNFGNRDAGECNKRDNTSTMGGFGVGKSFGNRGFSNSRFEDGDSSGFWRESSNDCEDN 120
Query: 121 PTRNRGFSKRG----------------------------------DNDLDPDECMQRTGG 146
PTRNRGFSKRG +NDLDPDECMQRTGG
Sbjct: 121 PTRNRGFSKRGGYRDGNNSEASGPYRRGGRGSFRGCRGGFGLGSPNNDLDPDECMQRTGG 180
Query: 147 LFGSRRPVLSGTGNGDTSQSRSGSGSERGGYKGLNEEVITGSGKNSWKSEAEGGESSDTQ 206
LFGSRRPVLSGTGNGDTSQSRSGSGSERGGYKGLNEEVITGSGKNSWKSEAEGGESSDTQ
Sbjct: 181 LFGSRRPVLSGTGNGDTSQSRSGSGSERGGYKGLNEEVITGSGKNSWKSEAEGGESSDTQ 240
Query: 207 GPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLN 266
GPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLN
Sbjct: 241 GPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLN 300
Query: 267 NNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRF 326
NNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRF
Sbjct: 301 NNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRF 360
Query: 327 KELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILC 386
KELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILC
Sbjct: 361 KELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILC 420
Query: 387 ATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMF 446
ATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMF
Sbjct: 421 ATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMF 480
Query: 447 SATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIGD 506
SATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIGD
Sbjct: 481 SATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIGD 540
Query: 507 ERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVA 566
ERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVA
Sbjct: 541 ERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVA 600
Query: 567 ARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVL 626
ARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVL
Sbjct: 601 ARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVL 660
Query: 627 TDAQQDVPAWLEEIAFSTYIPGFSGSTRGNVFASVDTRKGKSTLNTAGFSSSQAPNPVDD 686
TDAQQDVPAWLEEIAFSTYIPGFSGSTRGNVFASVDTRKGKSTLNTAGFSSSQAPNPVDD
Sbjct: 661 TDAQQDVPAWLEEIAFSTYIPGFSGSTRGNVFASVDTRKGKSTLNTAGFSSSQAPNPVDD 720
Query: 687 ESWD 690
ESWD
Sbjct: 721 ESWD 724
>gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo
sapiens]
Length = 662
Score = 452 bits (1162), Expect = e-127
Identities = 278/601 (46%), Positives = 369/601 (61%), Gaps = 55/601 (9%)
Query: 101 FEDGDSSGFWRESSNDCEDNPTRNRGFSKRGDNDLDPDECMQRTGGLFGSRRPVLSGTGN 160
F D DSSG+ SS D + + RG + D G R G G+
Sbjct: 52 FYDKDSSGW--SSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRGRSDYDGIGS 109
Query: 161 -GDTSQSRSGSGS-ERGGYKGLNEEVITGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPP 218
GD RSG G ERGG N S ++ W P PP
Sbjct: 110 RGD----RSGFGKFERGG----NSRWCDKSDEDDWSK------------------PLPPS 143
Query: 219 ED-EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKL 277
E E +F+ TGINF+KYD I VE +G++ PP I +F + + + + NI YT+
Sbjct: 144 ERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRP 203
Query: 278 TPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITAS--------RF-KE 328
TPVQK++IPII RDLMACAQTGSGKTAAFLLPIL+ + DG + R+ +
Sbjct: 204 TPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRR 263
Query: 329 LQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCAT 388
Q P +++APTREL QIY EARKFS+ + VR V+YGG +G IR + +GC++L AT
Sbjct: 264 KQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVAT 323
Query: 389 PGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSA 448
PGRL+D++ + KIGL KYLVLDEADRMLDMGF P++++++ MP K R T+MFSA
Sbjct: 324 PGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSA 383
Query: 449 TFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIG-DE 507
TFP+EIQ LA +FL Y+F+AVG+VG ++ Q V+ V + KR L+++L G D
Sbjct: 384 TFPKEIQMLARDFL-DEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDS 442
Query: 508 RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAA 567
T+VFVETKK AD + FL E + TSIHGDR QR+RE+AL FR GK P+LVAT+VAA
Sbjct: 443 LTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAA 502
Query: 568 RGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLT 627
RGLDI NV+HVINFDLPS I+EYVHRIGRTGR GN G A SFF+ E + ++ + L+ +L
Sbjct: 503 RGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-ERNINITKDLLDLLV 561
Query: 628 DAQQDVPAWLEEIAFSTYIPGFSGSTRGNV--------FASVDTRKGKSTLNTAGFSSSQ 679
+A+Q+VP+WLE +A+ + + GS+RG F + D R+ S +++ FSSS+
Sbjct: 562 EAKQEVPSWLENMAYEHH---YKGSSRGRSKSSRFSGGFGARDYRQ-SSGASSSSFSSSR 617
Query: 680 A 680
A
Sbjct: 618 A 618
>gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
[Homo sapiens]
Length = 660
Score = 446 bits (1147), Expect = e-125
Identities = 258/539 (47%), Positives = 347/539 (64%), Gaps = 33/539 (6%)
Query: 166 SRSGSGSE-------RGGYKGLNEEVITGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPP 218
S GSGS R Y G+ G G+ E G + + + P PP
Sbjct: 85 SERGSGSRGRFDDRGRSDYDGIGNRERPGFGR----FERSGHSRWCDKSVEDDWSKPLPP 140
Query: 219 ED--EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTK 276
+ E +F+ TGINF+KYD I VE +G + PP I F + ++ + + NI YT+
Sbjct: 141 SERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTR 200
Query: 277 LTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQE----- 331
TPVQK++IPII RDLMACAQTGSGKTAAFLLPIL+ + DG K ++E
Sbjct: 201 PTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDG-PGEALKAVKENGRYG 259
Query: 332 -----PECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILC 386
P +++APTREL QIY EARKFS+ + VR V+YGG +G IR + +GC++L
Sbjct: 260 RRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 319
Query: 387 ATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMF 446
ATPGRL+D++ + KIGL KYLVLDEADRMLDMGF P++++++ MP K R T+MF
Sbjct: 320 ATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMF 379
Query: 447 SATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIG- 505
SATFP+EIQ LA +FL Y+F+AVG+VG ++ Q V+ V KR L++IL G
Sbjct: 380 SATFPKEIQMLARDFL-DEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGS 438
Query: 506 DERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSV 565
D T+VFVETKK AD + FL E + TSIHGDR QR+RE+AL FR GK P+LVAT+V
Sbjct: 439 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 498
Query: 566 AARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKV 625
AARGLDI NV+HVINFDLPS I+EYVHRIGRTGR GN G A SFF+ E + ++ + L+ +
Sbjct: 499 AARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-EKNMNITKDLLDL 557
Query: 626 LTDAQQDVPAWLEEIAFSTYIPGFS-GSTRGNVFA----SVDTRKGKSTLNTAGFSSSQ 679
L +A+Q+VP+WLE +A+ + G S G ++ N F+ + D R+ + +++GF +S+
Sbjct: 558 LVEAKQEVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDYRQSSGS-SSSGFGASR 615
Score = 30.0 bits (66), Expect = 7.5
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Query: 52 DHFMKSGFASGRNFGNRDAGECNKRDNTSTMG----GFGVGKSFGNR----GFSNSR-FE 102
+H K G + GR+ NR +G RD + G GFG + +R G+ NSR F
Sbjct: 575 EHHYKGG-SRGRSKSNRFSGGFGARDYRQSSGSSSSGFGASRGSSSRSGGGGYGNSRGFG 633
Query: 103 DGDSSGFW 110
G GF+
Sbjct: 634 GGGYGGFY 641
>gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
[Homo sapiens]
Length = 660
Score = 446 bits (1147), Expect = e-125
Identities = 258/539 (47%), Positives = 347/539 (64%), Gaps = 33/539 (6%)
Query: 166 SRSGSGSE-------RGGYKGLNEEVITGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPP 218
S GSGS R Y G+ G G+ E G + + + P PP
Sbjct: 85 SERGSGSRGRFDDRGRSDYDGIGNRERPGFGR----FERSGHSRWCDKSVEDDWSKPLPP 140
Query: 219 ED--EDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTK 276
+ E +F+ TGINF+KYD I VE +G + PP I F + ++ + + NI YT+
Sbjct: 141 SERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTR 200
Query: 277 LTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQE----- 331
TPVQK++IPII RDLMACAQTGSGKTAAFLLPIL+ + DG K ++E
Sbjct: 201 PTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDG-PGEALKAVKENGRYG 259
Query: 332 -----PECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILC 386
P +++APTREL QIY EARKFS+ + VR V+YGG +G IR + +GC++L
Sbjct: 260 RRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 319
Query: 387 ATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMF 446
ATPGRL+D++ + KIGL KYLVLDEADRMLDMGF P++++++ MP K R T+MF
Sbjct: 320 ATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMF 379
Query: 447 SATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIG- 505
SATFP+EIQ LA +FL Y+F+AVG+VG ++ Q V+ V KR L++IL G
Sbjct: 380 SATFPKEIQMLARDFL-DEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGS 438
Query: 506 DERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSV 565
D T+VFVETKK AD + FL E + TSIHGDR QR+RE+AL FR GK P+LVAT+V
Sbjct: 439 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 498
Query: 566 AARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKV 625
AARGLDI NV+HVINFDLPS I+EYVHRIGRTGR GN G A SFF+ E + ++ + L+ +
Sbjct: 499 AARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN-EKNMNITKDLLDL 557
Query: 626 LTDAQQDVPAWLEEIAFSTYIPGFS-GSTRGNVFA----SVDTRKGKSTLNTAGFSSSQ 679
L +A+Q+VP+WLE +A+ + G S G ++ N F+ + D R+ + +++GF +S+
Sbjct: 558 LVEAKQEVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDYRQSSGS-SSSGFGASR 615
Score = 30.0 bits (66), Expect = 7.5
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Query: 52 DHFMKSGFASGRNFGNRDAGECNKRDNTSTMG----GFGVGKSFGNR----GFSNSR-FE 102
+H K G + GR+ NR +G RD + G GFG + +R G+ NSR F
Sbjct: 575 EHHYKGG-SRGRSKSNRFSGGFGARDYRQSSGSSSSGFGASRGSSSRSGGGGYGNSRGFG 633
Query: 103 DGDSSGFW 110
G GF+
Sbjct: 634 GGGYGGFY 641
>gi|4758138 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens]
Length = 614
Score = 291 bits (746), Expect = 1e-78
Identities = 171/455 (37%), Positives = 267/455 (58%), Gaps = 27/455 (5%)
Query: 242 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 301
+ V GH+ P +L F EAN + + IA+ +T+ T +Q P+ L+G D++ AQTG
Sbjct: 82 ITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 141
Query: 302 SGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVR 361
SGKT ++LLP + H+ H + P C+++APTREL Q+ A ++ ++
Sbjct: 142 SGKTLSYLLPAIVHINHQPF----LERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLK 197
Query: 362 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMG 421
+ IYGG G IR + +G I ATPGRL+D + K L++ YLVLDEADRMLDMG
Sbjct: 198 STCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMG 257
Query: 422 FGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVG-GACRD 480
F P+++K++ + RQTLM+SAT+P+E+++LA +FLK +Y+ + +G + A +
Sbjct: 258 FEPQIRKIVD----QIRPDRQTLMWSATWPKEVRQLAEDFLK-DYIHINIGALELSANHN 312
Query: 481 VQQTVLQVGQFSKREKLVEILRNIGDER---TMVFVETKKKADFIATFLCQEKISTTSIH 537
+ Q V K EKL+ ++ I E+ T+VFVETK++ D + + ++ IH
Sbjct: 313 ILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIH 372
Query: 538 GDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRT 597
GD+ Q+ER+ L +F+ GK P+L+AT VA+RGLD+E+V+ VIN+D P++ ++Y+HRIGRT
Sbjct: 373 GDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRT 432
Query: 598 GRCGNTGRAISFFDLESDNHLAQ--PLVKVLTDAQQDVPAWLEEIAFSTYIPGFSGSTRG 655
R TG A +FF + N++ Q L+ VL +A Q + L ++ SG +RG
Sbjct: 433 ARSTKTGTAYTFF---TPNNIKQVSDLISVLREANQAINPKLLQLVEDR----GSGRSRG 485
Query: 656 NVFASVDTRKGKSTLNTAGFSSSQAPNPVDDESWD 690
D R S GF++ + D E++D
Sbjct: 486 RGGMKDDRRDRYSAGKRGGFNTFR-----DRENYD 515
>gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens]
Length = 731
Score = 283 bits (725), Expect = 3e-76
Identities = 180/491 (36%), Positives = 277/491 (56%), Gaps = 28/491 (5%)
Query: 148 FGSRRPVLSGTGNGDTSQSRSGSGSERGGYKGLNEEVITGSGKNSWKSEAEGGESSDTQG 207
FG+ R G G+ D + R G G+ GG GL + G+ K + + E +
Sbjct: 77 FGTMRG--GGFGDRDRDRDRGGFGARGGG--GLPPKKFGNPGERLRKKKWDLSELPKFE- 131
Query: 208 PKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGHDA-PPAILTFEEANLCQTLN 266
K Y+ P E + Y+ K + + V G D P + F AN Q +
Sbjct: 132 -KNFYVEHP----EVARLTPYEVDELRRKKE---ITVRGGDVCPKPVFAFHHANFPQYVM 183
Query: 267 NNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRF 326
+ + +T+ TP+Q P+ L+GRD++ AQTGSGKT A+LLP + H+ H
Sbjct: 184 DVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPY----L 239
Query: 327 KELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILC 386
+ P C+++APTREL Q+ A + + +++ IYGG G IR + +G I
Sbjct: 240 ERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICI 299
Query: 387 ATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMF 446
ATPGRL+D + K L++ YLVLDEADRMLDMGF P+++K++ + RQTLM+
Sbjct: 300 ATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD----QIRPDRQTLMW 355
Query: 447 SATFPEEIQRLAAEFLKSNYLFVAVGQVG-GACRDVQQTVLQVGQFSKREKLVEILRNIG 505
SAT+P+E+++LA +FL+ +Y + VG + A ++ Q V + K KL++++ I
Sbjct: 356 SATWPKEVRQLAEDFLR-DYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIM 414
Query: 506 DER---TMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVA 562
E+ T++FVETK++ D + + ++ IHGD+ Q ER+ L +FR GK P+L+A
Sbjct: 415 AEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIA 474
Query: 563 TSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPL 622
T VA+RGLD+E+V+ VIN+D P++ ++YVHRIGRT R N G A +FF + A+ L
Sbjct: 475 TDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFF-TPGNLKQAREL 533
Query: 623 VKVLTDAQQDV 633
+KVL +A Q +
Sbjct: 534 IKVLEEANQAI 544
>gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens]
Length = 729
Score = 283 bits (725), Expect = 3e-76
Identities = 180/491 (36%), Positives = 277/491 (56%), Gaps = 28/491 (5%)
Query: 148 FGSRRPVLSGTGNGDTSQSRSGSGSERGGYKGLNEEVITGSGKNSWKSEAEGGESSDTQG 207
FG+ R G G+ D + R G G+ GG GL + G+ K + + E +
Sbjct: 77 FGTMRG--GGFGDRDRDRDRGGFGARGGG--GLPPKKFGNPGERLRKKKWDLSELPKFE- 131
Query: 208 PKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGHDA-PPAILTFEEANLCQTLN 266
K Y+ P E + Y+ K + + V G D P + F AN Q +
Sbjct: 132 -KNFYVEHP----EVARLTPYEVDELRRKKE---ITVRGGDVCPKPVFAFHHANFPQYVM 183
Query: 267 NNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRF 326
+ + +T+ TP+Q P+ L+GRD++ AQTGSGKT A+LLP + H+ H
Sbjct: 184 DVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPY----L 239
Query: 327 KELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILC 386
+ P C+++APTREL Q+ A + + +++ IYGG G IR + +G I
Sbjct: 240 ERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICI 299
Query: 387 ATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMF 446
ATPGRL+D + K L++ YLVLDEADRMLDMGF P+++K++ + RQTLM+
Sbjct: 300 ATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD----QIRPDRQTLMW 355
Query: 447 SATFPEEIQRLAAEFLKSNYLFVAVGQVG-GACRDVQQTVLQVGQFSKREKLVEILRNIG 505
SAT+P+E+++LA +FL+ +Y + VG + A ++ Q V + K KL++++ I
Sbjct: 356 SATWPKEVRQLAEDFLR-DYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIM 414
Query: 506 DER---TMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVA 562
E+ T++FVETK++ D + + ++ IHGD+ Q ER+ L +FR GK P+L+A
Sbjct: 415 AEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIA 474
Query: 563 TSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPL 622
T VA+RGLD+E+V+ VIN+D P++ ++YVHRIGRT R N G A +FF + A+ L
Sbjct: 475 TDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFF-TPGNLKQAREL 533
Query: 623 VKVLTDAQQDV 633
+KVL +A Q +
Sbjct: 534 IKVLEEANQAI 544
>gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo
sapiens]
Length = 648
Score = 273 bits (698), Expect = 4e-73
Identities = 160/395 (40%), Positives = 238/395 (60%), Gaps = 13/395 (3%)
Query: 250 PPAILTFEEANLCQT-LNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAF 308
P TF++A C + NI KAG+ K TP+Q + PI+L G DL+ AQTG+GKT +
Sbjct: 237 PNPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCY 296
Query: 309 LLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGG 368
L+P H++ + S + P +++ PTREL Q+ E K+S+ +R+V +YGG
Sbjct: 297 LMPGFIHLV---LQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKG-LRSVCVYGG 352
Query: 369 TQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKK 428
I ++ +G +I+ ATPGRL D+ + LK I YLVLDEAD+MLDMGF P++ K
Sbjct: 353 GNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMK 412
Query: 429 LISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVG-GACRDVQQTVLQ 487
++ + + RQT+M SAT+P + RLA +LK + V VG + A V+Q ++
Sbjct: 413 IL----LDVRPDRQTVMTSATWPHSVHRLAQSYLKEP-MIVYVGTLDLVAVSSVKQNIIV 467
Query: 488 VGQFSKREKLVEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQRERE 546
+ K + L+++ ++ +VFV K AD +++ L IS S+HGDREQR+RE
Sbjct: 468 TTEEEKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDRE 527
Query: 547 QALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRA 606
+AL +F+ GK +L+AT +A+RGLD+ +V HV NFD P I+EYVHRIGRTGR G TG +
Sbjct: 528 KALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVS 587
Query: 607 ISFFDLESDNHLAQPLVKVLTDAQQDVPAWLEEIA 641
I+ +D +A L+ +L A Q +P L +A
Sbjct: 588 ITTL-TRNDWRVASELINILERANQSIPEELVSMA 621
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 271 bits (692), Expect = 2e-72
Identities = 156/416 (37%), Positives = 243/416 (58%), Gaps = 14/416 (3%)
Query: 229 QTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPII 288
Q +N + + + V G P I ++ + + + N++ K GY K TP+Q +IP I
Sbjct: 347 QEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAI 406
Query: 289 LAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIY 348
++GRDL+ A+TGSGKT AFLLP+ H+M +E + P +I+ PTREL QI
Sbjct: 407 MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ----RSLEEGEGPIAVIMTPTRELALQIT 462
Query: 349 LEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEK---IGLKQ 405
E +KFS +R V +YGGT + I ++ +G I+ TPGR++D++ L++
Sbjct: 463 KECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRR 522
Query: 406 IKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSN 465
+ Y+VLDEADRM DMGF P++ +++ + RQT+MFSATFP ++ LA L S
Sbjct: 523 VTYVVLDEADRMFDMGFEPQVMRIVD----NVRPDRQTVMFSATFPRAMEALARRIL-SK 577
Query: 466 YLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIGDERTMV-FVETKKKADFIAT 524
+ V VG C DV+Q V+ + + K KL+E+L + + +++ FV+ ++ AD +
Sbjct: 578 PIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLK 637
Query: 525 FLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLP 584
L + S+HG +Q +R+ + DF+ G C +LVATSVAARGLD++++ V+N+ P
Sbjct: 638 DLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCP 697
Query: 585 STIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWLEEI 640
+ ++YVHR GRTGR GN G A +F E A ++K L + VP LE++
Sbjct: 698 NHYEDYVHRAGRTGRAGNKGYAYTFI-TEDQARYAGDIIKALELSGTAVPPDLEKL 752
>gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens]
Length = 938
Score = 261 bits (667), Expect = 2e-69
Identities = 206/660 (31%), Positives = 313/660 (47%), Gaps = 99/660 (15%)
Query: 47 GPSRRDHFMKSGFASGRNFGNRDAGECNKRDN-----TSTMGGFG------------VGK 89
GP + F GFA G ++ + ++ + TS+ GFG +G
Sbjct: 7 GPGTKRGFGFGGFAISA--GKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFYKIGS 64
Query: 90 SFGNRGFSNSRFEDGDSSGFWRESSN------DCEDNPTRNRGFSKRGDNDLDPDECMQR 143
N N+ FED + +SSN E++PTR + SK D+D D D
Sbjct: 65 KRANFDEENAYFEDEEE-----DSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDD----- 114
Query: 144 TGGLFGSRRPVLSGTGNGDTSQSRS-----GSGSERGGYKGLNEEVITGSGKNSW----- 193
P+ + + +R ER KG+ +++ + ++
Sbjct: 115 ---------PLEAFMAEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMA 165
Query: 194 --------KSEAEGGESSDTQG----PKVTYIPPPPPED---------EDSIFAHYQTGI 232
+ E E D+ G P I P PP D E + + ++
Sbjct: 166 ENPTAGVVQEEEEDNLEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEIT 225
Query: 233 NF------DKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIP 286
N D + + VSG P +F + L + I K+ YT+ TP+Q +P
Sbjct: 226 NLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVP 285
Query: 287 IILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQE---PECIIVAPTREL 343
+ L+GRD++ A+TGSGKTAAF+ P+L H+M KEL+ P +IV PTREL
Sbjct: 286 VALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQ-------KELEPGDGPIAVIVCPTREL 338
Query: 344 VNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGL 403
QI+ E ++F +R+V +YGG + + + +G I+ TPGRL+D + K+ L
Sbjct: 339 CQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNL 398
Query: 404 KQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLK 463
+++ YLV DEADRM DMGF +++ + S + RQTL+FSATF ++I++LA + L
Sbjct: 399 QRVSYLVFDEADRMFDMGFEYQVRSIAS----HVRPDRQTLLFSATFRKKIEKLARDIL- 453
Query: 464 SNYLFVAVGQVGGACRDVQQTV--LQVGQFSKREKLVEILRNIGDERTMVFVETKKKADF 521
+ + V G +G A DV Q V L G ++ ++FV K A+
Sbjct: 454 IDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEE 513
Query: 522 IATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINF 581
+A L QE + +HGD +Q ER + + DF+ PVLVAT VAARGLDI +++ VIN+
Sbjct: 514 LANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINY 573
Query: 582 DLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWLEEIA 641
D+ ID + HRIGRTGR G G A + D++ A LV+ L A Q V L ++A
Sbjct: 574 DVARDIDTHTHRIGRTGRAGEKGVAYTLL-TPKDSNFAGDLVRNLEGANQHVSKELLDLA 632
>gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens]
Length = 938
Score = 261 bits (667), Expect = 2e-69
Identities = 206/660 (31%), Positives = 313/660 (47%), Gaps = 99/660 (15%)
Query: 47 GPSRRDHFMKSGFASGRNFGNRDAGECNKRDN-----TSTMGGFG------------VGK 89
GP + F GFA G ++ + ++ + TS+ GFG +G
Sbjct: 7 GPGTKRGFGFGGFAISA--GKKEEPKLPQQSHSAFGATSSSSGFGKSAPPQLPSFYKIGS 64
Query: 90 SFGNRGFSNSRFEDGDSSGFWRESSN------DCEDNPTRNRGFSKRGDNDLDPDECMQR 143
N N+ FED + +SSN E++PTR + SK D+D D D
Sbjct: 65 KRANFDEENAYFEDEEE-----DSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDD----- 114
Query: 144 TGGLFGSRRPVLSGTGNGDTSQSRS-----GSGSERGGYKGLNEEVITGSGKNSW----- 193
P+ + + +R ER KG+ +++ + ++
Sbjct: 115 ---------PLEAFMAEVEDQAARDMKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMA 165
Query: 194 --------KSEAEGGESSDTQG----PKVTYIPPPPPED---------EDSIFAHYQTGI 232
+ E E D+ G P I P PP D E + + ++
Sbjct: 166 ENPTAGVVQEEEEDNLEYDSDGNPIAPTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEIT 225
Query: 233 NF------DKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIP 286
N D + + VSG P +F + L + I K+ YT+ TP+Q +P
Sbjct: 226 NLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVP 285
Query: 287 IILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQE---PECIIVAPTREL 343
+ L+GRD++ A+TGSGKTAAF+ P+L H+M KEL+ P +IV PTREL
Sbjct: 286 VALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQ-------KELEPGDGPIAVIVCPTREL 338
Query: 344 VNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGL 403
QI+ E ++F +R+V +YGG + + + +G I+ TPGRL+D + K+ L
Sbjct: 339 CQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNL 398
Query: 404 KQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLK 463
+++ YLV DEADRM DMGF +++ + S + RQTL+FSATF ++I++LA + L
Sbjct: 399 QRVSYLVFDEADRMFDMGFEYQVRSIAS----HVRPDRQTLLFSATFRKKIEKLARDIL- 453
Query: 464 SNYLFVAVGQVGGACRDVQQTV--LQVGQFSKREKLVEILRNIGDERTMVFVETKKKADF 521
+ + V G +G A DV Q V L G ++ ++FV K A+
Sbjct: 454 IDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEE 513
Query: 522 IATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINF 581
+A L QE + +HGD +Q ER + + DF+ PVLVAT VAARGLDI +++ VIN+
Sbjct: 514 LANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINY 573
Query: 582 DLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWLEEIA 641
D+ ID + HRIGRTGR G G A + D++ A LV+ L A Q V L ++A
Sbjct: 574 DVARDIDTHTHRIGRTGRAGEKGVAYTLL-TPKDSNFAGDLVRNLEGANQHVSKELLDLA 632
>gi|21071032 DEAD-box protein abstrakt [Homo sapiens]
Length = 622
Score = 256 bits (653), Expect = 6e-68
Identities = 154/401 (38%), Positives = 221/401 (55%), Gaps = 13/401 (3%)
Query: 244 VSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSG 303
V G PP I +F+E + + K G TP+Q IP IL+GRD++ A TGSG
Sbjct: 171 VEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSG 230
Query: 304 KTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQI------YLEARKFSFG 357
KT F LP++ + F + + P +I+ P+REL Q Y +
Sbjct: 231 KTLVFTLPVIMFCLEQEKRLP-FSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSS 289
Query: 358 TCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRM 417
+R + GG + + I G +++ ATPGRLMD++ K+ + L +YL LDEADRM
Sbjct: 290 PLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRM 349
Query: 418 LDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGA 477
+DMGF +++ + S K QRQTL+FSAT P++IQ A L + + VG+ G A
Sbjct: 350 IDMGFEGDIRTIFSY----FKGQRQTLLFSATMPKKIQNFAKSALVKP-VTINVGRAGAA 404
Query: 478 CRDVQQTVLQVGQFSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIH 537
DV Q V V + +K L+E L+ ++F E K D I +L + + +IH
Sbjct: 405 SLDVIQEVEYVKEEAKMVYLLECLQKTPPP-VLIFAEKKADVDAIHEYLLLKGVEAVAIH 463
Query: 538 GDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRT 597
G ++Q ER +A+ FR GK VLVAT VA++GLD +QHVIN+D+P I+ YVHRIGRT
Sbjct: 464 GGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRT 523
Query: 598 GRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWLE 638
GR GNTG A +F + D + L +L +A+Q VP L+
Sbjct: 524 GRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQ 564
>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
sapiens]
Length = 820
Score = 250 bits (638), Expect = 4e-66
Identities = 149/400 (37%), Positives = 224/400 (56%), Gaps = 35/400 (8%)
Query: 242 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 301
+ G P I ++++++L + I K GY + TP+Q+ +IPI L RD++ A+TG
Sbjct: 379 ITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETG 438
Query: 302 SGKTAAFLLPILAHMMHDGITASRFKELQE----PECIIVAPTRELVNQIYLEARKFSFG 357
SGKTAAFL+P+L + T + ++E P II+APTREL QI E KF
Sbjct: 439 SGKTAAFLIPLLVWIT----TLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKP 494
Query: 358 TCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRM 417
+R V + GG ++ GC I+ ATPGRL+D++ + L + Y+VLDEADRM
Sbjct: 495 LGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRM 554
Query: 418 LDMGFGPEMKKLISCPGMPSKEQ------------------------RQTLMFSATFPEE 453
+DMGF P+++K++ MP Q RQT+MF+AT P
Sbjct: 555 IDMGFEPDVQKILE--HMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPA 612
Query: 454 IQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIGDERTMVFV 513
++RLA +L+ + V +G G V+Q V + + KR+KL+ IL D ++FV
Sbjct: 613 VERLARSYLRRPAV-VYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFV 671
Query: 514 ETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIE 573
KK D +A L + + ++HG + Q +RE AL + + G +LVAT VA RG+DI+
Sbjct: 672 NQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQ 731
Query: 574 NVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLE 613
+V V+N+D+ I++Y+HRIGRTGR G +G AI+F E
Sbjct: 732 DVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKE 771
>gi|55749865 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo
sapiens]
Length = 631
Score = 244 bits (624), Expect = 1e-64
Identities = 139/372 (37%), Positives = 223/372 (59%), Gaps = 12/372 (3%)
Query: 265 LNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITAS 324
L +I + G K TP+Q + PIIL G DL+ AQTG+GKT ++L+P H+ D S
Sbjct: 233 LLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHL--DSQPIS 290
Query: 325 RFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNI 384
R ++ P +++ PTREL + E K+S+ ++++ IYGG I I +G +I
Sbjct: 291 R-EQRNGPGMLVLTPTRELALHVEAECSKYSYKG-LKSICIYGGRNRNGQIEDISKGVDI 348
Query: 385 LCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTL 444
+ ATPGRL D+ + L+ I YLV+DEAD+MLDM F P+++K++ + + RQT+
Sbjct: 349 IIATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKIL----LDVRPDRQTV 404
Query: 445 MFSATFPEEIQRLAAEFLKSNYLFVAVGQVG-GACRDVQQTVLQVGQFSKREKLVEILRN 503
M SAT+P+ +++LA +LK + V VG + A V+Q ++ + KR E + N
Sbjct: 405 MTSATWPDTVRQLALSYLKDP-MIVYVGNLNLVAVNTVKQNIIVTTEKEKRALTQEFVEN 463
Query: 504 IG-DERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVA 562
+ +++ ++FV K AD +++ + IS S+HG+ EQ ++E+A+ DF+ G +L+
Sbjct: 464 MSPNDKVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVEDFKSGNIKILIT 523
Query: 563 TSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPL 622
T + +RGLD+ +V HV N+D P ID YVHR+G GR G TG +++ + D+ +A L
Sbjct: 524 TDIVSRGLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLI-TQRDSKMAGEL 582
Query: 623 VKVLTDAQQDVP 634
+K+L A Q VP
Sbjct: 583 IKILDRANQSVP 594
>gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo
sapiens]
Length = 619
Score = 238 bits (606), Expect = 2e-62
Identities = 150/427 (35%), Positives = 241/427 (56%), Gaps = 24/427 (5%)
Query: 198 EGGESSDTQGPKVTYIPPPPPEDEDSIFAHYQTGINF--DKYDTILVE----VSGHDAPP 251
E E S P+ P P + ++ + +N D+ + + + V G +
Sbjct: 141 EKEEKSKLSNPQKADSEPESPLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTR 200
Query: 252 AILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLP 311
I+ FE +L + LN+N+ K+GY TP+Q IP+ L GRD++A A TGSGKTAAFLLP
Sbjct: 201 PIIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLP 260
Query: 312 ILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTC-VRAVVIYGGTQ 370
++ + + T P +I+ PTREL QI +A++ G ++ V++ GG
Sbjct: 261 VIMRALFESKT---------PSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLP 311
Query: 371 LGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLI 430
L + ++ Q ++ ATPGRL+DII + + L +K +V+DEAD ML MGF ++ ++
Sbjct: 312 LPPQLYRLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDIL 371
Query: 431 SCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQ 490
+P+ QT++ SAT P I++LA++ L N + + G+ C +V+Q +L V
Sbjct: 372 E--NIPN--DCQTILVSATIPTSIEQLASQLLH-NPVRIITGEKNLPCANVRQIILWVED 426
Query: 491 FSKREKLVEIL--RNIGDERTMVFVETKKKADFIATFLCQ-EKISTTSIHGDREQREREQ 547
+K++KL EIL + + +VFV+ K AD ++ + + + + SIH ++ Q ER+
Sbjct: 427 PAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKN 486
Query: 548 ALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAI 607
L G V+V+T V RGLD+ +V+ V+NFD+PS++DEYVH+IGR GR G G AI
Sbjct: 487 ILKGLLEGDYEVVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQIGRVGRLGQNGTAI 546
Query: 608 SFFDLES 614
+F + S
Sbjct: 547 TFINNNS 553
>gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo
sapiens]
Length = 796
Score = 208 bits (530), Expect = 1e-53
Identities = 136/377 (36%), Positives = 209/377 (55%), Gaps = 20/377 (5%)
Query: 254 LTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPIL 313
L+F++ NL + L I G+ + TP+QK IP+ L G+D+ ACA TG+GKTAAF LP+L
Sbjct: 218 LSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVL 277
Query: 314 AHMMHDGITASRFKELQEP--ECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQL 371
++ +K Q P +++ PTREL Q++ R+ + + + GG +
Sbjct: 278 ERLI--------YKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDV 329
Query: 372 GHSIRQIVQGCNILCATPGRLMDIIGK-EKIGLKQIKYLVLDEADRMLDMGFGPEMKKLI 430
+ +IL ATPGRL+D + L I+ L+LDEADRMLD F +MK++I
Sbjct: 330 KSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEII 389
Query: 431 SCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQV-- 488
RQT++FSAT +E++ LA+ LK N + + V ++Q +++
Sbjct: 390 RM----CSHHRQTMLFSATMTDEVKDLASVSLK-NPVRIFVNSNTDVAPFLRQEFIRIRP 444
Query: 489 GQFSKREKLVE-ILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQ 547
+ RE +V +L + M+F +TKK+A + L + +HG+ Q +R +
Sbjct: 445 NREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLE 504
Query: 548 ALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAI 607
AL F+ + +LVAT VAARGLDIE V+ VINF +P+TI YVHR+GRT R G GR++
Sbjct: 505 ALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSV 564
Query: 608 SFFDLESDNHLAQPLVK 624
S E + + + +VK
Sbjct: 565 SLVG-EDERKMLKEIVK 580
>gi|38569503 ATP-dependent RNA helicase ROK1 isoform b [Homo
sapiens]
Length = 491
Score = 206 bits (523), Expect = 8e-53
Identities = 137/405 (33%), Positives = 223/405 (55%), Gaps = 18/405 (4%)
Query: 242 VEVSGHDAPPAILTFEEANLCQTLNN----NIAKAGYTKLTPVQKYSIPIILAGRDLMAC 297
+ V G D P I TF++ + +N+ NI AG+ TP+Q +IP++L GR+L+A
Sbjct: 41 IHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLAS 100
Query: 298 AQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFG 357
A TGSGKT AF +PIL + R +I++PTREL +QI+ E K S G
Sbjct: 101 APTGSGKTLAFSIPILMQLKQPANKGFR--------ALIISPTRELASQIHRELIKISEG 152
Query: 358 TCVRAVVIYGGTQLGHSIR-QIVQGCNILCATPGRLMDIIGKEKIG--LKQIKYLVLDEA 414
T R +I+ + + +IL TP RL+ ++ ++ G L +++LV+DE+
Sbjct: 153 TGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDES 212
Query: 415 DRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQV 474
D++ + G +L S + + + MFSATF ++++ L N + V++G
Sbjct: 213 DKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNL-DNVISVSIGAR 271
Query: 475 GGACRDVQQTVLQVG-QFSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKIST 533
A V+Q +L VG + K + E+++ + +VFV++ ++A + L E I+
Sbjct: 272 NSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERAKELFHELIYEGINV 331
Query: 534 TSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHR 593
IH +R Q++R+ + FR GK VL+ T++ ARG+D + V VIN+D P++ EY+HR
Sbjct: 332 DVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHR 391
Query: 594 IGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWLE 638
IGRTGR GN G+AI+FF E D L + + V+ A VP +++
Sbjct: 392 IGRTGRAGNKGKAITFF-TEDDKPLLRSVANVIQQAGCPVPEYIK 435
>gi|38569505 ATP-dependent RNA helicase ROK1 isoform a [Homo
sapiens]
Length = 599
Score = 206 bits (523), Expect = 8e-53
Identities = 137/405 (33%), Positives = 223/405 (55%), Gaps = 18/405 (4%)
Query: 242 VEVSGHDAPPAILTFEEANLCQTLNN----NIAKAGYTKLTPVQKYSIPIILAGRDLMAC 297
+ V G D P I TF++ + +N+ NI AG+ TP+Q +IP++L GR+L+A
Sbjct: 149 IHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLAS 208
Query: 298 AQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFG 357
A TGSGKT AF +PIL + R +I++PTREL +QI+ E K S G
Sbjct: 209 APTGSGKTLAFSIPILMQLKQPANKGFR--------ALIISPTRELASQIHRELIKISEG 260
Query: 358 TCVRAVVIYGGTQLGHSIR-QIVQGCNILCATPGRLMDIIGKEKIG--LKQIKYLVLDEA 414
T R +I+ + + +IL TP RL+ ++ ++ G L +++LV+DE+
Sbjct: 261 TGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDES 320
Query: 415 DRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQV 474
D++ + G +L S + + + MFSATF ++++ L N + V++G
Sbjct: 321 DKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNL-DNVISVSIGAR 379
Query: 475 GGACRDVQQTVLQVG-QFSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKIST 533
A V+Q +L VG + K + E+++ + +VFV++ ++A + L E I+
Sbjct: 380 NSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIERAKELFHELIYEGINV 439
Query: 534 TSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHR 593
IH +R Q++R+ + FR GK VL+ T++ ARG+D + V VIN+D P++ EY+HR
Sbjct: 440 DVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHR 499
Query: 594 IGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWLE 638
IGRTGR GN G+AI+FF E D L + + V+ A VP +++
Sbjct: 500 IGRTGRAGNKGKAITFF-TEDDKPLLRSVANVIQQAGCPVPEYIK 543
>gi|50659095 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Homo
sapiens]
Length = 783
Score = 206 bits (523), Expect = 8e-53
Identities = 150/452 (33%), Positives = 232/452 (51%), Gaps = 33/452 (7%)
Query: 181 NEEVITGSGKNSWKSEAEGGESSDTQGPKVTY-IPPPPPEDEDSIFAHYQTGINFDKYDT 239
+EE I K E E + + PK+ P P P+ S A ++ ++
Sbjct: 121 SEEEIDAPKPKKMKKEKEMNGETREKSPKLKNGFPHPEPDCNPSEAASEESNSEIEQ--- 177
Query: 240 ILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQ 299
E+ A F + + + G T L P+Q + + +G+DL+A A+
Sbjct: 178 ---EIPVEQKEGAFSNFP---ISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDLIAQAR 231
Query: 300 TGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTC 359
TG+GKT +F +P++ + G R K + P+ +++APTREL NQ+ ++ FS T
Sbjct: 232 TGTGKTFSFAIPLIEKL--HGELQDR-KRGRAPQVLVLAPTRELANQV---SKDFSDITK 285
Query: 360 VRAVV-IYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRML 418
+V YGGT G ++ G +IL TPGR+ D I K+ L ++K++VLDE D+ML
Sbjct: 286 KLSVACFYGGTPYGGQFERMRNGIDILVGTPGRIKDHIQNGKLDLTKLKHVVLDEVDQML 345
Query: 419 DMGFGPEMKKLISCP-GMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGA 477
DMGF ++++++S S++ QTL+FSAT P + +A +++KS Y QV
Sbjct: 346 DMGFADQVEEILSVAYKKDSEDNPQTLLFSATCPHWVFNVAKKYMKSTY-----EQVDLI 400
Query: 478 CRDVQQTVLQVGQFSKREKLVEILRNIGDE---------RTMVFVETKKKADFIATFLCQ 528
+ Q+T + V + + + IGD RT++F ETKK+A ++
Sbjct: 401 GKKTQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGHQGRTIIFCETKKEAQELSQNSAI 460
Query: 529 EKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTID 588
++ S+HGD Q++RE L FR G VLVAT+VAARGLDI V VI P ++
Sbjct: 461 KQ-DAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVE 519
Query: 589 EYVHRIGRTGRCGNTGRAISFFDLESDNHLAQ 620
Y+HR GRTGR G TG I F+ + + L Q
Sbjct: 520 SYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQ 551
>gi|13129006 nucleolar protein GU2 [Homo sapiens]
Length = 737
Score = 196 bits (497), Expect = 8e-50
Identities = 123/343 (35%), Positives = 194/343 (56%), Gaps = 11/343 (3%)
Query: 273 GYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEP 332
G T L P+Q + + G+DL+A A+TG+GKT +F +P++ + + T K+ + P
Sbjct: 156 GVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQET---IKKSRSP 212
Query: 333 ECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRL 392
+ +++APTREL NQ+ + + + V YGGT I I G +IL TPGR+
Sbjct: 213 KVLVLAPTRELANQVAKDFKDITRKLSVAC--FYGGTSYQSQINHIRNGIDILVGTPGRI 270
Query: 393 MDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLI-SCPGMPSKEQRQTLMFSATFP 451
D + ++ L +++++VLDE D+MLD+GF +++ +I S++ QTL+FSAT P
Sbjct: 271 KDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCP 330
Query: 452 EEIQRLAAEFLKSNYLFV-AVGQVGG-ACRDVQQTVLQVGQFSKREKLVEILR--NIGDE 507
+ + ++A +++KS Y V VG++ A V+ +Q + + ++L+ + +
Sbjct: 331 QWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEG 390
Query: 508 RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAA 567
R ++F ETKK +A K + +HGD Q +RE L FR G VLVAT+VAA
Sbjct: 391 RAIIFCETKKNVTEMA-MNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAA 449
Query: 568 RGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFF 610
RGLDI V VI P ++ Y+HR GRTGR G TG I F+
Sbjct: 450 RGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFY 492
>gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1
[Homo sapiens]
Length = 455
Score = 192 bits (487), Expect = 1e-48
Identities = 125/363 (34%), Positives = 190/363 (52%), Gaps = 18/363 (4%)
Query: 255 TFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILA 314
TF++ + L + G+TK T +Q +IP+ L GRD++ A+TGSGKT AF LPIL
Sbjct: 25 TFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILN 84
Query: 315 HMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHS 374
++ Q +++ PTREL QI + V++ VI GG
Sbjct: 85 ALLETP---------QRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQ 135
Query: 375 IRQIVQGCNILCATPGRLMDIIGKEK-IGLKQIKYLVLDEADRMLDMGFGPEMKKLISCP 433
+ + +I+ ATPGRL+D + K L+ +KYLV+DEADR+L+M F E+ K++
Sbjct: 136 SLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKV- 194
Query: 434 GMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSK 493
R+T +FSAT +++Q+L LK N + AV +QQ + + K
Sbjct: 195 ---IPRDRKTFLFSATMTKKVQKLQRAALK-NPVKCAVSSKYQTVEKLQQYYIFIPSKFK 250
Query: 494 REKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFR 553
LV IL + M+F T A L + +HG Q +R +L F+
Sbjct: 251 DTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFK 310
Query: 554 FGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISF---F 610
+L+AT VA+RGLDI +V V+NFD+P+ +Y+HR+GRT R G +G+AI+F +
Sbjct: 311 AKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQY 370
Query: 611 DLE 613
D+E
Sbjct: 371 DVE 373
>gi|7661920 eukaryotic translation initiation factor 4A, isoform 3
[Homo sapiens]
Length = 411
Score = 191 bits (485), Expect = 2e-48
Identities = 125/404 (30%), Positives = 218/404 (53%), Gaps = 23/404 (5%)
Query: 238 DTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMAC 297
D VE + TF+ L + L I G+ K + +Q+ +I I+ GRD++A
Sbjct: 22 DMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQ 81
Query: 298 AQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFG 357
+Q+G+GKTA F + +L + +++E + +I+APTREL QI
Sbjct: 82 SQSGTGKTATFSISVLQCLDI---------QVRETQALILAPTRELAVQIQKGLLALGDY 132
Query: 358 TCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRM 417
V+ GGT +G IR++ G +++ TPGR+ D+I + + + IK LVLDEAD M
Sbjct: 133 MNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEM 192
Query: 418 LDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGA 477
L+ GF ++ + +P Q ++ SAT P EI + +F+ ++ + + V +
Sbjct: 193 LNKGFKEQIYDVYRY--LPPATQ--VVLISATLPHEILEMTNKFM-TDPIRILVKRDELT 247
Query: 478 CRDVQQTVLQVGQFS-KREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSI 536
++Q + V + K + L ++ + + ++F TK+K D++ + + + +S+
Sbjct: 248 LEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSM 307
Query: 537 HGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGR 596
HGD Q+ERE + +FR G VL++T V ARGLD+ V +IN+DLP+ + Y+HRIGR
Sbjct: 308 HGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGR 367
Query: 597 TGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWLEEI 640
+GR G G AI+F +++D+ +++L D +Q ++E+
Sbjct: 368 SGRYGRKGVAINF--VKNDD------IRILRDIEQYYSTQIDEM 403
>gi|51094101 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2
[Homo sapiens]
Length = 881
Score = 191 bits (485), Expect = 2e-48
Identities = 116/357 (32%), Positives = 195/357 (54%), Gaps = 18/357 (5%)
Query: 256 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 315
F+ L + I K GY TP+Q+ +IP+IL G+D++A A+TGSGKTA FLLP+
Sbjct: 98 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFER 157
Query: 316 MM-HDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHS 374
+ H T +R +I++PTREL Q ++ T ++ +I GG ++
Sbjct: 158 LKTHSAQTGAR--------ALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMEDQ 209
Query: 375 IRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLIS-CP 433
+ + +I+ ATPGRL+ + + + L+ ++Y+V DEADR+ +MGF +++++I+ P
Sbjct: 210 FAALHENPDIIIATPGRLVHVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQLQEIIARLP 269
Query: 434 GMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSK 493
G QT++FSAT P+ + A L L + + ++ + V + +K
Sbjct: 270 G-----GHQTVLFSATLPKLLVEFARAGLTEPVL-IRLDVDTKLNEQLKTSFFLVREDTK 323
Query: 494 REKLVEILRNI--GDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGD 551
L+ +L N+ ++T+VFV TK A+++ L +++S I+ + R+ L
Sbjct: 324 AAVLLHLLHNVVRPQDQTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAK 383
Query: 552 FRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAIS 608
F GKC L+ T +AARGLDI + +VIN+ P+ ++HR+GR R G +G A S
Sbjct: 384 FTLGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYS 440
>gi|164419743 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1
[Homo sapiens]
Length = 882
Score = 191 bits (485), Expect = 2e-48
Identities = 116/357 (32%), Positives = 195/357 (54%), Gaps = 18/357 (5%)
Query: 256 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 315
F+ L + I K GY TP+Q+ +IP+IL G+D++A A+TGSGKTA FLLP+
Sbjct: 98 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFER 157
Query: 316 MM-HDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHS 374
+ H T +R +I++PTREL Q ++ T ++ +I GG ++
Sbjct: 158 LKTHSAQTGAR--------ALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMEDQ 209
Query: 375 IRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLIS-CP 433
+ + +I+ ATPGRL+ + + + L+ ++Y+V DEADR+ +MGF +++++I+ P
Sbjct: 210 FAALHENPDIIIATPGRLVHVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQLQEIIARLP 269
Query: 434 GMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSK 493
G QT++FSAT P+ + A L L + + ++ + V + +K
Sbjct: 270 G-----GHQTVLFSATLPKLLVEFARAGLTEPVL-IRLDVDTKLNEQLKTSFFLVREDTK 323
Query: 494 REKLVEILRNI--GDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGD 551
L+ +L N+ ++T+VFV TK A+++ L +++S I+ + R+ L
Sbjct: 324 AAVLLHLLHNVVRPQDQTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAK 383
Query: 552 FRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAIS 608
F GKC L+ T +AARGLDI + +VIN+ P+ ++HR+GR R G +G A S
Sbjct: 384 FTLGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYS 440
>gi|31542656 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo
sapiens]
Length = 483
Score = 185 bits (469), Expect = 1e-46
Identities = 127/377 (33%), Positives = 194/377 (51%), Gaps = 27/377 (7%)
Query: 256 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 315
F E L L + G + TPVQ IP IL GRD + CA+TGSGKTAAF+LPIL
Sbjct: 4 FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQK 63
Query: 316 MMHD--GITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGH 373
+ D GI C+++ PTREL QI + R ++ +I GG +
Sbjct: 64 LSEDPYGIF-----------CLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVA 112
Query: 374 SIRQIVQGCNILCATPGRLMDII-GKEKIGLKQIKYLVLDEADRMLDMG---FGPEMKKL 429
++ + +++ ATPGRL D + +K+I++LV+DEADR+L+ G F +++ +
Sbjct: 113 QALELSRKPHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAI 172
Query: 430 ISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVG 489
++ +P++ RQTL+FSAT + ++ L + + A V + Q L V
Sbjct: 173 LAA--VPAR--RQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVS-TVEQLDQRYLLVP 227
Query: 490 QFSKREKLVEILRNIGDERT----MVFVETKKKADFIATFLCQEKISTTSIHGDREQRER 545
+ K LV +++ DE ++F T K + L + T ++H +Q+ER
Sbjct: 228 EKVKDAYLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKER 287
Query: 546 EQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGR 605
AL F+ +L+AT VA+RGLDI VQ VIN + P Y+HR+GRT R G G+
Sbjct: 288 FAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQ 347
Query: 606 AISFFDLESDNHLAQPL 622
AI+ + D HL +
Sbjct: 348 AITLV-TQYDIHLVHAI 363
>gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo
sapiens]
Length = 483
Score = 183 bits (465), Expect = 4e-46
Identities = 119/358 (33%), Positives = 191/358 (53%), Gaps = 24/358 (6%)
Query: 256 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 315
FE+ L + L I + G+ K +P+Q+ SIPI L+GRD++A A+ G+GK+ A+L+P+L
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 316 M--MHDGITASRFKELQEPECIIVAPTREL---VNQIYLEARKFSFGTCVRAVVIYGGTQ 370
+ D I A +++ PTREL V+QI ++ K G V A GGT
Sbjct: 158 LDLKKDNIQA-----------MVIVPTRELALQVSQICIQVSKHMGGAKVMATT--GGTN 204
Query: 371 LGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLI 430
L I ++ +++ ATPGR++D+I K + ++ +VLDEAD++L F M+ +I
Sbjct: 205 LRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDII 264
Query: 431 SCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQ 490
+ + RQ L++SATFP +Q+ L+ Y + ++ + V Q V +
Sbjct: 265 ----LTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEEL--TLKGVTQYYAYVTE 318
Query: 491 FSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALG 550
K L + + ++++F + ++ + +A + Q S IH Q R +
Sbjct: 319 RQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFH 378
Query: 551 DFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAIS 608
DFR G C LV T + RG+DI+ V VINFD P + Y+HRIGR+GR G+ G AI+
Sbjct: 379 DFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAIN 436
>gi|83700235 eukaryotic translation initiation factor 4A2 [Homo
sapiens]
Length = 407
Score = 180 bits (457), Expect = 3e-45
Identities = 111/384 (28%), Positives = 205/384 (53%), Gaps = 23/384 (5%)
Query: 256 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 315
F++ NL ++L I G+ K + +Q+ +I + G D++A AQ+G+GKTA F + IL
Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94
Query: 316 MMHDGITASRFKELQEPECIIVAPTRELVNQIY---LEARKFSFGTCVRAVVIYGGTQLG 372
+ E +E + +++APTREL QI L + TC + GGT +
Sbjct: 95 LEI---------EFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACI---GGTNVR 142
Query: 373 HSIRQI-VQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLIS 431
+ ++++ + +I+ TPGR+ D++ + + K IK VLDEAD ML GF ++ ++
Sbjct: 143 NEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQ 202
Query: 432 CPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQF 491
Q ++ SAT P ++ + +F++ + + V + ++Q + V +
Sbjct: 203 ----KLNTSIQVVLLSATMPTDVLEVTKKFMRDP-IRILVKKEELTLEGIKQFYINVERE 257
Query: 492 S-KREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALG 550
K + L ++ + + ++F+ T++K D++ + + +++HGD +Q+ER+ +
Sbjct: 258 EWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMR 317
Query: 551 DFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFF 610
+FR G VL+ T + ARG+D++ V VIN+DLP+ + Y+HRIGR GR G G AI+F
Sbjct: 318 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFV 377
Query: 611 DLESDNHLAQPLVKVLTDAQQDVP 634
E D + + + +++P
Sbjct: 378 -TEEDKRILRDIETFYNTTVEEMP 400
>gi|4503529 eukaryotic translation initiation factor 4A isoform 1
[Homo sapiens]
Length = 406
Score = 177 bits (449), Expect = 3e-44
Identities = 106/366 (28%), Positives = 192/366 (52%), Gaps = 16/366 (4%)
Query: 255 TFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILA 314
+F++ NL ++L I G+ K + +Q+ +I + G D++A AQ+G+GKTA F + IL
Sbjct: 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92
Query: 315 HMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHS 374
+ D L+ + +++APTREL QI GGT +
Sbjct: 93 QIELD---------LKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAE 143
Query: 375 IRQI-VQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCP 433
++++ ++ +I+ TPGR+ D++ + + K IK VLDEAD ML GF ++ +
Sbjct: 144 VQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQ-- 201
Query: 434 GMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFS- 492
Q ++ SAT P ++ + +F++ + + V + ++Q + V +
Sbjct: 202 --KLNSNTQVVLLSATMPSDVLEVTKKFMRDP-IRILVKKEELTLEGIRQFYINVEREEW 258
Query: 493 KREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDF 552
K + L ++ + + ++F+ T++K D++ + + +++HGD +Q+ER+ + +F
Sbjct: 259 KLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREF 318
Query: 553 RFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDL 612
R G VL+ T + ARG+D++ V VIN+DLP+ + Y+HRIGR GR G G AI+
Sbjct: 319 RSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTE 378
Query: 613 ESDNHL 618
E L
Sbjct: 379 EDKRTL 384
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,189,959
Number of Sequences: 37866
Number of extensions: 1375374
Number of successful extensions: 5051
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 4446
Number of HSP's gapped (non-prelim): 422
length of query: 690
length of database: 18,247,518
effective HSP length: 109
effective length of query: 581
effective length of database: 14,120,124
effective search space: 8203792044
effective search space used: 8203792044
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.