Guide to the Human Genome
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Name: SOCS5 Sequence: fasta or formatted (536aa) NCBI GI: 21618354
Description:

suppressor of cytokine signaling 5

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt mRNA [536aa] suppressor of cytokine signaling 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         22           1
 C cysteine            3.0         16           1
 D aspartate           6.0         32           1
 E glutamate           5.8         31           2
 F phenylalanine       3.9         21           2
 G glycine             5.2         28           2
 H histidine           3.5         19           1
 I isoleucine          4.1         22           1
 K lysine              5.8         31           3
 L leucine             8.6         46           2
 M methionine          1.9         10           1
 N asparagine          3.9         21           2
 P proline             5.6         30           3
 Q glutamine           5.4         29           3
 R arginine            8.0         43           3
 S serine             10.8         58           2
 T threonine           5.6         30           3
 V valine              4.7         25           1
 W tryptophan          1.3          7           1
 Y tyrosine            2.8         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   suppressor of cytokine signaling 5 
SOCS5                 1.000   suppressor of cytokine signaling 5 
SOCS4                 0.378   suppressor of cytokine signaling 4 
SOCS4                 0.378   suppressor of cytokine signaling 4 
SOCS6                 0.071   suppressor of cytokine signaling 6 
SOCS2                 0.047   suppressor of cytokine signaling-2 
SOCS7                 0.046   suppressor of cytokine signaling 7 
CISH                  0.040   cytokine-inducible SH2-containing protein isoform 1...
CISH                  0.040   cytokine-inducible SH2-containing protein isoform 2 ...
SOCS1                 0.027   suppressor of cytokine signaling 1 
NCK1                  0.022   NCK adaptor protein 1 
SOCS3                 0.019   suppressor of cytokine signaling 3 
PIK3R3                0.018   phosphoinositide-3-kinase, regulatory subunit 3 (p5...
PIK3R3                0.018   phosphoinositide-3-kinase, regulatory subunit 3 (p5...
CRK                   0.016   v-crk sarcoma virus CT10 oncogene homolog isoform a ...
CRK                   0.016   v-crk sarcoma virus CT10 oncogene homolog isoform b ...
NCK2                  0.016   NCK adaptor protein 2 isoform A 
NCK2                  0.016   NCK adaptor protein 2 isoform A 
PIK3R1                0.014   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
PIK3R1                0.014   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
PIK3R1                0.014   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
PIK3R2                0.013   phosphoinositide-3-kinase, regulatory subunit 2 (beta...
DAPP1                 0.013   dual adaptor of phosphotyrosine and 3-phosphoinosit...
VAV3                  0.011   vav 3 guanine nucleotide exchange factor isoform 2 ...
VAV3                  0.011   vav 3 guanine nucleotide exchange factor isoform 1 ...
BRWD1                 0.011   bromodomain and WD repeat domain containing 1 isofor...
BRWD1                 0.011   bromodomain and WD repeat domain containing 1 isofor...
PLCG2                 0.009   phospholipase C, gamma 2 
VAV2                  0.009   vav 2 guanine nucleotide exchange factor isoform 1 ...
VAV2                  0.009   vav 2 guanine nucleotide exchange factor isoform 2 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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