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Search of human proteins with 215820632
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|215820632 MON1 homolog A isoform b [Homo sapiens]
(490 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|215820632 MON1 homolog A isoform b [Homo sapiens] 986 0.0
gi|215820630 MON1 homolog A isoform a [Homo sapiens] 694 0.0
gi|7662354 MON1 homolog B [Homo sapiens] 320 1e-87
gi|189011568 adenomatous polyposis coli [Homo sapiens] 35 0.15
gi|189011566 adenomatous polyposis coli [Homo sapiens] 35 0.15
gi|53759122 adenomatous polyposis coli [Homo sapiens] 35 0.15
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 34 0.26
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens] 34 0.26
gi|214010165 rab11-family interacting protein 3 isoform 2 [Homo ... 32 1.3
gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo sa... 32 1.3
gi|56121815 ADAM metallopeptidase with thrombospondin type 1 mot... 32 1.3
gi|190343010 SP110 nuclear body protein isoform a [Homo sapiens] 32 1.7
gi|190343008 SP110 nuclear body protein isoform b [Homo sapiens] 32 1.7
gi|190343006 SP110 nuclear body protein isoform c [Homo sapiens] 32 1.7
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 31 2.2
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 31 2.2
gi|110347431 latent transforming growth factor beta binding prot... 31 2.2
gi|169213067 PREDICTED: hypothetical protein [Homo sapiens] 30 3.8
gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens] 30 5.0
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 30 5.0
gi|13376247 zinc finger protein 672 [Homo sapiens] 30 5.0
gi|157278361 nuclear localized factor 2 [Homo sapiens] 30 5.0
gi|55742730 storkhead box 2 [Homo sapiens] 30 5.0
gi|30023818 tripartite motif protein 50A [Homo sapiens] 30 6.5
gi|24307963 zinc finger, DHHC-type containing 1 [Homo sapiens] 30 6.5
gi|147903292 nuclear localized factor 1 [Homo sapiens] 30 6.5
gi|238859651 pleckstrin homology domain containing family A memb... 29 8.5
gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B is... 29 8.5
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 29 8.5
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens] 29 8.5
>gi|215820632 MON1 homolog A isoform b [Homo sapiens]
Length = 490
Score = 986 bits (2549), Expect = 0.0
Identities = 490/490 (100%), Positives = 490/490 (100%)
Query: 1 MHPGGGPSRAERLELGLGRERPAKAIFLHRRPGEGGGRERCLRCGHVCVRRGPGPREAVP 60
MHPGGGPSRAERLELGLGRERPAKAIFLHRRPGEGGGRERCLRCGHVCVRRGPGPREAVP
Sbjct: 1 MHPGGGPSRAERLELGLGRERPAKAIFLHRRPGEGGGRERCLRCGHVCVRRGPGPREAVP 60
Query: 61 SGRPRPDTLTPPWVRQRAVTGTFCASWTPLRNRRAQRMATDMQRKRSSECLDGTLTPSDG 120
SGRPRPDTLTPPWVRQRAVTGTFCASWTPLRNRRAQRMATDMQRKRSSECLDGTLTPSDG
Sbjct: 61 SGRPRPDTLTPPWVRQRAVTGTFCASWTPLRNRRAQRMATDMQRKRSSECLDGTLTPSDG 120
Query: 121 QSMERAESPTPGMAQGMEPDGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQILS 180
QSMERAESPTPGMAQGMEPDGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQILS
Sbjct: 121 QSMERAESPTPGMAQGMEPDGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQILS 180
Query: 181 LLTGAQLSHIFQQKQNYDLRRLLSGSERITDNLLQLMARDPSFLMGAARCLPLAAAVRDT 240
LLTGAQLSHIFQQKQNYDLRRLLSGSERITDNLLQLMARDPSFLMGAARCLPLAAAVRDT
Sbjct: 181 LLTGAQLSHIFQQKQNYDLRRLLSGSERITDNLLQLMARDPSFLMGAARCLPLAAAVRDT 240
Query: 241 VSASLQQARARSLVFSILLARNQLVALVRRKDQFLHPIDLHLLFNLISSSSSFREGEAWT 300
VSASLQQARARSLVFSILLARNQLVALVRRKDQFLHPIDLHLLFNLISSSSSFREGEAWT
Sbjct: 241 VSASLQQARARSLVFSILLARNQLVALVRRKDQFLHPIDLHLLFNLISSSSSFREGEAWT 300
Query: 301 PVCLPKFNAAGFFHAHISYLEPDTDLCLLLVSTDREDFFAVSDCRRRFQERLRKRGAHLA 360
PVCLPKFNAAGFFHAHISYLEPDTDLCLLLVSTDREDFFAVSDCRRRFQERLRKRGAHLA
Sbjct: 301 PVCLPKFNAAGFFHAHISYLEPDTDLCLLLVSTDREDFFAVSDCRRRFQERLRKRGAHLA 360
Query: 361 LREALRTPYYSVAQVGIPDLRHFLYKSKSSGLFTSPEIEAPYTSEEEQERLLGLYQYLHS 420
LREALRTPYYSVAQVGIPDLRHFLYKSKSSGLFTSPEIEAPYTSEEEQERLLGLYQYLHS
Sbjct: 361 LREALRTPYYSVAQVGIPDLRHFLYKSKSSGLFTSPEIEAPYTSEEEQERLLGLYQYLHS 420
Query: 421 RAHNASRPLKTIYYTGPNENLLAWVTGAFELYMCYSPLGTKASAVSAIHKLMRWIRKEED 480
RAHNASRPLKTIYYTGPNENLLAWVTGAFELYMCYSPLGTKASAVSAIHKLMRWIRKEED
Sbjct: 421 RAHNASRPLKTIYYTGPNENLLAWVTGAFELYMCYSPLGTKASAVSAIHKLMRWIRKEED 480
Query: 481 RLFILTPLTY 490
RLFILTPLTY
Sbjct: 481 RLFILTPLTY 490
>gi|215820630 MON1 homolog A isoform a [Homo sapiens]
Length = 652
Score = 694 bits (1790), Expect = 0.0
Identities = 351/356 (98%), Positives = 353/356 (99%)
Query: 135 QGMEPDGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQILSLLTGAQLSHIFQQK 194
+ + DGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQILSLLTGAQLSHIFQQK
Sbjct: 297 RSIHADGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQILSLLTGAQLSHIFQQK 356
Query: 195 QNYDLRRLLSGSERITDNLLQLMARDPSFLMGAARCLPLAAAVRDTVSASLQQARARSLV 254
QNYDLRRLLSGSERITDNLLQLMARDPSFLMGAARCLPLAAAVRDTVSASLQQARARSLV
Sbjct: 357 QNYDLRRLLSGSERITDNLLQLMARDPSFLMGAARCLPLAAAVRDTVSASLQQARARSLV 416
Query: 255 FSILLARNQLVALVRRKDQFLHPIDLHLLFNLISSSSSFREGEAWTPVCLPKFNAAGFFH 314
FSILLARNQLVALVRRKDQFLHPIDLHLLFNLISSSSSFREGEAWTPVCLPKFNAAGFFH
Sbjct: 417 FSILLARNQLVALVRRKDQFLHPIDLHLLFNLISSSSSFREGEAWTPVCLPKFNAAGFFH 476
Query: 315 AHISYLEPDTDLCLLLVSTDREDFFAVSDCRRRFQERLRKRGAHLALREALRTPYYSVAQ 374
AHISYLEPDTDLCLLLVSTDREDFFAVSDCRRRFQERLRKRGAHLALREALRTPYYSVAQ
Sbjct: 477 AHISYLEPDTDLCLLLVSTDREDFFAVSDCRRRFQERLRKRGAHLALREALRTPYYSVAQ 536
Query: 375 VGIPDLRHFLYKSKSSGLFTSPEIEAPYTSEEEQERLLGLYQYLHSRAHNASRPLKTIYY 434
VGIPDLRHFLYKSKSSGLFTSPEIEAPYTSEEEQERLLGLYQYLHSRAHNASRPLKTIYY
Sbjct: 537 VGIPDLRHFLYKSKSSGLFTSPEIEAPYTSEEEQERLLGLYQYLHSRAHNASRPLKTIYY 596
Query: 435 TGPNENLLAWVTGAFELYMCYSPLGTKASAVSAIHKLMRWIRKEEDRLFILTPLTY 490
TGPNENLLAWVTGAFELYMCYSPLGTKASAVSAIHKLMRWIRKEEDRLFILTPLTY
Sbjct: 597 TGPNENLLAWVTGAFELYMCYSPLGTKASAVSAIHKLMRWIRKEEDRLFILTPLTY 652
Score = 297 bits (760), Expect = 2e-80
Identities = 139/139 (100%), Positives = 139/139 (100%)
Query: 1 MHPGGGPSRAERLELGLGRERPAKAIFLHRRPGEGGGRERCLRCGHVCVRRGPGPREAVP 60
MHPGGGPSRAERLELGLGRERPAKAIFLHRRPGEGGGRERCLRCGHVCVRRGPGPREAVP
Sbjct: 1 MHPGGGPSRAERLELGLGRERPAKAIFLHRRPGEGGGRERCLRCGHVCVRRGPGPREAVP 60
Query: 61 SGRPRPDTLTPPWVRQRAVTGTFCASWTPLRNRRAQRMATDMQRKRSSECLDGTLTPSDG 120
SGRPRPDTLTPPWVRQRAVTGTFCASWTPLRNRRAQRMATDMQRKRSSECLDGTLTPSDG
Sbjct: 61 SGRPRPDTLTPPWVRQRAVTGTFCASWTPLRNRRAQRMATDMQRKRSSECLDGTLTPSDG 120
Query: 121 QSMERAESPTPGMAQGMEP 139
QSMERAESPTPGMAQGMEP
Sbjct: 121 QSMERAESPTPGMAQGMEP 139
>gi|7662354 MON1 homolog B [Homo sapiens]
Length = 547
Score = 320 bits (821), Expect = 1e-87
Identities = 176/371 (47%), Positives = 237/371 (63%), Gaps = 22/371 (5%)
Query: 140 DGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQILSLLTGAQLSHIFQQKQNYDL 199
+ +K+VF+++ PL+LVA++RT QSA +L ELL ++ QI+S LT A ++ IF KQNYDL
Sbjct: 159 EDHKLVFLQQGPLLLVAMSRTSQSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDL 218
Query: 200 RRLLSGSERITDNLLQLMARDP-SFLMGAARCLPLAAAVRDTVSASLQQARARSLVFSIL 258
RRLL+GSER D LL M +DP + L+GA RC+PLA +RD + A L++ A L S+L
Sbjct: 219 RRLLAGSERTLDRLLDSMEQDPGALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVL 278
Query: 259 LARNQLVALVRRKDQF----LHPIDLHLLFNLISSSSSFREGEAWTPVCLPKFNAAGFFH 314
+L+ + ++ L P DL LL + + + + F GEAW PVCLP+FN GFF+
Sbjct: 279 AVGGRLITAAQERNVLAECRLDPADLQLLLDWVGAPA-FAAGEAWAPVCLPRFNPDGFFY 337
Query: 315 AHISYLEPDTDLCLLLVSTDREDFFAVSDCRRRFQERLRKRGAHLALREALR-------- 366
A+++ L+ +CLLL+ T RE F A++ CRR ++ + GA AL EA
Sbjct: 338 AYVARLDA-MPVCLLLLGTQREAFHAMAACRRLVEDGMHALGAMRALGEAASFSNASSAS 396
Query: 367 TPYYSVAQVGIPDLRHFLYKS-------KSSGLFTSPEIEAPYTSEEEQERLLGLYQYLH 419
P YSV VG P LRHFLYK + FTSPE+EAPY+ EEE++RL LY LH
Sbjct: 397 APAYSVQAVGAPGLRHFLYKPLDIPDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLH 456
Query: 420 SRAHNASRPLKTIYYTGPNENLLAWVTGAFELYMCYSPLGTKASAVSAIHKLMRWIRKEE 479
+R H+ SRPL+ IY+ E LLAWVT FELY C SPL TKA A+ + KL+RW++KEE
Sbjct: 457 ARLHSTSRPLRLIYHVAEKETLLAWVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEE 516
Query: 480 DRLFILTPLTY 490
DRLFI P Y
Sbjct: 517 DRLFIRYPPKY 527
>gi|189011568 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 35.0 bits (79), Expect = 0.15
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 46 HVCVRRGPGPREAVPSGRPRPDTLTPPWVRQRAVTGTFCASWTPLRNRRAQRMATDMQRK 105
H V G + SG P + +V++ + + C S + L + ++ +A+ +Q +
Sbjct: 1349 HKAVEFSSGAKSPSKSGAQTPKSPPEHYVQETPLMFSRCTSVSSLDSFESRSIASSVQSE 1408
Query: 106 RSSECLDGTLTPSD-----GQSMERAESPTP 131
S + G ++PSD GQ+M + S TP
Sbjct: 1409 PCSGMVSGIISPSDLPDSPGQTMPPSRSKTP 1439
>gi|189011566 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 35.0 bits (79), Expect = 0.15
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 46 HVCVRRGPGPREAVPSGRPRPDTLTPPWVRQRAVTGTFCASWTPLRNRRAQRMATDMQRK 105
H V G + SG P + +V++ + + C S + L + ++ +A+ +Q +
Sbjct: 1349 HKAVEFSSGAKSPSKSGAQTPKSPPEHYVQETPLMFSRCTSVSSLDSFESRSIASSVQSE 1408
Query: 106 RSSECLDGTLTPSD-----GQSMERAESPTP 131
S + G ++PSD GQ+M + S TP
Sbjct: 1409 PCSGMVSGIISPSDLPDSPGQTMPPSRSKTP 1439
>gi|53759122 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 35.0 bits (79), Expect = 0.15
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 46 HVCVRRGPGPREAVPSGRPRPDTLTPPWVRQRAVTGTFCASWTPLRNRRAQRMATDMQRK 105
H V G + SG P + +V++ + + C S + L + ++ +A+ +Q +
Sbjct: 1349 HKAVEFSSGAKSPSKSGAQTPKSPPEHYVQETPLMFSRCTSVSSLDSFESRSIASSVQSE 1408
Query: 106 RSSECLDGTLTPSD-----GQSMERAESPTP 131
S + G ++PSD GQ+M + S TP
Sbjct: 1409 PCSGMVSGIISPSDLPDSPGQTMPPSRSKTP 1439
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 34.3 bits (77), Expect = 0.26
Identities = 51/175 (29%), Positives = 63/175 (36%), Gaps = 42/175 (24%)
Query: 3 PGGGPSRAERLELGLGRERPAKAIF---LHRRPGEGG-----GRERCLRCGHVCVRRGPG 54
P GGPSR+ER GL RP + L RR G GR RC +RG
Sbjct: 76 PPGGPSRSERPRAGL---RPGAFVSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGP 132
Query: 55 PREAVP-------SGRPRPDTLTP---PWVRQRAVTGTFCASWTPLRNRRAQRMATDMQR 104
R VP G P +P P R +G CA PL + +R
Sbjct: 133 ARAQVPPALRTFSPGPASPPRASPGGRPGSEARGRSGAECARRVPLHHGPPGASGVGSER 192
Query: 105 KRSSECLDGTLTPSDGQSMERAESPTPGMAQGMEPDGYKVVFVRRSPLVLVAVAR 159
R + TP+ G P PG++ GM R P+VL V R
Sbjct: 193 DRKFQLHQ---TPARG-------PPFPGIS-GM----------TRGPVVLSGVNR 226
Score = 30.4 bits (67), Expect = 3.8
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Query: 3 PGGGPSRAERLELG-LGRERPAKAIFLHRRPGEGGG 37
PG PSR+ LG G ERPA+A+ R PG GG
Sbjct: 232 PGASPSRS----LGEAGGERPARALRRPRAPGRAGG 263
>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 34.3 bits (77), Expect = 0.26
Identities = 51/175 (29%), Positives = 63/175 (36%), Gaps = 42/175 (24%)
Query: 3 PGGGPSRAERLELGLGRERPAKAIF---LHRRPGEGG-----GRERCLRCGHVCVRRGPG 54
P GGPSR+ER GL RP + L RR G GR RC +RG
Sbjct: 76 PPGGPSRSERPRAGL---RPGAFVSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGP 132
Query: 55 PREAVP-------SGRPRPDTLTP---PWVRQRAVTGTFCASWTPLRNRRAQRMATDMQR 104
R VP G P +P P R +G CA PL + +R
Sbjct: 133 ARAQVPPALRTFSPGPASPPRASPGGRPGSEARGRSGAECARRVPLHHGPPGASGVGSER 192
Query: 105 KRSSECLDGTLTPSDGQSMERAESPTPGMAQGMEPDGYKVVFVRRSPLVLVAVAR 159
R + TP+ G P PG++ GM R P+VL V R
Sbjct: 193 DRKFQLHQ---TPARG-------PPFPGIS-GM----------TRGPVVLSGVNR 226
Score = 30.4 bits (67), Expect = 3.8
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Query: 3 PGGGPSRAERLELG-LGRERPAKAIFLHRRPGEGGG 37
PG PSR+ LG G ERPA+A+ R PG GG
Sbjct: 232 PGASPSRS----LGEAGGERPARALRRPRAPGRAGG 263
>gi|214010165 rab11-family interacting protein 3 isoform 2 [Homo
sapiens]
Length = 460
Score = 32.0 bits (71), Expect = 1.3
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 104 RKRSSECLDGTLTPSDGQSMERAESPTPGMAQGMEPD-GYKVVFVRRSPLVLVA-VARTR 161
++ SS+ + L S +ME E P+P + +G E D KVVF+ R L L A T
Sbjct: 129 KRLSSKKVARYLHQSGALTMEALEDPSPELMEGPEEDIADKVVFLERRVLELEKDTAATG 188
Query: 162 QSAQELAQELLYIYYQILSL 181
+ L QE L + ++ +L
Sbjct: 189 EQHSRLRQENLQLVHRANAL 208
>gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo
sapiens]
Length = 756
Score = 32.0 bits (71), Expect = 1.3
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 104 RKRSSECLDGTLTPSDGQSMERAESPTPGMAQGMEPD-GYKVVFVRRSPLVLVA-VARTR 161
++ SS+ + L S +ME E P+P + +G E D KVVF+ R L L A T
Sbjct: 425 KRLSSKKVARYLHQSGALTMEALEDPSPELMEGPEEDIADKVVFLERRVLELEKDTAATG 484
Query: 162 QSAQELAQELLYIYYQILSL 181
+ L QE L + ++ +L
Sbjct: 485 EQHSRLRQENLQLVHRANAL 504
>gi|56121815 ADAM metallopeptidase with thrombospondin type 1 motif,
10 preproprotein [Homo sapiens]
Length = 1103
Score = 32.0 bits (71), Expect = 1.3
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 15/127 (11%)
Query: 36 GGRERCLRCGHVCVRRGPGPREAVPSGRPRPDTLT------PPWVRQRAVTGTF--CASW 87
G R R + C R P P+ +P P T+ PP R V G + C++
Sbjct: 963 GLRHRVVLCKSADHRATLPPAHCSPAAKP-PATMRCNLRRCPP---ARWVAGEWGECSAQ 1018
Query: 88 TPLRNRRAQRMATDMQRKRSSECLDGTLTPSDGQSMERAESPTPGMAQGMEPDGYKVVFV 147
+ R+ T + S EC + P+ Q + +SPTPG D KV +
Sbjct: 1019 CGVGQRQRSVRCTSHTGQASHECTEALRPPTTQQCEAKCDSPTPGDGPEECKDVNKVAY- 1077
Query: 148 RRSPLVL 154
PLVL
Sbjct: 1078 --CPLVL 1082
>gi|190343010 SP110 nuclear body protein isoform a [Homo sapiens]
Length = 689
Score = 31.6 bits (70), Expect = 1.7
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 94 RAQRMATDMQRK-RSSECLDGTLTPSDGQSMERAESPTPGMAQGMEPDGYKV 144
RAQ+ T+ RK RS E +DGT ++G+ ++ S + QG G+ +
Sbjct: 334 RAQKARTECARKSRSEEIIDGTSEMNEGKRSQKTPSTPRRVTQGAASPGHGI 385
>gi|190343008 SP110 nuclear body protein isoform b [Homo sapiens]
Length = 549
Score = 31.6 bits (70), Expect = 1.7
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 94 RAQRMATDMQRK-RSSECLDGTLTPSDGQSMERAESPTPGMAQGMEPDGYKV 144
RAQ+ T+ RK RS E +DGT ++G+ ++ S + QG G+ +
Sbjct: 334 RAQKARTECARKSRSEEIIDGTSEMNEGKRSQKTPSTPRRVTQGAASPGHGI 385
>gi|190343006 SP110 nuclear body protein isoform c [Homo sapiens]
Length = 713
Score = 31.6 bits (70), Expect = 1.7
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 94 RAQRMATDMQRK-RSSECLDGTLTPSDGQSMERAESPTPGMAQGMEPDGYKV 144
RAQ+ T+ RK RS E +DGT ++G+ ++ S + QG G+ +
Sbjct: 334 RAQKARTECARKSRSEEIIDGTSEMNEGKRSQKTPSTPRRVTQGAASPGHGI 385
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 31.2 bits (69), Expect = 2.2
Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Query: 49 VRRGPG-PREAVPSGRPRPDTLTP 71
V +GPG P A+P RPRPD+L+P
Sbjct: 525 VGKGPGAPPSALPGPRPRPDSLSP 548
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 31.2 bits (69), Expect = 2.2
Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Query: 49 VRRGPG-PREAVPSGRPRPDTLTP 71
V +GPG P A+P RPRPD+L+P
Sbjct: 525 VGKGPGAPPSALPGPRPRPDSLSP 548
>gi|110347431 latent transforming growth factor beta binding protein
4 isoform a [Homo sapiens]
Length = 1624
Score = 31.2 bits (69), Expect = 2.2
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 13/104 (12%)
Query: 7 PSRAERLELGLGRERPAKAIFLHRRPGEGGGRERCLRCGHVCVRRGPGPREAVPSGR--- 63
PS ++ +E+ RPA PG+ R RC+R C R P++ R
Sbjct: 32 PSPSQVVEVPGVPSRPASVAVCRCCPGQTSRRSRCIRA--FCRVRSCQPKKCAGPQRCLN 89
Query: 64 PRPDTLTP-PWVRQRAVTGTFCASWTPLRNRRAQRMATDMQRKR 106
P P +P P VR+R V+ +W PL + A+ + ++R+R
Sbjct: 90 PVPAVPSPSPSVRKRQVS----LNWQPLTLQEARAL---LKRRR 126
>gi|169213067 PREDICTED: hypothetical protein [Homo sapiens]
Length = 303
Score = 30.4 bits (67), Expect = 3.8
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Query: 3 PGGGPSRAERLELG-LGRERPAKAIFLHRRPGEGGG 37
PG PSR+ LG G ERPA+A+ R PG GG
Sbjct: 227 PGASPSRS----LGEAGGERPARALRRPRAPGRAGG 258
>gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens]
Length = 4967
Score = 30.0 bits (66), Expect = 5.0
Identities = 21/100 (21%), Positives = 42/100 (42%)
Query: 262 NQLVALVRRKDQFLHPIDLHLLFNLISSSSSFREGEAWTPVCLPKFNAAGFFHAHISYLE 321
+ LV + L D+ L ++SS +F+E + + K + +H Y +
Sbjct: 4001 DMLVESSNNVEMILKFFDMFLKLKDLTSSDTFKEYDPDGKGVISKRDFHKAMESHKHYTQ 4060
Query: 322 PDTDLCLLLVSTDREDFFAVSDCRRRFQERLRKRGAHLAL 361
+T+ L TD + + +RF E + G ++A+
Sbjct: 4061 SETEFLLSCAETDENETLDYEEFVKRFHEPAKDIGFNVAV 4100
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 30.0 bits (66), Expect = 5.0
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 51 RGPGPREAVPSGRPRPDTLTPPWVRQRAVTGTFCASWTPLRNRRAQRMATDMQRKRSSEC 110
RG G +A PS P V R C+S + L + + +A+ + + S
Sbjct: 1135 RGLGVEDATPSSSSENYVQETPLVLSR------CSSVSSLGSFESPSIASSIPSEPCSGQ 1188
Query: 111 LDGTLTPSD-----GQSMERAESPTPGMA 134
GT++PS+ GQ+M + S TP +A
Sbjct: 1189 GSGTISPSELPDSPGQTMPPSRSKTPPLA 1217
>gi|13376247 zinc finger protein 672 [Homo sapiens]
Length = 452
Score = 30.0 bits (66), Expect = 5.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 23 AKAIFLHRRPGEGGGRERCLRCGHVCVR 50
+ + H R G GR RCL CG C R
Sbjct: 26 SSVLLRHERAHGGDGRFRCLECGERCAR 53
>gi|157278361 nuclear localized factor 2 [Homo sapiens]
Length = 364
Score = 30.0 bits (66), Expect = 5.0
Identities = 29/104 (27%), Positives = 39/104 (37%), Gaps = 7/104 (6%)
Query: 33 GEGGGRERCLRCGHVCVRRGPGPREAVPSGRPR-PDTLTPPWVRQ----RAVTGTFCASW 87
G GGG + L G +C RGPGP G PR P R+ R G +
Sbjct: 131 GGGGGPDAPL--GTLCGPRGPGPATPAAPGGPRLPQDALAAGPRRCRLLRVPDGLLSRAL 188
Query: 88 TPLRNRRAQRMATDMQRKRSSECLDGTLTPSDGQSMERAESPTP 131
R+RR R+ + E G+ +P+ S S P
Sbjct: 189 RAGRSRRLARVRSVSSGNEDEERRAGSESPARAPSSSPLSSRAP 232
>gi|55742730 storkhead box 2 [Homo sapiens]
Length = 926
Score = 30.0 bits (66), Expect = 5.0
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 64 PRPDTLTPP---WVRQRAVTGTFCASWTPLRNRRAQRMATDMQRKRSSECLDGTLTPS 118
P+P T+TP VR+R + C S R A +QRK + +C D PS
Sbjct: 173 PQPGTITPSASGCVRERTLPRNHCDSCHCCREDVHSTHAPTLQRKSAKDCKDPYCPPS 230
>gi|30023818 tripartite motif protein 50A [Homo sapiens]
Length = 487
Score = 29.6 bits (65), Expect = 6.5
Identities = 37/145 (25%), Positives = 54/145 (37%), Gaps = 24/145 (16%)
Query: 292 SFREGEAWT--PVCLPKFNAAGFFHAHISYLEPDTDLCLLLVSTDREDFFAVSDCRRRFQ 349
S E E W P+CL F SY + CL+ +S + CR+
Sbjct: 6 SLLELEDWLQCPICLEVFKEPLMLQCGHSYCKG----CLVSLSCHLDAELRCPVCRQAVD 61
Query: 350 ERLRKRGAHLA-LREALRTPYYSVAQVGIPDLRHFLYKSKSSGLFTSPEIEAPYTSEEEQ 408
LA + EALR P G P+ + ++ LF E++Q
Sbjct: 62 GSSSLPNVSLARVIEALRLP-------GDPEPKVCVHHRNPLSLFC----------EKDQ 104
Query: 409 ERLLGLYQYLHSRAHNASRPLKTIY 433
E + GL L S H+ P+ T+Y
Sbjct: 105 ELICGLCGLLGSHQHHPVTPVSTVY 129
>gi|24307963 zinc finger, DHHC-type containing 1 [Homo sapiens]
Length = 485
Score = 29.6 bits (65), Expect = 6.5
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 37 GRERCLRCGHV---CVRRGPGPREAVPSGR--PRPDTLTPPWVRQRAVTGTFCASWTPLR 91
GR C++C + RRG GP A P+ R PR L P T + WT +
Sbjct: 393 GRGACIKCERLRPRIRRRGLGPPAAAPARRRIPRTPALCTPLALPAPTTRRRQSPWTRFQ 452
Query: 92 NRR 94
RR
Sbjct: 453 WRR 455
>gi|147903292 nuclear localized factor 1 [Homo sapiens]
Length = 369
Score = 29.6 bits (65), Expect = 6.5
Identities = 33/114 (28%), Positives = 45/114 (39%), Gaps = 8/114 (7%)
Query: 33 GEGGGRERCLRCGHVCVRRGPGPREAVPSGRPRP--DTLT--PPWVR-QRAVTGTFCASW 87
G GGG + L G + V R PGP G PRP D L P R R G +
Sbjct: 136 GGGGGPDALL--GTLRVPRAPGPATPAAPGCPRPPQDALARRPRGCRLLRVPDGLLSRAL 193
Query: 88 TPLRNRRAQRMATDMQRKRSSECLDGTLTPSDGQSMERAESPTPGMAQGMEPDG 141
R+RR R+ + E G+ +P+ S S P + +E +G
Sbjct: 194 RAGRSRRLTRVRSVSSGNEDKERRAGSQSPARAPSTSPPSSRVP-FPERLEAEG 246
>gi|238859651 pleckstrin homology domain containing family A member
4 isoform 1 [Homo sapiens]
Length = 779
Score = 29.3 bits (64), Expect = 8.5
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 388 KSSGLFTSPEIEAPY--TSEEEQERLLGLYQYLHSRA 422
+SSG ++SP PY TSE +ER+L L Q L + A
Sbjct: 648 RSSGSWSSPRNTTPYLPTSEGHRERVLSLSQALATEA 684
>gi|166999613 FBJ murine osteosarcoma viral oncogene homolog B
isoform 1 [Homo sapiens]
Length = 338
Score = 29.3 bits (64), Expect = 8.5
Identities = 27/102 (26%), Positives = 37/102 (36%), Gaps = 14/102 (13%)
Query: 52 GPGPREAVPSG--RPRPDTLTPPWVRQRAVTGTFCASWTPLRNRRAQRMATDMQRKRSSE 109
GPGP + RPR +TLTP +R V R ++A R R E
Sbjct: 131 GPGPARPARARPRRPREETLTPEEEEKRRV------------RRERNKLAAAKCRNRRRE 178
Query: 110 CLDGTLTPSDGQSMERAESPTPGMAQGMEPDGYKVVFVRRSP 151
D +D E+AE + E + + V V P
Sbjct: 179 LTDRLQAETDQLEEEKAELESEIAELQKEKERLEFVLVAHKP 220
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 29.3 bits (64), Expect = 8.5
Identities = 33/92 (35%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Query: 4 GGGPSRAERLEL-GLGRERPAKAIFLHRRP-GEGGGRERCLRCGHVCVRRGP-GPREAVP 60
GGGP R + G R+ + RRP G GG R G GP GPR P
Sbjct: 143 GGGPGLPPRGKASGPARDSAQQRRRPTRRPRGTRGGARRPGVRGQGAAAVGPTGPR---P 199
Query: 61 SGRPRPDTLTPPWVRQRAVTGTFCAS-WTPLR 91
+G P P TPP +R + S WTP R
Sbjct: 200 TGAP-PSRRTPPPGPRRPLRSPHSGSGWTPAR 230
>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 29.3 bits (64), Expect = 8.5
Identities = 33/92 (35%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Query: 4 GGGPSRAERLEL-GLGRERPAKAIFLHRRP-GEGGGRERCLRCGHVCVRRGP-GPREAVP 60
GGGP R + G R+ + RRP G GG R G GP GPR P
Sbjct: 143 GGGPGLPPRGKASGPARDSAQQRRRPTRRPRGTRGGARRPGVRGQGAAAVGPTGPR---P 199
Query: 61 SGRPRPDTLTPPWVRQRAVTGTFCAS-WTPLR 91
+G P P TPP +R + S WTP R
Sbjct: 200 TGAP-PSRRTPPPGPRRPLRSPHSGSGWTPAR 230
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.136 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,069,149
Number of Sequences: 37866
Number of extensions: 1000321
Number of successful extensions: 3073
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 3047
Number of HSP's gapped (non-prelim): 48
length of query: 490
length of database: 18,247,518
effective HSP length: 106
effective length of query: 384
effective length of database: 14,233,722
effective search space: 5465749248
effective search space used: 5465749248
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.