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Search of human proteins with 21389517
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21389517 gammaN-crystallin [Homo sapiens]
(182 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21389517 gammaN-crystallin [Homo sapiens] 395 e-110
gi|16936542 crystallin, beta A2 [Homo sapiens] 109 1e-24
gi|16936540 crystallin, beta A2 [Homo sapiens] 109 1e-24
gi|7019357 crystallin, beta A2 [Homo sapiens] 109 1e-24
gi|12056461 crystallin, beta A3 [Homo sapiens] 103 1e-22
gi|4503061 crystallin, beta B1 [Homo sapiens] 99 2e-21
gi|8922120 crystallin, gamma S [Homo sapiens] 97 8e-21
gi|10518338 crystallin, gamma C [Homo sapiens] 95 3e-20
gi|148491074 crystallin, gamma B [Homo sapiens] 93 1e-19
gi|13377002 crystallin, gamma D [Homo sapiens] 92 2e-19
gi|4758074 crystallin, beta B3 [Homo sapiens] 91 5e-19
gi|4503059 crystallin, beta A4 [Homo sapiens] 85 3e-17
gi|148491057 crystallin, gamma A [Homo sapiens] 83 1e-16
gi|4503063 crystallin, beta B2 [Homo sapiens] 81 6e-16
gi|90403579 beta-gamma crystallin domain containing 3 [Homo sapi... 72 2e-13
gi|62988361 absent in melanoma 1 [Homo sapiens] 67 1e-11
gi|89886227 absent in melanoma 1-like [Homo sapiens] 60 1e-09
gi|22748711 hypothetical protein LOC122046 [Homo sapiens] 28 4.4
gi|21450645 tetratricopeptide repeat domain 16 [Homo sapiens] 28 5.7
gi|150378498 fragile site-associated protein [Homo sapiens] 27 9.7
>gi|21389517 gammaN-crystallin [Homo sapiens]
Length = 182
Score = 395 bits (1015), Expect = e-110
Identities = 182/182 (100%), Positives = 182/182 (100%)
Query: 1 MAQRSGKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQ 60
MAQRSGKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQ
Sbjct: 1 MAQRSGKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQ 60
Query: 61 QFILEHGDYPDFFRWNSHSDHMGSCRPVGMHGEHFRLEIFEGCNFTGQCLEFLEDSPFLQ 120
QFILEHGDYPDFFRWNSHSDHMGSCRPVGMHGEHFRLEIFEGCNFTGQCLEFLEDSPFLQ
Sbjct: 61 QFILEHGDYPDFFRWNSHSDHMGSCRPVGMHGEHFRLEIFEGCNFTGQCLEFLEDSPFLQ 120
Query: 121 SRGWVKNCVNTIKVYGDGAAWSPRSFGAEDFQLSSSLQSDQGPEEATTKPATTQPPFLTA 180
SRGWVKNCVNTIKVYGDGAAWSPRSFGAEDFQLSSSLQSDQGPEEATTKPATTQPPFLTA
Sbjct: 121 SRGWVKNCVNTIKVYGDGAAWSPRSFGAEDFQLSSSLQSDQGPEEATTKPATTQPPFLTA 180
Query: 181 NL 182
NL
Sbjct: 181 NL 182
>gi|16936542 crystallin, beta A2 [Homo sapiens]
Length = 197
Score = 109 bits (272), Expect = 1e-24
Identities = 58/140 (41%), Positives = 82/140 (58%), Gaps = 9/140 (6%)
Query: 8 ITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEHG 67
+TL++ + F G++ + DC N +RG + RV S+ VE+G WV F +PDF+GQQFILE G
Sbjct: 14 LTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFILEKG 73
Query: 68 DYPDFFRWNSHSDH----MGSCRPV--GMHGEHFRLEIFEGCNFTGQCLEFLEDSPFLQS 121
DYP + W+ S H + S RPV H + R+ +FEG NF G + ++D P L S
Sbjct: 74 DYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDS-RVTLFEGDNFQGCKFDLVDDYPSLPS 132
Query: 122 RGWVKNCVNTIKVYGDGAAW 141
GW V ++KV AW
Sbjct: 133 MGWASKDVGSLKV--SSGAW 150
Score = 53.5 bits (127), Expect = 1e-07
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 7 KITLYEGKHFTGQKLEVFGDCDNFQDRGFMNR-VNSIHVESGAWVCFNHPDFRGQQFILE 65
++TL+EG +F G K ++ D + G+ ++ V S+ V SGAWV + +P +RG Q++LE
Sbjct: 107 RVTLFEGDNFQGCKFDLVDDYPSLPSMGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLE 166
>gi|16936540 crystallin, beta A2 [Homo sapiens]
Length = 197
Score = 109 bits (272), Expect = 1e-24
Identities = 58/140 (41%), Positives = 82/140 (58%), Gaps = 9/140 (6%)
Query: 8 ITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEHG 67
+TL++ + F G++ + DC N +RG + RV S+ VE+G WV F +PDF+GQQFILE G
Sbjct: 14 LTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFILEKG 73
Query: 68 DYPDFFRWNSHSDH----MGSCRPV--GMHGEHFRLEIFEGCNFTGQCLEFLEDSPFLQS 121
DYP + W+ S H + S RPV H + R+ +FEG NF G + ++D P L S
Sbjct: 74 DYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDS-RVTLFEGDNFQGCKFDLVDDYPSLPS 132
Query: 122 RGWVKNCVNTIKVYGDGAAW 141
GW V ++KV AW
Sbjct: 133 MGWASKDVGSLKV--SSGAW 150
Score = 53.5 bits (127), Expect = 1e-07
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 7 KITLYEGKHFTGQKLEVFGDCDNFQDRGFMNR-VNSIHVESGAWVCFNHPDFRGQQFILE 65
++TL+EG +F G K ++ D + G+ ++ V S+ V SGAWV + +P +RG Q++LE
Sbjct: 107 RVTLFEGDNFQGCKFDLVDDYPSLPSMGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLE 166
>gi|7019357 crystallin, beta A2 [Homo sapiens]
Length = 197
Score = 109 bits (272), Expect = 1e-24
Identities = 58/140 (41%), Positives = 82/140 (58%), Gaps = 9/140 (6%)
Query: 8 ITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEHG 67
+TL++ + F G++ + DC N +RG + RV S+ VE+G WV F +PDF+GQQFILE G
Sbjct: 14 LTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFILEKG 73
Query: 68 DYPDFFRWNSHSDH----MGSCRPV--GMHGEHFRLEIFEGCNFTGQCLEFLEDSPFLQS 121
DYP + W+ S H + S RPV H + R+ +FEG NF G + ++D P L S
Sbjct: 74 DYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDS-RVTLFEGDNFQGCKFDLVDDYPSLPS 132
Query: 122 RGWVKNCVNTIKVYGDGAAW 141
GW V ++KV AW
Sbjct: 133 MGWASKDVGSLKV--SSGAW 150
Score = 53.5 bits (127), Expect = 1e-07
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 7 KITLYEGKHFTGQKLEVFGDCDNFQDRGFMNR-VNSIHVESGAWVCFNHPDFRGQQFILE 65
++TL+EG +F G K ++ D + G+ ++ V S+ V SGAWV + +P +RG Q++LE
Sbjct: 107 RVTLFEGDNFQGCKFDLVDDYPSLPSMGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLE 166
>gi|12056461 crystallin, beta A3 [Homo sapiens]
Length = 215
Score = 103 bits (256), Expect = 1e-22
Identities = 55/140 (39%), Positives = 82/140 (58%), Gaps = 8/140 (5%)
Query: 7 KITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEH 66
KIT+Y+ ++F G+++E C N +R F N V S+ VESGAW+ + H F GQQFILE
Sbjct: 32 KITIYDQENFQGKRMEFTSSCPNVSERSFDN-VRSLKVESGAWIGYEHTSFCGQQFILER 90
Query: 67 GDYPDFFRWNS----HSDHMGSCRPV-GMHGEHFRLEIFEGCNFTGQCLEFLEDSPFLQS 121
G+YP + W+ H + + S RP+ + + ++ IFE NF G+ E +D P LQ+
Sbjct: 91 GEYPRWDAWSGSNAYHIERLMSFRPICSANHKESKMTIFEKENFIGRQWEISDDYPSLQA 150
Query: 122 RGWVKNCVNTIKVYGDGAAW 141
GW N V ++K+ AW
Sbjct: 151 MGWFNNEVGSMKI--QSGAW 168
Score = 68.9 bits (167), Expect = 2e-12
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 RSGKITLYEGKHFTGQKLEVFGDCDNFQDRG-FMNRVNSIHVESGAWVCFNHPDFRGQQF 62
+ K+T++E ++F G++ E+ D + Q G F N V S+ ++SGAWVC+ +P +RG Q+
Sbjct: 122 KESKMTIFEKENFIGRQWEISDDYPSLQAMGWFNNEVGSMKIQSGAWVCYQYPGYRGYQY 181
Query: 63 ILE----HGDYPDFFRWNSHS 79
ILE GDY + W SH+
Sbjct: 182 ILECDHHGGDYKHWREWGSHA 202
>gi|4503061 crystallin, beta B1 [Homo sapiens]
Length = 252
Score = 99.0 bits (245), Expect = 2e-21
Identities = 52/131 (39%), Positives = 81/131 (61%), Gaps = 5/131 (3%)
Query: 7 KITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEH 66
++ ++E ++F G++ E G+C N DRGF +RV SI V +G WV F +FRG+ FILE
Sbjct: 60 RLVVFELENFQGRRAEFSGECSNLADRGF-DRVRSIIVSAGPWVAFEQSNFRGEMFILEK 118
Query: 67 GDYPDFFRWNS--HSDHMGSCRPVGMHGEHFRLEIFEGCNFTGQCLEFL-EDSPFLQSRG 123
G+YP + W+S SD + S RP+ M + ++ +FEG NF G +E +D+P L G
Sbjct: 119 GEYPRWNTWSSSYRSDRLMSFRPIKMDAQEHKISLFEGANFKGNTIEIQGDDAPSLWVYG 178
Query: 124 WVKNCVNTIKV 134
+ + V ++KV
Sbjct: 179 F-SDRVGSVKV 188
Score = 67.8 bits (164), Expect = 5e-12
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 1 MAQRSGKITLYEGKHFTGQKLEVFGD-CDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRG 59
M + KI+L+EG +F G +E+ GD + GF +RV S+ V SG WV + +P +RG
Sbjct: 144 MDAQEHKISLFEGANFKGNTIEIQGDDAPSLWVYGFSDRVGSVKVSSGTWVGYQYPGYRG 203
Query: 60 QQFILEHGDYPDFFRWNSHSDHMGSCR 86
Q++LE GD+ + W + M S R
Sbjct: 204 YQYLLEPGDFRHWNEWGAFQPQMQSLR 230
>gi|8922120 crystallin, gamma S [Homo sapiens]
Length = 178
Score = 97.1 bits (240), Expect = 8e-21
Identities = 46/123 (37%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
Query: 1 MAQRSGKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQ 60
M++ KIT YE K+F G++ + DC +F +++R NSI VE G W + P+F G
Sbjct: 1 MSKTGTKITFYEDKNFQGRRYDCDCDCADFHT--YLSRCNSIKVEGGTWAVYERPNFAGY 58
Query: 61 QFILEHGDYPDFFRWNSHSDHMGSCRPVGM-HGEHFRLEIFEGCNFTGQCLEFLEDSPFL 119
+IL G+YP++ RW +D + SCR V + G ++++IFE +F+GQ E ED P +
Sbjct: 59 MYILPQGEYPEYQRWMGLNDRLSSCRAVHLPSGGQYKIQIFEKGDFSGQMYETTEDCPSI 118
Query: 120 QSR 122
+
Sbjct: 119 MEQ 121
Score = 53.9 bits (128), Expect = 7e-08
Identities = 24/82 (29%), Positives = 44/82 (53%)
Query: 7 KITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEH 66
KI ++E F+GQ E DC + ++ M ++S V G W+ + P++RG+Q++L+
Sbjct: 95 KIQIFEKGDFSGQMYETTEDCPSIMEQFHMREIHSCKVLEGVWIFYELPNYRGRQYLLDK 154
Query: 67 GDYPDFFRWNSHSDHMGSCRPV 88
+Y W + S + S R +
Sbjct: 155 KEYRKPIDWGAASPAVQSFRRI 176
>gi|10518338 crystallin, gamma C [Homo sapiens]
Length = 174
Score = 95.1 bits (235), Expect = 3e-20
Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 6 GKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILE 65
GKIT YE + F G+ E DC N Q + +R NSI VESG W+ + P+++GQQ++L
Sbjct: 2 GKITFYEDRAFQGRSYETTTDCPNLQP--YFSRCNSIRVESGCWMLYERPNYQGQQYLLR 59
Query: 66 HGDYPDFFRWNSHSDHMGSCRPVGMHGEHFRLEIFEGCNFTGQCLEFLEDSPFLQSR 122
G+YPD+ +W SD + SC + H RL ++E + G +E ED P +Q R
Sbjct: 60 RGEYPDYQQWMGLSDSIRSCCLIPQTVSH-RLRLYEREDHKGLMMELSEDCPSIQDR 115
Score = 60.5 bits (145), Expect = 8e-10
Identities = 28/84 (33%), Positives = 46/84 (54%)
Query: 5 SGKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFIL 64
S ++ LYE + G +E+ DC + QDR ++ + S+HV G WV + P++RG+Q++L
Sbjct: 87 SHRLRLYEREDHKGLMMELSEDCPSIQDRFHLSEIRSLHVLEGCWVLYELPNYRGRQYLL 146
Query: 65 EHGDYPDFFRWNSHSDHMGSCRPV 88
+Y W + GS R V
Sbjct: 147 RPQEYRRCQDWGAMDAKAGSLRRV 170
>gi|148491074 crystallin, gamma B [Homo sapiens]
Length = 175
Score = 93.2 bits (230), Expect = 1e-19
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Query: 6 GKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILE 65
GKIT YE + F G+ E DC N Q + +R NSI VESG W+ + P+++G Q+ L
Sbjct: 2 GKITFYEDRAFQGRSYECTTDCPNLQP--YFSRCNSIRVESGCWMIYERPNYQGHQYFLR 59
Query: 66 HGDYPDFFRWNSHSDHMGSCRPVGMHGEHFRLEIFEGCNFTGQCLEFLEDSPFLQSR 122
G+YPD+ +W SD + SC + H +R++I++ GQ E +D +Q R
Sbjct: 60 RGEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDR 116
Score = 63.9 bits (154), Expect = 7e-11
Identities = 26/82 (31%), Positives = 49/82 (59%)
Query: 7 KITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEH 66
++ +Y+ GQ E+ DC + QDR + ++S++V G+W+ + P++RG+Q++L
Sbjct: 90 RMKIYDRDELRGQMSELTDDCISVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRP 149
Query: 67 GDYPDFFRWNSHSDHMGSCRPV 88
G+Y F W + + +GS R V
Sbjct: 150 GEYRRFLDWGAPNAKVGSLRRV 171
>gi|13377002 crystallin, gamma D [Homo sapiens]
Length = 174
Score = 92.4 bits (228), Expect = 2e-19
Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Query: 6 GKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILE 65
GKITLYE + F G+ E D N Q +++R NS V+SG W+ + P++ G Q+ L
Sbjct: 2 GKITLYEDRGFQGRHYECSSDHPNLQP--YLSRCNSARVDSGCWMLYEQPNYSGLQYFLR 59
Query: 66 HGDYPDFFRWNSHSDHMGSCRPVGMHGEHFRLEIFEGCNFTGQCLEFLEDSPFLQSR 122
GDY D +W SD + SCR + G H R+ ++E ++ GQ +EF ED LQ R
Sbjct: 60 RGDYADHQQWMGLSDSVRSCRLIPHSGSH-RIRLYEREDYRGQMIEFTEDCSCLQDR 115
Score = 66.2 bits (160), Expect = 1e-11
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 5 SGKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFIL 64
S +I LYE + + GQ +E DC QDR N ++S++V G+WV + ++RG+Q++L
Sbjct: 87 SHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNYRGRQYLL 146
Query: 65 EHGDYPDFFRWNSHSDHMGSCRPV 88
GDY + W + + +GS R V
Sbjct: 147 MPGDYRRYQDWGATNARVGSLRRV 170
>gi|4758074 crystallin, beta B3 [Homo sapiens]
Length = 211
Score = 90.9 bits (224), Expect = 5e-19
Identities = 47/123 (38%), Positives = 75/123 (60%), Gaps = 4/123 (3%)
Query: 5 SGKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFIL 64
S K+ LYE ++F G++ E+ +C + D + +V SI VESG W+ F FRG+QF+L
Sbjct: 23 SYKVILYELENFQGKRCELSAECPSLTD-SLLEKVGSIQVESGPWLAFESRAFRGEQFVL 81
Query: 65 EHGDYPDFFRWNS--HSDHMGSCRPVGMHGEHFRLEIFEGCNFTGQCLEFLEDS-PFLQS 121
E GDYP + W++ SD + S RP+ + H +L +FE F+G+ +E ++D P L +
Sbjct: 82 EKGDYPRWDAWSNSRDSDSLLSLRPLNIDSPHHKLHLFENPAFSGRKMEIVDDDVPSLWA 141
Query: 122 RGW 124
G+
Sbjct: 142 HGF 144
Score = 59.3 bits (142), Expect = 2e-09
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 7 KITLYEGKHFTGQKLEVFGD-CDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILE 65
K+ L+E F+G+K+E+ D + GF +RV S+ +G WV + P +RG+Q++ E
Sbjct: 115 KLHLFENPAFSGRKMEIVDDDVPSLWAHGFQDRVASVRAINGTWVGYEFPGYRGRQYVFE 174
Query: 66 HGDYPDFFRWNSHSDHMGSCRPV 88
G+Y + W++ + S R +
Sbjct: 175 RGEYRHWNEWDASQPQLQSVRRI 197
>gi|4503059 crystallin, beta A4 [Homo sapiens]
Length = 196
Score = 85.1 bits (209), Expect = 3e-17
Identities = 55/152 (36%), Positives = 79/152 (51%), Gaps = 9/152 (5%)
Query: 7 KITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEH 66
K+ +++ F G++ E +C + + GF V S+ V SGAWV F H F+GQQ+ILE
Sbjct: 13 KMVVWDEDGFQGRRHEFTAECPSVLELGF-ETVRSLKVLSGAWVGFEHAGFQGQQYILER 71
Query: 67 GDYPDFFRWNSH----SDHMGSCRPVG-MHGEHFRLEIFEGCNFTGQCLEFLEDSPFLQS 121
G+YP + W + ++ + S RP + RL IFE NF G+ E +D P LQ+
Sbjct: 72 GEYPSWDAWGGNTAYPAERLTSFRPAACANHRDSRLTIFEQENFLGKKGELSDDYPSLQA 131
Query: 122 RGWVKNCVNTIKVYGDGAAWSPRSF-GAEDFQ 152
GW N V + V+ AW F G FQ
Sbjct: 132 MGWEGNEVGSFHVH--SGAWVCSQFPGYRGFQ 161
Score = 68.2 bits (165), Expect = 4e-12
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 4 RSGKITLYEGKHFTGQKLEVFGDCDNFQDRGFM-NRVNSIHVESGAWVCFNHPDFRGQQF 62
R ++T++E ++F G+K E+ D + Q G+ N V S HV SGAWVC P +RG Q+
Sbjct: 103 RDSRLTIFEQENFLGKKGELSDDYPSLQAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQY 162
Query: 63 ILE----HGDYPDFFRWNSHS 79
+LE GDY F W SH+
Sbjct: 163 VLECDHHSGDYKHFREWGSHA 183
>gi|148491057 crystallin, gamma A [Homo sapiens]
Length = 174
Score = 83.2 bits (204), Expect = 1e-16
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 6 GKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILE 65
GKIT YE + F G+ DC N R + +R NSI V+SG W+ + P+++G Q+ L
Sbjct: 2 GKITFYEDRDFQGRCYNCISDCPNL--RVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLR 59
Query: 66 HGDYPDFFRWNSHSDHMGSCRPVGMHGEHFRLEIFEGCNFTGQCLEFLED 115
G YPD+ W SD + SCR + H +L ++E ++ G E +D
Sbjct: 60 RGKYPDYQHWMGLSDSVQSCRII-PHTSSHKLRLYERDDYRGLMSELTDD 108
Score = 57.8 bits (138), Expect = 5e-09
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 5 SGKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFIL 64
S K+ LYE + G E+ DC + + + S+HV G WV + P++RG+Q++L
Sbjct: 87 SHKLRLYERDDYRGLMSELTDDCACVPELFRLPEIYSLHVLEGCWVLYEMPNYRGRQYLL 146
Query: 65 EHGDYPDFFRWNSHSDHMGSCRPV 88
GDY + W +GS R V
Sbjct: 147 RPGDYRRYHDWGGADAKVGSLRRV 170
>gi|4503063 crystallin, beta B2 [Homo sapiens]
Length = 205
Score = 80.9 bits (198), Expect = 6e-16
Identities = 39/131 (29%), Positives = 78/131 (59%), Gaps = 5/131 (3%)
Query: 7 KITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEH 66
KI ++E ++F G E+ G C N ++ G + + S+ V++G WV + + +G+QF+ E
Sbjct: 18 KIIIFEQENFQGHSHELNGPCPNLKETG-VEKAGSVLVQAGPWVGYEQANCKGEQFVFEK 76
Query: 67 GDYPDFFRWNS--HSDHMGSCRPVGMHGEHFRLEIFEGCNFTGQCLEFLEDS-PFLQSRG 123
G+YP + W S +D + S RP+ + + ++ ++E NFTG+ +E ++D P + G
Sbjct: 77 GEYPRWDSWTSSRRTDSLSSLRPIKVDSQEHKIILYENPNFTGKKMEIIDDDVPSFHAHG 136
Query: 124 WVKNCVNTIKV 134
+ + V++++V
Sbjct: 137 YQEK-VSSVRV 146
Score = 69.7 bits (169), Expect = 1e-12
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 KITLYEGKHFTGQKLEVFGD-CDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILE 65
KI LYE +FTG+K+E+ D +F G+ +V+S+ V+SG WV + +P +RG Q++LE
Sbjct: 108 KIILYENPNFTGKKMEIIDDDVPSFHAHGYQEKVSSVRVQSGTWVGYQYPGYRGLQYLLE 167
Query: 66 HGDYPD 71
GDY D
Sbjct: 168 KGDYKD 173
>gi|90403579 beta-gamma crystallin domain containing 3 [Homo
sapiens]
Length = 1022
Score = 72.4 bits (176), Expect = 2e-13
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Query: 8 ITLYEGKHFTGQKLEVFG-DCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEH 66
+TL+E +G+ +++ + + ++ GF ++ SIHV+SG WV + F G+Q+ILE
Sbjct: 626 VTLFESDLESGKFIDITNQEISDLEEIGFGSKTRSIHVKSGVWVAYQQKFFCGEQYILEK 685
Query: 67 GDYPDFFRWNSHSDHMGSCRPV-----GMHGEHFRLEIFEGCNFTGQCLEFLEDSPFLQS 121
G Y FF W ++ + S RP+ G++ L+ F F G+C++F E++ L S
Sbjct: 686 GKYKCFFDWGGSNNIIMSIRPIQLEPLGINEPPHLLKAFSKPGFQGECIDFTEETSDLTS 745
Score = 55.8 bits (133), Expect = 2e-08
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 7 KITLYEGKHFTGQKLEVFGDCDN----FQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQF 62
K+ +YE HF GQ E D+ ++ G +R+ SI V G WV + F+GQQF
Sbjct: 532 KVIIYEKPHFHGQAKEFSEHIDSVPNFLKNNGDFHRIGSIRVIGGVWVAYEKEHFKGQQF 591
Query: 63 ILEHGDYPD 71
+LE GD+ D
Sbjct: 592 LLEEGDFED 600
Score = 40.8 bits (94), Expect = 6e-04
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 8 ITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEHG 67
I+L+ +H G++L + ++ ++ S+ V+SG W+ + +F G+Q +L
Sbjct: 806 ISLFALEHCEGRELHLEEAVNSVLNKDLHFYTQSVWVKSGLWIAYEGSNFLGRQILLRPN 865
Query: 68 DYPD---FFRWNSHSDHMGSCRPVGMHGEHFRLE 98
+ P+ F RW + +GS RP+ + R++
Sbjct: 866 EIPNWTAFSRWKT----IGSLRPMKQPAVYIRIK 895
Score = 40.0 bits (92), Expect = 0.001
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 4 RSGKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFI 63
R GK+ +Y+ H + K EV+ + + F N V I V G W+ + P FRGQ+ +
Sbjct: 345 RPGKMVIYD-LHESTYKQEVYCNIPDATSWSFPNGV-LIKVVRGCWILYEKPHFRGQKCV 402
Query: 64 LEHGD 68
LE G+
Sbjct: 403 LEEGE 407
Score = 36.2 bits (82), Expect = 0.016
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 14/140 (10%)
Query: 41 SIHVESGAWVCFNHPDFRGQQFILEHGDYPDFFRWNSHSDHMGSCRPVGMHG------EH 94
S V+SG W+ + +F+GQ +LE D + + M S P+ M G +
Sbjct: 475 SFTVKSGVWLAYPDINFKGQATVLEE----DHGLFEISTAEMKSLHPLQMGGLKVEMPMN 530
Query: 95 FRLEIFEGCNFTGQCLEFLE--DS--PFLQSRGWVKNCVNTIKVYGDGAAWSPRSFGAED 150
++ I+E +F GQ EF E DS FL++ G + + G A+ F +
Sbjct: 531 LKVIIYEKPHFHGQAKEFSEHIDSVPNFLKNNGDFHRIGSIRVIGGVWVAYEKEHFKGQQ 590
Query: 151 FQLSSSLQSDQGPEEATTKP 170
F L D A + P
Sbjct: 591 FLLEEGDFEDSNACGALSSP 610
>gi|62988361 absent in melanoma 1 [Homo sapiens]
Length = 1723
Score = 66.6 bits (161), Expect = 1e-11
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 4 RSGKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFI 63
R I L+ G F D + Q G M + S+ V G W+ + P F+G FI
Sbjct: 1121 RVSHIDLFTEPEGLGILSSYFDDTEEMQGFGVMQKTCSMKVHWGTWLIYEEPGFQGVPFI 1180
Query: 64 LEHGDYPDFFRWNSHSDHMGSCRPVGMHGEHF------RLEIFEGCNFTGQCLE 111
LE G+YPD W++ + ++GS RP+ M G ++ ++E F G+C+E
Sbjct: 1181 LEPGEYPDLSFWDTEAAYIGSMRPLKMGGRKVEFPTDPKVVVYEKPFFEGKCVE 1234
Score = 63.5 bits (153), Expect = 9e-11
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Query: 10 LYEGKHF--TGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEHG 67
+Y K+F G ++V G N ++ G+ + SI+V SG WV + +PDF G+Q+IL+ G
Sbjct: 1323 MYSEKNFGSKGSSIDVLGIVANLKETGYGVKTQSINVLSGVWVAYENPDFTGEQYILDKG 1382
Query: 68 DYPDFFRWNSHSDHMGSCRPVGMHG-----EHFRLEIFEGCNFTGQCLEFLEDSPFLQSR 122
Y F W + + S +P+ + ++ +F F G F E + +
Sbjct: 1383 FYTSFEDWGGKNCKISSVQPICLDSFTGPRRRNQIHLFSEPQFQGHSQSFEETTSQIDDS 1442
Query: 123 GWVKNC 128
K+C
Sbjct: 1443 FSTKSC 1448
Score = 59.3 bits (142), Expect = 2e-09
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 8 ITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEHG 67
I L+E + F G+K+E+ + N + GF ++ S+ V G WV + + +RG+QF+L
Sbjct: 1504 IILFEREDFKGKKIELNAETVNLRSLGFNTQIRSVQVIGGIWVTYEYGSYRGRQFLLSPA 1563
Query: 68 DYPDFFRWNSHSDHMGSCRPVGMHGEHFRL 97
+ P+++ + S +GS RP +FRL
Sbjct: 1564 EVPNWYEF-SGCRQIGSLRPFVQKRIYFRL 1592
Score = 50.8 bits (120), Expect = 6e-07
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 7 KITLYEGKHFTGQKLEV-FGDCDNFQDRGFMNR-----------VNSIHVESGAWVCFNH 54
K+ +YE F G+ +E+ G C + G V S+ V G WV +
Sbjct: 1219 KVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGDDHLPFTSVGSMKVLRGIWVAYEK 1278
Query: 55 PDFRGQQFILEHGDYPDFFRWNSHSDHMGSCRPV 88
P F G Q++LE G+Y D+ W ++ + S RP+
Sbjct: 1279 PGFTGHQYLLEEGEYRDWKAWGGYNGELQSLRPI 1312
Score = 40.8 bits (94), Expect = 6e-04
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 7/147 (4%)
Query: 3 QRSGKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQF 62
+R +I L+ F G + F + + D F + S V G+WV ++ +F G Q+
Sbjct: 1412 RRRNQIHLFSEPQFQGHS-QSFEETTSQIDDSFSTK--SCRVSGGSWVVYDGENFTGNQY 1468
Query: 63 ILEHGDYPDFFRWN-SHSDHMGSCRPVGMHGEHFRLEIFEGCNFTGQCLEFLEDSPFLQS 121
+LE G YP S R + + + +FE +F G+ +E ++ L+S
Sbjct: 1469 VLEEGHYPCLSAMGCPPGATFKSLRFIDVEFSEPTIILFEREDFKGKKIELNAETVNLRS 1528
Query: 122 RGWVKNCVNTIKVYGDGAAWSPRSFGA 148
G+ + +++V G W +G+
Sbjct: 1529 LGF-NTQIRSVQVI--GGIWVTYEYGS 1552
Score = 37.4 bits (85), Expect = 0.007
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 4 RSGKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFI 63
R GK+ +Y + + +EVF D + ++ V I V G W+ + P+F G
Sbjct: 1020 RPGKVVIYSEPDVSEKCIEVFSDIQDCSSWS-LSPVILIKVVRGCWILYEQPNFEGHSIP 1078
Query: 64 LEHGD 68
LE G+
Sbjct: 1079 LEEGE 1083
>gi|89886227 absent in melanoma 1-like [Homo sapiens]
Length = 616
Score = 59.7 bits (143), Expect = 1e-09
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 7 KITLYEGKHFTGQKLEVFGDCDNFQD-----RGFMNRVNSIHVESGAWVCFNHPDFRGQQ 61
+ +YE F G+ EV D N Q + V S+ V G WV + FRG Q
Sbjct: 124 RAVVYEAPGFQGRSWEVSRDIYNLQQPEDSQSPHLASVGSLRVLGGCWVGYEKEGFRGHQ 183
Query: 62 FILEHGDYPDFFRWNSHSDHMGSCRPVGMHGEHFRLEIFEGCNFTGQCLEFLEDSP 117
++LE G+YPD+ W + + + S R + + +FE +F G +E + P
Sbjct: 184 YLLEEGEYPDWSHWGGYDELLTSLRVIRTDFGDPAVVLFEAMDFEGHGVEVSKALP 239
Score = 57.0 bits (136), Expect = 9e-09
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 8 ITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEHG 67
+ L+E F G +EV + + +IHV SG WV + F G+Q++LE G
Sbjct: 219 VVLFEAMDFEGHGVEVSKALPDVELVQHGPSTQAIHVLSGVWVAYQEVGFSGEQYVLEKG 278
Query: 68 DYPDFFRWNSHSDHMGSCRP---VGMHGEHF--RLEIFEGCNFTGQCLEFLEDSPFLQSR 122
Y + W + + + S +P VG H HF ++++F +F G F +D L +
Sbjct: 279 VYRNCEDWGAGNSTLASLQPVLQVGEHDLHFVSKIQLFSRPDFLGDHFSFEDDQAALPAS 338
Query: 123 GWVKNC 128
++C
Sbjct: 339 FRPQSC 344
Score = 53.5 bits (127), Expect = 1e-07
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 8 ITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEHG 67
I LY + F G+++E+ + + Q GF N V S+ ++ G WV H DFRG+Q+++
Sbjct: 400 IFLYGLECFEGKEIELSREVRSLQAEGFNNHVLSVRIKGGIWVLCEHSDFRGRQWLVGSC 459
Query: 68 DYPDFFRWNSHSDHMGSCRPVGMHGEHFRL 97
+ ++ + S + +GS P+ +FRL
Sbjct: 460 EITNWLTY-SGTQRVGSLYPIKQRRVYFRL 488
Score = 44.3 bits (103), Expect = 6e-05
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 7 KITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEH 66
+I+L+ + G+++++ N Q +V S V +G W+ + P F +ILE
Sbjct: 29 EISLFSEEGLKGEQVKLTEALKNSQGLEKPLQVASATVSAGLWLLYPKPLFEDTPYILEP 88
Query: 67 GDYPDFFRWNSHSDHMGSCRP-------VGMHGEHFRLEIFEGCNFTGQCLEFLEDSPFL 119
G+YP W + +GS +P V GE R ++E F G+ E D L
Sbjct: 89 GEYPTSEAWGTSDPSVGSLKPMRLGCPSVEKPGEP-RAVVYEAPGFQGRSWEVSRDIYNL 147
Query: 120 Q 120
Q
Sbjct: 148 Q 148
Score = 42.7 bits (99), Expect = 2e-04
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 5/131 (3%)
Query: 7 KITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEH 66
KI L+ F G F D F R S V G+W+ F+ +F G Q IL
Sbjct: 312 KIQLFSRPDFLGDHFS-FEDDQAALPASF--RPQSCRVHGGSWILFDETNFEGDQHILSE 368
Query: 67 GDYPDFFRWNS-HSDHMGSCRPVGMHGEHFRLEIFEGCNFTGQCLEFLEDSPFLQSRGWV 125
G++P S +GS + V +H + ++ F G+ +E + LQ+ G+
Sbjct: 369 GEFPTLTAMGCLASTVLGSLQKVSLHFSEPSIFLYGLECFEGKEIELSREVRSLQAEGF- 427
Query: 126 KNCVNTIKVYG 136
N V ++++ G
Sbjct: 428 NNHVLSVRIKG 438
>gi|22748711 hypothetical protein LOC122046 [Homo sapiens]
Length = 289
Score = 28.1 bits (61), Expect = 4.4
Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 16/71 (22%)
Query: 63 ILEHGDYPDFFRWNSHSDH----MGSCRPVGMHGEHFRLEIFEGCNFTGQCLEFLEDSPF 118
IL Y D + W SHS + R + H H +I FL P
Sbjct: 66 ILNQTQYSDEYTWKSHSKEDLIKTETSRGIKSHKSHLNEDI------------FLWTLPH 113
Query: 119 LQSRGWVKNCV 129
Q G +KNC+
Sbjct: 114 CQQTGTLKNCL 124
>gi|21450645 tetratricopeptide repeat domain 16 [Homo sapiens]
Length = 873
Score = 27.7 bits (60), Expect = 5.7
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 126 KNCVNTIKVYGDGAAWSPRSFGAEDFQLSSSLQSDQGPEEATTKPATTQPP 176
+N T G G + S Q SS +++ QGP + +K TT+ P
Sbjct: 718 RNSSKTRATQGQGQSSSKTEATQGQRQSSSEIEATQGPRQEPSKTKTTRSP 768
>gi|150378498 fragile site-associated protein [Homo sapiens]
Length = 5005
Score = 26.9 bits (58), Expect = 9.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 41 SIHVESGAWVCFNHPDFRGQQFILEHGDYPDFFRW 75
S+H CF+ P+FR + + L H + P+ W
Sbjct: 4657 SLHGNHMTLACFHGPNFRSKSWALFHLEEPNIAFW 4691
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,056,410
Number of Sequences: 37866
Number of extensions: 375099
Number of successful extensions: 833
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 750
Number of HSP's gapped (non-prelim): 51
length of query: 182
length of database: 18,247,518
effective HSP length: 96
effective length of query: 86
effective length of database: 14,612,382
effective search space: 1256664852
effective search space used: 1256664852
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.