Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 21389447
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21389447 TBC1 domain family, member 20 [Homo sapiens]
(403 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21389447 TBC1 domain family, member 20 [Homo sapiens] 807 0.0
gi|194018478 TBC1 domain family, member 2B isoform a [Homo sapiens] 52 1e-06
gi|194018476 TBC1 domain family, member 2B isoform b [Homo sapiens] 52 1e-06
gi|139394668 TBC1 domain family, member 9 (with GRAM domain) [Ho... 47 3e-05
gi|23503283 TBC1 domain family, member 21 [Homo sapiens] 41 0.002
gi|34147456 TBC domain-containing protein kinase-like [Homo sapi... 40 0.004
gi|40068063 TBC1 domain family, member 22B [Homo sapiens] 39 0.006
gi|45597177 TBC1 domain family, member 9B (with GRAM domain) iso... 39 0.006
gi|45597175 TBC1 domain family, member 9B (with GRAM domain) iso... 39 0.006
gi|38570101 TBC1 domain family, member 8B (with GRAM domain) iso... 39 0.008
gi|156231067 TBC1 domain family, member 8 [Homo sapiens] 38 0.014
gi|109638751 ubiquitin specific protease 6 [Homo sapiens] 37 0.041
gi|226693407 TBC1 domain family, member 3H [Homo sapiens] 36 0.054
gi|157502205 TBC1 domain family, member 3G [Homo sapiens] 36 0.054
gi|90577185 TBC1 domain family member 3C [Homo sapiens] 36 0.071
gi|183583565 TBC1 domain family, member 3 [Homo sapiens] 35 0.12
gi|183583567 TBC1 domain family, member 3E [Homo sapiens] 35 0.12
gi|149999613 TBC1 domain family, member 3B [Homo sapiens] 35 0.12
gi|183583563 TBC1 domain family, member 3D [Homo sapiens] 35 0.12
gi|167234422 hematopoietic cell-specific Lyn substrate 1 [Homo s... 35 0.16
gi|14149985 TBC1 domain family, member 3F [Homo sapiens] 34 0.21
gi|239755792 PREDICTED: hypothetical protein [Homo sapiens] 34 0.27
gi|239750294 PREDICTED: hypothetical protein XP_002347346 [Homo ... 34 0.27
gi|239744603 PREDICTED: hypothetical protein XP_002343238 [Homo ... 34 0.27
gi|197304777 TBC1 domain family, member 5 isoform a [Homo sapiens] 33 0.35
gi|197304775 TBC1 domain family, member 5 isoform b [Homo sapiens] 33 0.35
gi|7661998 TBC1 domain family, member 5 isoform b [Homo sapiens] 33 0.35
gi|148235002 TBC1 domain family, member 26 [Homo sapiens] 33 0.46
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 31 2.3
gi|14150045 calcium/calmodulin-dependent protein kinase 1 alpha ... 30 3.0
>gi|21389447 TBC1 domain family, member 20 [Homo sapiens]
Length = 403
Score = 807 bits (2084), Expect = 0.0
Identities = 403/403 (100%), Positives = 403/403 (100%)
Query: 1 MALRSAQGDGPTSGHWDGGAEKADFNAKRKKKVAEIHQALNSDPTDVAALRRMAISEGGL 60
MALRSAQGDGPTSGHWDGGAEKADFNAKRKKKVAEIHQALNSDPTDVAALRRMAISEGGL
Sbjct: 1 MALRSAQGDGPTSGHWDGGAEKADFNAKRKKKVAEIHQALNSDPTDVAALRRMAISEGGL 60
Query: 61 LTDEIRRKVWPKLLNVNANDPPPISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQRE 120
LTDEIRRKVWPKLLNVNANDPPPISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQRE
Sbjct: 61 LTDEIRRKVWPKLLNVNANDPPPISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQRE 120
Query: 121 GLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLATSLVEKLSTHHLRDFMDP 180
GLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLATSLVEKLSTHHLRDFMDP
Sbjct: 121 GLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLATSLVEKLSTHHLRDFMDP 180
Query: 181 TMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTIFALSWLITWFGHVLSDFRHVVRLYD 240
TMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTIFALSWLITWFGHVLSDFRHVVRLYD
Sbjct: 181 TMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTIFALSWLITWFGHVLSDFRHVVRLYD 240
Query: 241 FFLACHPLMPIYFAAVIVLYREQEVLDCDCDMASVHHLLSQIPQDLPYETLISRAGDLFV 300
FFLACHPLMPIYFAAVIVLYREQEVLDCDCDMASVHHLLSQIPQDLPYETLISRAGDLFV
Sbjct: 241 FFLACHPLMPIYFAAVIVLYREQEVLDCDCDMASVHHLLSQIPQDLPYETLISRAGDLFV 300
Query: 301 QFPPSELAREAAAQQQAERTAASTFKDFELASAQQRPDMVLRQRFRGLLRPEDRTKDVLT 360
QFPPSELAREAAAQQQAERTAASTFKDFELASAQQRPDMVLRQRFRGLLRPEDRTKDVLT
Sbjct: 301 QFPPSELAREAAAQQQAERTAASTFKDFELASAQQRPDMVLRQRFRGLLRPEDRTKDVLT 360
Query: 361 KPRTNRFVKLAVMGLTVALGAAALAVVKSALEWAPKFQLQLFP 403
KPRTNRFVKLAVMGLTVALGAAALAVVKSALEWAPKFQLQLFP
Sbjct: 361 KPRTNRFVKLAVMGLTVALGAAALAVVKSALEWAPKFQLQLFP 403
>gi|194018478 TBC1 domain family, member 2B isoform a [Homo sapiens]
Length = 963
Score = 51.6 bits (122), Expect = 1e-06
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 87 KNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQR------EGLQEELIDIILLILERNPQL 140
K L + + +Q+ LD+ R+L P + EG+Q+ L +++L RNP +
Sbjct: 698 KALEKQNPASKQIELDLLRTL-------PNNKHYSCPTSEGIQK-LRNVLLAFSWRNPDI 749
Query: 141 HYYQGYHDIVVTFLLVVGERLAT-SLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQV 199
Y QG + +V LL + + A LV + RD+ T+ ++ ++ +
Sbjct: 750 GYCQGLNRLVAVALLYLEQEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFRDLMSEK 809
Query: 200 NPELHDFMQSAEVG-TIFALSW-LITWFGHVLSDFRHVVRLYDFFLACHPLMPIYFAAVI 257
P LH + +V T+ +W L+ + V+SD + +++D FL P + FA +
Sbjct: 810 LPRLHGHFEQYKVDYTLITFNWFLVVFVDSVVSDI--LFKIWDSFLYEGPKVIFRFALAL 867
Query: 258 VLYREQEVLDCDCDMASVHHL 278
Y+E+E+L M+ +L
Sbjct: 868 FKYKEEEILKLQDSMSIFKYL 888
>gi|194018476 TBC1 domain family, member 2B isoform b [Homo sapiens]
Length = 914
Score = 51.6 bits (122), Expect = 1e-06
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 87 KNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQR------EGLQEELIDIILLILERNPQL 140
K L + + +Q+ LD+ R+L P + EG+Q+ L +++L RNP +
Sbjct: 698 KALEKQNPASKQIELDLLRTL-------PNNKHYSCPTSEGIQK-LRNVLLAFSWRNPDI 749
Query: 141 HYYQGYHDIVVTFLLVVGERLAT-SLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQV 199
Y QG + +V LL + + A LV + RD+ T+ ++ ++ +
Sbjct: 750 GYCQGLNRLVAVALLYLEQEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFRDLMSEK 809
Query: 200 NPELHDFMQSAEVG-TIFALSW-LITWFGHVLSDFRHVVRLYDFFLACHPLMPIYFAAVI 257
P LH + +V T+ +W L+ + V+SD + +++D FL P + FA +
Sbjct: 810 LPRLHGHFEQYKVDYTLITFNWFLVVFVDSVVSDI--LFKIWDSFLYEGPKVIFRFALAL 867
Query: 258 VLYREQEVLDCDCDMASVHHL 278
Y+E+E+L M+ +L
Sbjct: 868 FKYKEEEILKLQDSMSIFKYL 888
>gi|139394668 TBC1 domain family, member 9 (with GRAM domain) [Homo
sapiens]
Length = 1266
Score = 47.0 bits (110), Expect = 3e-05
Identities = 69/309 (22%), Positives = 114/309 (36%), Gaps = 28/309 (9%)
Query: 61 LTDEIRRKVWPKL---LNVNANDPPPISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEE 117
+ + +R ++W L +N A P + M K Y ++ R L R P P
Sbjct: 516 IPESMRGELWLLLSGAINEKATHPGYYEDLVEKSMGK-YNLATEEIERDLHRSLPEHPAF 574
Query: 118 QREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLATSLVEKLSTHHLRDF 177
Q E L ++ RNP + Y Q + + LL E A L+ L L D+
Sbjct: 575 QNEMGIAALRRVLTAYAFRNPNIGYCQAMNIVTSVLLLYAKEEEAFWLLVALCERMLPDY 634
Query: 178 MDPTMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTIFALSWLITWFGHVLSDFRHVVR 237
+ + + P+L+D MQ V + +LSW +T F V+ F V
Sbjct: 635 YNTRVVGALVDQGVFEELARDYVPQLYDCMQDLGVISTISLSWFLTLFLSVM-PFESAVV 693
Query: 238 LYDFFLACHPLMPIYFAAVIVLYREQEVLDCDCD----------MASVHHLLSQIPQDLP 287
+ D F + A ++ ++L+C D + SV + S +P P
Sbjct: 694 VVDCFFYEGIKVIFQLALAVLDANVDKLLNCKDDGEAMTVLGRYLDSVTNKDSTLP---P 750
Query: 288 YETLISRAGDLFVQFPPSELAREAAAQQQAERTAASTFKDFELASAQQRPDMVLRQRFRG 347
L S D +P ++ R ++++ F A M +QR +
Sbjct: 751 IPHLHSLLSDDVEPYPEVDIF----------RLIRTSYEKFGTIRADLIEQMRFKQRLKV 800
Query: 348 LLRPEDRTK 356
+ ED TK
Sbjct: 801 IQTLEDTTK 809
>gi|23503283 TBC1 domain family, member 21 [Homo sapiens]
Length = 336
Score = 40.8 bits (94), Expect = 0.002
Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 18/243 (7%)
Query: 60 LLTDEIRRKVWPKLLNVNANDPPPISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQR 119
L D +RRK + L + P + + R ++ + D+++ + P G +
Sbjct: 84 LTVDSMRRKNYKALCQMYEKIQPLLENLH-RNFTETRNNIARDIQKIYDKDPLGNVLIDK 142
Query: 120 EGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLATSLVEKLSTHHLRDFMD 179
+ L++ I+LL N Q Y QG+H++++ F L+V T + +
Sbjct: 143 KRLEK----ILLLSYVCNTQAEYQQGFHEMMMLFQLMVEHDHETFWLFQFFLQKTEHSCV 198
Query: 180 PTMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTIFAL-SWLITWFGHVLSDFRHVVRL 238
+ K+ L+ L +I ++P + ++ G + +L W F F V RL
Sbjct: 199 INIGVAKN-LDMLSTLITFLDPVFAEHLKGKGAGAVQSLFPWFCFCFQRAFKSFDDVWRL 257
Query: 239 YDFFLA---CHPLMPIYFAAVIVLYRE---QEVLDCDCDMASVHHLLSQIPQDLPYETLI 292
++ L C + +++ + RE QE + D + + ++L+ DL + LI
Sbjct: 258 WEVLLTGKPCRNFQVLVAYSMLQMVREQVLQESMGGDDILLACNNLI-----DLDADELI 312
Query: 293 SRA 295
S A
Sbjct: 313 SAA 315
>gi|34147456 TBC domain-containing protein kinase-like [Homo
sapiens]
Length = 830
Score = 40.0 bits (92), Expect = 0.004
Identities = 42/185 (22%), Positives = 78/185 (42%), Gaps = 18/185 (9%)
Query: 137 NPQLHYYQGYHDIVVTFLLVV--GERLATSLVEKLSTHHLRDFMDPTMDNTKHILNYLMP 194
+P L Y+QG + FL + E LA + + +L +F + + H++ +
Sbjct: 476 HPDLVYWQGLDSLCAPFLYLNFNNEALAYACMSAFIPKYLYNFF---LKDNSHVIQEYLT 532
Query: 195 IIDQV----NPELHDFMQSAEVGTI---FALSWLITWFGHVLSDFRHVVRLYDFFLACHP 247
+ Q+ +PEL + + E+G I +A+ W +T F HV + L+D L +
Sbjct: 533 VFSQMIAFHDPELSNHLN--EIGFIPDLYAIPWFLTMFTHVF-PLHKIFHLWDTLLLGNS 589
Query: 248 LMPIYFAAVIVLYREQEVLDCDCDMASVHHLLSQIPQDLPYETLISRAGDLFVQFPPSEL 307
P I+ +L + + L S +P ++ E + + +LF P S
Sbjct: 590 SFPFCIGVAILQQLRDRLLANGFNECIL--LFSDLP-EIDIERCVRESINLFCWTPKSAT 646
Query: 308 AREAA 312
R+ A
Sbjct: 647 YRQHA 651
>gi|40068063 TBC1 domain family, member 22B [Homo sapiens]
Length = 505
Score = 39.3 bits (90), Expect = 0.006
Identities = 50/224 (22%), Positives = 92/224 (41%), Gaps = 33/224 (14%)
Query: 87 KNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGY 146
+N Y+Q+ +D+ R+ P +P Q+ +QE I+ + R+P Y QG
Sbjct: 256 RNEEHHQDTYRQIHIDIPRT----NPLIPLFQQPLVQEIFERILFIWAIRHPASGYVQGI 311
Query: 147 HDIVVTFLLV-----VGERLATSLVEKLSTHHLRDF-------MDPTMDNTKHILNYLMP 194
+D+V F +V V E + V LS LR M +D + + P
Sbjct: 312 NDLVTPFFVVFLSEYVEEDVENFDVTNLSQDMLRSIEADSFWCMSKLLDGIQDNYTFAQP 371
Query: 195 -----------IIDQVNPELHDFMQSAEVGTI-FALSWLITWFGHVLSDFRHVVRLYDFF 242
++ +++ ++H+ + EV + FA W+ L R +RL+D +
Sbjct: 372 GIQKKVKALEELVSRIDEQVHNHFRRYEVEYLQFAFRWMNNLLMREL-PLRCTIRLWDTY 430
Query: 243 LA---CHPLMPIYFAAVIVLYREQEVLDCDCDMASVHHLLSQIP 283
+ +Y A ++ +E+LD + D + LL +P
Sbjct: 431 QSEPEGFSHFHLYVCAAFLIKWRKEILD-EEDFQGLLMLLQNLP 473
>gi|45597177 TBC1 domain family, member 9B (with GRAM domain)
isoform b [Homo sapiens]
Length = 1233
Score = 39.3 bits (90), Expect = 0.006
Identities = 40/173 (23%), Positives = 66/173 (38%), Gaps = 1/173 (0%)
Query: 96 YQQVLLDVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLL 155
Y ++ R L R P P Q E L ++ RNP + Y Q + + LL
Sbjct: 546 YSLATEEIERDLHRSMPEHPAFQNELGIAALRRVLTAYAFRNPTIGYCQAMNIVTSVLLL 605
Query: 156 VVGERLATSLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTI 215
E A L+ L L D+ + + + P+L + MQ V +
Sbjct: 606 YGSEEEAFWLLVALCERMLPDYYNTRVVGALVDQGIFEELTRDFLPQLSEKMQDLGVISS 665
Query: 216 FALSWLITWFGHVLSDFRHVVRLYDFFLACHPLMPIYFAAVIVLYREQEVLDC 268
+LSW +T F V+ F V + D F + + A ++ +++L C
Sbjct: 666 ISLSWFLTLFLSVM-PFESAVVIVDCFFYEGIKVILQVALAVLDANMEQLLGC 717
>gi|45597175 TBC1 domain family, member 9B (with GRAM domain)
isoform a [Homo sapiens]
Length = 1250
Score = 39.3 bits (90), Expect = 0.006
Identities = 40/173 (23%), Positives = 66/173 (38%), Gaps = 1/173 (0%)
Query: 96 YQQVLLDVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLL 155
Y ++ R L R P P Q E L ++ RNP + Y Q + + LL
Sbjct: 546 YSLATEEIERDLHRSMPEHPAFQNELGIAALRRVLTAYAFRNPTIGYCQAMNIVTSVLLL 605
Query: 156 VVGERLATSLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTI 215
E A L+ L L D+ + + + P+L + MQ V +
Sbjct: 606 YGSEEEAFWLLVALCERMLPDYYNTRVVGALVDQGIFEELTRDFLPQLSEKMQDLGVISS 665
Query: 216 FALSWLITWFGHVLSDFRHVVRLYDFFLACHPLMPIYFAAVIVLYREQEVLDC 268
+LSW +T F V+ F V + D F + + A ++ +++L C
Sbjct: 666 ISLSWFLTLFLSVM-PFESAVVIVDCFFYEGIKVILQVALAVLDANMEQLLGC 717
>gi|38570101 TBC1 domain family, member 8B (with GRAM domain)
isoform a [Homo sapiens]
Length = 1120
Score = 38.9 bits (89), Expect = 0.008
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 1/174 (0%)
Query: 102 DVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERL 161
++ R LRR P P Q + L ++ RNP++ Y Q + + LL E
Sbjct: 531 EIERDLRRSLPEHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEE 590
Query: 162 ATSLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTIFALSWL 221
A L+ + L D+ + + +I P+L + M + +LSW
Sbjct: 591 AFWLLVAVCERMLPDYFNRRIIGALVDQAVFEELIRDHLPQLTEHMTDMTFFSSVSLSWF 650
Query: 222 ITWFGHVLSDFRHVVRLYDFFLACHPLMPIYFAAVIVLYREQEVLDCDCDMASV 275
+T F VL V + D F + I+ Y ++L C D +V
Sbjct: 651 LTLFISVL-PIESAVNVVDCFFYDGIKAILQLGLAILDYNLDKLLTCKDDAEAV 703
>gi|156231067 TBC1 domain family, member 8 [Homo sapiens]
Length = 1140
Score = 38.1 bits (87), Expect = 0.014
Identities = 30/124 (24%), Positives = 49/124 (39%)
Query: 102 DVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERL 161
++ R L R P P Q E L ++ RNP++ Y Q + + LL E
Sbjct: 549 EIERDLHRSLPEHPAFQNETGIAALRRVLTAYAHRNPKIGYCQSMNILTSVLLLYTKEEE 608
Query: 162 ATSLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTIFALSWL 221
A L+ + L D+ + + + + +I PEL + M +LSW
Sbjct: 609 AFWLLVAVCERMLPDYFNHRVIGAQVDQSVFEELIKGHLPELAEHMNDLSALASVSLSWF 668
Query: 222 ITWF 225
+T F
Sbjct: 669 LTLF 672
>gi|109638751 ubiquitin specific protease 6 [Homo sapiens]
Length = 1406
Score = 36.6 bits (83), Expect = 0.041
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 17/145 (11%)
Query: 65 IRRKVWPKLLNVNA---NDPP--PISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQR 119
IR VW LLN+ +P I + ++ S+ + LDVR +LR ++
Sbjct: 105 IRGPVWSVLLNIQEIKLKNPGRYQIMKERGKRSSEHIHHIDLDVRTTLRNHV--FFRDRY 162
Query: 120 EGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLA-TSLVEKLST--HHLRD 176
Q EL I+L E NP++ Y + I FLL + E A +LV+ L++ H L
Sbjct: 163 GAKQRELFYILLAYSEYNPEVGYCRDLSHITALFLLYLPEEDAFWALVQLLASERHSLPG 222
Query: 177 FMDPT-------MDNTKHILNYLMP 194
F P D +H++ P
Sbjct: 223 FHSPNGGTVQGLQDQQEHVVPKSQP 247
>gi|226693407 TBC1 domain family, member 3H [Homo sapiens]
Length = 549
Score = 36.2 bits (82), Expect = 0.054
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 65 IRRKVWPKLLNVNA---NDPP--PISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQR 119
IR +W LLN+ +P I + ++ S+ Q++ D+ +LR+ M R
Sbjct: 106 IRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKH---MFFRDR 162
Query: 120 EGL-QEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLA-TSLVEKLST--HHLR 175
G Q EL+ I+L E NP++ Y + I FLL + E A +LV+ L++ H L+
Sbjct: 163 YGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQ 222
Query: 176 DFMDPT-------MDNTKHILNYLMP 194
F P D +H++ P
Sbjct: 223 GFHSPNGGTVQGLQDQQEHVVATSQP 248
>gi|157502205 TBC1 domain family, member 3G [Homo sapiens]
Length = 549
Score = 36.2 bits (82), Expect = 0.054
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 65 IRRKVWPKLLNVNA---NDPP--PISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQR 119
IR +W LLN+ +P I + ++ S+ Q++ D+ +LR+ M R
Sbjct: 106 IRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKH---MFFRDR 162
Query: 120 EGL-QEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLA-TSLVEKLST--HHLR 175
G Q EL+ I+L E NP++ Y + I FLL + E A +LV+ L++ H L+
Sbjct: 163 YGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQ 222
Query: 176 DFMDPT-------MDNTKHILNYLMP 194
F P D +H++ P
Sbjct: 223 GFHSPNGGTVQGLQDQQEHVVATSQP 248
>gi|90577185 TBC1 domain family member 3C [Homo sapiens]
Length = 549
Score = 35.8 bits (81), Expect = 0.071
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 65 IRRKVWPKLLNVNA---NDPP--PISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQR 119
IR +W LLN+ +P I + ++ S+ Q++ D+ +LR+ M R
Sbjct: 106 IRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKH---MFFRDR 162
Query: 120 EGL-QEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLA-TSLVEKLST--HHLR 175
G Q EL+ I+L E NP++ Y + I FLL + E A +LV+ L++ H L+
Sbjct: 163 YGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQ 222
Query: 176 DFMDP 180
F P
Sbjct: 223 GFHSP 227
>gi|183583565 TBC1 domain family, member 3 [Homo sapiens]
Length = 549
Score = 35.0 bits (79), Expect = 0.12
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 65 IRRKVWPKLLNVNA---NDPP--PISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQR 119
IR +W LLN+ +P I + ++ S+ Q++ DV +LR+ + R
Sbjct: 106 IRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKH---IFFRDR 162
Query: 120 EGL-QEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLA-TSLVEKLST--HHLR 175
G Q EL+ I+L E NP++ Y + I FLL + E A +LV+ L++ H L+
Sbjct: 163 YGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQ 222
Query: 176 DFMDPT-------MDNTKHILNYLMP 194
F P D +H++ P
Sbjct: 223 GFHSPNGGTVQGLQDQQEHVVATSQP 248
>gi|183583567 TBC1 domain family, member 3E [Homo sapiens]
Length = 549
Score = 35.0 bits (79), Expect = 0.12
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 65 IRRKVWPKLLNVNA---NDPP--PISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQR 119
IR +W LLN+ +P I + ++ S+ Q++ DV +LR+ + R
Sbjct: 106 IRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKH---IFFRDR 162
Query: 120 EGL-QEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLA-TSLVEKLST--HHLR 175
G Q EL+ I+L E NP++ Y + I FLL + E A +LV+ L++ H L+
Sbjct: 163 YGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQ 222
Query: 176 DFMDPT-------MDNTKHILNYLMP 194
F P D +H++ P
Sbjct: 223 GFHSPNGGTVQGLQDQQEHVVATSQP 248
>gi|149999613 TBC1 domain family, member 3B [Homo sapiens]
Length = 549
Score = 35.0 bits (79), Expect = 0.12
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 65 IRRKVWPKLLNVNA---NDPP--PISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQR 119
IR +W LLN+ +P I + ++ S+ Q++ D+ +LR+ M R
Sbjct: 106 IRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKH---MFFRDR 162
Query: 120 EGL-QEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLA-TSLVEKLST--HHLR 175
G Q EL+ I+L E NP++ Y + I FLL E A +LV+ L++ H L+
Sbjct: 163 YGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYFPEEDAFWALVQLLASERHSLQ 222
Query: 176 DFMDP 180
F P
Sbjct: 223 GFHSP 227
>gi|183583563 TBC1 domain family, member 3D [Homo sapiens]
Length = 549
Score = 35.0 bits (79), Expect = 0.12
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 65 IRRKVWPKLLNVNA---NDPP--PISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQR 119
IR +W LLN+ +P I + ++ S+ Q++ DV +LR+ + R
Sbjct: 106 IRGPMWSVLLNIEEMKLKNPGRYQIMKEKGKRSSEHIQRIDRDVSGTLRKH---IFFRDR 162
Query: 120 EGL-QEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLA-TSLVEKLST--HHLR 175
G Q EL+ I+L E NP++ Y + I FLL + E A +LV+ L++ H L+
Sbjct: 163 YGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQ 222
Query: 176 DFMDPT-------MDNTKHILNYLMP 194
F P D +H++ P
Sbjct: 223 GFHSPNGGTVQGLQDQQEHVVATSQP 248
>gi|167234422 hematopoietic cell-specific Lyn substrate 1 [Homo
sapiens]
Length = 486
Score = 34.7 bits (78), Expect = 0.16
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 21 EKADFNAKRKKKVAEIHQALNSDPTDVAALRRMAISEGGLLTDEIRRKVWPKLLNVNAND 80
EKA A+R+++ + + P V A+ A+ L +I + WP +
Sbjct: 256 EKAQQVARRQQERKAVTKRSPEAPQPVIAMEEPAVPAP--LPKKISSEAWPPV------G 307
Query: 81 PPPISGKNLRQMSKDYQQVLLDVRRSL---RRFPPGMPEEQREGLQEE 125
PP S + S+++ LL +R++L PP +P EGLQ E
Sbjct: 308 TPPSSESEPVRTSREHPVPLLPIRQTLPEDNEEPPALPPRTLEGLQVE 355
>gi|14149985 TBC1 domain family, member 3F [Homo sapiens]
Length = 549
Score = 34.3 bits (77), Expect = 0.21
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 65 IRRKVWPKLLN---VNANDPP--PISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQR 119
IR +W LLN + +P I + ++ S+ Q++ DV +LR+ + R
Sbjct: 106 IRGPMWSVLLNTEEMKLKNPGRYQIMKEKGKKSSEHIQRIDRDVSGTLRKH---IFFRDR 162
Query: 120 EGL-QEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLA-TSLVEKLST--HHLR 175
G Q EL+ I+L E NP++ Y + I FLL + E A +LV+ L++ H L+
Sbjct: 163 YGTKQRELLHILLAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQ 222
Query: 176 DFMDPT-------MDNTKHILNYLMP 194
F P D +H++ P
Sbjct: 223 GFHSPNGGTVQGLQDQQEHVVATSQP 248
>gi|239755792 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 33.9 bits (76), Expect = 0.27
Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 9/122 (7%)
Query: 57 EGGLLTDEIRRKVWPKLLNVNANDPPPIS----GKNLRQMSKDYQQVLLDVRRSLRRFPP 112
EGGLL E+ RK P + + P G++L Q + QVL +R P
Sbjct: 28 EGGLLPPELGRKKTPGDFLAHRHGRVPHQEARLGQHLAQALEQVLQVLQVASPGVRTIPG 87
Query: 113 GMPEEQREGLQEELIDIILLILERNPQLHYYQGYH--DIVVTFLLVVGERLATSLVEKLS 170
+PE G+ ++ + +L L+ G H + V T+ +VVG LA V K
Sbjct: 88 DVPE---AGIHDDQVGGVLARLQLFQDGLEVIGVHAGEEVKTYQMVVGAELADLTVVKAV 144
Query: 171 TH 172
H
Sbjct: 145 VH 146
>gi|239750294 PREDICTED: hypothetical protein XP_002347346 [Homo
sapiens]
Length = 257
Score = 33.9 bits (76), Expect = 0.27
Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 9/122 (7%)
Query: 57 EGGLLTDEIRRKVWPKLLNVNANDPPPIS----GKNLRQMSKDYQQVLLDVRRSLRRFPP 112
EGGLL E+ RK P + + P G++L Q + QVL +R P
Sbjct: 28 EGGLLPPELGRKKTPGDFLAHRHGRVPHQEARLGQHLAQALEQVLQVLQVASPGVRTIPG 87
Query: 113 GMPEEQREGLQEELIDIILLILERNPQLHYYQGYH--DIVVTFLLVVGERLATSLVEKLS 170
+PE G+ ++ + +L L+ G H + V T+ +VVG LA V K
Sbjct: 88 DVPE---AGIHDDQVGGVLARLQLFQDGLEVIGVHAGEEVKTYQMVVGAELADLTVVKAV 144
Query: 171 TH 172
H
Sbjct: 145 VH 146
>gi|239744603 PREDICTED: hypothetical protein XP_002343238 [Homo
sapiens]
Length = 257
Score = 33.9 bits (76), Expect = 0.27
Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 9/122 (7%)
Query: 57 EGGLLTDEIRRKVWPKLLNVNANDPPPIS----GKNLRQMSKDYQQVLLDVRRSLRRFPP 112
EGGLL E+ RK P + + P G++L Q + QVL +R P
Sbjct: 28 EGGLLPPELGRKKTPGDFLAHRHGRVPHQEARLGQHLAQALEQVLQVLQVASPGVRTIPG 87
Query: 113 GMPEEQREGLQEELIDIILLILERNPQLHYYQGYH--DIVVTFLLVVGERLATSLVEKLS 170
+PE G+ ++ + +L L+ G H + V T+ +VVG LA V K
Sbjct: 88 DVPE---AGIHDDQVGGVLARLQLFQDGLEVIGVHAGEEVKTYQMVVGAELADLTVVKAV 144
Query: 171 TH 172
H
Sbjct: 145 VH 146
>gi|197304777 TBC1 domain family, member 5 isoform a [Homo sapiens]
Length = 817
Score = 33.5 bits (75), Expect = 0.35
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 103 VRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVV 157
+ + ++R P M Q+E +++ L D++ N QL Y QG H+++ + V+
Sbjct: 163 IEQDVKRTFPEMQFFQQENVRKILTDVLFCYARENEQLLYKQGMHELLAPIVFVL 217
>gi|197304775 TBC1 domain family, member 5 isoform b [Homo sapiens]
Length = 795
Score = 33.5 bits (75), Expect = 0.35
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 103 VRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVV 157
+ + ++R P M Q+E +++ L D++ N QL Y QG H+++ + V+
Sbjct: 163 IEQDVKRTFPEMQFFQQENVRKILTDVLFCYARENEQLLYKQGMHELLAPIVFVL 217
>gi|7661998 TBC1 domain family, member 5 isoform b [Homo sapiens]
Length = 795
Score = 33.5 bits (75), Expect = 0.35
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 103 VRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVV 157
+ + ++R P M Q+E +++ L D++ N QL Y QG H+++ + V+
Sbjct: 163 IEQDVKRTFPEMQFFQQENVRKILTDVLFCYARENEQLLYKQGMHELLAPIVFVL 217
>gi|148235002 TBC1 domain family, member 26 [Homo sapiens]
Length = 250
Score = 33.1 bits (74), Expect = 0.46
Identities = 31/138 (22%), Positives = 66/138 (47%), Gaps = 9/138 (6%)
Query: 28 KRKKKVAEIHQALNSDPTDVAALRRMAISEGGLLTDEIRRKVWPKLLNVNA-NDPPPISG 86
+++ K Q + +D T + ++++ ++ +R + W LL+++ P
Sbjct: 69 RKESKRTNKWQKMLADWTKYRSTKKLSQRVYKVIPLAVRGRAWSLLLDIDRIKSQNPGKY 128
Query: 87 KNLRQMSKDYQQVL----LDVRRSLRRFPPGMPEEQREGL-QEELIDIILLILERNPQLH 141
K +++ K +++ LDV +L++ M QR G+ Q+EL DI++ NP++
Sbjct: 129 KVMKEKGKRSSRIIHCIQLDVSHTLQKH---MMFIQRFGVKQQELCDILVAYSAYNPEVG 185
Query: 142 YYQGYHDIVVTFLLVVGE 159
Y++ I LL + E
Sbjct: 186 YHRDLSRITAILLLCLPE 203
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 30.8 bits (68), Expect = 2.3
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 22 KADFNAKRKKKVAEIHQALNSDPTDVAALRR----------------MAISEGGLLTDEI 65
KA F+ +++++ +E+H L D L++ + E DE+
Sbjct: 757 KAQFSEEKEQENSELHAKLKHLQDDNNLLKQQLKDFQNHLNHVVDGLVRPEEVAARVDEL 816
Query: 66 RRKVWPKLLNVNANDPPPISGKNLRQMSKDYQQVL 100
RRK+ +N + P + GK+L + K + ++L
Sbjct: 817 RRKLKLGTGEMNIHSPSDVLGKSLADLQKQFSEIL 851
>gi|14150045 calcium/calmodulin-dependent protein kinase 1 alpha
isoform a [Homo sapiens]
Length = 505
Score = 30.4 bits (67), Expect = 3.0
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 100 LLDVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQ 139
+L + R ++ P PEE + EEL D+IL +L++NP+
Sbjct: 358 ILALHRKIKNEPVVFPEEPE--ISEELKDLILKMLDKNPE 395
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,106,624
Number of Sequences: 37866
Number of extensions: 649921
Number of successful extensions: 1685
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1674
Number of HSP's gapped (non-prelim): 42
length of query: 403
length of database: 18,247,518
effective HSP length: 105
effective length of query: 298
effective length of database: 14,271,588
effective search space: 4252933224
effective search space used: 4252933224
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.