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Search of human proteins with 21361792
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21361792 sperm associated antigen 4-like [Homo sapiens]
(379 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21361792 sperm associated antigen 4-like [Homo sapiens] 790 0.0
gi|11037055 sperm associated antigen 4 [Homo sapiens] 223 2e-58
gi|71834870 Sad1 and UNC84 domain containing 1 [Homo sapiens] 162 4e-40
gi|71834868 Sad1 and UNC84 domain containing 1 [Homo sapiens] 162 4e-40
gi|195972890 unc-84 homolog A isoform a [Homo sapiens] 150 2e-36
gi|110227866 unc-84 homolog A isoform b [Homo sapiens] 150 2e-36
gi|31742498 unc-84 homolog B [Homo sapiens] 140 1e-33
gi|170784831 chromosome 1 open reading frame 9 protein isoform 2... 38 0.013
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 37 0.029
gi|55770834 centromere protein F [Homo sapiens] 36 0.050
gi|7656940 chromosome 1 open reading frame 9 protein isoform 1 [... 36 0.065
gi|7705415 hook homolog 1 [Homo sapiens] 33 0.42
gi|103471995 serum response factor binding protein 1 [Homo sapiens] 33 0.55
gi|10864047 epidermal growth factor receptor pathway substrate 1... 31 1.6
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 30 2.7
gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens] 30 2.7
gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens] 30 2.7
gi|30260188 Golgi autoantigen, golgin subfamily a, 5 [Homo sapiens] 30 2.7
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 30 3.6
gi|224451128 eyes shut homolog isoform 1 [Homo sapiens] 30 4.7
gi|229577185 epidermal growth factor receptor pathway substrate ... 29 8.0
>gi|21361792 sperm associated antigen 4-like [Homo sapiens]
Length = 379
Score = 790 bits (2039), Expect = 0.0
Identities = 379/379 (100%), Positives = 379/379 (100%)
Query: 1 MPRSSRSPGDPGALLEDVAHNPRPRRIAQRGRNTSRMAEDTSPNMNDNILLPVRNNDQAL 60
MPRSSRSPGDPGALLEDVAHNPRPRRIAQRGRNTSRMAEDTSPNMNDNILLPVRNNDQAL
Sbjct: 1 MPRSSRSPGDPGALLEDVAHNPRPRRIAQRGRNTSRMAEDTSPNMNDNILLPVRNNDQAL 60
Query: 61 GLTQCMLGCVSWFTCFACSLRTQAQQVLFNTCRCKLLCQKLMEKTGILLLCAFGFWMFSI 120
GLTQCMLGCVSWFTCFACSLRTQAQQVLFNTCRCKLLCQKLMEKTGILLLCAFGFWMFSI
Sbjct: 61 GLTQCMLGCVSWFTCFACSLRTQAQQVLFNTCRCKLLCQKLMEKTGILLLCAFGFWMFSI 120
Query: 121 HLPSKMKVWQDDSINGPLQSLRLYQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDEQK 180
HLPSKMKVWQDDSINGPLQSLRLYQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDEQK
Sbjct: 121 HLPSKMKVWQDDSINGPLQSLRLYQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDEQK 180
Query: 181 MAQKIMKMIHGDYIEKPDFALKSIGASIDFEHTSVTYNHEKAHSYWNWIQLWNYAQPPDV 240
MAQKIMKMIHGDYIEKPDFALKSIGASIDFEHTSVTYNHEKAHSYWNWIQLWNYAQPPDV
Sbjct: 181 MAQKIMKMIHGDYIEKPDFALKSIGASIDFEHTSVTYNHEKAHSYWNWIQLWNYAQPPDV 240
Query: 241 ILEPNVTPGNCWAFEGDRGQVTIQLAQKVYLSNLTLQHIPKTISLSGSLDTAPKDFVIYG 300
ILEPNVTPGNCWAFEGDRGQVTIQLAQKVYLSNLTLQHIPKTISLSGSLDTAPKDFVIYG
Sbjct: 241 ILEPNVTPGNCWAFEGDRGQVTIQLAQKVYLSNLTLQHIPKTISLSGSLDTAPKDFVIYG 300
Query: 301 MEGSPKEEVFLGAFQFQPENIIQMFPLQNQPARAFSAVKVKISSNWGNPGFTCLYRVRVH 360
MEGSPKEEVFLGAFQFQPENIIQMFPLQNQPARAFSAVKVKISSNWGNPGFTCLYRVRVH
Sbjct: 301 MEGSPKEEVFLGAFQFQPENIIQMFPLQNQPARAFSAVKVKISSNWGNPGFTCLYRVRVH 360
Query: 361 GSVAPPREQPHQNPYPKRD 379
GSVAPPREQPHQNPYPKRD
Sbjct: 361 GSVAPPREQPHQNPYPKRD 379
>gi|11037055 sperm associated antigen 4 [Homo sapiens]
Length = 437
Score = 223 bits (569), Expect = 2e-58
Identities = 119/285 (41%), Positives = 174/285 (61%), Gaps = 11/285 (3%)
Query: 80 LRTQAQQVLFNTCRCKLLCQKLMEKTGILLLCAFGFWMFSIHLPSKMKVWQDDSINGPLQ 139
L + A VL + R + L +L L FW+ ++L S ++ N P +
Sbjct: 146 LLSLAGDVLVSMYREVCSIRFLFTAVSLLSLFLSAFWLGLLYLVSPLE-------NEPKE 198
Query: 140 SLRL--YQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDEQKMAQKIMKMIHGDYIEKP 197
L L Y E+VR ++Q L+ +++L ++ + A + E ++A+ + + ++ D++ KP
Sbjct: 199 MLTLSEYHERVRSQGQQLQQLQAELDKLHKEVSTVRAANSE-RVAKLVFQRLNEDFVRKP 257
Query: 198 DFALKSIGASIDFEHTSVTYNHEKAHSYWNWIQLWNYAQPPDVILEPNVTPGNCWAFEGD 257
D+AL S+GASID + TS Y +WN WNYA+PP VILEP+V PGNCWAFEGD
Sbjct: 258 DYALSSVGASIDLQKTSHDYADRNTAYFWNRFSFWNYARPPTVILEPHVFPGNCWAFEGD 317
Query: 258 RGQVTIQLAQKVYLSNLTLQHIPKTISLSGSLDTAPKDFVIYGMEGSPKEEVFLGAFQFQ 317
+GQV IQL +V LS++TLQH P ++ +G ++AP+DF ++G++ + EV LG F F
Sbjct: 318 QGQVVIQLPGRVQLSDITLQHPPPSVEHTGGANSAPRDFAVFGLQVYDETEVSLGKFTFD 377
Query: 318 PE-NIIQMFPLQNQPARAFSAVKVKISSNWGNPGFTCLYRVRVHG 361
E + IQ F LQN P AF VK++I SNWG+P FTCLYRVR HG
Sbjct: 378 VEKSEIQTFHLQNDPPAAFPKVKIQILSNWGHPRFTCLYRVRAHG 422
>gi|71834870 Sad1 and UNC84 domain containing 1 [Homo sapiens]
Length = 357
Score = 162 bits (411), Expect = 4e-40
Identities = 79/196 (40%), Positives = 123/196 (62%), Gaps = 2/196 (1%)
Query: 169 LQEMEAMSDEQKMAQKIMKMIHGDYIEKPDFALKSIGASIDFEHTSVTYNHEKAHSYWNW 228
+++ + + + ++K + D +E D+ALKS GASI TS +Y + KA YW+
Sbjct: 157 VEDPDHTEEVSNLVNYVLKKLREDQVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHG 216
Query: 229 IQLWNYAQPPDVILEPNVTPGNCWAFEGDRGQVTIQLAQKVYLSNLTLQHIPKTISLSGS 288
I N+ PPD+IL+P+V PG CWAF G +G I+LA K+ + +T++HI + +S SG+
Sbjct: 217 IGFLNHEMPPDIILQPDVYPGKCWAFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGN 276
Query: 289 LDTAPKDFVIYGM-EGSPKEEVFLGAFQF-QPENIIQMFPLQNQPARAFSAVKVKISSNW 346
+ +APK+F +YG+ + EE+FLG F + + +Q F LQ+ + VK+ I SNW
Sbjct: 277 ISSAPKEFSVYGITKKCEGEEIFLGQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNW 336
Query: 347 GNPGFTCLYRVRVHGS 362
G+P +TCLYR RVHG+
Sbjct: 337 GHPKYTCLYRFRVHGT 352
>gi|71834868 Sad1 and UNC84 domain containing 1 [Homo sapiens]
Length = 357
Score = 162 bits (411), Expect = 4e-40
Identities = 79/196 (40%), Positives = 123/196 (62%), Gaps = 2/196 (1%)
Query: 169 LQEMEAMSDEQKMAQKIMKMIHGDYIEKPDFALKSIGASIDFEHTSVTYNHEKAHSYWNW 228
+++ + + + ++K + D +E D+ALKS GASI TS +Y + KA YW+
Sbjct: 157 VEDPDHTEEVSNLVNYVLKKLREDQVEMADYALKSAGASIIEAGTSESYKNNKAKLYWHG 216
Query: 229 IQLWNYAQPPDVILEPNVTPGNCWAFEGDRGQVTIQLAQKVYLSNLTLQHIPKTISLSGS 288
I N+ PPD+IL+P+V PG CWAF G +G I+LA K+ + +T++HI + +S SG+
Sbjct: 217 IGFLNHEMPPDIILQPDVYPGKCWAFPGSQGHTLIKLATKIIPTAVTMEHISEKVSPSGN 276
Query: 289 LDTAPKDFVIYGM-EGSPKEEVFLGAFQF-QPENIIQMFPLQNQPARAFSAVKVKISSNW 346
+ +APK+F +YG+ + EE+FLG F + + +Q F LQ+ + VK+ I SNW
Sbjct: 277 ISSAPKEFSVYGITKKCEGEEIFLGQFIYNKTGTTVQTFELQHAVSEYLLCVKLNIFSNW 336
Query: 347 GNPGFTCLYRVRVHGS 362
G+P +TCLYR RVHG+
Sbjct: 337 GHPKYTCLYRFRVHGT 352
>gi|195972890 unc-84 homolog A isoform a [Homo sapiens]
Length = 785
Score = 150 bits (379), Expect = 2e-36
Identities = 89/231 (38%), Positives = 133/231 (57%), Gaps = 12/231 (5%)
Query: 138 LQSLRLYQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDEQKMAQKI----MKMIHGDY 193
LQ LR V HH + L S +++ + E A + A+ I +K+ D
Sbjct: 556 LQILR----NVTHHVSVTKQLPTS-EAVVSAVSEAGASGITEAQARAIVNSALKLYSQDK 610
Query: 194 IEKPDFALKSIGASIDFEHTSVTYNHEKAHSYWNWIQLWNYAQPPDVILEPNVTPGNCWA 253
DFAL+S G SI S TY + A I LW ++Q P V+++P++ PGNCWA
Sbjct: 611 TGMVDFALESGGGSILSTRCSETYETKTALMSLFGIPLWYFSQSPRVVIQPDIYPGNCWA 670
Query: 254 FEGDRGQVTIQLAQKVYLSNLTLQHIPKTISLSGSLDTAPKDFVIYGMEGSPKEE-VFLG 312
F+G +G + ++L+ ++ + TL+HIPKT+S +G++ +APKDF +YG+E +EE LG
Sbjct: 671 FKGSQGYLVVRLSMMIHPAAFTLEHIPKTLSPTGNISSAPKDFAVYGLENEYQEEGQLLG 730
Query: 313 AFQF-QPENIIQMFPLQNQP-ARAFSAVKVKISSNWGNPGFTCLYRVRVHG 361
F + Q +QMF +P AF V+++I SNWG+P +TCLYR RVHG
Sbjct: 731 QFTYDQDGESLQMFQALKRPDDTAFQIVELRIFSNWGHPEYTCLYRFRVHG 781
>gi|110227866 unc-84 homolog A isoform b [Homo sapiens]
Length = 702
Score = 150 bits (379), Expect = 2e-36
Identities = 89/231 (38%), Positives = 133/231 (57%), Gaps = 12/231 (5%)
Query: 138 LQSLRLYQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDEQKMAQKI----MKMIHGDY 193
LQ LR V HH + L S +++ + E A + A+ I +K+ D
Sbjct: 473 LQILR----NVTHHVSVTKQLPTS-EAVVSAVSEAGASGITEAQARAIVNSALKLYSQDK 527
Query: 194 IEKPDFALKSIGASIDFEHTSVTYNHEKAHSYWNWIQLWNYAQPPDVILEPNVTPGNCWA 253
DFAL+S G SI S TY + A I LW ++Q P V+++P++ PGNCWA
Sbjct: 528 TGMVDFALESGGGSILSTRCSETYETKTALMSLFGIPLWYFSQSPRVVIQPDIYPGNCWA 587
Query: 254 FEGDRGQVTIQLAQKVYLSNLTLQHIPKTISLSGSLDTAPKDFVIYGMEGSPKEE-VFLG 312
F+G +G + ++L+ ++ + TL+HIPKT+S +G++ +APKDF +YG+E +EE LG
Sbjct: 588 FKGSQGYLVVRLSMMIHPAAFTLEHIPKTLSPTGNISSAPKDFAVYGLENEYQEEGQLLG 647
Query: 313 AFQF-QPENIIQMFPLQNQP-ARAFSAVKVKISSNWGNPGFTCLYRVRVHG 361
F + Q +QMF +P AF V+++I SNWG+P +TCLYR RVHG
Sbjct: 648 QFTYDQDGESLQMFQALKRPDDTAFQIVELRIFSNWGHPEYTCLYRFRVHG 698
>gi|31742498 unc-84 homolog B [Homo sapiens]
Length = 717
Score = 140 bits (354), Expect = 1e-33
Identities = 83/232 (35%), Positives = 127/232 (54%), Gaps = 8/232 (3%)
Query: 141 LRLYQEKVRHHSGEIQ--DLRGSMNQLIAKLQEMEAMSDEQKMAQKIMKMIHGDYIEK-- 196
LR + K+ H E+Q R + L LQ+ + ++ I+K Y E
Sbjct: 485 LRELESKILTHVAEMQGKSAREAAASLSLTLQKEGVIGVTEEQVHHIVKQALQRYSEDRI 544
Query: 197 --PDFALKSIGASIDFEHTSVTYNHEKAHSYWNWIQLWNYAQPPDVILEPNVTPGNCWAF 254
D+AL+S GAS+ S TY + A I LW ++Q P VIL+P+V PGNCWAF
Sbjct: 545 GLADYALESGGASVISTRCSETYETKTALLSLFGIPLWYHSQSPRVILQPDVHPGNCWAF 604
Query: 255 EGDRGQVTIQLAQKVYLSNLTLQHIPKTISLSGSLDTAPKDFVIYGM-EGSPKEEVFLGA 313
+G +G ++L+ ++ + +TL+H+PK +S + ++ +APKDF I+G E +E LG
Sbjct: 605 QGPQGFAVVRLSARIRPTAVTLEHVPKALSPNSTISSAPKDFAIFGFDEDLQQEGTLLGK 664
Query: 314 FQF-QPENIIQMFPLQNQPARAFSAVKVKISSNWGNPGFTCLYRVRVHGSVA 364
F + Q IQ F Q + V+++I +NWG+P +TC+YR RVHG A
Sbjct: 665 FTYDQDGEPIQTFHFQAPTMATYQVVELRILTNWGHPEYTCIYRFRVHGEPA 716
>gi|170784831 chromosome 1 open reading frame 9 protein isoform 2
[Homo sapiens]
Length = 1210
Score = 38.1 bits (87), Expect = 0.013
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 291 TAPKDFVIYGMEGSPKEE-VFLGAFQFQPENIIQMFPLQNQPARAFSAVKVKISSNWGNP 349
+ PKDF++ + P + + LG F + E +Q FPL Q + VKV++ S++G+
Sbjct: 337 STPKDFLVSISDRYPTNKWIKLGTFHGRDERNVQSFPLDEQMYAKY--VKVELLSHFGSE 394
Query: 350 GFTCLYRVRVHGS 362
F L +RV G+
Sbjct: 395 HFCPLSLIRVFGT 407
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 37.0 bits (84), Expect = 0.029
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 145 QEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDEQKMAQKIMKMIHGDYIEKPDFALKSI 204
+E+++HH I+D S QL+ LQE + DE + + M H + D +KS+
Sbjct: 909 EEEIKHHQKIIEDQNQSKMQLLQSLQEQKKEMDEFRYQHEQMNATHTQLFLEKDEEIKSL 968
Query: 205 GASID 209
+I+
Sbjct: 969 QKTIE 973
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 36.2 bits (82), Expect = 0.050
Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 139 QSLRLYQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDEQKMAQKIMKMIHG------D 192
+ L+L +KV EIQ+L+ S + L L+E++ +S+ + +K M I +
Sbjct: 911 KELQLLNDKVETEQAEIQELKKSNHLLEDSLKELQLLSETLSLEKKEMSSIISLNKREIE 970
Query: 193 YIEKPDFALKSIGASIDFEHTSVTYNHEKAHSYWNWI 229
+ + + LK I AS++ E ++ +K+ S+ N+I
Sbjct: 971 ELTQENGTLKEINASLNQEKMNLI---QKSESFANYI 1004
>gi|7656940 chromosome 1 open reading frame 9 protein isoform 1
[Homo sapiens]
Length = 1254
Score = 35.8 bits (81), Expect = 0.065
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 291 TAPKDFVIYGMEGSPKEE-VFLGAFQFQPENIIQMFPLQNQPARAF-----SAVKVKISS 344
+ PKDF++ + P + + LG F + E +Q FPL Q + +KV++ S
Sbjct: 374 STPKDFLVSISDRYPTNKWIKLGTFHGRDERNVQSFPLDEQMYAKYVKMFIKYIKVELLS 433
Query: 345 NWGNPGFTCLYRVRVHGS 362
++G+ F L +RV G+
Sbjct: 434 HFGSEHFCPLSLIRVFGT 451
>gi|7705415 hook homolog 1 [Homo sapiens]
Length = 728
Score = 33.1 bits (74), Expect = 0.42
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 124 SKMKVWQDDSINGPLQSLRLYQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDEQKMAQ 183
SK+K + ++ L E+++ I+DL+ +NQ + K+ E+EA ++
Sbjct: 544 SKLK----QKLEAHMEKLTEVHEELQKKQELIEDLQPDINQNVQKINELEAALQKKDEDM 599
Query: 184 KIMKMIHGDYIEKPDFALKSIGASID 209
K M+ + Y+EK +K++ ++
Sbjct: 600 KAMEERYKMYLEKARNVIKTLDPKLN 625
>gi|103471995 serum response factor binding protein 1 [Homo sapiens]
Length = 429
Score = 32.7 bits (73), Expect = 0.55
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 130 QDDSINGPLQSLRLYQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDEQKMAQKIMKMI 189
Q ++N + +++ +E R I+ L S+ +L +K +A+ Q+ AQ++++ I
Sbjct: 3 QPGTLNLNNEVVKMRKEVKRIRVLVIRKLVRSVGRLKSKKGTEDALLKNQRRAQRLLEEI 62
Query: 190 HGDYIEKPDFALKS-IGASIDFE 211
H KPD KS +G I+FE
Sbjct: 63 HAMKELKPDIVTKSALGDDINFE 85
>gi|10864047 epidermal growth factor receptor pathway substrate
15-like 1 [Homo sapiens]
Length = 864
Score = 31.2 bits (69), Expect = 1.6
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 139 QSLRLYQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDE 178
Q +R +E +R + E+Q+L+ +++ + LQE+EA +
Sbjct: 405 QDIREKEEAIRQKTSEVQELQNDLDRETSSLQELEAQKQD 444
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 30.4 bits (67), Expect = 2.7
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 127 KVW-QDDSINGPLQSLRLYQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAM-SDEQKMAQK 184
K+W Q++ I + +R +EK+R +Q+ M + K+QE E M E+K+ ++
Sbjct: 517 KMWRQEEKIREQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMQEQEKMRRQEEKIREQ 576
Query: 185 IMKM 188
K+
Sbjct: 577 EEKI 580
Score = 30.0 bits (66), Expect = 3.6
Identities = 21/98 (21%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 127 KVW-QDDSINGPLQSLRLYQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDEQ--KMAQ 183
KVW Q++ ++ + +R +EK+ +I++ + + K++E E M EQ KM +
Sbjct: 496 KVWRQEEKMHDQEEKIREQEEKMWRQEEKIREQEEKIREQEEKIREQEEMMQEQEEKMGE 555
Query: 184 KIMKMIHGDYIEKPDFALKSIGASIDFEHTSVTYNHEK 221
+ KM + + + + ++ I + + EK
Sbjct: 556 QEEKMQEQEKMRRQEEKIREQEEKIREQKEKIREQEEK 593
>gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens]
Length = 634
Score = 30.4 bits (67), Expect = 2.7
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 125 KMKVWQDDSINGPLQSLRLYQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDEQKMAQK 184
K+ W D Q ++KV+ S I N ++A+ +EM + ++ K +
Sbjct: 522 KLLKWSSDL----KQEREQLEQKVKQLSNSISKCMEMKNTILARQKEMHSSLEKVK---Q 574
Query: 185 IMKMIHGDYIEKPDFALKSIGA 206
++++IHG + KP + ++GA
Sbjct: 575 LIRLIHGIDLSKPVDSEATVGA 596
>gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens]
Length = 680
Score = 30.4 bits (67), Expect = 2.7
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 125 KMKVWQDDSINGPLQSLRLYQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDEQKMAQK 184
K+ W D Q ++KV+ S I N ++A+ +EM + ++ K +
Sbjct: 568 KLLKWSSDL----KQEREQLEQKVKQLSNSISKCMEMKNTILARQKEMHSSLEKVK---Q 620
Query: 185 IMKMIHGDYIEKPDFALKSIGA 206
++++IHG + KP + ++GA
Sbjct: 621 LIRLIHGIDLSKPVDSEATVGA 642
>gi|30260188 Golgi autoantigen, golgin subfamily a, 5 [Homo sapiens]
Length = 731
Score = 30.4 bits (67), Expect = 2.7
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 138 LQSLRLYQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMS-DEQKMAQKIMKMIH 190
L+ LR +E R EIQ L G ++QL ++LQ+MEA +E + A++ ++ +H
Sbjct: 468 LEELRHEKEMQRE---EIQKLMGQIHQLRSELQDMEAQQVNEAESAREQLQDLH 518
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 30.0 bits (66), Expect = 3.6
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 127 KVW-QDDSINGPLQSLRLYQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMSDEQ--KMAQ 183
K+W Q++ ++ + +R +EKV +I++ + + K++E E M+ EQ KM +
Sbjct: 558 KMWRQEEKMHDQEEKIREQEEKVWRQEEKIREQEEKIREQEEKIREQEEMTQEQEEKMGE 617
Query: 184 KIMKM 188
+ KM
Sbjct: 618 QEEKM 622
>gi|224451128 eyes shut homolog isoform 1 [Homo sapiens]
Length = 3144
Score = 29.6 bits (65), Expect = 4.7
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 12/106 (11%)
Query: 267 QKVYLSNLTLQHIPKTISLSGSL-----DTAPKDFV-IYGMEGSPKEEVFLGAFQFQPEN 320
+K + +T+ KT SL+G++ + K F+ ++ +EG P + G Q N
Sbjct: 2166 EKEHNRTVTIYLTIKTNSLNGTILYSNGNNCGKQFLHLFLVEGRPSVKYGCGNSQ----N 2221
Query: 321 IIQMFPLQNQPARAFSAVKVKISSNWGNPGFTCLYRVRVHGSVAPP 366
I+ + + AF+ + ++ ++ G+PG C+ + G PP
Sbjct: 2222 ILTVSANYSINTNAFTPITIRYTTPVGSPGVVCMIEMTADGK--PP 2265
>gi|229577185 epidermal growth factor receptor pathway substrate 15
isoform B [Homo sapiens]
Length = 582
Score = 28.9 bits (63), Expect = 8.0
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 13/106 (12%)
Query: 129 WQDDSINGPLQSLRLYQEKVRHHSGEIQDLRGSMNQLIAKLQEMEAMS----------DE 178
W N Q L+ ++ ++ + E+QDL+ + + LQ+++A DE
Sbjct: 30 WSSREKNNVEQDLKEKEDTIKQRTSEVQDLQDEVQRENTNLQKLQAQKQQVQELLDELDE 89
Query: 179 QK-MAQKIMKMIHGDYIEKPDFALKSIGASIDFEHTSV-TYNHEKA 222
QK ++ +K + E+ + S+ A + + + + TY E A
Sbjct: 90 QKAQLEEQLKEVRKKCAEEAQL-ISSLKAELTSQESQISTYEEELA 134
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,227,563
Number of Sequences: 37866
Number of extensions: 734938
Number of successful extensions: 2025
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1975
Number of HSP's gapped (non-prelim): 47
length of query: 379
length of database: 18,247,518
effective HSP length: 104
effective length of query: 275
effective length of database: 14,309,454
effective search space: 3935099850
effective search space used: 3935099850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.