Guide to the Human Genome
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Search of human proteins with 113429320

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|113429320 PREDICTED: hypothetical protein [Homo sapiens]
         (69 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|113429320 PREDICTED: hypothetical protein [Homo sapiens]           140   3e-34
gi|113429310 PREDICTED: hypothetical protein [Homo sapiens]           140   3e-34
gi|113429273 PREDICTED: hypothetical protein [Homo sapiens]           140   3e-34
gi|113429264 PREDICTED: hypothetical protein [Homo sapiens]           140   3e-34
gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens]           88   1e-18
gi|153266907 gamma-glutamyltransferase 5 isoform c [Homo sapiens]      54   3e-08
gi|153266901 gamma-glutamyltransferase 5 isoform a [Homo sapiens]      54   3e-08
gi|153266885 gamma-glutamyltransferase 5 isoform b [Homo sapiens]      54   3e-08
gi|116256487 patatin-like phospholipase domain containing 6 [Hom...    30   0.41 
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap...    27   2.7  
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap...    27   2.7  
gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens]         27   3.5  
gi|10181096 adenylate cyclase 6 isoform a [Homo sapiens]               27   4.5  
gi|10947061 adenylate cyclase 6 isoform b [Homo sapiens]               27   4.5  
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho...    27   4.5  
gi|110735443 delta-like 1 [Homo sapiens]                               26   5.9  
gi|19913375 G6B protein isoform G6b-B precursor [Homo sapiens]         26   5.9  
gi|117938768 GNAS complex locus alex [Homo sapiens]                    26   7.7  
gi|19913385 G6B protein isoform G6b-G precursor [Homo sapiens]         26   7.7  
gi|19913373 G6B protein isoform G6b-A precursor [Homo sapiens]         26   7.7  
gi|61175227 ribonuclease, RNase A family, 10 (non-active) [Homo ...    26   7.7  

>gi|113429320 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 69

 Score =  140 bits (352), Expect = 3e-34
 Identities = 69/69 (100%), Positives = 69/69 (100%)

Query: 1  MAQDYGAMGDLVLLGLGLGLALAVIVLAVVLSRHQAPFDPRPLPTPLLLLTPRSSQILYG 60
          MAQDYGAMGDLVLLGLGLGLALAVIVLAVVLSRHQAPFDPRPLPTPLLLLTPRSSQILYG
Sbjct: 1  MAQDYGAMGDLVLLGLGLGLALAVIVLAVVLSRHQAPFDPRPLPTPLLLLTPRSSQILYG 60

Query: 61 RKLHIFWFT 69
          RKLHIFWFT
Sbjct: 61 RKLHIFWFT 69


>gi|113429310 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 69

 Score =  140 bits (352), Expect = 3e-34
 Identities = 69/69 (100%), Positives = 69/69 (100%)

Query: 1  MAQDYGAMGDLVLLGLGLGLALAVIVLAVVLSRHQAPFDPRPLPTPLLLLTPRSSQILYG 60
          MAQDYGAMGDLVLLGLGLGLALAVIVLAVVLSRHQAPFDPRPLPTPLLLLTPRSSQILYG
Sbjct: 1  MAQDYGAMGDLVLLGLGLGLALAVIVLAVVLSRHQAPFDPRPLPTPLLLLTPRSSQILYG 60

Query: 61 RKLHIFWFT 69
          RKLHIFWFT
Sbjct: 61 RKLHIFWFT 69


>gi|113429273 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 69

 Score =  140 bits (352), Expect = 3e-34
 Identities = 69/69 (100%), Positives = 69/69 (100%)

Query: 1  MAQDYGAMGDLVLLGLGLGLALAVIVLAVVLSRHQAPFDPRPLPTPLLLLTPRSSQILYG 60
          MAQDYGAMGDLVLLGLGLGLALAVIVLAVVLSRHQAPFDPRPLPTPLLLLTPRSSQILYG
Sbjct: 1  MAQDYGAMGDLVLLGLGLGLALAVIVLAVVLSRHQAPFDPRPLPTPLLLLTPRSSQILYG 60

Query: 61 RKLHIFWFT 69
          RKLHIFWFT
Sbjct: 61 RKLHIFWFT 69


>gi|113429264 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 69

 Score =  140 bits (352), Expect = 3e-34
 Identities = 69/69 (100%), Positives = 69/69 (100%)

Query: 1  MAQDYGAMGDLVLLGLGLGLALAVIVLAVVLSRHQAPFDPRPLPTPLLLLTPRSSQILYG 60
          MAQDYGAMGDLVLLGLGLGLALAVIVLAVVLSRHQAPFDPRPLPTPLLLLTPRSSQILYG
Sbjct: 1  MAQDYGAMGDLVLLGLGLGLALAVIVLAVVLSRHQAPFDPRPLPTPLLLLTPRSSQILYG 60

Query: 61 RKLHIFWFT 69
          RKLHIFWFT
Sbjct: 61 RKLHIFWFT 69


>gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens]
          Length = 645

 Score = 88.2 bits (217), Expect = 1e-18
 Identities = 49/57 (85%), Positives = 51/57 (89%), Gaps = 2/57 (3%)

Query: 2   AQDYGAMGDLVLLGLGLGLALAVIVLAVVLSRHQAPFDPRPLPTPLLLLTPRSSQIL 58
           AQD  AM  LVLLGLGL  ALAVIVLAVVLSRHQAPFDPRPLPTPLLLLTPRS++IL
Sbjct: 162 AQDCRAMVGLVLLGLGL--ALAVIVLAVVLSRHQAPFDPRPLPTPLLLLTPRSARIL 216


>gi|153266907 gamma-glutamyltransferase 5 isoform c [Homo sapiens]
          Length = 554

 Score = 53.5 bits (127), Expect = 3e-08
 Identities = 31/41 (75%), Positives = 33/41 (80%), Gaps = 2/41 (4%)

Query: 1  MAQDYGAMGDLVLLGLGLGLALAVIVLAVVLSRHQAPFDPR 41
          MA+ YGA   LVLLGLGL  ALAVIVLAVVLSRHQAP  P+
Sbjct: 1  MARGYGATVSLVLLGLGL--ALAVIVLAVVLSRHQAPCGPQ 39


>gi|153266901 gamma-glutamyltransferase 5 isoform a [Homo sapiens]
          Length = 587

 Score = 53.5 bits (127), Expect = 3e-08
 Identities = 31/41 (75%), Positives = 33/41 (80%), Gaps = 2/41 (4%)

Query: 1  MAQDYGAMGDLVLLGLGLGLALAVIVLAVVLSRHQAPFDPR 41
          MA+ YGA   LVLLGLGL  ALAVIVLAVVLSRHQAP  P+
Sbjct: 1  MARGYGATVSLVLLGLGL--ALAVIVLAVVLSRHQAPCGPQ 39


>gi|153266885 gamma-glutamyltransferase 5 isoform b [Homo sapiens]
          Length = 586

 Score = 53.5 bits (127), Expect = 3e-08
 Identities = 31/41 (75%), Positives = 33/41 (80%), Gaps = 2/41 (4%)

Query: 1  MAQDYGAMGDLVLLGLGLGLALAVIVLAVVLSRHQAPFDPR 41
          MA+ YGA   LVLLGLGL  ALAVIVLAVVLSRHQAP  P+
Sbjct: 1  MARGYGATVSLVLLGLGL--ALAVIVLAVVLSRHQAPCGPQ 39


>gi|116256487 patatin-like phospholipase domain containing 6 [Homo
          sapiens]
          Length = 1327

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 12 VLLGLGLGLALAVIVLAVVLSRHQAPFDPRPLPTPLLLLTPRSSQILYGRKL 63
          V++G G+ + +  +++ +V+ R + P  P P   P      R   + YGRK+
Sbjct: 13 VMIGAGVAVVVTAVLILLVVRRLRVPKTPAP-DGPRYRFRKRDKVLFYGRKI 63


>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
           sapiens]
          Length = 1038

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 12/22 (54%), Positives = 14/22 (63%)

Query: 31  LSRHQAPFDPRPLPTPLLLLTP 52
           L   Q+P +P PLP PLLL  P
Sbjct: 876 LREAQSPEEPTPLPVPLLLPPP 897


>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
           sapiens]
          Length = 1086

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 12/22 (54%), Positives = 14/22 (63%)

Query: 31  LSRHQAPFDPRPLPTPLLLLTP 52
           L   Q+P +P PLP PLLL  P
Sbjct: 954 LREAQSPEEPTPLPVPLLLPPP 975


>gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens]
          Length = 931

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)

Query: 28  AVVLSRHQAPFDPRPLPTPLLLLTPRSSQILYG 60
           +VV+ +     +P P+P P LLL P+   ++ G
Sbjct: 620 SVVVKQEALQPEPEPVPAPQLLLGPQGPSLIKG 652


>gi|10181096 adenylate cyclase 6 isoform a [Homo sapiens]
          Length = 1168

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 16  LGLGLALAVIVLAVVLSRHQAPFDPRPLPTPLL 48
           L L +A+ V++ AV+L+ H AP  P+P    LL
Sbjct: 152 LTLLMAVLVLLTAVLLAFHAAPARPQPAYVALL 184


>gi|10947061 adenylate cyclase 6 isoform b [Homo sapiens]
          Length = 1115

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 16  LGLGLALAVIVLAVVLSRHQAPFDPRPLPTPLL 48
           L L +A+ V++ AV+L+ H AP  P+P    LL
Sbjct: 152 LTLLMAVLVLLTAVLLAFHAAPARPQPAYVALL 184


>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
           sapiens]
          Length = 1560

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)

Query: 9   GDLVLLGLGLGLALAVIVLAVVLSRHQAPFDPRP---LPTPLLLLTPR 53
           G  + +  GLG +  V    V+L R   P  P+P   LP  L  LTP+
Sbjct: 322 GQPLAVAPGLGSSPLVPAPNVILHRTPTPIQPKPAGVLPPKLYQLTPK 369


>gi|110735443 delta-like 1 [Homo sapiens]
          Length = 723

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 12/32 (37%), Positives = 20/32 (62%)

Query: 9   GDLVLLGLGLGLALAVIVLAVVLSRHQAPFDP 40
           G +++L L LG A  V+ + + L +H+ P DP
Sbjct: 551 GVILVLMLLLGCAAVVVCVRLRLQKHRPPADP 582


>gi|19913375 G6B protein isoform G6b-B precursor [Homo sapiens]
          Length = 241

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 13  LLGLGLGLALAVIVLAVVLSRHQAPFDPRPLP--TPLLLLTPR 53
           LLG GL L L  + L   L R   P   RPLP   PL+   P+
Sbjct: 147 LLGAGLVLGLGALGLVWWLHRRLPPQPIRPLPRFAPLVKTEPQ 189


>gi|117938768 GNAS complex locus alex [Homo sapiens]
          Length = 626

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 37  PFDPRPLPTPLLLLTPRSSQILYGRKLHI 65
           P  P+P+PTP   LTP+  Q + GR L +
Sbjct: 384 PLTPQPIPTPGRPLTPQPIQ-MPGRPLRL 411


>gi|19913385 G6B protein isoform G6b-G precursor [Homo sapiens]
          Length = 222

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 13  LLGLGLGLALAVIVLAVVLSRHQAPFDPRPLPTPLLLLTPRSS 55
           LLG GL L L  + L   L R   P   RPLP    L  P SS
Sbjct: 147 LLGAGLVLGLGALGLVWWLHRRLPPQPIRPLPR-FALSPPHSS 188


>gi|19913373 G6B protein isoform G6b-A precursor [Homo sapiens]
          Length = 237

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 13  LLGLGLGLALAVIVLAVVLSRHQAPFDPRPLPTPLLLLTPRSS 55
           LLG GL L L  + L   L R   P   RPLP    L  P SS
Sbjct: 147 LLGAGLVLGLGALGLVWWLHRRLPPQPIRPLPR-FALSPPHSS 188


>gi|61175227 ribonuclease, RNase A family, 10 (non-active) [Homo
          sapiens]
          Length = 216

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 11 LVLLGLGLGLALAVIVLAVVLSRHQAPFD 39
          ++LLGLG+GL L + +   VL     P +
Sbjct: 14 MLLLGLGMGLGLGLHMATAVLEESDQPLN 42


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.329    0.147    0.455 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,788,772
Number of Sequences: 37866
Number of extensions: 113645
Number of successful extensions: 610
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 587
Number of HSP's gapped (non-prelim): 24
length of query: 69
length of database: 18,247,518
effective HSP length: 42
effective length of query: 27
effective length of database: 16,657,146
effective search space: 449742942
effective search space used: 449742942
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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