Search of human proteins with 113428936

Search of human proteins with 113428936

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|113428936 PREDICTED: hypothetical protein [Homo sapiens]
         (235 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|113428936 PREDICTED: hypothetical protein [Homo sapiens]           490   e-139
gi|113428809 PREDICTED: hypothetical protein [Homo sapiens]           486   e-138
gi|169214712 PREDICTED: hypothetical protein [Homo sapiens]           481   e-136
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]            47   2e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    40   0.002
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    39   0.004
gi|239756720 PREDICTED: hypothetical protein XP_002345024 [Homo ...    38   0.007
gi|239751215 PREDICTED: hypothetical protein XP_002347750 [Homo ...    38   0.007
gi|239745705 PREDICTED: hypothetical protein XP_002343521 [Homo ...    38   0.007
gi|237512940 early growth response 4 [Homo sapiens]                    38   0.009
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]       38   0.009
gi|55953100 tubby like protein 4 isoform 1 [Homo sapiens]              37   0.011
gi|191252814 RIMS binding protein 3B [Homo sapiens]                    37   0.015
gi|191252806 RIMS binding protein 3C [Homo sapiens]                    37   0.015
gi|66529407 tensin [Homo sapiens]                                      37   0.015
gi|153792195 DKFZP434H0735 protein [Homo sapiens]                      37   0.015
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]         37   0.015
gi|239756380 PREDICTED: hypothetical protein [Homo sapiens]            36   0.025
gi|239750901 PREDICTED: hypothetical protein XP_002347602 [Homo ...    36   0.025
gi|239745293 PREDICTED: hypothetical protein XP_002343426 [Homo ...    36   0.025
gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]         36   0.025
gi|239753500 PREDICTED: hypothetical protein [Homo sapiens]            36   0.033
gi|239748051 PREDICTED: hypothetical protein XP_002346521 [Homo ...    35   0.043
gi|239741944 PREDICTED: hypothetical protein XP_002342359 [Homo ...    35   0.043
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    35   0.043
gi|27262649 ataxin 2 related protein isoform C [Homo sapiens]          35   0.043
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho...    35   0.073
gi|27262653 ataxin 2 related protein isoform E [Homo sapiens]          35   0.073
gi|27262645 ataxin 2 related protein isoform B [Homo sapiens]          34   0.095
gi|27262647 ataxin 2 related protein isoform A [Homo sapiens]          34   0.095

>gi|113428936 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 235

 Score =  490 bits (1261), Expect = e-139
 Identities = 235/235 (100%), Positives = 235/235 (100%)

Query: 1   MQIPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGW 60
           MQIPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGW
Sbjct: 1   MQIPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGW 60

Query: 61  DRSQPHFRRLHSPPGSDPFQQPPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPP 120
           DRSQPHFRRLHSPPGSDPFQQPPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPP
Sbjct: 61  DRSQPHFRRLHSPPGSDPFQQPPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPP 120

Query: 121 GWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHT 180
           GWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHT
Sbjct: 121 GWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHT 180

Query: 181 TDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS 235
           TDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS
Sbjct: 181 TDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS 235


>gi|113428809 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 235

 Score =  486 bits (1251), Expect = e-138
 Identities = 234/235 (99%), Positives = 234/235 (99%)

Query: 1   MQIPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGW 60
           MQIPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGW
Sbjct: 1   MQIPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGW 60

Query: 61  DRSQPHFRRLHSPPGSDPFQQPPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPP 120
           DRSQPHFRRLHSPPGSDPFQQPPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPP
Sbjct: 61  DRSQPHFRRLHSPPGSDPFQQPPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPP 120

Query: 121 GWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHT 180
           GWKKTAGGWRMRCAGISPRT AVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHT
Sbjct: 121 GWKKTAGGWRMRCAGISPRTLAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHT 180

Query: 181 TDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS 235
           TDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS
Sbjct: 181 TDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS 235


>gi|169214712 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 235

 Score =  481 bits (1237), Expect = e-136
 Identities = 232/235 (98%), Positives = 232/235 (98%)

Query: 1   MQIPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGW 60
           MQIPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKN ESYPSSAFQPPNPRQEGAR GW
Sbjct: 1   MQIPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGW 60

Query: 61  DRSQPHFRRLHSPPGSDPFQQPPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPP 120
           DRSQPHFRRLHSPPGSDPFQQPPSRPINAAA SASRGDILAKTGIKSEIQALEAKAAVPP
Sbjct: 61  DRSQPHFRRLHSPPGSDPFQQPPSRPINAAARSASRGDILAKTGIKSEIQALEAKAAVPP 120

Query: 121 GWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHT 180
           GWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHT
Sbjct: 121 GWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHT 180

Query: 181 TDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS 235
           TDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS
Sbjct: 181 TDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS 235


>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 350

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 71/244 (29%), Positives = 92/244 (37%), Gaps = 36/244 (14%)

Query: 6   ASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGWDRSQP 65
           A+ PG   SP RP V+      A    R   +  +  SS+F PP        P   R+  
Sbjct: 11  AAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPG----FIHPPSSRAAV 66

Query: 66  HFRRLHSPPGSDPFQQP---PSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPPGW 122
           H  RL + P + P   P      P    AL+ SR    A         A + +AA P G 
Sbjct: 67  H-SRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAA-------AHDQEAAAPTGR 118

Query: 123 KKTAGGWRMRCAGISPRTPAVSCSPFRKVP------LYLHPPLQFGARPRAQLPAG---- 172
           +     WR R  G SP     S  P  + P        L PP   G RPRA+   G    
Sbjct: 119 R-----WRRR-PGPSPPLQPRSRHPHTRYPRAVPEATPLRPPP--GTRPRAKSRPGCRSS 170

Query: 173 SLCPRPHTTDSA--YRTLPGPRGPR-GDLLKPTRLLGASPDAYLESGGRQSSRNAREKSG 229
               R  T   A   R  P PR PR GD  + +  L  +P     S GR++ + A  K  
Sbjct: 171 PFPARSRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGT 230

Query: 230 RQRP 233
             +P
Sbjct: 231 TPQP 234


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 47/170 (27%), Positives = 65/170 (38%), Gaps = 15/170 (8%)

Query: 34  GTKNGESYPSSAFQPPNPRQEGARPGWDRSQPHFRRLHSP---PGSDPFQQPPSRPINAA 90
           G   G+S P     PP P Q+  +P   +  P     H P   P     QQPP  P +++
Sbjct: 48  GPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSS 107

Query: 91  ALSASRGDILAKTGIKSEIQALEAKAAVPPGWKKTAGGWRMRCAGISPR-TPAVSCSPFR 149
               ++G   A  G+ S   A  A ++ PP    T+G       G +P   PAV+ +P  
Sbjct: 108 KPVVAQGPGPA-PGVGS---APPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPG 163

Query: 150 KVPLYLHPPLQFGARPRAQLPAGSLCPRPHTTDS---AYRTLPGPRGPRG 196
             P    P       P     AG   P P          +  PGP GP+G
Sbjct: 164 APP----PTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKG 209


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 51/201 (25%), Positives = 67/201 (33%), Gaps = 15/201 (7%)

Query: 4   PVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGWDRS 63
           P  ++P     P  P     TP P A         ++ PS    PP        P    +
Sbjct: 596 PALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNA 655

Query: 64  ------QPHFRRLHSPPGSDPFQQPPSRPINAAALSASRGD-ILAKTGIK-----SEIQA 111
                 Q  F    SPP   PF  P S P++ +A   S+    LA   ++          
Sbjct: 656 LAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPP 715

Query: 112 LEAKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCS---PFRKVPLYLHPPLQFGARPRAQ 168
           +   A  PP          ++     P +P +S S   P R  PL   PPLQ    P A 
Sbjct: 716 MSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPAS 775

Query: 169 LPAGSLCPRPHTTDSAYRTLP 189
           LP   L   P     A  T P
Sbjct: 776 LPMSPLAKPPPQAPPALATPP 796



 Score = 30.8 bits (68), Expect = 1.1
 Identities = 58/234 (24%), Positives = 87/234 (37%), Gaps = 36/234 (15%)

Query: 3   IPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNGES--YPSSAFQPPNPRQEGARPGW 60
           IP    P  + SP   +    +P+  +S Q  T  G      + +F   +PRQ  A    
Sbjct: 386 IPPIQVPHSLTSPSLQAPP--SPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQA---- 439

Query: 61  DRSQPHFRRLHSPPGSDPFQQP---PSRPINAAALSASRGDILAKTGIKSEIQALEAKAA 117
             + P  R   +PP S P Q P   P+ P    +LS +   + +   I   +QAL + A+
Sbjct: 440 SLTSPS-RPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTI-HPLQALSSLAS 497

Query: 118 VPPGWKKTA-----GGWRMRCAGISPRTPAVSCS--PFRKVPLYLHPPLQFGARPRA--- 167
             P    ++        +   A  S +TP  S +  P   +P    PPLQ  + P     
Sbjct: 498 HSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPH 557

Query: 168 ------------QLPAGSLCPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASP 209
                       Q P   L   P  T S+  T P P+ P      P + L + P
Sbjct: 558 LETPPCPAPCPLQAPPSPLTTPPPETPSSIAT-PPPQAPPALASPPLQGLPSPP 610



 Score = 28.1 bits (61), Expect = 6.8
 Identities = 52/205 (25%), Positives = 61/205 (29%), Gaps = 42/205 (20%)

Query: 24  TPIPAA---SAQRGTKNGESYPSSAFQPPNPRQEGARPGWDRSQPHFRRLHSPPGSDPFQ 80
           TP PA    S   GT+ G   P+ + +P  P  EG R     +  H     SP       
Sbjct: 171 TPSPAMARRSRAAGTEVGLPRPAPSARP-RPPTEGPRKSVSSASEHSTTEPSPAAR---- 225

Query: 81  QPPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPPGWKKTAGGWRMRCAGISPRT 140
               RP     L        A   + S    L + A   P  + T            PR 
Sbjct: 226 ---RRPSAGGGLQRP-----ASRSLSSSATPLSSPARSGPSARGT------------PRA 265

Query: 141 PAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHTT--------------DSAYR 186
           PA    P  K    L PP     R  A    G L   P  T              D+A  
Sbjct: 266 PAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAAT 325

Query: 187 TLPGPRGPRGDLLKPTRLLGASPDA 211
            LP    P   L  P  L   SP A
Sbjct: 326 PLPATLPPSPPLATPLPLAPPSPSA 350



 Score = 28.1 bits (61), Expect = 6.8
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 5/66 (7%)

Query: 24  TPIPAASAQRGTK--NGESYPSSAFQPPNPRQEGA---RPGWDRSQPHFRRLHSPPGSDP 78
           TP P+ +  R     +  + P  A  PP+P         P    + P  + L SPP + P
Sbjct: 306 TPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPP 365

Query: 79  FQQPPS 84
            Q PPS
Sbjct: 366 SQAPPS 371


>gi|239756720 PREDICTED: hypothetical protein XP_002345024 [Homo
           sapiens]
          Length = 303

 Score = 38.1 bits (87), Expect = 0.007
 Identities = 40/130 (30%), Positives = 48/130 (36%), Gaps = 16/130 (12%)

Query: 111 ALEAKAAVPPGWKKTAGGWR-------MRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGA 163
           A     AV   W K  G WR        RC G   + PA  C+     P  L P    GA
Sbjct: 97  AAPGNTAVTIWWLKKLGSWRSLALAVLQRCRG---QVPADHCAAEAVGPWRLGP----GA 149

Query: 164 RPRAQLPAGSLCPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRN 223
           + + +L A     R H    AY   PGP GP     +P  L   +    LE   R S+  
Sbjct: 150 KEKKRLSASQARLRSHLQPGAYCQAPGP-GPHHQ-QRPRPLGSIAAQEGLEQLLRLSTPR 207

Query: 224 AREKSGRQRP 233
           A     R RP
Sbjct: 208 ATLPGARSRP 217


>gi|239751215 PREDICTED: hypothetical protein XP_002347750 [Homo
           sapiens]
          Length = 303

 Score = 38.1 bits (87), Expect = 0.007
 Identities = 40/130 (30%), Positives = 48/130 (36%), Gaps = 16/130 (12%)

Query: 111 ALEAKAAVPPGWKKTAGGWR-------MRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGA 163
           A     AV   W K  G WR        RC G   + PA  C+     P  L P    GA
Sbjct: 97  AAPGNTAVTIWWLKKLGSWRSLALAVLQRCRG---QVPADHCAAEAVGPWRLGP----GA 149

Query: 164 RPRAQLPAGSLCPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRN 223
           + + +L A     R H    AY   PGP GP     +P  L   +    LE   R S+  
Sbjct: 150 KEKKRLSASQARLRSHLQPGAYCQAPGP-GPHHQ-QRPRPLGSIAAQEGLEQLLRLSTPR 207

Query: 224 AREKSGRQRP 233
           A     R RP
Sbjct: 208 ATLPGARSRP 217


>gi|239745705 PREDICTED: hypothetical protein XP_002343521 [Homo
           sapiens]
          Length = 303

 Score = 38.1 bits (87), Expect = 0.007
 Identities = 40/130 (30%), Positives = 48/130 (36%), Gaps = 16/130 (12%)

Query: 111 ALEAKAAVPPGWKKTAGGWR-------MRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGA 163
           A     AV   W K  G WR        RC G   + PA  C+     P  L P    GA
Sbjct: 97  AAPGNTAVTIWWLKKLGSWRSLALAVLQRCRG---QVPADHCAAEAVGPWRLGP----GA 149

Query: 164 RPRAQLPAGSLCPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRN 223
           + + +L A     R H    AY   PGP GP     +P  L   +    LE   R S+  
Sbjct: 150 KEKKRLSASQARLRSHLQPGAYCQAPGP-GPHHQ-QRPRPLGSIAAQEGLEQLLRLSTPR 207

Query: 224 AREKSGRQRP 233
           A     R RP
Sbjct: 208 ATLPGARSRP 217


>gi|237512940 early growth response 4 [Homo sapiens]
          Length = 589

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 58/222 (26%), Positives = 83/222 (37%), Gaps = 45/222 (20%)

Query: 23  DTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGWDRSQPHFRR---LHSPPGSDP- 78
           + P P A A R  + GE  P ++  P  P+ + ARP      PH RR   LH    S+P 
Sbjct: 59  ECPKPGARAPRSVRCGEPLPPASPPPARPQAQRARP----RAPHSRRRAMLHLSEFSEPD 114

Query: 79  -----------------FQQPPSRPINAAALSASRGDILA-------KTGIKSEIQALEA 114
                              + P+R   AA      GD L+        +G  ++   LE 
Sbjct: 115 ALLVKSTEGCCAEPSAELPRLPARDAPAATGYPGAGDFLSWALNSCGASGDLADSCFLEG 174

Query: 115 KAAVPPGWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHP-PLQFGARPRAQLPAGS 173
            A  PP     +G + ++     P  P    +    + L L P P    A  R+ L A  
Sbjct: 175 PAPTPPPGLSYSGSFFIQAVPEHPHDPEALFNLMSGI-LGLAPFPGPEAAASRSPLDA-- 231

Query: 174 LCPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLES 215
             P P  +D+    LPGP     DL  P       P+A+ E+
Sbjct: 232 --PFPAGSDA---LLPGP----PDLYSPDLGAAPFPEAFWEA 264


>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
          Length = 788

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 24/185 (12%)

Query: 42  PSSAFQPPNPRQEGAR-PGWDRSQPHFRRLHSPPGSDPFQQPPSRPINAAALSASRGDIL 100
           P    QPP  + + ++ P   ++QP   +  + PG   + QPP + + A  +        
Sbjct: 302 PPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQP 361

Query: 101 AKTGIKSEIQALEAKAAVPPGWKK-----TAGGWRMRCAGISPRTPAVSCSPFRKVPLYL 155
                ++ +Q  +A   V PG +        GG  +R     P T AVS  P   +PL  
Sbjct: 362 QVQQQQTAVQTAQAAQMVAPGVQMITEALAQGGMHIRAR--FPPTTAVSAIPSSSIPL-- 417

Query: 156 HPPLQFGARPRAQLPAGSL----CPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASPDA 211
                 G +P AQ+   SL     P P       +++P P  P     +P+    + P++
Sbjct: 418 ------GRQPMAQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPS----SQPNS 467

Query: 212 YLESG 216
            + SG
Sbjct: 468 NVSSG 472


>gi|55953100 tubby like protein 4 isoform 1 [Homo sapiens]
          Length = 1543

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 15/107 (14%)

Query: 74   PGSDPFQQPPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPPGWKKTAGGWRMRC 133
            PGS  +  PP   + A     S  D L+ T    +  A+  +   PP          +  
Sbjct: 1192 PGS--YNNPPLPGVQAPC---SPKDALSPTQFAQQEPAVVLQPLYPPS---------LSY 1237

Query: 134  AGISPRTPAVS-CSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPH 179
              + P  P  S CS  +  P+ LHP   + A P  Q P G+L P+PH
Sbjct: 1238 CTLPPMYPGSSTCSSLQLPPVALHPWSSYSACPPMQNPQGTLPPKPH 1284


>gi|191252814 RIMS binding protein 3B [Homo sapiens]
          Length = 1639

 Score = 37.0 bits (84), Expect = 0.015
 Identities = 35/116 (30%), Positives = 43/116 (37%), Gaps = 19/116 (16%)

Query: 6   ASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGWDRSQP 65
           +S+P G+ S    S+ C  P    +  R   +  S P ++     P         D S P
Sbjct: 271 SSSPDGLLSTHASSLDCFAP----ACSRSLDSTRSLPKASKSEERPSSP------DTSTP 320

Query: 66  HFRRLHSPPGSDPFQQPPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPPG 121
             RRL  PP   P   PP  P     LS  RG      G  SE Q  E     PPG
Sbjct: 321 GSRRLSPPPSPLP---PPPPPSAHRKLSNPRG------GEGSESQPCEVLTPSPPG 367


>gi|191252806 RIMS binding protein 3C [Homo sapiens]
          Length = 1639

 Score = 37.0 bits (84), Expect = 0.015
 Identities = 35/116 (30%), Positives = 43/116 (37%), Gaps = 19/116 (16%)

Query: 6   ASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGWDRSQP 65
           +S+P G+ S    S+ C  P    +  R   +  S P ++     P         D S P
Sbjct: 271 SSSPDGLLSTHASSLDCFAP----ACSRSLDSTRSLPKASKSEERPSSP------DTSTP 320

Query: 66  HFRRLHSPPGSDPFQQPPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPPG 121
             RRL  PP   P   PP  P     LS  RG      G  SE Q  E     PPG
Sbjct: 321 GSRRLSPPPSPLP---PPPPPSAHRKLSNPRG------GEGSESQPCEVLTPSPPG 367


>gi|66529407 tensin [Homo sapiens]
          Length = 1735

 Score = 37.0 bits (84), Expect = 0.015
 Identities = 62/250 (24%), Positives = 82/250 (32%), Gaps = 64/250 (25%)

Query: 4   PVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQP----PNPRQEGARPG 59
           P+  +  G + P   S+    P P AS +     G SY    +QP    PN       P 
Sbjct: 758 PLTQSRSG-YIPSGHSLGTPEPAPRASLE-SVPPGRSYSPYDYQPCLAGPNQDFHSKSPA 815

Query: 60  WDRSQPHFRRLHSPPG-----------------------SDPFQQPPSRPINAAALSASR 96
                      HSPPG                       SDP + P   P+N   L A R
Sbjct: 816 SSSLPAFLPTTHSPPGPQQPPASLPGLTAQPLLSPKEATSDPSRTPEEEPLNLEGLVAHR 875

Query: 97  GDILAKTGIKSEIQALEAKAAVPPG--WKKTAGGWR---MRCAGISPRTPAVSCSPFRKV 151
                     + +QA E + A PP    ++ A   +         SPR+P V  SP + V
Sbjct: 876 ---------VAGVQAREKQPAEPPAPLRRRAASDGQYENQSPEATSPRSPGVR-SPVQCV 925

Query: 152 --PLYLHPPLQFGARPRAQLPAGSLCPRPHTTDSAYRTLPGP----------RGPRGDLL 199
              L L   L  G RP+         P  H+   A+  + G           R P G   
Sbjct: 926 SPELALTIALNPGGRPKE--------PHLHSYKEAFEEMEGTSPSSPPPSGVRSPPGLAK 977

Query: 200 KPTRLLGASP 209
            P   LG  P
Sbjct: 978 TPLSALGLKP 987


>gi|153792195 DKFZP434H0735 protein [Homo sapiens]
          Length = 1639

 Score = 37.0 bits (84), Expect = 0.015
 Identities = 35/116 (30%), Positives = 43/116 (37%), Gaps = 19/116 (16%)

Query: 6   ASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGWDRSQP 65
           +S+P G+ S    S+ C  P    +  R   +  S P ++     P         D S P
Sbjct: 271 SSSPDGLLSTHASSLDCFAP----ACSRSLDSTRSLPKASKSEERPSSP------DTSTP 320

Query: 66  HFRRLHSPPGSDPFQQPPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPPG 121
             RRL  PP   P   PP  P     LS  RG      G  SE Q  E     PPG
Sbjct: 321 GSRRLSPPPSPLP---PPPPPSAHRKLSNPRG------GEGSESQPCEVLTPSPPG 367


>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
          Length = 1003

 Score = 37.0 bits (84), Expect = 0.015
 Identities = 61/217 (28%), Positives = 81/217 (37%), Gaps = 35/217 (16%)

Query: 4   PVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGWD-- 61
           P  + PGG+F P    ++   P   +S+ R    G + PS A  PP P      P ++  
Sbjct: 176 PTLAGPGGLFPP---RLADPVPSGGSSSPRFLPRGNA-PSPA-PPPPPAISLNAPSYNWG 230

Query: 62  ---RSQPHFRRLHSPPGSDPFQQPPSRP--------INAAALSASRGDILAKTGIKSEIQ 110
              RS      L SPP       PPS P        +    L  S  ++ A  G  S+  
Sbjct: 231 AALRSSLVPSDLGSPPAPHASSSPPSDPPLFHCSDALTPPPLPPSN-NLPAHPGPASQPP 289

Query: 111 ALEAKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQ-----FGARP 165
              A   +P       G   +   G  P   +   S   K     HPPL       G RP
Sbjct: 290 VSSATMHLPLVLGPLGGAPTVEGPGAPPFLASSLLSAAAKAQ---HPPLPPPSTLQGRRP 346

Query: 166 RAQLP----AGSLCP---RPHTTDSAYRTLPGPRGPR 195
           RAQ P    + SL P   RP    + +R L G RGP+
Sbjct: 347 RAQAPSASHSSSLRPSQRRPRRPPTVFRLLEG-RGPQ 382



 Score = 30.4 bits (67), Expect = 1.4
 Identities = 31/94 (32%), Positives = 37/94 (39%), Gaps = 21/94 (22%)

Query: 137 SPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPA--------GSLCPRPHTTDSAYRTL 188
           S  +P    SP     +   PP    ARP  ++P         GSL P P +   A+ TL
Sbjct: 122 SHSSPGEGASPQMFHTVSPGPP---SARPPCRVPPTTPLNGGPGSLPPEPPSVSQAFPTL 178

Query: 189 PGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSR 222
            GP G     L P RL    P     SGG  S R
Sbjct: 179 AGPGG-----LFPPRLADPVP-----SGGSSSPR 202


>gi|239756380 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 151

 Score = 36.2 bits (82), Expect = 0.025
 Identities = 42/136 (30%), Positives = 51/136 (37%), Gaps = 16/136 (11%)

Query: 90  AALSASRGDILAKTGIKSEIQALEAKAAVPPGWKKTAGGWRMRCAGI-----SPRTPAVS 144
           A  +A   +I A+ G     Q  E +AA  P   +  G    R A        P     +
Sbjct: 18  AGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAA 77

Query: 145 CSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHTTDSAYRTLPG---PRGPRGDLLKP 201
             PF+  PL   P L  GA PRA+ P      RPH        LPG   P GP  DL   
Sbjct: 78  FDPFKSAPLGAEPALSSGAVPRARRPP----RRPHPP----ARLPGRGTPFGPPRDLHTH 129

Query: 202 TRLLGASPDAYLESGG 217
           T     +P     SGG
Sbjct: 130 TLARTRAPLPPGASGG 145


>gi|239750901 PREDICTED: hypothetical protein XP_002347602 [Homo
           sapiens]
          Length = 151

 Score = 36.2 bits (82), Expect = 0.025
 Identities = 42/136 (30%), Positives = 51/136 (37%), Gaps = 16/136 (11%)

Query: 90  AALSASRGDILAKTGIKSEIQALEAKAAVPPGWKKTAGGWRMRCAGI-----SPRTPAVS 144
           A  +A   +I A+ G     Q  E +AA  P   +  G    R A        P     +
Sbjct: 18  AGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAA 77

Query: 145 CSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHTTDSAYRTLPG---PRGPRGDLLKP 201
             PF+  PL   P L  GA PRA+ P      RPH        LPG   P GP  DL   
Sbjct: 78  FDPFKSAPLGAEPALSSGAVPRARRPP----RRPHPP----ARLPGRGTPFGPPRDLHTH 129

Query: 202 TRLLGASPDAYLESGG 217
           T     +P     SGG
Sbjct: 130 TLARTRAPLPPGASGG 145


>gi|239745293 PREDICTED: hypothetical protein XP_002343426 [Homo
           sapiens]
          Length = 151

 Score = 36.2 bits (82), Expect = 0.025
 Identities = 42/136 (30%), Positives = 51/136 (37%), Gaps = 16/136 (11%)

Query: 90  AALSASRGDILAKTGIKSEIQALEAKAAVPPGWKKTAGGWRMRCAGI-----SPRTPAVS 144
           A  +A   +I A+ G     Q  E +AA  P   +  G    R A        P     +
Sbjct: 18  AGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAA 77

Query: 145 CSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHTTDSAYRTLPG---PRGPRGDLLKP 201
             PF+  PL   P L  GA PRA+ P      RPH        LPG   P GP  DL   
Sbjct: 78  FDPFKSAPLGAEPALSSGAVPRARRPP----RRPHPP----ARLPGRGTPFGPPRDLHTH 129

Query: 202 TRLLGASPDAYLESGG 217
           T     +P     SGG
Sbjct: 130 TLARTRAPLPPGASGG 145


>gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]
          Length = 370

 Score = 36.2 bits (82), Expect = 0.025
 Identities = 41/143 (28%), Positives = 56/143 (39%), Gaps = 28/143 (19%)

Query: 75  GSDPFQQPPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPPGWKKTA-------- 126
           G  P +  P  P +A+A  A+    +AK+  K+ +  L+A AA   G  +          
Sbjct: 37  GPAPRRTAPPPPGHASAGPAAMSSHIAKSESKTSL--LKAAAAAASGGSRAPRHGPARDP 94

Query: 127 GGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGA------------RPRAQLPAGSL 174
           G    R  G  P TP  S  P  + PL    P + GA            RPR  LPA + 
Sbjct: 95  GLPSRRLPGSCPATPQSSGDPSSRRPLCRPAPREEGARGSQRVLPQAHCRPREALPAAAS 154

Query: 175 CPRPHTTDSAYRTLPGPRGPRGD 197
            P P +       LP  RG  G+
Sbjct: 155 RPSPSS------PLPPARGRDGE 171


>gi|239753500 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 213

 Score = 35.8 bits (81), Expect = 0.033
 Identities = 32/120 (26%), Positives = 41/120 (34%), Gaps = 24/120 (20%)

Query: 49  PNPRQEGARPGWDRSQPHFRRLHSPPGSDPFQQPPSRPINAAALSASRGDILAKTGIKSE 108
           P+PR   AR       P   RL  P   +P  + P+R +  AA SA R    A  G +  
Sbjct: 11  PSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGARGS 70

Query: 109 IQALEAKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQ 168
              L A   + P                 PR P    +P        HP L    RP A+
Sbjct: 71  TPGLAASRELSP----------------PPRAPRTVPAP--------HPRLSPARRPGAE 106


>gi|239748051 PREDICTED: hypothetical protein XP_002346521 [Homo
           sapiens]
          Length = 213

 Score = 35.4 bits (80), Expect = 0.043
 Identities = 32/120 (26%), Positives = 40/120 (33%), Gaps = 24/120 (20%)

Query: 49  PNPRQEGARPGWDRSQPHFRRLHSPPGSDPFQQPPSRPINAAALSASRGDILAKTGIKSE 108
           P PR   AR       P   RL  P   +P  + P+R +  AA SA R    A  G +  
Sbjct: 11  PRPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGARGS 70

Query: 109 IQALEAKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQ 168
              L A   + P                 PR P    +P        HP L    RP A+
Sbjct: 71  TPGLAASRELSP----------------PPRAPRTVPAP--------HPRLSPARRPGAE 106


>gi|239741944 PREDICTED: hypothetical protein XP_002342359 [Homo
           sapiens]
          Length = 213

 Score = 35.4 bits (80), Expect = 0.043
 Identities = 32/120 (26%), Positives = 40/120 (33%), Gaps = 24/120 (20%)

Query: 49  PNPRQEGARPGWDRSQPHFRRLHSPPGSDPFQQPPSRPINAAALSASRGDILAKTGIKSE 108
           P PR   AR       P   RL  P   +P  + P+R +  AA SA R    A  G +  
Sbjct: 11  PRPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGARGS 70

Query: 109 IQALEAKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQ 168
              L A   + P                 PR P    +P        HP L    RP A+
Sbjct: 71  TPGLAASRELSP----------------PPRAPRTVPAP--------HPRLSPARRPGAE 106


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 35.4 bits (80), Expect = 0.043
 Identities = 54/235 (22%), Positives = 81/235 (34%), Gaps = 42/235 (17%)

Query: 41   YPSSAFQPPNPRQEGA-------RPGWDRSQPHFRRLHSPPGSDPFQQPPSRPINAAALS 93
            YPS    P  P   GA       +PG   + P     H P   DPF +P    ++  A+ 
Sbjct: 2199 YPSPTGAPAQPPMLGASSRPGAGQPGEFHTTPPGTPRHQPSTPDPFLKPRCPSLDNLAVP 2258

Query: 94   ASRG--------DILAKTGIKSEIQALEAK----AAVPPGWKKTAGGW------RMRCAG 135
             S G         +L+        +ALE K     A  P +     G+           G
Sbjct: 2259 ESPGVGGGKASEPLLSPPPFGESRKALEVKKEELGASSPSYGPPNLGFVDSPSSGTHLGG 2318

Query: 136  ISPRTPAVSCSPFRKVPLYLHPPLQ-FGARPRAQLPAGSLCPRPHTTDSAYR-------- 186
            +  +TP V  +P       + P     G RP+   PA +L P P +    +R        
Sbjct: 2319 LELKTPDVFKAPLTPRASQVEPQSPGLGLRPQEPPPAQALAPSPPSHPDIFRPGSYTDPY 2378

Query: 187  ------TLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS 235
                    P P  P      P R L + P + + +     S+++ +     RPLS
Sbjct: 2379 AQPPLTPRPQPPPPESCCALPPRSLPSDPFSRVPAS--PQSQSSSQSPLTPRPLS 2431


>gi|27262649 ataxin 2 related protein isoform C [Homo sapiens]
          Length = 1097

 Score = 35.4 bits (80), Expect = 0.043
 Identities = 50/202 (24%), Positives = 74/202 (36%), Gaps = 14/202 (6%)

Query: 24   TPIPAASAQRGTKNGESYPSSAFQPPNP--RQEGARPGWDRSQPHFRRLHSPPGSDPFQQ 81
            T + A   Q  T    S P S    P+P   Q G  P     QP     H  PG+     
Sbjct: 866  TQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQAPHLGSGQPQQNLYH--PGALT-GT 922

Query: 82   PPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPPGWKKTAGGWRMRC-AGISPRT 140
            PPS P   +A S       +     + + A+  +  +P G+   A   +     GI+   
Sbjct: 923  PPSLPPGPSAQSPQ-----SSFPQPAAVYAIHHQQ-LPHGFTNMAHVTQAHVQTGITAAP 976

Query: 141  PAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHTTDSAYRTLPGPRGPRGDLLK 200
            P    +P     + LHPP   G  P+  +P   +     +T S Y  +  P+G +    +
Sbjct: 977  PPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSASTPSPYPYIGHPQGEQPG--Q 1034

Query: 201  PTRLLGASPDAYLESGGRQSSR 222
                 G + D  L   GR  SR
Sbjct: 1035 APGFPGGADDRILCRVGRSHSR 1056



 Score = 30.8 bits (68), Expect = 1.1
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 15  PGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGWDRSQPHFRRLHSPP 74
           PG P+ +     P A+A  G + G      A QPP P+Q   RPG          + S  
Sbjct: 49  PGPPAAASPCLGPVAAAGSGLRRGAE-GILAPQPPPPQQHQERPG-------AAAIGSAR 100

Query: 75  GSDPFQQPPSRPINAAALSASR 96
           G    + PP  P+     + SR
Sbjct: 101 GQSTGKGPPQSPVFEGVYNNSR 122


>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
           sapiens]
          Length = 1560

 Score = 34.7 bits (78), Expect = 0.073
 Identities = 51/194 (26%), Positives = 68/194 (35%), Gaps = 37/194 (19%)

Query: 4   PVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQP-PNPR------QEGA 56
           P  S P  V     P      P PA    +G   G   P S   P P P+       +G 
Sbjct: 714 PHLSVPASVIVSAPPPAQ--DPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGP 771

Query: 57  RPGWDRSQPHFRRLHSPPGSDPF------QQPPSRPINAAALSASRGDILAKTGIKSEIQ 110
            P    S PH     +P G  P        +PPSRP        SR   +++   +  + 
Sbjct: 772 GPSSSPSLPH----QAPLGDSPHLPSPHPTRPPSRP-------PSRPQSVSRPPSEPPLH 820

Query: 111 ALEAKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLP 170
                   PP    T  G  +    +    PA + +P    P    PPL    RP++Q P
Sbjct: 821 PCP-----PPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPP--QPPL----RPQSQPP 869

Query: 171 AGSLCPRPHTTDSA 184
            G L P PH   S+
Sbjct: 870 EGPLPPAPHLPPSS 883



 Score = 29.3 bits (64), Expect = 3.1
 Identities = 52/243 (21%), Positives = 70/243 (28%), Gaps = 30/243 (12%)

Query: 3   IPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKN----------GESYPSSAFQPPNPR 52
           + + +TP G+  P  P+ +     P  + Q   +           G   P +   P  P 
Sbjct: 593 VAMLNTPDGLVQPATPAAATGEAAPVLTVQPAPQAPPAVSTPLPLGLQQPQAQQPPQAPT 652

Query: 53  QEGARPGWDRSQPHFRRLHSPPGSDPFQQPPSRPINAAALSASRGDILAKTGIKSEIQAL 112
            + A P    +      L S P      QPPS    A     S    L +   +  + A 
Sbjct: 653 PQAAAPPQATTPQPSPGLASSPEKIVLGQPPSATPTAILTQDSLQMFLPQERSQQPLSAE 712

Query: 113 EAKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAG 172
               +VP                +S   PA   +P          P+  GA    Q P  
Sbjct: 713 GPHLSVPAS------------VIVSAPPPAQDPAPAT--------PVAKGAGLGPQAPDS 752

Query: 173 SLCPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQR 232
              P P     A   L GP       L     LG SP        R  SR         R
Sbjct: 753 QASPAPAPQIPAAAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSR 812

Query: 233 PLS 235
           P S
Sbjct: 813 PPS 815


>gi|27262653 ataxin 2 related protein isoform E [Homo sapiens]
          Length = 1044

 Score = 34.7 bits (78), Expect = 0.073
 Identities = 43/174 (24%), Positives = 64/174 (36%), Gaps = 12/174 (6%)

Query: 24   TPIPAASAQRGTKNGESYPSSAFQPPNP--RQEGARPGWDRSQPHFRRLHSPPGSDPFQQ 81
            T + A   Q  T    S P S    P+P   Q G  P     QP     H  PG+     
Sbjct: 866  TQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQAPHLGSGQPQQNLYH--PGALT-GT 922

Query: 82   PPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPPGWKKTAGGWRMRC-AGISPRT 140
            PPS P   +A S       +     + + A+  +  +P G+   A   +     GI+   
Sbjct: 923  PPSLPPGPSAQSPQ-----SSFPQPAAVYAIHHQQ-LPHGFTNMAHVTQAHVQTGITAAP 976

Query: 141  PAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHTTDSAYRTLPGPRGP 194
            P    +P     + LHPP   G  P+  +P   +     +T S Y  +  P+ P
Sbjct: 977  PPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSASTPSPYPYIGHPQAP 1030



 Score = 30.8 bits (68), Expect = 1.1
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 15  PGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGWDRSQPHFRRLHSPP 74
           PG P+ +     P A+A  G + G      A QPP P+Q   RPG          + S  
Sbjct: 49  PGPPAAASPCLGPVAAAGSGLRRGAE-GILAPQPPPPQQHQERPG-------AAAIGSAR 100

Query: 75  GSDPFQQPPSRPINAAALSASR 96
           G    + PP  P+     + SR
Sbjct: 101 GQSTGKGPPQSPVFEGVYNNSR 122


>gi|27262645 ataxin 2 related protein isoform B [Homo sapiens]
          Length = 1062

 Score = 34.3 bits (77), Expect = 0.095
 Identities = 43/173 (24%), Positives = 64/173 (36%), Gaps = 12/173 (6%)

Query: 24   TPIPAASAQRGTKNGESYPSSAFQPPNP--RQEGARPGWDRSQPHFRRLHSPPGSDPFQQ 81
            T + A   Q  T    S P S    P+P   Q G  P     QP     H  PG+     
Sbjct: 866  TQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQAPHLGSGQPQQNLYH--PGALT-GT 922

Query: 82   PPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPPGWKKTAGGWRMRC-AGISPRT 140
            PPS P   +A S       +     + + A+  +  +P G+   A   +     GI+   
Sbjct: 923  PPSLPPGPSAQSPQ-----SSFPQPAAVYAIHHQQ-LPHGFTNMAHVTQAHVQTGITAAP 976

Query: 141  PAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHTTDSAYRTLPGPRG 193
            P    +P     + LHPP   G  P+  +P   +     +T S Y  +  P+G
Sbjct: 977  PPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSASTPSPYPYIGHPQG 1029



 Score = 30.8 bits (68), Expect = 1.1
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 15  PGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGWDRSQPHFRRLHSPP 74
           PG P+ +     P A+A  G + G      A QPP P+Q   RPG          + S  
Sbjct: 49  PGPPAAASPCLGPVAAAGSGLRRGAE-GILAPQPPPPQQHQERPG-------AAAIGSAR 100

Query: 75  GSDPFQQPPSRPINAAALSASR 96
           G    + PP  P+     + SR
Sbjct: 101 GQSTGKGPPQSPVFEGVYNNSR 122


>gi|27262647 ataxin 2 related protein isoform A [Homo sapiens]
          Length = 1075

 Score = 34.3 bits (77), Expect = 0.095
 Identities = 43/173 (24%), Positives = 64/173 (36%), Gaps = 12/173 (6%)

Query: 24   TPIPAASAQRGTKNGESYPSSAFQPPNP--RQEGARPGWDRSQPHFRRLHSPPGSDPFQQ 81
            T + A   Q  T    S P S    P+P   Q G  P     QP     H  PG+     
Sbjct: 866  TQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQAPHLGSGQPQQNLYH--PGALT-GT 922

Query: 82   PPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPPGWKKTAGGWRMRC-AGISPRT 140
            PPS P   +A S       +     + + A+  +  +P G+   A   +     GI+   
Sbjct: 923  PPSLPPGPSAQSPQ-----SSFPQPAAVYAIHHQQ-LPHGFTNMAHVTQAHVQTGITAAP 976

Query: 141  PAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHTTDSAYRTLPGPRG 193
            P    +P     + LHPP   G  P+  +P   +     +T S Y  +  P+G
Sbjct: 977  PPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSASTPSPYPYIGHPQG 1029



 Score = 30.8 bits (68), Expect = 1.1
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 15  PGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGWDRSQPHFRRLHSPP 74
           PG P+ +     P A+A  G + G      A QPP P+Q   RPG          + S  
Sbjct: 49  PGPPAAASPCLGPVAAAGSGLRRGAE-GILAPQPPPPQQHQERPG-------AAAIGSAR 100

Query: 75  GSDPFQQPPSRPINAAALSASR 96
           G    + PP  P+     + SR
Sbjct: 101 GQSTGKGPPQSPVFEGVYNNSR 122


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.133    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,760,010
Number of Sequences: 37866
Number of extensions: 793781
Number of successful extensions: 3357
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 262
Number of HSP's that attempted gapping in prelim test: 2938
Number of HSP's gapped (non-prelim): 738
length of query: 235
length of database: 18,247,518
effective HSP length: 99
effective length of query: 136
effective length of database: 14,498,784
effective search space: 1971834624
effective search space used: 1971834624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.