Search of human proteins with 21314714

Search of human proteins with 21314714

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21314714 Hspb associated protein 1 [Homo sapiens]
         (488 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21314714 Hspb associated protein 1 [Homo sapiens]                 1016   0.0  
gi|223942018 jumonji domain containing 5 isoform 1 [Homo sapiens]      91   3e-18
gi|223942014 jumonji domain containing 5 isoform 2 [Homo sapiens]      91   3e-18
gi|148596936 hypoxia-inducible factor 1, alpha subunit inhibitor...    86   8e-17
gi|89242134 hypothetical protein LOC129450 [Homo sapiens]              76   8e-14
gi|167860114 jumonji domain containing 7 [Homo sapiens]                66   6e-11
gi|56090146 jumonji domain containing 8 [Homo sapiens]                 52   2e-06
gi|125988395 jumonji domain containing 6 isoform 1 [Homo sapiens]      48   2e-05
gi|125988389 jumonji domain containing 6 isoform 2 [Homo sapiens]      48   2e-05
gi|239788849 jumonji domain containing 4 isoform 2 [Homo sapiens]      46   9e-05
gi|239788847 jumonji domain containing 4 isoform 1 [Homo sapiens]      45   1e-04
gi|4826914 JMJD7-PLA2G4B protein [Homo sapiens]                        39   0.011
gi|106879206 chromosome 14 open reading frame 169 [Homo sapiens]       37   0.053
gi|16753205 ubiquilin 1 isoform 2 [Homo sapiens]                       32   1.7  
gi|16753203 ubiquilin 1 isoform 1 [Homo sapiens]                       32   1.7  
gi|4507681 thyrotropin-releasing hormone receptor [Homo sapiens]       32   1.7  
gi|41281453 serine/threonine kinase 2 [Homo sapiens]                   31   2.9  
gi|24415404 MDN1, midasin homolog [Homo sapiens]                       30   5.0  
gi|24429588 zinc finger protein 532 [Homo sapiens]                     29   8.5  

>gi|21314714 Hspb associated protein 1 [Homo sapiens]
          Length = 488

 Score = 1016 bits (2627), Expect = 0.0
 Identities = 488/488 (100%), Positives = 488/488 (100%)

Query: 1   MAAGSEATTPVIVAAGAGGEEGEHVKPFKPEKAKEIIMSLQQPAIFCNMVFDWPARHWNA 60
           MAAGSEATTPVIVAAGAGGEEGEHVKPFKPEKAKEIIMSLQQPAIFCNMVFDWPARHWNA
Sbjct: 1   MAAGSEATTPVIVAAGAGGEEGEHVKPFKPEKAKEIIMSLQQPAIFCNMVFDWPARHWNA 60

Query: 61  KYLSQVLHGKQIRFRMGMKSMSTVPQFETTCNYVEATLEEFLTWNCDQSSISGPFRDYDH 120
           KYLSQVLHGKQIRFRMGMKSMSTVPQFETTCNYVEATLEEFLTWNCDQSSISGPFRDYDH
Sbjct: 61  KYLSQVLHGKQIRFRMGMKSMSTVPQFETTCNYVEATLEEFLTWNCDQSSISGPFRDYDH 120

Query: 121 SKFWAYADYKYFVSLFEDKTDLFQDVKWSDFGFPGRNGQESTLWIGSLGAHTPCHLDSYG 180
           SKFWAYADYKYFVSLFEDKTDLFQDVKWSDFGFPGRNGQESTLWIGSLGAHTPCHLDSYG
Sbjct: 121 SKFWAYADYKYFVSLFEDKTDLFQDVKWSDFGFPGRNGQESTLWIGSLGAHTPCHLDSYG 180

Query: 181 CNLVFQVQGRKRWHLFPPEDTPFLYPTRIPYEESSVFSKINVVNPDLKRFPQFRKAQRHA 240
           CNLVFQVQGRKRWHLFPPEDTPFLYPTRIPYEESSVFSKINVVNPDLKRFPQFRKAQRHA
Sbjct: 181 CNLVFQVQGRKRWHLFPPEDTPFLYPTRIPYEESSVFSKINVVNPDLKRFPQFRKAQRHA 240

Query: 241 VTLSPGQVLFVPRHWWHYVESIDPVTVSINSWIELEEDHLARVEEAITRMLVCALKTAEN 300
           VTLSPGQVLFVPRHWWHYVESIDPVTVSINSWIELEEDHLARVEEAITRMLVCALKTAEN
Sbjct: 241 VTLSPGQVLFVPRHWWHYVESIDPVTVSINSWIELEEDHLARVEEAITRMLVCALKTAEN 300

Query: 301 PQNTRAWLNPTEVEETSHAVNCCYLNAAVSAFFDRCRTSEVVEIQALRTDGEHMKKEELN 360
           PQNTRAWLNPTEVEETSHAVNCCYLNAAVSAFFDRCRTSEVVEIQALRTDGEHMKKEELN
Sbjct: 301 PQNTRAWLNPTEVEETSHAVNCCYLNAAVSAFFDRCRTSEVVEIQALRTDGEHMKKEELN 360

Query: 361 VCNHMEVGQTGSQNLTTGTDKPEAASPFGPDLVPVAQRSEEPPSERGGIFGSDGKDFVDK 420
           VCNHMEVGQTGSQNLTTGTDKPEAASPFGPDLVPVAQRSEEPPSERGGIFGSDGKDFVDK
Sbjct: 361 VCNHMEVGQTGSQNLTTGTDKPEAASPFGPDLVPVAQRSEEPPSERGGIFGSDGKDFVDK 420

Query: 421 DGEHFGKLHCAKRQQIMSNSENAIEEQIASNTTTTPQTFISTDDLLDCLVNPQVTRIVAQ 480
           DGEHFGKLHCAKRQQIMSNSENAIEEQIASNTTTTPQTFISTDDLLDCLVNPQVTRIVAQ
Sbjct: 421 DGEHFGKLHCAKRQQIMSNSENAIEEQIASNTTTTPQTFISTDDLLDCLVNPQVTRIVAQ 480

Query: 481 LLIQGRSL 488
           LLIQGRSL
Sbjct: 481 LLIQGRSL 488


>gi|223942018 jumonji domain containing 5 isoform 1 [Homo sapiens]
          Length = 454

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 28/235 (11%)

Query: 42  QPAIFCNMVFDWPA-RHWNAKYLSQVLHGKQIRFRMGMKSMSTVPQFETTCNYVEATLEE 100
           +P I   +   WP  + W+ +Y+ ++   + +   +G  S  T  ++  T   V   + +
Sbjct: 242 RPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVG--SRYTDEEWSQTLMTVNEFISK 299

Query: 101 FLTWNCDQSSISGPFRDYDHSKFWAYADYKYFVSLFEDKTDLFQDVKWSDFGFPGRNGQE 160
           ++        ++ P RD           Y     LF+   +L QD+   D+   G   +E
Sbjct: 300 YI--------VNEP-RD---------VGYLAQHQLFDQIPELKQDISIPDYCSLGDGEEE 341

Query: 161 S---TLWIGSLGAHTPCHLDSYGCNLVFQVQGRKRWHLFPPEDTPFLYPTRIPYEESSVF 217
                 W G  G  +P H D    N + QV GRK   L+ P+++  LYP       ++  
Sbjct: 342 EITINAWFGPQGTISPLHQDPQQ-NFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNT-- 398

Query: 218 SKINVVNPDLKRFPQFRKAQRHAVTLSPGQVLFVPRHWWHYVESIDPVTVSINSW 272
           S+++V NPDL++FP+F KA   +  LSPG++LF+P  +WHYV ++D ++ S++ W
Sbjct: 399 SQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALD-LSFSVSFW 452


>gi|223942014 jumonji domain containing 5 isoform 2 [Homo sapiens]
          Length = 416

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 28/235 (11%)

Query: 42  QPAIFCNMVFDWPA-RHWNAKYLSQVLHGKQIRFRMGMKSMSTVPQFETTCNYVEATLEE 100
           +P I   +   WP  + W+ +Y+ ++   + +   +G  S  T  ++  T   V   + +
Sbjct: 204 RPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVG--SRYTDEEWSQTLMTVNEFISK 261

Query: 101 FLTWNCDQSSISGPFRDYDHSKFWAYADYKYFVSLFEDKTDLFQDVKWSDFGFPGRNGQE 160
           ++        ++ P RD           Y     LF+   +L QD+   D+   G   +E
Sbjct: 262 YI--------VNEP-RD---------VGYLAQHQLFDQIPELKQDISIPDYCSLGDGEEE 303

Query: 161 S---TLWIGSLGAHTPCHLDSYGCNLVFQVQGRKRWHLFPPEDTPFLYPTRIPYEESSVF 217
                 W G  G  +P H D    N + QV GRK   L+ P+++  LYP       ++  
Sbjct: 304 EITINAWFGPQGTISPLHQDPQQ-NFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNT-- 360

Query: 218 SKINVVNPDLKRFPQFRKAQRHAVTLSPGQVLFVPRHWWHYVESIDPVTVSINSW 272
           S+++V NPDL++FP+F KA   +  LSPG++LF+P  +WHYV ++D ++ S++ W
Sbjct: 361 SQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALD-LSFSVSFW 414


>gi|148596936 hypoxia-inducible factor 1, alpha subunit inhibitor
           [Homo sapiens]
          Length = 349

 Score = 85.9 bits (211), Expect = 8e-17
 Identities = 78/302 (25%), Positives = 124/302 (41%), Gaps = 35/302 (11%)

Query: 32  KAKEIIMSLQQPAIFCNMVFDWPARHWNAKYLSQVLHGKQIRFRMGM---------KSMS 82
           +A+E+I + ++P +  +    +PA  W+ +YL + +                    K M+
Sbjct: 51  RAEELIEN-EEPVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMA 109

Query: 83  TVPQFETTCNYVEATLEEFLTWNCDQSSISGPFRDYDHSKFWAYADYKYFVSLFEDKTDL 142
               F+   N  E    EF+    D     G  R Y           K  +         
Sbjct: 110 NFQNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGRKIVMD-------- 161

Query: 143 FQDVKWSDFGFP-GRNG----QESTLWIGSLGAHTPCHLDSYGCNLVFQVQGRKRWHLFP 197
           F    W+      G+ G      + L IG  G  TP H D    N   Q++G KR  LFP
Sbjct: 162 FLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVTPAHYDEQQ-NFFAQIKGYKRCILFP 220

Query: 198 PEDTPFLYPTRIPYEESSVFSKINVVNPDLKRFPQFRKAQRHAVTLSPGQVLFVPRHWWH 257
           P+    LYP  + +      S+++  NPD +RFP F+    +   + PG VL++P +WWH
Sbjct: 221 PDQFECLYPYPV-HHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWH 279

Query: 258 YVESI--DPVTVSINSWIE-------LEEDHLARVEEAITRMLVCALKTA-ENPQNTRAW 307
           ++ES+    +T+++N W +       +E    A  + AI R +   L  A  NPQ     
Sbjct: 280 HIESLLNGGITITVNFWYKGAPTPKRIEYPLKAHQKVAIMRNIEKMLGEALGNPQEVGPL 339

Query: 308 LN 309
           LN
Sbjct: 340 LN 341


>gi|89242134 hypothetical protein LOC129450 [Homo sapiens]
          Length = 315

 Score = 75.9 bits (185), Expect = 8e-14
 Identities = 70/216 (32%), Positives = 101/216 (46%), Gaps = 32/216 (14%)

Query: 58  WNAKYLSQVLHGKQIRFRMGMKSMSTVPQFE-TTCNYVEATLEEFLTWNCDQSSISGPFR 116
           W   YLSQV   K+++  +     + V Q +  + N+V  TL        DQ  +     
Sbjct: 44  WTVDYLSQVGGKKEVKIHV-----AAVAQMDFISKNFVYRTLP------FDQ--LVQRAA 90

Query: 117 DYDHSKFWAYADYKYFV-SLFEDKTDLFQDVKWS------DFGFPGRNGQE----STLWI 165
           +  H +F+   D KY++ SL ED      D++        D  FP    +E    S   I
Sbjct: 91  EEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRKQFPLLKGDIKFPEFFKEEQFFSSVFRI 150

Query: 166 GSLGAHTPCHLDSYGCNLVFQVQGRKRWHLFPPEDTPFLYPTRIPYEESSVFSKINVVNP 225
            S G     H D    NL+ QV G+KR  LF P D  +LY   +   +S V   +N+ NP
Sbjct: 151 SSPGLQLWTHYDVMD-NLLIQVTGKKRVVLFSPRDAQYLY---LKGTKSEV---LNIDNP 203

Query: 226 DLKRFPQFRKAQRHAVTLSPGQVLFVPRHWWHYVES 261
           DL ++P F KA+R+  +L  G VLF+P  W+H V S
Sbjct: 204 DLAKYPLFSKARRYECSLEAGDVLFIPALWFHNVIS 239


>gi|167860114 jumonji domain containing 7 [Homo sapiens]
          Length = 316

 Score = 66.2 bits (160), Expect = 6e-11
 Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 21/156 (13%)

Query: 141 DLFQDVKWSDFGFPGRNGQESTLWIGSLGAHTPCHLDSYGCNLVFQVQGRKRWHLFPPED 200
           DL   V W+     G+       W+G   A T  H D Y  NL   V G K +   PP D
Sbjct: 145 DLESHVPWASEAL-GKMPDAVNFWLGEAAAVTSLHKDHYE-NLYCVVSGEKHFLFHPPSD 202

Query: 201 TPFL-----YPTRIPYEESSVFSKINV-------------VNPDLKRFPQFRKAQRHAVT 242
            PF+      P      E   F  ++              + PDL R+P + +AQ    T
Sbjct: 203 RPFIPYELYTPATYQLTEEGTFKVVDEEAMEKVPWIPLDPLAPDLARYPSYSQAQALRCT 262

Query: 243 LSPGQVLFVPRHWWHYVESIDPVTVSINSWIELEED 278
           +  G++L++P  W+H+V+      +++N W ++E D
Sbjct: 263 VRAGEMLYLPALWFHHVQQ-SQGCIAVNFWYDMEYD 297


>gi|56090146 jumonji domain containing 8 [Homo sapiens]
          Length = 285

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 14/128 (10%)

Query: 136 FEDKTDLFQDVKWSDFGFPGRNGQESTLWIGSLGAHTPCHLDSYGCNLVFQVQGRKRWHL 195
           F +   LF+      FG  G      +  I   G+  P H    G + V  + GRKRW L
Sbjct: 162 FTEWASLFRHYSPPPFGLLG-TAPAYSFGIAGAGSGVPFHWHGPGYSEV--IYGRKRWFL 218

Query: 196 FPPEDTPFLYPTRIPYEESSVFSKINVVNPDLKRFPQFRKAQRHAVTLSPGQVLFVPRHW 255
           +PPE TP  +P +      +  + +    P L   P  R  +    T+  G+VL+ P  W
Sbjct: 219 YPPEKTPEFHPNK------TTLAWLRDTYPALP--PSARPLE---CTIRAGEVLYFPDRW 267

Query: 256 WHYVESID 263
           WH   ++D
Sbjct: 268 WHATLNLD 275


>gi|125988395 jumonji domain containing 6 isoform 1 [Homo sapiens]
          Length = 414

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 56/243 (23%), Positives = 95/243 (39%), Gaps = 41/243 (16%)

Query: 42  QPAIFCNMVFDWPARH-WNAKYLSQVLHGKQIRFRMGMKSMSTVPQFETTCNYVEATLEE 100
           +P +  N    W A+  W  + L +    ++ +        S   + +    Y+E+T ++
Sbjct: 68  KPVVLLNAQEGWSAQEKWTLERLKRKYRNQKFKCGEDNDGYSVKMKMKYYIEYMESTRDD 127

Query: 101 FLTWNCDQSSISGPFR-----DYDHSKFWAYADYKYFVSLFEDKTDLFQDVKWSDFGFPG 155
              +  D S    P R     DY   KF+                DLFQ        + G
Sbjct: 128 SPLYIFDSSYGEHPKRRKLLEDYKVPKFFT--------------DDLFQ--------YAG 165

Query: 156 RNGQESTLW--IGSLGAHTPCHLDSYGCNLVFQ-VQGRKRWHLFP---PEDTPFLYPTRI 209
              +    W  +G   + T  H+D  G +     VQG KRW LFP   P +   +     
Sbjct: 166 EKRRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEG 225

Query: 210 PYEESSVFSKINVVNPDLKRF---PQFRKAQRHAVTLSPGQVLFVPRHWWHYVESIDPVT 266
             ++    +  NV+ P  +     P+F+  +   +   PG+ +FVP  WWH V ++D  T
Sbjct: 226 GNQQDEAITWFNVIYPRTQLPTWPPEFKPLE---ILQKPGETVFVPGGWWHVVLNLD-TT 281

Query: 267 VSI 269
           ++I
Sbjct: 282 IAI 284


>gi|125988389 jumonji domain containing 6 isoform 2 [Homo sapiens]
          Length = 403

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 56/243 (23%), Positives = 95/243 (39%), Gaps = 41/243 (16%)

Query: 42  QPAIFCNMVFDWPARH-WNAKYLSQVLHGKQIRFRMGMKSMSTVPQFETTCNYVEATLEE 100
           +P +  N    W A+  W  + L +    ++ +        S   + +    Y+E+T ++
Sbjct: 68  KPVVLLNAQEGWSAQEKWTLERLKRKYRNQKFKCGEDNDGYSVKMKMKYYIEYMESTRDD 127

Query: 101 FLTWNCDQSSISGPFR-----DYDHSKFWAYADYKYFVSLFEDKTDLFQDVKWSDFGFPG 155
              +  D S    P R     DY   KF+                DLFQ        + G
Sbjct: 128 SPLYIFDSSYGEHPKRRKLLEDYKVPKFFT--------------DDLFQ--------YAG 165

Query: 156 RNGQESTLW--IGSLGAHTPCHLDSYGCNLVFQ-VQGRKRWHLFP---PEDTPFLYPTRI 209
              +    W  +G   + T  H+D  G +     VQG KRW LFP   P +   +     
Sbjct: 166 EKRRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEG 225

Query: 210 PYEESSVFSKINVVNPDLKRF---PQFRKAQRHAVTLSPGQVLFVPRHWWHYVESIDPVT 266
             ++    +  NV+ P  +     P+F+  +   +   PG+ +FVP  WWH V ++D  T
Sbjct: 226 GNQQDEAITWFNVIYPRTQLPTWPPEFKPLE---ILQKPGETVFVPGGWWHVVLNLD-TT 281

Query: 267 VSI 269
           ++I
Sbjct: 282 IAI 284


>gi|239788849 jumonji domain containing 4 isoform 2 [Homo sapiens]
          Length = 447

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 34/148 (22%)

Query: 163 LWIGSLGAHTPCHLDSY-GCNLVFQVQGRKRWHLFPPEDTPFLYPTR--IPYEESS---- 215
           ++ G  G+ +P H D +   +    V GRK+W LFPP     L      +PY+ +S    
Sbjct: 223 VYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEALRDRHGNLPYDVTSPALC 282

Query: 216 ---VFSKINVVNPDLKRFPQFRKAQRHAVTLSPGQVLFVPRHWWHYVESIDPVTVSI--- 269
              +  +  +  P L+            +T   G+++FVP  W H V ++D  T+SI   
Sbjct: 283 DTHLHPRNQLAGPPLE------------ITQEAGEMVFVPSGWHHQVHNLDD-TISINHN 329

Query: 270 --------NSWIELEEDHLARVEEAITR 289
                   N W  L+++  A  EE I R
Sbjct: 330 WVNGFNLANMWRFLQQELCAVQEEVIMR 357


>gi|239788847 jumonji domain containing 4 isoform 1 [Homo sapiens]
          Length = 463

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 24/122 (19%)

Query: 163 LWIGSLGAHTPCHLDSY-GCNLVFQVQGRKRWHLFPPEDTPFLYPTR--IPYEESS---- 215
           ++ G  G+ +P H D +   +    V GRK+W LFPP     L      +PY+ +S    
Sbjct: 223 VYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEALRDRHGNLPYDVTSPALC 282

Query: 216 ---VFSKINVVNPDLKRFPQFRKAQRHAVTLSPGQVLFVPRHWWHYVESIDPVTVSIN-S 271
              +  +  +  P L+            +T   G+++FVP  W H V ++D  T+SIN +
Sbjct: 283 DTHLHPRNQLAGPPLE------------ITQEAGEMVFVPSGWHHQVHNLDD-TISINHN 329

Query: 272 WI 273
           W+
Sbjct: 330 WV 331


>gi|4826914 JMJD7-PLA2G4B protein [Homo sapiens]
          Length = 1012

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 7/72 (9%)

Query: 141 DLFQDVKWSDFGFPGRNGQESTLWIGSLGAHTPCHLDSYGCNLVFQVQGRKRWHLFPPED 200
           DL   V W+     G+       W+G   A T  H D Y  NL   V G K +   PP D
Sbjct: 145 DLESHVPWASEAL-GKMPDAVNFWLGEAAAVTSLHKDHYE-NLYCVVSGEKHFLFHPPSD 202

Query: 201 TPFLYPTRIPYE 212
            PF     IPYE
Sbjct: 203 RPF-----IPYE 209


>gi|106879206 chromosome 14 open reading frame 169 [Homo sapiens]
          Length = 641

 Score = 36.6 bits (83), Expect = 0.053
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 16/82 (19%)

Query: 184 VFQVQGRKRWHLFPPEDTPFLYPTRIPYEESSVFSKINVVNPDLKRFPQFRKAQRHAVTL 243
           V Q++GRK W ++ P         R+P EE ++ S  N    DL   P  +        L
Sbjct: 348 VLQLEGRKLWRVYRP---------RVPTEELALTSSPNFSQDDLGE-PVLQ------TVL 391

Query: 244 SPGQVLFVPRHWWHYVESIDPV 265
            PG +L+ PR + H  E  D V
Sbjct: 392 EPGDLLYFPRGFIHQAECQDGV 413


>gi|16753205 ubiquilin 1 isoform 2 [Homo sapiens]
          Length = 561

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 25/129 (19%)

Query: 352 EHMKKEELNVCNHMEVGQTGSQNLTTGTDKPEAASPFGPDLVPVAQRSEEPPSERGGIFG 411
           +H  ++     +++    T + N T+G+     ++PFG                 GG+ G
Sbjct: 114 DHSAQQTNTAGSNVTTSSTPNSNSTSGS---ATSNPFG----------------LGGLGG 154

Query: 412 SDGKDFVDKDGEHFGKLHCAKRQQIMSNSENAIEEQIASNTTTTPQTFISTDDLLDCLV- 470
             G   +  +  +F +L    ++Q++SN E  +  QI  N     Q+ +S  DL+  L+ 
Sbjct: 155 LAGLSSLGLNTTNFSELQSQMQRQLLSNPEMMV--QIMENPFV--QSMLSNPDLMRQLIM 210

Query: 471 -NPQVTRIV 478
            NPQ+ +++
Sbjct: 211 ANPQMQQLI 219


>gi|16753203 ubiquilin 1 isoform 1 [Homo sapiens]
          Length = 589

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 25/129 (19%)

Query: 352 EHMKKEELNVCNHMEVGQTGSQNLTTGTDKPEAASPFGPDLVPVAQRSEEPPSERGGIFG 411
           +H  ++     +++    T + N T+G+     ++PFG                 GG+ G
Sbjct: 114 DHSAQQTNTAGSNVTTSSTPNSNSTSGS---ATSNPFG----------------LGGLGG 154

Query: 412 SDGKDFVDKDGEHFGKLHCAKRQQIMSNSENAIEEQIASNTTTTPQTFISTDDLLDCLV- 470
             G   +  +  +F +L    ++Q++SN E  +  QI  N     Q+ +S  DL+  L+ 
Sbjct: 155 LAGLSSLGLNTTNFSELQSQMQRQLLSNPEMMV--QIMENPFV--QSMLSNPDLMRQLIM 210

Query: 471 -NPQVTRIV 478
            NPQ+ +++
Sbjct: 211 ANPQMQQLI 219


>gi|4507681 thyrotropin-releasing hormone receptor [Homo sapiens]
          Length = 398

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 8/64 (12%)

Query: 286 AITRMLVCALKTAENPQNTRAWLNPTEVEETSH--------AVNCCYLNAAVSAFFDRCR 337
           A  ++  C  K  E P N    LN + ++E+ H         V   YL+A   +F D C 
Sbjct: 330 AFRKLCNCKQKPTEKPANYSVALNYSVIKESDHFSTELDDITVTDTYLSATKVSFDDTCL 389

Query: 338 TSEV 341
            SEV
Sbjct: 390 ASEV 393


>gi|41281453 serine/threonine kinase 2 [Homo sapiens]
          Length = 1235

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 16/59 (27%), Positives = 30/59 (50%)

Query: 325 LNAAVSAFFDRCRTSEVVEIQALRTDGEHMKKEELNVCNHMEVGQTGSQNLTTGTDKPE 383
           LN ++S+F  + + S  + +Q  R   + +KK    + + +EV  T S+ +T    K E
Sbjct: 763 LNLSISSFLSKTKDSGSISLQETRRQKKTLKKTRKFIVDGVEVSVTTSKIVTDSDSKTE 821


>gi|24415404 MDN1, midasin homolog [Homo sapiens]
          Length = 5596

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 24/90 (26%), Positives = 35/90 (38%), Gaps = 13/90 (14%)

Query: 366  EVGQTGSQNLTTGTDKPEAASPFGPDLVPVAQRSEEPPSERGGIFGSD----GKDFVDKD 421
            E G    +   T TD+ E+ SP         Q  EE PSE     G +    G D  D D
Sbjct: 4917 EAGHEAEERGETETDQNESQSP---------QEPEEGPSEDDKAEGEEEMDTGADDQDGD 4967

Query: 422  GEHFGKLHCAKRQQIMSNSENAIEEQIASN 451
                 + H  ++QQ +   +   +E+   N
Sbjct: 4968 AAQHPEEHSEEQQQSVEEKDKEADEEGGEN 4997


>gi|24429588 zinc finger protein 532 [Homo sapiens]
          Length = 1301

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 3/99 (3%)

Query: 310 PTEVEETSHAVNCCYLNAAVSAFFDRCRTSEVVEIQALRTDGEHMKKEELNVCNHMEVGQ 369
           P++ + +S   +C    AA+SA   +  +    E  A   +   + KE +N         
Sbjct: 258 PSKTKSSSKLSSCIAAIAALSA--KKAASDSCKEPVANSRESSPLPKE-VNDSPRAADKS 314

Query: 370 TGSQNLTTGTDKPEAASPFGPDLVPVAQRSEEPPSERGG 408
             SQNL  GT KP    P  P  +     S+  PS   G
Sbjct: 315 PESQNLIDGTKKPSLKQPDSPRSISSENSSKGSPSSPAG 353


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,949,087
Number of Sequences: 37866
Number of extensions: 918746
Number of successful extensions: 2182
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2156
Number of HSP's gapped (non-prelim): 20
length of query: 488
length of database: 18,247,518
effective HSP length: 106
effective length of query: 382
effective length of database: 14,233,722
effective search space: 5437281804
effective search space used: 5437281804
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.