Guide to the Human Genome
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Name: MAPK9 Sequence: fasta or formatted (242aa) NCBI GI: 205277412
Description:

mitogen-activated protein kinase 9 isoform JNK2 gamma

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [424aa] mitogen-activated protein kinase 9 isoform JNK2 alpha2
alt prot [382aa] mitogen-activated protein kinase 9 isoform JNK2 alpha1
alt prot [382aa] mitogen-activated protein kinase 9 isoform JNK2 beta1
alt prot [424aa] mitogen-activated protein kinase 9 isoform JNK2 beta2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         13           2
 C cysteine            3.7          9           1
 D aspartate           5.4         13           1
 E glutamate           3.7          9           2
 F phenylalanine       3.7          9           1
 G glycine             5.8         14           1
 H histidine           2.9          7           1
 I isoleucine          6.6         16           2
 K lysine              6.2         15           2
 L leucine            11.2         27           2
 M methionine          4.5         11           2
 N asparagine          3.7          9           1
 P proline             3.3          8           1
 Q glutamine           5.0         12           2
 R arginine            4.5         11           1
 S serine              5.8         14           1
 T threonine           5.0         12           1
 V valine              9.1         22           2
 W tryptophan          0.4          1           1
 Y tyrosine            4.1         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase 9 isoform JNK2 gam... 
MAPK9                 0.951   mitogen-activated protein kinase 9 isoform JNK2 alph...
MAPK9                 0.951   mitogen-activated protein kinase 9 isoform JNK2 alph...
MAPK9                 0.908   mitogen-activated protein kinase 9 isoform JNK2 beta...
MAPK9                 0.908   mitogen-activated protein kinase 9 isoform JNK2 beta...
MAPK10                0.847   mitogen-activated protein kinase 10 isoform 1 
MAPK10                0.847   mitogen-activated protein kinase 10 isoform 2 
MAPK10                0.847   mitogen-activated protein kinase 10 isoform 3 
MAPK8                 0.845   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK8                 0.845   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK8                 0.824   mitogen-activated protein kinase 8 isoform JNK1 alph...
MAPK8                 0.824   mitogen-activated protein kinase 8 isoform JNK1 alpha...
MAPK14                0.492   mitogen-activated protein kinase 14 isoform 3 
MAPK14                0.492   mitogen-activated protein kinase 14 isoform 1 
MAPK14                0.492   mitogen-activated protein kinase 14 isoform 4 
MAPK14                0.492   mitogen-activated protein kinase 14 isoform 2 
MAPK12                0.469   mitogen-activated protein kinase 12 
MAPK13                0.460   mitogen-activated protein kinase 13 
MAPK11                0.460   mitogen-activated protein kinase 11 
MAPK10                0.443   mitogen-activated protein kinase 10 isoform 4 
MAPK7                 0.359   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.359   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.359   mitogen-activated protein kinase 7 isoform 1 
MAPK1                 0.353   mitogen-activated protein kinase 1 
MAPK1                 0.353   mitogen-activated protein kinase 1 
MAPK3                 0.346   mitogen-activated protein kinase 3 isoform 3 
MAPK3                 0.346   mitogen-activated protein kinase 3 isoform 2 
MAPK3                 0.346   mitogen-activated protein kinase 3 isoform 1 
NLK                   0.316   nemo like kinase 
MAPK15                0.286   mitogen-activated protein kinase 15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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